View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10233A_low_368 (Length: 211)
Name: NF10233A_low_368
Description: NF10233A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10233A_low_368 |
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Alignment Details
Target: chr5 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 22 - 171
Target Start/End: Complemental strand, 929895 - 929746
Alignment:
| Q |
22 |
gtatcaaagatgggaagaaaggtaggaaattctcacatttatcgtgtatggatggatacaatctaatgcattttgctaggtagaaatcaaattatctttg |
121 |
Q |
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| T |
929895 |
gtatcaaaggtggtaagaaaggtaggaaattctcacatttatcgtgtatggatggatacaatctaatgcatttttctaggtagaaatcaaattatctttg |
929796 |
T |
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| Q |
122 |
aaggaaactcaatgaatgtaagcggcatagtgtcgcatattaaaatggtt |
171 |
Q |
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| T |
929795 |
aaggaaactcaatgaatgtaagcggcatagtgtcgcatattaaaatggtt |
929746 |
T |
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