View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10233A_low_373 (Length: 207)
Name: NF10233A_low_373
Description: NF10233A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10233A_low_373 |
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Alignment Details
Target: chr6 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 14 - 196
Target Start/End: Original strand, 18256433 - 18256615
Alignment:
| Q |
14 |
gtttggtgttcgcatctgtgtttgtctttcttatcattatagacaccttataaaaataattagcaattcgattttcacatgttaatacagtttattctat |
113 |
Q |
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| T |
18256433 |
gtttagtgttcgcatctgtgtttatctttcttatcattatagacaccttataaaaataattagcaattcgattttcccatgttaatacaatttatactat |
18256532 |
T |
|
| Q |
114 |
aaataagattgctaatacatagttgttttcattattcaaggaagatatattggatgaaactgatcaatacattgatgtccatc |
196 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
18256533 |
aaataagattgctaatacatagttgttttcattattcaaggaagatatattggatgaaactgatcaatacattgatgtccatc |
18256615 |
T |
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