View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10233A_low_328 (Length: 227)
Name: NF10233A_low_328
Description: NF10233A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10233A_low_328 |
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Alignment Details
Target: chr2 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 17 - 211
Target Start/End: Original strand, 25755487 - 25755681
Alignment:
| Q |
17 |
catcacagaatggaatcggaaaaaaggctctggatgatatacaaatacttcacacagacacactagttaaagaggtaactgaaaacggttcaatcagaat |
116 |
Q |
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| T |
25755487 |
catcacagaatggaatcggaaaaaaggctctggatgatatacaaatacttcacacagacacactagttaaagaggtaactgaaaacggttcaatcagaat |
25755586 |
T |
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| Q |
117 |
tcaattgagattgtttaatcttttcatggaaaatatttaaatttatgggtaacttgtcaggtggaaagggtgttcagtgcaaatcatcctgatgt |
211 |
Q |
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| T |
25755587 |
tcaattgagattgtttaatcttttcatggaaaatatttaaatttttgggtaacttgtcaggtggaaagggtgttcagtgcaaatcatcctgatgt |
25755681 |
T |
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