View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10233A_low_321 (Length: 228)

Name: NF10233A_low_321
Description: NF10233A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10233A_low_321
NF10233A_low_321
[»] chr2 (5 HSPs)
chr2 (43-223)||(25131019-25131200)
chr2 (31-208)||(22280503-22280681)
chr2 (58-190)||(25878528-25878661)
chr2 (31-157)||(24829108-24829233)
chr2 (58-157)||(12638821-12638920)
[»] scaffold0962 (1 HSPs)
scaffold0962 (40-208)||(2379-2547)
[»] chr8 (6 HSPs)
chr8 (31-223)||(23902995-23903188)
chr8 (48-173)||(20650161-20650286)
chr8 (43-208)||(21194322-21194488)
chr8 (31-205)||(22437123-22437298)
chr8 (31-190)||(24931616-24931772)
chr8 (58-223)||(21848092-21848258)
[»] scaffold0561 (1 HSPs)
scaffold0561 (40-223)||(6319-6504)
[»] chr7 (8 HSPs)
chr7 (40-223)||(4442692-4442876)
chr7 (40-228)||(13458800-13458987)
chr7 (38-97)||(22034828-22034887)
chr7 (58-208)||(27173064-27173215)
chr7 (58-208)||(7826683-7826834)
chr7 (58-208)||(27105110-27105261)
chr7 (31-101)||(17926375-17926445)
chr7 (176-225)||(17131574-17131623)
[»] chr1 (7 HSPs)
chr1 (20-225)||(20171933-20172139)
chr1 (31-208)||(41215255-41215433)
chr1 (30-108)||(21200454-21200532)
chr1 (43-223)||(22133136-22133317)
chr1 (58-208)||(20828791-20828942)
chr1 (31-208)||(20527835-20528013)
chr1 (34-173)||(20927839-20927978)
[»] chr6 (10 HSPs)
chr6 (31-173)||(23025269-23025411)
chr6 (58-208)||(16379845-16379996)
chr6 (58-208)||(16647441-16647592)
chr6 (43-187)||(18401288-18401433)
chr6 (58-208)||(1646286-1646437)
chr6 (31-208)||(16100646-16100824)
chr6 (90-173)||(18578111-18578194)
chr6 (31-187)||(16234990-16235146)
chr6 (73-157)||(18836181-18836265)
chr6 (115-190)||(19985694-19985770)
[»] scaffold0467 (1 HSPs)
scaffold0467 (31-223)||(936-1129)
[»] scaffold0342 (1 HSPs)
scaffold0342 (43-190)||(3291-3439)
[»] scaffold0021 (4 HSPs)
scaffold0021 (25-208)||(90292-90476)
scaffold0021 (31-108)||(21285-21362)
scaffold0021 (31-108)||(30861-30938)
scaffold0021 (31-208)||(7953-8131)
[»] scaffold0058 (2 HSPs)
scaffold0058 (37-107)||(77226-77296)
scaffold0058 (144-217)||(77339-77413)
[»] scaffold0112 (1 HSPs)
scaffold0112 (31-223)||(3296-3488)
[»] chr3 (11 HSPs)
chr3 (48-187)||(6150440-6150580)
chr3 (35-137)||(3296012-3296114)
chr3 (58-187)||(15612525-15612655)
chr3 (48-208)||(17201048-17201209)
chr3 (58-208)||(30149780-30149931)
chr3 (31-157)||(12795963-12796089)
chr3 (58-187)||(13964939-13965069)
chr3 (71-208)||(15948037-15948175)
chr3 (76-173)||(8272001-8272098)
chr3 (58-190)||(30140229-30140362)
chr3 (33-157)||(18915455-18915579)
[»] scaffold0028 (1 HSPs)
scaffold0028 (48-190)||(93788-93931)
[»] chr5 (3 HSPs)
chr5 (58-208)||(24583918-24584069)
chr5 (58-208)||(21934697-21934848)
chr5 (58-173)||(23508392-23508507)
[»] chr4 (4 HSPs)
chr4 (30-223)||(12340179-12340373)
chr4 (90-208)||(15290485-15290604)
chr4 (43-208)||(14999425-14999591)
chr4 (91-187)||(9292993-9293090)
[»] scaffold0465 (1 HSPs)
scaffold0465 (31-187)||(12976-13133)
[»] scaffold0225 (1 HSPs)
scaffold0225 (58-208)||(26219-26370)
[»] scaffold0170 (1 HSPs)
scaffold0170 (58-173)||(34908-35023)
[»] scaffold0141 (1 HSPs)
scaffold0141 (58-208)||(23786-23937)
[»] scaffold0011 (3 HSPs)
scaffold0011 (23-225)||(175826-176029)
scaffold0011 (43-208)||(73927-74093)
scaffold0011 (43-208)||(78308-78474)
[»] scaffold0673 (1 HSPs)
scaffold0673 (31-208)||(5634-5812)
[»] scaffold0610 (1 HSPs)
scaffold0610 (31-173)||(4268-4410)
[»] scaffold0218 (1 HSPs)
scaffold0218 (48-208)||(1282-1443)
[»] scaffold0124 (1 HSPs)
scaffold0124 (58-208)||(5136-5287)
[»] scaffold0462 (1 HSPs)
scaffold0462 (43-173)||(2530-2660)
[»] scaffold0244 (1 HSPs)
scaffold0244 (90-187)||(24916-25014)
[»] scaffold0233 (1 HSPs)
scaffold0233 (97-225)||(21039-21168)
[»] scaffold0139 (1 HSPs)
scaffold0139 (31-187)||(17699-17855)
[»] scaffold0120 (1 HSPs)
scaffold0120 (43-172)||(24986-25115)
[»] scaffold0102 (1 HSPs)
scaffold0102 (114-170)||(46452-46508)
[»] scaffold0335 (1 HSPs)
scaffold0335 (31-157)||(10760-10887)
[»] scaffold0302 (1 HSPs)
scaffold0302 (58-173)||(1034-1149)
[»] scaffold0269 (1 HSPs)
scaffold0269 (90-173)||(2333-2416)
[»] scaffold0266 (1 HSPs)
scaffold0266 (90-173)||(7227-7310)
[»] scaffold0162 (1 HSPs)
scaffold0162 (31-173)||(15706-15848)
[»] scaffold0008 (1 HSPs)
scaffold0008 (71-172)||(131856-131957)
[»] scaffold1486 (1 HSPs)
scaffold1486 (25-173)||(297-445)
[»] scaffold1164 (1 HSPs)
scaffold1164 (144-223)||(2294-2374)
[»] scaffold0023 (1 HSPs)
scaffold0023 (25-173)||(53977-54125)


Alignment Details
Target: chr2 (Bit Score: 74; Significance: 4e-34; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 43 - 223
Target Start/End: Original strand, 25131019 - 25131200
Alignment:
Q  43 gttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggt 142  Q
    |||||||||||||||||||| |||||  |||| ||||||| || ||||||||||||||| ||||||  |  ||||||||||||||  | ||| ||||| |    
T  25131019 gttatactcttggttaaacaattaatgctaaccccaaaagataacatccaatccataccaaaaatcacatccatatgcttcaacggaagacacacaagat 25131118  T
Q  143 acaactcaaaatcaatattaccgaaattaac-gtacacttagcacaaactaaggaaatagtcaccgagccattggccggggt 223  Q
     ||||||||||||||||||||| |||||||| |  ||||||||||| ||||||||| |||||||||| ||| | ||||||||    
T  25131119 ccaactcaaaatcaatattaccaaaattaacagggcacttagcacacactaaggaagtagtcaccgaaccactagccggggt 25131200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 208
Target Start/End: Original strand, 22280503 - 22280681
Alignment:
Q  31 ggcttagagaatgttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgaca 130  Q
    |||||||| || |||| |||||| || ||||| |||||  |||| ||||||| || || |||||||||||| ||||||  |  ||||||||||||||  |    
T  22280503 ggcttagaaaaagttacactcttagtcaaacaattaatgctaaccccaaaagctaacaaccaatccataccaaaaatcacatccatatgcttcaacggaa 22280602  T
Q  131 aacaaacaaggtacaactcaaaatcaatattaccgaaattaac-gtacacttagcacaaactaaggaaatagtcaccga 208  Q
     ||||||||| | |||||||||||||| |||||| |||||||| | |||||||||||| |  || ||| ||||||||||    
T  22280603 gacaaacaagatccaactcaaaatcaacattacctaaattaacaggacacttagcacacataaaagaagtagtcaccga 22280681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 190
Target Start/End: Complemental strand, 25878661 - 25878528
Alignment:
Q  58 aaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggtacaactcaaaatcaa 157  Q
    ||||| |||||  |||| |||||||||| || ||||| |||||| ||||||  |  ||||||||||||||  | ||| ||||| | ||||||||||||||    
T  25878661 aaacaattaatgctaaccccaaaagttaacaaccaattcataccaaaaatcacatccatatgcttcaacggaagacacacaagatccaactcaaaatcaa 25878562  T
Q  158 tattaccgaaattaac-gtacacttagcacaaac 190  Q
     |||||| |||||||| | ||||||| |||||||    
T  25878561 cattaccaaaattaacaggacacttaacacaaac 25878528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 24829233 - 24829108
Alignment:
Q  31 ggcttagagaatgttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgaca 130  Q
    |||||||| || |||| |||||| || ||||| |||||  |||| ||||||| || || |||||||||||| ||||||  | |||||||||||||||  |    
T  24829233 ggcttagaaaacgttacactcttagtcaaacaattaatgctaaccccaaaagctaacaaccaatccataccaaaaatcacattcatatgcttcaacggaa 24829134  T
Q  131 aacaaacaaggtacaactcaaaatcaa 157  Q
     ||||| ||| | ||||||||||||||    
T  24829133 gacaaa-aagatccaactcaaaatcaa 24829108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 157
Target Start/End: Complemental strand, 12638920 - 12638821
Alignment:
Q  58 aaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggtacaactcaaaatcaa 157  Q
    ||||| |||||  |||| ||||||| || ||||||||||||||| ||||||  |  ||||||||||||||  | ||||||||  | ||||||||||||||    
T  12638920 aaacaattaatggtaaccccaaaagctaacatccaatccataccaaaaatcacatccatatgcttcaacggaagacaaacaaaatccaactcaaaatcaa 12638821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 40 - 208
Target Start/End: Original strand, 2379 - 2547
Alignment:
Q  40 aatgttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaa 139  Q
    |||||||||||||||||||||||||||||  |||||||| |||  | ||||||||||||||| ||||||  || ||||||||| ||||| | ||| ||||    
T  2379 aatgttatactcttggttaaacagttaatgctaacaccagaagacaacatccaatccataccaaaaatcacacccatatgctttaacga-agacacacaa 2477  T
Q  140 ggtacaactcaaaatcaatattaccgaaattaa-cgtacacttagcacaaactaaggaaatagtcaccga 208  Q
    | | |||||||||||||| |||||| |||||||  | |||||||||||| ||||||||| ||||||||||    
T  2478 gatccaactcaaaatcaaaattaccaaaattaataggacacttagcacacactaaggaagtagtcaccga 2547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 1e-31; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 31 - 223
Target Start/End: Original strand, 23902995 - 23903188
Alignment:
Q  31 ggcttagagaatgttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgaca 130  Q
    ||||| || |||||||||||||||||||| ||||||||  ||||||||||||  | ||||||||||||||  ||||||  |  ||||||||||||||  |    
T  23902995 ggcttcgaaaatgttatactcttggttaagcagttaatgctaacaccaaaagacaacatccaatccatacaaaaaatcacatccatatgcttcaacggaa 23903094  T
Q  131 aacaaacaaggtacaactcaaaatcaatattaccgaaattaac-gtacacttagcacaaactaaggaaatagtcaccgagccattggccggggt 223  Q
     ||| ||||| | |||||||||||||| ||| || |||||||| | |||||||||||| ||||||||| |||||||||| ||| | ||||||||    
T  23903095 gacacacaagatccaactcaaaatcaacatttccaaaattaacaggacacttagcacacactaaggaagtagtcaccgaaccactagccggggt 23903188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 173
Target Start/End: Complemental strand, 20650286 - 20650161
Alignment:
Q  48 actcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggtacaac 147  Q
    |||||| || ||||| |||||  |||| |||||||||| || |||||||||||| ||||||  |  ||||||||||||||  | ||| ||||| | ||||    
T  20650286 actcttagtcaaacaattaatgctaaccccaaaagttaacaaccaatccataccaaaaatcacatccatatgcttcaacggaagacacacaagatccaac 20650187  T
Q  148 tcaaaatcaatattaccgaaattaac 173  Q
    |||||||||| |||||| ||||||||    
T  20650186 tcaaaatcaacattaccaaaattaac 20650161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 208
Target Start/End: Complemental strand, 21194488 - 21194322
Alignment:
Q  43 gttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggt 142  Q
    |||| |||||| || ||||| |||||  |||| ||||||  || || |||||||||||| ||||||  |  ||||||||||||||  | ||| ||||| |    
T  21194488 gttacactcttagtcaaacaattaatgctaaccccaaaaaataacaaccaatccataccaaaaatcacatccatatgcttcaacggaagacacacaagat 21194389  T
Q  143 acaactcaaaatcaatattaccgaaattaac-gtacacttagcacaaactaaggaaatagtcaccga 208  Q
     |||||||||||||| |||||| |||||||| | |||||||||||| |  || ||| ||||||||||    
T  21194388 ccaactcaaaatcaacattaccaaaattaacaggacacttagcacacataaaagaagtagtcaccga 21194322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 205
Target Start/End: Original strand, 22437123 - 22437298
Alignment:
Q  31 ggcttagagaatgttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgaca 130  Q
    ||||| || ||||||| ||| ||||| ||||| |||||  |||| ||||||| || ||| ||||||||||  ||||||  |  |||||| ||||| |  |    
T  22437123 ggcttcgaaaatgttacacttttggtcaaacaattaatgctaaccccaaaagataacattcaatccatacaaaaaatcacatccatatgattcaatggaa 22437222  T
Q  131 aacaaacaaggtacaactcaaaatcaatattaccgaaattaacgt-acacttagcacaaactaaggaaatagtcac 205  Q
     ||| ||||| |  ||||||||||||| |||||| |||||||| | |||||||||||| ||||| ||| |||||||    
T  22437223 gacacacaagatctaactcaaaatcaacattaccaaaattaacatgacacttagcacacactaaagaagtagtcac 22437298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 190
Target Start/End: Complemental strand, 24931772 - 24931616
Alignment:
Q  31 ggcttagagaatgttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgaca 130  Q
    |||||||| || || | |||||| || ||||| |||||  |||| ||||||| || || |||||||||||| ||||||  |  ||||||||||||||  |    
T  24931772 ggcttagaaaaagtcacactcttagtcaaacaattaatgctaaccccaaaagctaacaaccaatccataccaaaaatcacatccatatgcttcaacggaa 24931673  T
Q  131 aacaaacaaggtacaactcaaaatcaatattaccgaaattaac-gtacacttagcacaaac 190  Q
    |||||    | | |||||||||||||| |||||| |||||||| | |||||||||||||||    
T  24931672 aacaa----gatccaactcaaaatcaacattaccaaaattaacaggacacttagcacaaac 24931616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 223
Target Start/End: Complemental strand, 21848258 - 21848092
Alignment:
Q  58 aaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggtacaactcaaaatcaa 157  Q
    ||||| |||||  |||| ||||||| || || |||||||||||| |||||   |  ||||||||||||||  | ||||||||| | ||||||||||||||    
T  21848258 aaacaattaatgctaaccccaaaagctaacaaccaatccataccaaaaataacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaa 21848159  T
Q  158 tattaccgaaattaac-gtacacttagcacaaactaaggaaatagtcaccgagccattggccggggt 223  Q
     || | | |||||||| | |||||||||||| |  || ||| |||||||||| ||| | ||||||||    
T  21848158 catcaacaaaattaacaggacacttagcacacataaacgaagtagtcaccgaaccactagccggggt 21848092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 40 - 223
Target Start/End: Complemental strand, 6504 - 6319
Alignment:
Q  40 aatgttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaa 139  Q
    |||||||||||||||||||||||||||||  ||||||||||||  | ||||||||||||||| ||||||  |  ||||||||||||||  | ||| ||||    
T  6504 aatgttatactcttggttaaacagttaatgctaacaccaaaagacaacatccaatccataccaaaaatcacatccatatgcttcaacggaacacacacaa 6405  T
Q  140 ggtacaactcaaaatcaatattacc-gaaattaac-gtacacttagcacaaactaaggaaatagtcaccgagccattggccggggt 223  Q
    | | |||||||||||||| ||||||  |||||||| |  ||||||||||| ||||||||| ||||||| || ||| | ||||||||    
T  6404 gatccaactcaaaatcaacattaccaaaaattaacagggcacttagcacacactaaggaagtagtcactgaaccactagccggggt 6319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 2e-26; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 40 - 223
Target Start/End: Original strand, 4442692 - 4442876
Alignment:
Q  40 aatgttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaa 139  Q
    ||||||||||||||||| ||||| |||||  |||| ||||||| || |||| |||||||||| ||||||  |  ||||||||||||||  | ||| ||||    
T  4442692 aatgttatactcttggtcaaacaattaatgctaaccccaaaagataacatcaaatccataccaaaaatcacatccatatgcttcaacggaagacacacaa 4442791  T
Q  140 ggtacaactcaaaatcaatattaccgaaattaacgt-acacttagcacaaactaaggaaatagtcaccgagccattggccggggt 223  Q
    | ||||||||||||||||| ||||| |||||| | | |||| ||||||| ||||||||| |||| ||||| ||| | ||||||||    
T  4442792 gatacaactcaaaatcaatgttaccaaaattagcatgacacctagcacacactaaggaagtagttaccgaaccactagccggggt 4442876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 40 - 228
Target Start/End: Original strand, 13458800 - 13458987
Alignment:
Q  40 aatgttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaa 139  Q
    |||||||||||||||||||||||||||||  |||||||||| |  | ||||||||||||||| ||||||  |  |||||| ||||||| || ||| ||||    
T  13458800 aatgttatactcttggttaaacagttaatgctaacaccaaaggacaacatccaatccataccaaaaatcacatccatatggttcaacggcatacacacaa 13458899  T
Q  140 ggtacaactcaaaatcaatattaccgaaattaac-gtacacttagcacaaactaaggaaatagtcaccgagccattggccggggtattga 228  Q
      | |||||||||||||| |||||| |||||||| | |||||||||||  ||||| ||| |||||||| | ||| | |||||||| ||||    
T  13458900 aatccaactcaaaatcaacattaccaaaattaacaggacacttagcac--actaaagaagtagtcacctaaccactagccggggtgttga 13458987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 22034828 - 22034887
Alignment:
Q  38 agaatgttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatcca 97  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| || |||||| ||||    
T  22034828 agaatgttatactcttggttaaacagttaatgttaacaccaaaagataacatccagtcca 22034887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 58 - 208
Target Start/End: Original strand, 27173064 - 27173215
Alignment:
Q  58 aaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggtacaactcaaaatcaa 157  Q
    ||||| |||||  |||| ||||||| || || |||||||||||| ||||||  |  ||||||||||||||  | ||||||||| | ||||||||||||||    
T  27173064 aaacaattaatgctaaccccaaaagctaacaaccaatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaa 27173163  T
Q  158 tattaccgaaattaac-gtacacttagcacaaactaaggaaatagtcaccga 208  Q
     |||||| |||||||| | |||||||||||| |  || ||| ||||||||||    
T  27173164 cattaccaaaattaacaggacacttagcacacataaaagaagtagtcaccga 27173215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 58 - 208
Target Start/End: Original strand, 7826683 - 7826834
Alignment:
Q  58 aaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggtacaactcaaaatcaa 157  Q
    ||||| |||||  |||| ||||||| || || |||||||||||| ||||||  |  ||||||||||||||  | ||||||||| | ||||||||||||||    
T  7826683 aaacaattaatgctaaccccaaaagctaacaaccaatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaa 7826782  T
Q  158 tattaccgaaattaac-gtacacttagcacaaactaaggaaatagtcaccga 208  Q
     || ||| |||||||| | |||||||||||| |  || ||| ||||||||||    
T  7826783 catcaccaaaattaacaggacacttagcacacataaaagaagtagtcaccga 7826834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 58 - 208
Target Start/End: Complemental strand, 27105261 - 27105110
Alignment:
Q  58 aaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggtacaactcaaaatcaa 157  Q
    ||||| |||||  |||| ||||||| || || |||||||||||| ||||||  |  ||||||||||||||  | ||||||||| | ||||||||||||||    
T  27105261 aaacaattaatgctaaccccaaaagctaacaaccaatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaa 27105162  T
Q  158 tattaccgaaattaac-gtacacttagcacaaactaaggaaatagtcaccga 208  Q
     || ||| |||||||| | |||||||||||| |  || ||| ||||||||||    
T  27105161 catcaccaaaattaacaggacacttagcacacataaaagaagtagtcaccga 27105110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 101
Target Start/End: Original strand, 17926375 - 17926445
Alignment:
Q  31 ggcttagagaatgttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccatacc 101  Q
    ||||| || ||||||||||||||| ||||||| |||||  ||||||||||||  | ||| |||||||||||    
T  17926375 ggcttcgaaaatgttatactcttgattaaacaattaatgctaacaccaaaagacaacattcaatccatacc 17926445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 17131574 - 17131623
Alignment:
Q  176 acacttagcacaaactaaggaaatagtcaccgagccattggccggggtat 225  Q
    ||||||| ||||||| |||||| |||||||||||| ||||| ||||||||    
T  17131574 acacttaacacaaaccaaggaagtagtcaccgagctattggtcggggtat 17131623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 4e-25; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 225
Target Start/End: Original strand, 20171933 - 20172139
Alignment:
Q  20 tcccatctattggcttagagaatgttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatg 119  Q
    ||||||||| |||||| |||||||||||||| ||||| ||| | ||||| | ||||| |||||    |||||| ||| |||||||||||  |  |||||     
T  20171933 tcccatctactggcttcgagaatgttatacttttggtcaaaaaattaatgtcaacactaaaagacgacatccagtccttaccgaaaatcacatccatatt 20172032  T
Q  120 cttcaacgacaaacaaacaaggtacaactcaaaatcaatattaccgaaattaac-gtacacttagcacaaactaaggaaatagtcaccgagccattggcc 218  Q
    |  ||||| ||| |||||||| | |||||||||||||| || ||| |||||||| | |||||||||||||||||||||| | | ||||||||||| || |    
T  20172033 caccaacggcaagcaaacaagatccaactcaaaatcaacatcaccaaaattaacaggacacttagcacaaactaaggaagttgccaccgagccatcggtc 20172132  T
Q  219 ggggtat 225  Q
    |||||||    
T  20172133 ggggtat 20172139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 208
Target Start/End: Complemental strand, 41215433 - 41215255
Alignment:
Q  31 ggcttagagaatgttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgaca 130  Q
    ||||| || ||||||||||| || |||||||| |||||  |||| ||||||| || ||||||||| ||||| ||||||  |  ||||||||  ||||  |    
T  41215433 ggcttcgaaaatgttatactattcgttaaacaattaatgctaaccccaaaagataacatccaatcaataccaaaaatcacatccatatgctaaaacggaa 41215334  T
Q  131 aacaaacaaggtacaactcaaaatcaatattaccgaaattaacgt-acacttagcacaaactaaggaaatagtcaccga 208  Q
     ||||||||| | ||||||||||| ||| ||||| |||||||| | |||||||||||| ||||||||| ||||||||||    
T  41215333 gacaaacaagatccaactcaaaattaatgttaccaaaattaacatgacacttagcacacactaaggaagtagtcaccga 41215255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 30 - 108
Target Start/End: Complemental strand, 21200532 - 21200454
Alignment:
Q  30 tggcttagagaatgttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatc 108  Q
    ||||||||||| ||||||||||||||||||| ||||||| ||||||||||||  |||||| ||||||||||| ||||||    
T  21200532 tggcttagagattgttatactcttggttaaatagttaatattaacaccaaaatatagcattcaatccataccaaaaatc 21200454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 223
Target Start/End: Complemental strand, 22133317 - 22133136
Alignment:
Q  43 gttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggt 142  Q
    |||| |||||| || ||||| |||||  |||| ||||||| || ||||||||||||||| ||||||  |  ||||||||||||||  | ||| ||||| |    
T  22133317 gttacactcttagtcaaacatttaatactaaccccaaaagataacatccaatccataccaaaaatcacatccatatgcttcaacggaagacacacaagat 22133218  T
Q  143 acaactcaaaatcaatattaccgaaattaa-cgtacacttagcacaaactaaggaaatagtcaccgagccattggccggggt 223  Q
     |||||||||||||| |||||| |||||||  | ||||||||| || || ||  || |||||||||| ||||| ||||||||    
T  22133217 ccaactcaaaatcaacattaccaaaattaataggacacttagcgcacacaaaacaagtagtcaccgaaccattagccggggt 22133136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 58 - 208
Target Start/End: Complemental strand, 20828942 - 20828791
Alignment:
Q  58 aaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggtacaactcaaaatcaa 157  Q
    ||||| |||||  |||| ||||||| || || |||||||||||| ||||||  |  ||||||||||||||  | ||||||||| | ||||||||||||||    
T  20828942 aaacaattaatgctaaccccaaaagctaacaaccaatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaa 20828843  T
Q  158 tattaccgaaattaac-gtacacttagcacaaactaaggaaatagtcaccga 208  Q
     || ||| |||||||| | |||||||||||| |  || ||| ||||||||||    
T  20828842 catcaccaaaattaacaggacacttagcacacataaaagaagtagtcaccga 20828791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 208
Target Start/End: Original strand, 20527835 - 20528013
Alignment:
Q  31 ggcttagagaatgttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgaca 130  Q
    |||||||| || || | |||||| || ||||| |||||  |||| ||||||| || || |||||||||| | ||||||  |  ||||||||| ||||  |    
T  20527835 ggcttagaaaaagtcacactcttagtcaaacaattaatgctaaccccaaaagctaacaaccaatccatatcaaaaatcacatccatatgctttaacggaa 20527934  T
Q  131 aacaaacaaggtacaactcaaaatcaatattaccgaaattaac-gtacacttagcacaaactaaggaaatagtcaccga 208  Q
     ||||||||| | |||||||||||||| |||||| |||||||| | |||||||||||| |  || ||| ||||||||||    
T  20527935 gacaaacaagatccaactcaaaatcaacattaccaaaattaacaggacacttagcacacataaaagaagtagtcaccga 20528013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 173
Target Start/End: Original strand, 20927839 - 20927978
Alignment:
Q  34 ttagagaatgttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaac 133  Q
    ||||| ||||| | |||||| || ||||| |||||  |||| ||||||| || ||  ||||||||||| ||||||  |   |||||||||||||  | ||    
T  20927839 ttagaaaatgtcacactcttagtcaaacaattaatgctaaccccaaaagctaacaaacaatccataccaaaaatcacatctatatgcttcaacggaagac 20927938  T
Q  134 aaacaaggtacaactcaaaatcaatattaccgaaattaac 173  Q
    ||||||| |  ||||||||||||| |||||| ||||||||    
T  20927939 aaacaagatctaactcaaaatcaacattaccaaaattaac 20927978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 2e-20; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 173
Target Start/End: Complemental strand, 23025411 - 23025269
Alignment:
Q  31 ggcttagagaatgttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgaca 130  Q
    ||||| || ||||||| ||||||||||||||| |||||  |||| ||||||| || ||||||||||||||| ||||||  |  ||||||||||||||  |    
T  23025411 ggcttcgaaaatgttacactcttggttaaacaattaatgctaaccccaaaagataacatccaatccataccaaaaatcacatccatatgcttcaacggaa 23025312  T
Q  131 aacaaacaaggtacaactcaaaatcaatattaccgaaattaac 173  Q
     ||  ||||| | ||||||||||||||| ||||| ||||||||    
T  23025311 gacgcacaagatccaactcaaaatcaatgttaccaaaattaac 23025269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 58 - 208
Target Start/End: Complemental strand, 16379996 - 16379845
Alignment:
Q  58 aaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggtacaactcaaaatcaa 157  Q
    ||||| |||||  |||| ||||||| || || |||||||||||| ||||||  |  ||||||||||||||  | ||||||||| | ||||||||||||||    
T  16379996 aaacaattaatgctaaccccaaaagctaacaaccaatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaa 16379897  T
Q  158 tattaccgaaattaac-gtacacttagcacaaactaaggaaatagtcaccga 208  Q
     || ||| |||||||| | |||||||||||| |  || ||| ||||||||||    
T  16379896 catcaccaaaattaacaggacacttagcacacataaaagaagtagtcaccga 16379845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 58 - 208
Target Start/End: Complemental strand, 16647592 - 16647441
Alignment:
Q  58 aaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggtacaactcaaaatcaa 157  Q
    ||||| |||||  |||| ||||||| || || |||||||||||| ||||||  |  ||||||||||||||  | ||||||||| | ||||||||||||||    
T  16647592 aaacaattaatgctaaccccaaaagctaacaaccaatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaa 16647493  T
Q  158 tattaccgaaattaac-gtacacttagcacaaactaaggaaatagtcaccga 208  Q
     || ||| |||||||| | |||||||||||| |  || ||| ||||||||||    
T  16647492 catcaccaaaattaacaggacacttagcacacataaaagaagtagtcaccga 16647441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 187
Target Start/End: Original strand, 18401288 - 18401433
Alignment:
Q  43 gttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggt 142  Q
    |||| |||||| || ||||| |||||  |||| | ||||| || || |||||||||||| ||||||  |  ||||||||||||||  | | | ||||| |    
T  18401288 gttacactcttagtcaaacaattaatgataacccaaaaagataacaaccaatccataccaaaaatcacatccatatgcttcaacggaagagacacaagat 18401387  T
Q  143 acaactcaaaatcaatattaccgaaattaac-gtacacttagcaca 187  Q
     |||||||||||||| ||||||||||||||| | ||||||||||||    
T  18401388 ccaactcaaaatcaacattaccgaaattaacaggacacttagcaca 18401433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 208
Target Start/End: Complemental strand, 1646437 - 1646286
Alignment:
Q  58 aaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggtacaactcaaaatcaa 157  Q
    ||||| |||||  |||| ||||||| || || |||||||||||| ||||||  |  ||||||||||||||  | | ||||||| | ||||||||||||||    
T  1646437 aaacaattaatgctaaccccaaaagctaacaaccaatccataccaaaaatcacatccatatgcttcaacggaagaaaaacaagatccaactcaaaatcaa 1646338  T
Q  158 tattaccgaaattaac-gtacacttagcacaaactaaggaaatagtcaccga 208  Q
     || ||| |||||||| | |||||||||||| |  || ||| ||||||||||    
T  1646337 catcaccaaaattaacaggacacttagcacacataaaagaagtagtcaccga 1646286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 208
Target Start/End: Original strand, 16100646 - 16100824
Alignment:
Q  31 ggcttagagaatgttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgaca 130  Q
    |||||||| || |||| |||||| || ||||| |||||  |||| | ||||| || || | |||||||||| ||||||  |  ||||||||||||||  |    
T  16100646 ggcttagaaaaagttacactcttagtcaaacaattaatggtaaccctaaaagctaacaactaatccataccaaaaatcacatccatatgcttcaacggaa 16100745  T
Q  131 aacaaacaaggtacaactcaaaatcaatattaccgaaattaac-gtacacttagcacaaactaaggaaatagtcaccga 208  Q
     |||  |||| | |||||||||||||| |||||| |||||||| | |||||||||||| |  || ||| ||||||||||    
T  16100746 gacacgcaagatccaactcaaaatcaacattaccaaaattaacaggacacttagcacacataaaagaagtagtcaccga 16100824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 173
Target Start/End: Original strand, 18578111 - 18578194
Alignment:
Q  90 ccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggtacaactcaaaatcaatattaccgaaattaac 173  Q
    |||||||||||| ||||||  |  ||||||||||||||  | ||| ||||| | |||||||||||||| |||||| ||||||||    
T  18578111 ccaatccataccaaaaatcacatccatatgcttcaacggaagacacacaagatccaactcaaaatcaacattaccaaaattaac 18578194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 187
Target Start/End: Original strand, 16234990 - 16235146
Alignment:
Q  31 ggcttagagaatgttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgaca 130  Q
    |||||||| || || | |||||| || ||||| |||||  |||| ||||||| || || |||||||| | | ||||||  |  |||||||||||| |  |    
T  16234990 ggcttagaaaaagtcacactcttagtcaaacaattaatgctaaccccaaaagctaacaaccaatccaaaacaaaaatcacatccatatgcttcaatggaa 16235089  T
Q  131 aacaaacaaggtacaactcaaaatcaatattaccgaaattaac-gtacacttagcaca 187  Q
     ||||||||| | |||||||||||||| |||||| |||||||| | ||||||||||||    
T  16235090 gacaaacaagatccaactcaaaatcaacattacc-aaattaacaggacacttagcaca 16235146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 157
Target Start/End: Complemental strand, 18836265 - 18836181
Alignment:
Q  73 acaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggtacaactcaaaatcaa 157  Q
    ||||||||||  | ||||||||||||||| ||||||  |  ||||||||||||||  | ||| ||||| | ||||||||||||||    
T  18836265 acaccaaaagacaacatccaatccataccaaaaatcacatccatatgcttcaacggaagacagacaagatccaactcaaaatcaa 18836181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 19985770 - 19985694
Alignment:
Q  115 atatgcttcaacgacaaacaaacaaggtacaactcaaaatcaatattaccgaaattaac-gtacacttagcacaaac 190  Q
    |||||||||||||  | ||||||| | | |||||||||||||| |||||| |||||||| | ||||||| |||||||    
T  19985770 atatgcttcaacggaagacaaacaggatccaactcaaaatcaacattaccaaaattaacaggacacttaacacaaac 19985694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 31 - 223
Target Start/End: Complemental strand, 1129 - 936
Alignment:
Q  31 ggcttagagaatgttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgaca 130  Q
    |||||||| || |||| |||||| || ||||| |||||  |||| ||| ||| || || |||||||||||| ||||||  |  ||||||||||||||  |    
T  1129 ggcttagaaaacgttacactcttagtcaaacaattaatgctaaccccagaagctaacaaccaatccataccaaaaatcacatccatatgcttcaacggaa 1030  T
Q  131 aacaaacaaggtacaactcaaaatcaatattaccgaaattaac-gtacacttagcacaaactaaggaaatagtcaccgagccattggccggggt 223  Q
     ||||||||| | ||||||||||||| ||||||| |||||||| | |||||||||||| |  || ||| |||||||||| ||| | ||||||||    
T  1029 gacaaacaagatccaactcaaaatcagtattaccaaaattaacaggacacttagcacacataaaagaagtagtcaccgaaccactagccggggt 936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 43 - 190
Target Start/End: Original strand, 3291 - 3439
Alignment:
Q  43 gttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggt 142  Q
    |||| ||||||||| ||||| |||||  |||| ||||||| || ||||||||||||||| ||||||  | ||||||||||||| |  | ||| ||||| |    
T  3291 gttaaactcttggtcaaacaattaatgctaaccccaaaagataacatccaatccataccaaaaatcacattcatatgcttcaatggaagacacacaagat 3390  T
Q  143 acaactcaaaatcaatattaccgaaattaac-gtacacttagcacaaac 190  Q
     |||||||||||||| |||||| |||||||| | ||||||| |||||||    
T  3391 ccaactcaaaatcaacattaccaaaattaacaggacacttaccacaaac 3439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 49; Significance: 4e-19; HSPs: 4)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 208
Target Start/End: Original strand, 90292 - 90476
Alignment:
Q  25 tctattggcttagagaatgttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttca 124  Q
    ||||| |||||||| || |||| |||||| || ||||| |||||  |||| ||||||| || || |||||||||||| ||||||  |  |||| ||||||    
T  90292 tctatcggcttagaaaaagttacactcttagtcaaacaattaatgctaaccccaaaagctaacaaccaatccataccaaaaatcacatccatacgcttca 90391  T
Q  125 acgacaaacaaacaaggtacaactcaaaatcaatattaccgaaattaac-gtacacttagcacaaactaaggaaatagtcaccga 208  Q
    |||  | ||||||||| | |||||||||||||| |||||| |||||||| | |||||||||||| |  || ||| ||||||||||    
T  90392 acggaagacaaacaagatccaactcaaaatcaacattaccaaaattaacaggacacttagcacacataaaagaagtagtcaccga 90476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 108
Target Start/End: Complemental strand, 21362 - 21285
Alignment:
Q  31 ggcttagagaatgttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatc 108  Q
    ||||| || ||||||||||||||||| ||||| |||||  |||| ||||||| || ||||||||| ||||| ||||||    
T  21362 ggcttcgaaaatgttatactcttggtcaaacaattaatgctaaccccaaaagataacatccaatcgataccaaaaatc 21285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 108
Target Start/End: Complemental strand, 30938 - 30861
Alignment:
Q  31 ggcttagagaatgttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatc 108  Q
    ||||| || ||||||||||||||||| ||||| |||||  |||| ||||||| || ||||||||| ||||| ||||||    
T  30938 ggcttcgaaaatgttatactcttggtcaaacaattaatgctaaccccaaaagataacatccaatcgataccaaaaatc 30861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 208
Target Start/End: Original strand, 7953 - 8131
Alignment:
Q  31 ggcttagagaatgttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgaca 130  Q
    ||||| || ||||||| |||  |||| ||||| |||||  |||| |||||||  | || |||||||||||| ||||||  |  ||||||||||||||  |    
T  7953 ggcttcgaaaatgttacacttctggtcaaacaattaatgctaaccccaaaagagaacaaccaatccataccaaaaatcacatccatatgcttcaacggaa 8052  T
Q  131 aacaaacaaggtacaactcaaaatcaatattaccgaaattaac-gtacacttagcacaaactaaggaaatagtcaccga 208  Q
     ||| ||||| ||||||| |||||||| || ||| ||||| || | |||||||||||| |  || ||| ||||||||||    
T  8053 gacacacaagatacaacttaaaatcaacatcaccaaaattgacaggacacttagcacacataaaagaagtagtcaccga 8131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 37 - 107
Target Start/End: Original strand, 77226 - 77296
Alignment:
Q  37 gagaatgttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaat 107  Q
    |||||||||||||||||||||||| ||||||| ||||| ||||| | || |||||||||||||||||||||    
T  77226 gagaatgttatactcttggttaaatagttaatgttaactccaaaggataacatccaatccataccgaaaat 77296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 77339 - 77413
Alignment:
Q  144 caactcaaaatcaatattaccgaaattaac-gtacacttagcacaaactaaggaaatagtcaccgagccattggc 217  Q
    ||||||||||||||  ||||| |||||||| | | |||||||||||||||||||| |||||| | ||||||||||    
T  77339 caactcaaaatcaacgttaccaaaattaacaggaaacttagcacaaactaaggaagtagtcatcaagccattggc 77413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 223
Target Start/End: Original strand, 3296 - 3488
Alignment:
Q  31 ggcttagagaatgttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgaca 130  Q
    |||||||| ||| |||||||||||||||| ||||||||  ||||||||||||  | ||||||||||||||| ||||||  |  ||| ||||||||||| |    
T  3296 ggcttaga-aatattatactcttggttaagcagttaatgctaacaccaaaagacaacatccaatccataccaaaaatcacatccatgtgcttcaacgaaa 3394  T
Q  131 aacaaacaaggtacaactcaaaatcaatattaccgaaattaac-gtacacttagcacaaactaaggaaatagtcaccgagccattggccggggt 223  Q
     ||| ||||| | |||||| ||||||| | |||| |||  |||   ||||||||||||  |||| ||| ||||||| |||||| ||| ||||||    
T  3395 gacacacaagatccaactctaaatcaacactaccaaaacgaacaagacacttagcacaccctaacgaagtagtcactgagccactggtcggggt 3488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 9e-17; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 6150580 - 6150440
Alignment:
Q  48 actcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggtacaac 147  Q
    |||||| || ||||| |||||  |||| ||||||| || || |||||||||||| ||||||  |  ||||||||||||||  | ||||||||| | ||||    
T  6150580 actcttagtcaaacaattaatgctaaccccaaaagctaacaaccaatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaac 6150481  T
Q  148 tcaaaatcaatattaccgaaattaac-gtacacttagcaca 187  Q
    |||||||||| |||||| |||||||| | ||||||||||||    
T  6150480 tcaaaatcaacattaccaaaattaacaggacacttagcaca 6150440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 137
Target Start/End: Complemental strand, 3296114 - 3296012
Alignment:
Q  35 tagagaatgttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaaca 134  Q
    |||||||||||||||| ||||||||||||||||| ||||| | ||||| ||||||||| ||||| ||||| |||  | ||||||||  ||||| ||| ||    
T  3296114 tagagaatgttatacttttggttaaacagttaatgttaacccaaaaagatagcatccagtccattccgaatatcacattcatatgcaccaacggcaagca 3296015  T
Q  135 aac 137  Q
    |||    
T  3296014 aac 3296012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 187
Target Start/End: Original strand, 15612525 - 15612655
Alignment:
Q  58 aaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggtacaactcaaaatcaa 157  Q
    ||||| |||||  |||| ||||||| || || |||||||||||| ||||||  |  ||||||||||||||  | ||||||||| | ||||||||||||||    
T  15612525 aaacaattaatgctaaccccaaaagctaacaaccaatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaa 15612624  T
Q  158 tattaccgaaattaac-gtacacttagcaca 187  Q
     |||||| |||||||| | ||||||||||||    
T  15612625 cattaccaaaattaacaggacacttagcaca 15612655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 17201048 - 17201209
Alignment:
Q  48 actcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggtacaac 147  Q
    |||||| ||||| || |||||  |||| ||||||| || || |||||||||||| ||||||  |  ||||||||||||||  | ||| ||||| | ||||    
T  17201048 actcttagttaaccaattaatgctaaccccaaaagatatcaaccaatccataccaaaaatcacatccatatgcttcaacggaagacacacaagatccaac 17201147  T
Q  148 tcaaaatcaatattaccgaaattaac-gtacacttagcacaaactaaggaaatagtcaccga 208  Q
    |||||||||| |||||| |||||||| | ||| |||||||| || || ||| ||||||||||    
T  17201148 tcaaaatcaacattacctaaattaacaggacaattagcacacacaaaagaagtagtcaccga 17201209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 58 - 208
Target Start/End: Original strand, 30149780 - 30149931
Alignment:
Q  58 aaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggtacaactcaaaatcaa 157  Q
    ||||| |||||  |||| ||||||| || || |||||||||||| ||||||  |  ||||||||||||||  | ||||||||| | ||||||||||||||    
T  30149780 aaacaattaatgctaaccccaaaagctaacaaccaatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaa 30149879  T
Q  158 tattaccgaaattaac-gtacacttagcacaaactaaggaaatagtcaccga 208  Q
     || ||| |||||||| | |||||||||||| |  || ||| ||||||||||    
T  30149880 catcaccaaaattaacaggacacttagcacacataaaagaagtagtcaccga 30149931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 157
Target Start/End: Original strand, 12795963 - 12796089
Alignment:
Q  31 ggcttagagaatgttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgaca 130  Q
    |||||||| || |||| |||||| || ||||| |||||  |||| ||||||| || || |||||||||||| ||||||  |  ||||||||||||||  |    
T  12795963 ggcttagaaaaagttacactcttagtcaaacaattaatgctaaccccaaaagctaacaaccaatccataccaaaaatcacatccatatgcttcaacggaa 12796062  T
Q  131 aacaaacaaggtacaactcaaaatcaa 157  Q
     ||||||||| | ||||||||||||||    
T  12796063 gacaaacaagatccaactcaaaatcaa 12796089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 187
Target Start/End: Complemental strand, 13965069 - 13964939
Alignment:
Q  58 aaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggtacaactcaaaatcaa 157  Q
    ||||| |||||  |||| ||||||| || || |||||||||||| ||||||  |  ||||||||||||||  | ||||||||| | ||||||||||||||    
T  13965069 aaacaattaatgctaaccccaaaagctaacaaccaatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaa 13964970  T
Q  158 tattaccgaaattaac-gtacacttagcaca 187  Q
     || ||| |||||||| | ||||||||||||    
T  13964969 catcaccaaaattaacaggacacttagcaca 13964939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 208
Target Start/End: Complemental strand, 15948175 - 15948037
Alignment:
Q  71 taacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggtacaactcaaaatcaatattaccgaaatt 170  Q
    |||| ||||||| || || |||||||||||| ||||||  |  ||||||||| ||||  | ||||||||| | |||||||||||||| |||||| |||||    
T  15948175 taactccaaaagctaacaaccaatccataccaaaaatcacatccatatgcttaaacggaagacaaacaagatccaactcaaaatcaacattaccaaaatt 15948076  T
Q  171 aac-gtacacttagcacaaactaaggaaatagtcaccga 208  Q
    ||| | |||||||||||| |  || ||| ||||||||||    
T  15948075 aacaggacacttagcacacataaaagaagtagtcaccga 15948037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 173
Target Start/End: Complemental strand, 8272098 - 8272001
Alignment:
Q  76 ccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggtacaactcaaaatcaatattaccgaaattaac 173  Q
    ||||||| || || |||||||||||| ||||||  |  ||||||||||||||  | ||||||||| | |||||||||||||| || ||| ||||||||    
T  8272098 ccaaaagctaacaaccaatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacatcaccaaaattaac 8272001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 190
Target Start/End: Original strand, 30140229 - 30140362
Alignment:
Q  58 aaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggtacaactcaaaatcaa 157  Q
    ||||| |||||  |||| ||||||| || || |||||||||||| |||||   |  ||||||||||||||  | ||||||||| | ||||||||||||||    
T  30140229 aaacaattaatgctaaccccaaaagctaacaaccaatccataccaaaaataacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaa 30140328  T
Q  158 tattaccgaaattaac-gtacacttagcacaaac 190  Q
     || ||| |||||||| | ||||||| |||||||    
T  30140329 catcaccaaaattaacagaacacttaacacaaac 30140362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 157
Target Start/End: Original strand, 18915455 - 18915579
Alignment:
Q  33 cttagagaatgttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaa 132  Q
    |||||| || |||| |||||| || ||||| |||||  |||||||||||| || || |||||||||||| ||||||  |  ||||||||||||||  |      
T  18915455 cttagaaaacgttacactcttagtaaaacaattaatgataacaccaaaagctaacaaccaatccataccaaaaatcacatccatatgcttcaacggaagc 18915554  T
Q  133 caaacaaggtacaactcaaaatcaa 157  Q
    |||||||| | ||||||||| ||||    
T  18915555 caaacaagatccaactcaaagtcaa 18915579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 48 - 190
Target Start/End: Complemental strand, 93931 - 93788
Alignment:
Q  48 actcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggtacaac 147  Q
    |||||| || ||||| |||||  |||| |||||||||| ||  ||||||||||| ||||||  |  ||||||||||||||  | ||||||||| | ||||    
T  93931 actcttagtcaaacaattaatgctaaccccaaaagttaacaatcaatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaac 93832  T
Q  148 tcaaaatcaatattaccgaaattaac-gtacacttagcacaaac 190  Q
    || ||||||| ||||||||||||||| | ||||||| |||||||    
T  93831 tccaaatcaacattaccgaaattaacaggacacttaacacaaac 93788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 3e-16; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 58 - 208
Target Start/End: Original strand, 24583918 - 24584069
Alignment:
Q  58 aaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggtacaactcaaaatcaa 157  Q
    ||||| |||||  |||| ||||||| || || |||||||||||| ||||||  |  ||||||||||||||  | ||||||||| | ||||||||||||||    
T  24583918 aaacaattaatgctaaccccaaaagctaacaaccaatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaa 24584017  T
Q  158 tattaccgaaattaac-gtacacttagcacaaactaaggaaatagtcaccga 208  Q
    ||| ||| |||||||| | |||||||||||| |  || ||| ||||||||||    
T  24584018 tatcaccaaaattaacaggacacttagcacacataaaagaagtagtcaccga 24584069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 58 - 208
Target Start/End: Complemental strand, 21934848 - 21934697
Alignment:
Q  58 aaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggtacaactcaaaatcaa 157  Q
    ||||| |||||  |||| ||||||| || || |||||||||||| ||||||  |  ||||||||||||||  | ||||||||| | ||||||||||||||    
T  21934848 aaacaattaatgctaaccccaaaagctaacaaccaatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaa 21934749  T
Q  158 tattaccgaaattaac-gtacacttagcacaaactaaggaaatagtcaccga 208  Q
     || ||| |||||||| | |||||||||||| |  || ||| ||||||||||    
T  21934748 catcaccaaaattaacaggacacttagcacacataaaagaagtagtcaccga 21934697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 173
Target Start/End: Original strand, 23508392 - 23508507
Alignment:
Q  58 aaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggtacaactcaaaatcaa 157  Q
    ||||| |||||  |||| ||||||| || || |||||||||||| ||||||  |  ||||||||||||||  | ||||||||| |  |||||||||||||    
T  23508392 aaacaattaatgctaaccccaaaagctaacaaccaatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatctaactcaaaatcaa 23508491  T
Q  158 tattaccgaaattaac 173  Q
     |||||| ||||||||    
T  23508492 cattaccaaaattaac 23508507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 223
Target Start/End: Complemental strand, 12340373 - 12340179
Alignment:
Q  30 tggcttagagaatgttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgac 129  Q
    ||||||||| |||||||||||||||||||| || || || |||||||||||||  | |||| | |||||||| ||||||     ||| ||||||||||      
T  12340373 tggcttagataatgttatactcttggttaagcaattgatgttaacaccaaaagacaacatctagtccataccaaaaatcacgtccatgtgcttcaacgga 12340274  T
Q  130 aaacaaacaaggtacaactcaaaatcaatattaccgaaattaacgt-acacttagcacaaactaaggaaatagtcaccgagccattggccggggt 223  Q
    | ||| ||||| | ||||||||| |||| ||||||  | ||||| | ||||||||| || || |||||| |||||||||| ||| ||| ||||||    
T  12340273 agacacacaagatccaactcaaagtcaacattaccagagttaacatgacacttagcgcacaccaaggaagtagtcaccgaaccactggtcggggt 12340179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 208
Target Start/End: Complemental strand, 15290604 - 15290485
Alignment:
Q  90 ccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggtacaactcaaaatcaatattaccgaaattaac-gtacacttagcacaa 188  Q
    |||||||||||| ||||||  |  ||||||||||||||  | ||||||||| | |||||||||||||| || ||| |||||||| | ||||||||||||     
T  15290604 ccaatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacatcaccaaaattaacaggacacttagcacac 15290505  T
Q  189 actaaggaaatagtcaccga 208  Q
    |  || ||| ||||||||||    
T  15290504 ataaaagaagtagtcaccga 15290485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 208
Target Start/End: Original strand, 14999425 - 14999591
Alignment:
Q  43 gttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggt 142  Q
    |||| |||||| || ||||| |||||  |||| ||||||| ||  | | |||||||||| ||||||  |  ||||||||||||||  | ||||||||| |    
T  14999425 gttacactcttagtcaaacaattaatgctaaccccaaaagctaataacaaatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagat 14999524  T
Q  143 acaactcaaaatcaatattaccgaaattaac-gtacacttagcacaaactaaggaaatagtcaccga 208  Q
     |||||||||||||| || ||| |||||||| | |||||||||||| |  || ||| ||||||||||    
T  14999525 ccaactcaaaatcaacatcaccaaaattaacaggacacttagcacacataaaagaagtagtcaccga 14999591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 187
Target Start/End: Original strand, 9292993 - 9293090
Alignment:
Q  91 caatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggtacaactcaaaatcaatattaccgaaattaac-gtacacttagcaca 187  Q
    ||||||||||| ||||||  |  ||||||||||||||  | ||| ||||  | |||||||||||||| |||||| |||||||| | ||||||||||||    
T  9292993 caatccataccaaaaatcacatccatatgcttcaacggaagacacacaaaatccaactcaaaatcaacattaccaaaattaacaggacacttagcaca 9293090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 31 - 187
Target Start/End: Complemental strand, 13133 - 12976
Alignment:
Q  31 ggcttagagaatgttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgaca 130  Q
    |||||||| || || | |||||| || ||||| |||||  |||| ||||||| || || |||||||||||| ||| ||  |  ||||||||||||||  |    
T  13133 ggcttagaaaaagtcacactcttagtcaaacaattaatgctaaccccaaaagctaacaaccaatccataccaaaattcacatccatatgcttcaacggaa 13034  T
Q  131 aacaaacaaggtacaactcaaaatcaatattaccgaaattaac-gtacacttagcaca 187  Q
     ||||||||| | |||||||||||||| |||||| |||||||| | ||||||||||||    
T  13033 gacaaacaagatccaactcaaaatcaacattaccaaaattaacaggacacttagcaca 12976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 58 - 208
Target Start/End: Original strand, 26219 - 26370
Alignment:
Q  58 aaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggtacaactcaaaatcaa 157  Q
    ||||| |||||  |||| ||||||| || || |||||||||||| ||||||  |  ||||||||||||||  | ||||||||| | ||||||||||||||    
T  26219 aaacaattaatgctaaccccaaaagctaacaaccaatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaa 26318  T
Q  158 tattaccgaaattaac-gtacacttagcacaaactaaggaaatagtcaccga 208  Q
     || ||| |||||||| | |||||||||||| |  || ||| ||||||||||    
T  26319 catcaccaaaattaacaggacacttagcacacataaaagaagtagtcaccga 26370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 58 - 173
Target Start/End: Original strand, 34908 - 35023
Alignment:
Q  58 aaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggtacaactcaaaatcaa 157  Q
    ||||| |||||  |||| ||||||| || || |||||||||||| ||||||  |  ||||||||||||||  | ||||||||| | ||||||||||||||    
T  34908 aaacaattaatgctaaccccaaaagctaacaaccaatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaa 35007  T
Q  158 tattaccgaaattaac 173  Q
     |||||| ||||||||    
T  35008 cattaccaaaattaac 35023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 58 - 208
Target Start/End: Original strand, 23786 - 23937
Alignment:
Q  58 aaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggtacaactcaaaatcaa 157  Q
    ||||| |||||  |||| ||||||| || || |||||||||||| ||||||  |  ||||||||||||||  | ||||||||| | ||||||||||||||    
T  23786 aaacaattaatgctaaccccaaaagctaacaaccaatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaa 23885  T
Q  158 tattaccgaaattaac-gtacacttagcacaaactaaggaaatagtcaccga 208  Q
     || ||| |||||||| | |||||||||||| |  || ||| ||||||||||    
T  23886 catcaccaaaattaacaggacacttagcacacataaaagaagtagtcaccga 23937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 225
Target Start/End: Complemental strand, 176029 - 175826
Alignment:
Q  23 catctattggcttagagaatgttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgctt 122  Q
    |||||| | |||||||||| |||||||||||||||||||| |||||  |||||| |||||  | |||||| |||||||| ||||||  |  ||| |||||    
T  176029 catctactagcttagagaaagttatactcttggttaaacaattaatgctaacactaaaagacaacatccagtccataccaaaaatcacatccatgtgctt 175930  T
Q  123 caacgacaaacaaacaaggtacaactcaaaatcaatattaccgaaattaac-gtacacttagcacaaactaaggaaatagtcaccgagccattggccggg 221  Q
     ||||  | | | |||||   |||||||||||||| |||||| || ||||| | |||||||| |||    |||||| |||||||||| ||| ||| ||||    
T  175929 taacggaagaaacacaagaaccaactcaaaatcaacattaccaaagttaacgggacacttagaacacctcaaggaagtagtcaccgaaccactggtcggg 175830  T
Q  222 gtat 225  Q
    ||||    
T  175829 gtat 175826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 208
Target Start/End: Complemental strand, 74093 - 73927
Alignment:
Q  43 gttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggt 142  Q
    |||| |||||| || ||||| |||||  |||| ||||||| || || |||||||||||| ||||||  |  ||||||||||||||  | ||||||||| |    
T  74093 gttacactcttagtcaaacaattaatgctaaccccaaaagctaacagccaatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagat 73994  T
Q  143 acaactcaaaatcaatattaccgaaattaac-gtacacttagcacaaactaaggaaatagtcaccga 208  Q
      ||||||||||||| |||| | |||||||| | |||||||||||| |  || ||| ||||||||||    
T  73993 cgaactcaaaatcaacattaacaaaattaacaggacacttagcacacataaaagaagtagtcaccga 73927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 208
Target Start/End: Complemental strand, 78474 - 78308
Alignment:
Q  43 gttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggt 142  Q
    |||| |||||| || ||||| |||||  |||| ||||||| || || |||||||||||| ||||||  |  ||||||||||||||  | ||||||||| |    
T  78474 gttacactcttagtcaaacaattaatgctaaccccaaaagctaacagccaatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagat 78375  T
Q  143 acaactcaaaatcaatattaccgaaattaac-gtacacttagcacaaactaaggaaatagtcaccga 208  Q
      ||||||||||||| |||| | |||||||| | |||||||||||| |  || ||| ||||||||||    
T  78374 cgaactcaaaatcaacattaacaaaattaacaggacacttagcacacataaaagaagtagtcaccga 78308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 208
Target Start/End: Complemental strand, 5812 - 5634
Alignment:
Q  31 ggcttagagaatgttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgaca 130  Q
    |||||||| || |||| |||||| || ||||| |||||  |||| ||||||| || || |||||||||||| ||||||  |  |||||||||||||   |    
T  5812 ggcttagaaaaagttacactcttagtcaaacaattaatgctaaccccaaaagataacaaccaatccataccaaaaatcacatccatatgcttcaacagaa 5713  T
Q  131 aacaaacaaggtacaactcaaaatcaatattaccgaaattaac-gtacacttagcacaaactaaggaaatagtcaccga 208  Q
     ||||||||| |  || |||||||||| |||||| |||||||| | |||||||||||| |  || ||| ||||||||||    
T  5712 gacaaacaagatcaaattcaaaatcaacattaccaaaattaacaggacacttagcacacataaaagaagtagtcaccga 5634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 173
Target Start/End: Complemental strand, 4410 - 4268
Alignment:
Q  31 ggcttagagaatgttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgaca 130  Q
    |||||||| || |||| |||||| || ||||| |||||  |||| ||||||| || || |||||||||||| ||||||  |  ||||||||||||||  |    
T  4410 ggcttagaaaaagttacactcttagtcaaacaattaatgctaaccccaaaagataacaaccaatccataccaaaaatcacatccatatgcttcaacggaa 4311  T
Q  131 aacaaacaaggtacaactcaaaatcaatattaccgaaattaac 173  Q
     ||| ||||| | ||||||||| |||| |||||| ||||||||    
T  4310 gacacacaagatccaactcaaagtcaacattaccaaaattaac 4268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 1443 - 1282
Alignment:
Q  48 actcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggtacaac 147  Q
    |||||| || ||||| |||||  |||| ||||||| || || |||||||||||| ||||||  |  |||||||||||||   | ||||||||| | ||||    
T  1443 actcttagtcaaacaattaatgctaaccccaaaagctaacaaccaatccataccaaaaatcacatccatatgcttcaacagaagacaaacaagatccaac 1344  T
Q  148 tcaaaatcaatattaccgaaattaa-cgtacacttagcacaaactaaggaaatagtcaccga 208  Q
    |||||||||| |||||| |||||||  | |||||||||||| |  || ||| ||||||||||    
T  1343 tcaaaatcaacattaccaaaattaataggacacttagcacacataaaagaagtagtcaccga 1282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 208
Target Start/End: Complemental strand, 5287 - 5136
Alignment:
Q  58 aaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggtacaactcaaaatcaa 157  Q
    ||||| |||||  |||| ||||||| || || |||||||||||| ||||||  |  ||||||||||||||  | ||||||||| | |||| |||||||||    
T  5287 aaacaattaatgctaaccccaaaagctaacaaccaatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaacacaaaatcaa 5188  T
Q  158 tattaccgaaattaac-gtacacttagcacaaactaaggaaatagtcaccga 208  Q
     || ||| |||||||| | |||||||||||| |  || ||| ||||||||||    
T  5187 catcaccaaaattaacagaacacttagcacacataaaagaagtagtcaccga 5136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 2530 - 2660
Alignment:
Q  43 gttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggt 142  Q
    |||| |||||| || ||||| |||||  |||| ||||||| || || |||||||||||| ||||||  |  ||||||||| ||||  ||||| ||||| |    
T  2530 gttacactcttagtgaaacaattaatgctaaccccaaaagctaacaaccaatccataccaaaaatcacatccatatgctttaacggaaaacacacaagat 2629  T
Q  143 acaactcaaaatcaatattaccgaaattaac 173  Q
      ||||||||||||| |||||| ||||||||    
T  2630 ctaactcaaaatcaacattaccaaaattaac 2660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 187
Target Start/End: Complemental strand, 25014 - 24916
Alignment:
Q  90 ccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggtacaactcaaaatcaatattaccgaaattaac-gtacacttagcaca 187  Q
    |||||||||||| ||||||  |  ||||||||||||||  | ||| ||||| | |||||||||||||| |||||| |||||||| | ||||||||||||    
T  25014 ccaatccataccaaaaatcacatccatatgcttcaacgggagacacacaagatccaactcaaaatcaacattaccaaaattaacaggacacttagcaca 24916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 225
Target Start/End: Complemental strand, 21168 - 21039
Alignment:
Q  97 ataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggtacaactcaaaatcaatattaccgaaattaacgt-acacttagcacaaactaagg 195  Q
    ||||||||||||  |  |||||||||||||   | ||||||||| |||||||||||||| |   |||| ||| |||||  |||||||||||||   ||||    
T  21168 ataccgaaaatcacatccatatgcttcaacagaagacaaacaagatacaactcaaaatcgacgctaccaaaactaacgggacacttagcacaactaaagg 21069  T
Q  196 aaatagtcaccgagccattggccggggtat 225  Q
    || |||||||||| ||||||| ||||||||    
T  21068 aagtagtcaccgacccattggtcggggtat 21039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 187
Target Start/End: Complemental strand, 17855 - 17699
Alignment:
Q  31 ggcttagagaatgttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgaca 130  Q
    |||||||| || || | |||||| || ||||| |||||  |||| ||||||| || || |||||||||||| ||||||  |  |||||||||||| |  |    
T  17855 ggcttagaaaaagtcacactcttagtcaaacaattaatgctaaccccaaaagctaacaaccaatccataccaaaaatcacatccatatgcttcaatggaa 17756  T
Q  131 aacaaacaaggtacaactcaaaatcaatattaccgaaattaac-gtacacttagcaca 187  Q
     ||| ||||| | ||||| |||||||| ||||||||||||||| | ||||||||||||    
T  17755 gacacacaagattcaact-aaaatcaacattaccgaaattaacaggacacttagcaca 17699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 172
Target Start/End: Original strand, 24986 - 25115
Alignment:
Q  43 gttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggt 142  Q
    |||| |||||| || ||||| |||||  |||| ||||||| || || |||||||||||| ||||||  |  ||||||||| ||||  | ||| ||||| |    
T  24986 gttacactcttcgtcaaacaattaatgctaaccccaaaagataacaaccaatccataccaaaaatcacatccatatgctttaacggaagacacacaagat 25085  T
Q  143 acaactcaaaatcaatattaccgaaattaa 172  Q
     |||||||||||||| |||||| |||||||    
T  25086 ccaactcaaaatcaacattaccaaaattaa 25115  T

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Target: scaffold0102 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 170
Target Start/End: Complemental strand, 46508 - 46452
Alignment:
Q  114 catatgcttcaacgacaaacaaacaaggtacaactcaaaatcaatattaccgaaatt 170  Q
    ||||||||||||||  | ||||||||| | |||||||||||||| ||||||||||||    
T  46508 catatgcttcaacggaagacaaacaagatccaactcaaaatcaacattaccgaaatt 46452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 10887 - 10760
Alignment:
Q  31 ggcttagagaatgttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgaca 130  Q
    |||||||| || |||| |||||| || ||||| |||||  |||| |||||||||| || |||||||||||| ||||||  |  ||||||||| ||||  |    
T  10887 ggcttagaaaacgttacactcttagtcaaacaattaatgctaaccccaaaagttaacaaccaatccataccaaaaatcacatccatatgctttaacggaa 10788  T
Q  131 aacaaacaaggtacaact-caaaatcaa 157  Q
     ||||||||| | ||||| |||||||||    
T  10787 gacaaacaagatccaactccaaaatcaa 10760  T

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Target: scaffold0302 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 173
Target Start/End: Original strand, 1034 - 1149
Alignment:
Q  58 aaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggtacaactcaaaatcaa 157  Q
    ||||| |||||  |||| ||||||| || || |||||||||||| ||||||  |  ||||||||||||||  | | ||||||| | ||||||||||||||    
T  1034 aaacaattaatgctaaccccaaaagctaacaaccaatccataccaaaaatcacatccatatgcttcaacggaagagaaacaagatccaactcaaaatcaa 1133  T
Q  158 tattaccgaaattaac 173  Q
     || ||| ||||||||    
T  1134 catcaccaaaattaac 1149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 173
Target Start/End: Original strand, 2333 - 2416
Alignment:
Q  90 ccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggtacaactcaaaatcaatattaccgaaattaac 173  Q
    |||||||||||| ||||||  |  ||||||||||||||  | ||| ||||| | |||||||||||||| |||||| ||||||||    
T  2333 ccaatccataccaaaaatcacatccatatgcttcaacggaagacacacaagatccaactcaaaatcaacattaccaaaattaac 2416  T

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Target: scaffold0266 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 173
Target Start/End: Complemental strand, 7310 - 7227
Alignment:
Q  90 ccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggtacaactcaaaatcaatattaccgaaattaac 173  Q
    |||||||||||| ||||||  |  ||||||||||||||  | ||||||||| | |||||||||||||| || ||| ||||||||    
T  7310 ccaatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacatcaccaaaattaac 7227  T

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Target: scaffold0162 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 173
Target Start/End: Original strand, 15706 - 15848
Alignment:
Q  31 ggcttagagaatgttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgaca 130  Q
    |||||||| || |||| |||||| || ||||| |||||  || | ||||||| || || |||||||||||| ||| ||  |  ||||||||||||||  |    
T  15706 ggcttagaaaaagttacactcttagtcaaacaattaatgctagccccaaaagctaacaaccaatccataccaaaactcacatccatatgcttcaacggaa 15805  T
Q  131 aacaaacaaggtacaactcaaaatcaatattaccgaaattaac 173  Q
      |||||||| | |||||||||||||  |||||| ||||||||    
T  15806 ggcaaacaagatccaactcaaaatcagcattaccaaaattaac 15848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 172
Target Start/End: Complemental strand, 131957 - 131856
Alignment:
Q  71 taacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttcaacgacaaacaaacaaggtacaactcaaaatcaatattaccgaaatt 170  Q
    |||| ||||||| || || |||||||||||| ||||||  |  ||||||||||||||  | ||||||||| | ||||| ||||| || |||||| |||||    
T  131957 taaccccaaaagctaacaaccaatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaacttaaaattaacattaccaaaatt 131858  T
Q  171 aa 172  Q
    ||    
T  131857 aa 131856  T

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Target: scaffold1486 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1486
Description:

Target: scaffold1486; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 173
Target Start/End: Original strand, 297 - 445
Alignment:
Q  25 tctattggcttagagaatgttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttca 124  Q
    ||||| |||||||| || || | |||||| || ||||| |||||  |||| ||||||  || |  |||||||||||| ||||||  |  |||||||||||    
T  297 tctatcggcttagaaaaagtcacactcttagtcaaacaattaatgctaaccccaaaacctaacgaccaatccataccaaaaatcacatccatatgcttca 396  T
Q  125 acgacaaacaaacaaggtacaactcaaaatcaatattaccgaaattaac 173  Q
    |||  | ||||||||| | ||||| |||||||| |||| | ||||||||    
T  397 acggaagacaaacaagatccaacttaaaatcaacattatcaaaattaac 445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 223
Target Start/End: Complemental strand, 2374 - 2294
Alignment:
Q  144 caactcaaaatcaatattaccgaaattaac-gtacacttagcacaaactaaggaaatagtcaccgagccattggccggggt 223  Q
    |||||||||||||| |||||| ||||||||   |||||||||||| || || ||| |||||||||| ||| | ||||||||    
T  2374 caactcaaaatcaacattaccaaaattaacaagacacttagcacacacaaaagaagtagtcaccgaaccactagccggggt 2294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 173
Target Start/End: Complemental strand, 54125 - 53977
Alignment:
Q  25 tctattggcttagagaatgttatactcttggttaaacagttaatcttaacaccaaaagttagcatccaatccataccgaaaatcttactcatatgcttca 124  Q
    ||||| |||||||| || || | |||||| || ||||| |||||  |||| ||||||  || |  |||||||||||| ||||||  |  |||||||||||    
T  54125 tctatcggcttagaaaaagtcacactcttagtcaaacaattaatgctaaccccaaaaactaacgaccaatccataccaaaaatcacatccatatgcttca 54026  T
Q  125 acgacaaacaaacaaggtacaactcaaaatcaatattaccgaaattaac 173  Q
    |||  | ||||||||| | ||||| |||||||| |||| | ||||||||    
T  54025 acggaagacaaacaagatccaacttaaaatcaacattatcaaaattaac 53977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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