View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10233A_low_375 (Length: 207)
Name: NF10233A_low_375
Description: NF10233A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10233A_low_375 |
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Alignment Details
Target: chr5 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 16 - 151
Target Start/End: Original strand, 10790409 - 10790544
Alignment:
| Q |
16 |
tgagatgaatattgaaagggaaacagtagagttacataagcagtctataagttctagtattcttgttaatacttttctttacactaaagacctgtttaaa |
115 |
Q |
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| T |
10790409 |
tgagatgaatattgaaagggaaacagtagagttacataagcagtctataagttctagtatccttgttaatacttttctttacactaaagacatgtttaaa |
10790508 |
T |
|
| Q |
116 |
attaaaacaaaggaagaaagacttcaaaaagctcga |
151 |
Q |
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|||| ||||||||||||||||||||||||||||||| |
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| T |
10790509 |
attacaacaaaggaagaaagacttcaaaaagctcga |
10790544 |
T |
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