View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10233A_low_383 (Length: 203)
Name: NF10233A_low_383
Description: NF10233A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10233A_low_383 |
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Alignment Details
Target: chr1 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 19 - 183
Target Start/End: Complemental strand, 28416352 - 28416188
Alignment:
| Q |
19 |
gatgaagagcaggagcagacaaattcgttctttcgaaatcttgtgagtgatccacctgaaccagtgatttgggcacttgtctaacccaaattttatgtta |
118 |
Q |
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| T |
28416352 |
gatgaagagcaggagcagacaaatttgttctttcaaaatcttgtgagtgatccacctgaaccagtgatttgggcacttgtctaacccaaattttatgtta |
28416253 |
T |
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| Q |
119 |
ttttgttatgtagtttgatttcttaatttctgccatttcccttatgttgagttagactcttaatg |
183 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28416252 |
ttttgttatgtagtttgatttcttaatttctgccatttcccttatgttgagttagactcttaatg |
28416188 |
T |
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