View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10233A_low_95 (Length: 314)

Name: NF10233A_low_95
Description: NF10233A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10233A_low_95
NF10233A_low_95
[»] chr8 (87 HSPs)
chr8 (187-303)||(6573787-6573906)
chr8 (188-302)||(22207407-22207524)
chr8 (188-307)||(17979182-17979304)
chr8 (187-309)||(36405748-36405873)
chr8 (188-309)||(18819557-18819681)
chr8 (188-298)||(18815648-18815761)
chr8 (187-309)||(38988525-38988650)
chr8 (187-309)||(39019622-39019747)
chr8 (208-309)||(20517885-20517989)
chr8 (209-309)||(22207554-22207657)
chr8 (209-309)||(38988610-38988713)
chr8 (209-309)||(39019707-39019810)
chr8 (209-307)||(38988789-38988890)
chr8 (209-307)||(39019886-39019987)
chr8 (209-306)||(22207491-22207591)
chr8 (208-309)||(22355945-22356049)
chr8 (209-309)||(6573718-6573821)
chr8 (213-309)||(18819368-18819467)
chr8 (209-309)||(20517822-20517925)
chr8 (226-309)||(17979117-17979200)
chr8 (188-298)||(36733341-36733454)
chr8 (239-309)||(17438085-17438155)
chr8 (208-309)||(22344285-22344389)
chr8 (209-309)||(17438022-17438125)
chr8 (252-309)||(23669968-23670025)
chr8 (209-299)||(5080257-5080350)
chr8 (226-309)||(18819494-18819577)
chr8 (238-309)||(38988758-38988829)
chr8 (238-309)||(39019855-39019926)
chr8 (235-309)||(5080223-5080297)
chr8 (235-309)||(23669825-23669899)
chr8 (235-309)||(23883307-23883381)
chr8 (257-307)||(36405687-36405737)
chr8 (236-309)||(18815584-18815657)
chr8 (257-309)||(18833766-18833818)
chr8 (209-309)||(22473811-22473914)
chr8 (191-298)||(22482973-22483083)
chr8 (258-309)||(36728725-36728776)
chr8 (257-307)||(18817164-18817214)
chr8 (252-309)||(5082916-5082973)
chr8 (252-309)||(22473920-22473977)
chr8 (252-309)||(36733214-36733271)
chr8 (236-309)||(36733277-36733350)
chr8 (269-309)||(21677232-21677272)
chr8 (257-309)||(22473988-22474040)
chr8 (269-309)||(23885772-23885812)
chr8 (201-283)||(4381456-4381541)
chr8 (14-69)||(6574028-6574083)
chr8 (252-307)||(18815523-18815578)
chr8 (188-309)||(21513505-21513619)
chr8 (235-294)||(22258941-22259000)
chr8 (252-303)||(23669905-23669956)
chr8 (209-298)||(38988673-38988765)
chr8 (209-298)||(39019770-39019862)
chr8 (260-309)||(22473802-22473851)
chr8 (209-289)||(23669985-23670068)
chr8 (268-309)||(31724195-31724236)
chr8 (258-298)||(5083033-5083073)
chr8 (257-309)||(36728825-36728877)
chr8 (235-298)||(12800574-12800637)
chr8 (252-307)||(18819433-18819488)
chr8 (208-298)||(23885771-23885864)
chr8 (252-298)||(21513625-21513671)
chr8 (257-307)||(22474051-22474101)
chr8 (272-309)||(12800636-12800673)
chr8 (272-309)||(12800671-12800708)
chr8 (272-309)||(31724106-31724143)
chr8 (272-309)||(36728790-36728827)
chr8 (238-302)||(12037972-12038036)
chr8 (209-284)||(22207617-22207695)
chr8 (269-309)||(23883278-23883318)
chr8 (258-298)||(31724142-31724182)
chr8 (14-68)||(5079974-5080027)
chr8 (236-298)||(5082980-5083042)
chr8 (239-293)||(21346117-21346171)
chr8 (239-293)||(23914204-23914258)
chr8 (252-297)||(19936869-19936914)
chr8 (188-221)||(22473761-22473794)
chr8 (257-298)||(36728671-36728712)
chr8 (269-309)||(4381493-4381533)
chr8 (209-280)||(6573684-6573758)
chr8 (269-309)||(6573844-6573884)
chr8 (269-309)||(17979243-17979283)
chr8 (269-309)||(18815700-18815740)
chr8 (269-309)||(22482991-22483031)
chr8 (269-309)||(36728618-36728658)
chr8 (269-309)||(36733393-36733433)
[»] chr7 (71 HSPs)
chr7 (188-306)||(15120013-15120134)
chr7 (226-309)||(37538473-37538556)
chr7 (209-308)||(33556882-33556983)
chr7 (226-309)||(25941702-25941785)
chr7 (239-309)||(8851864-8851934)
chr7 (209-298)||(15119958-15120050)
chr7 (235-309)||(37538636-37538710)
chr7 (236-309)||(13745544-13745617)
chr7 (209-305)||(15576535-15576634)
chr7 (209-309)||(25941556-25941659)
chr7 (209-309)||(38294616-38294719)
chr7 (235-306)||(25941648-25941719)
chr7 (238-309)||(36301524-36301595)
chr7 (208-309)||(43747667-43747761)
chr7 (226-309)||(43747741-43747824)
chr7 (252-307)||(48213635-48213690)
chr7 (235-309)||(8470937-8471011)
chr7 (239-309)||(9743770-9743840)
chr7 (188-309)||(9743833-9743957)
chr7 (210-307)||(20253044-20253144)
chr7 (239-309)||(20619563-20619633)
chr7 (239-309)||(25941526-25941596)
chr7 (209-310)||(8470737-8470841)
chr7 (257-310)||(8472759-8472812)
chr7 (209-309)||(9743707-9743810)
chr7 (209-309)||(13745481-13745584)
chr7 (226-307)||(15576596-15576677)
chr7 (226-307)||(15576659-15576740)
chr7 (252-309)||(38294599-38294656)
chr7 (257-309)||(15576720-15576772)
chr7 (235-309)||(8473038-8473111)
chr7 (209-298)||(38294679-38294771)
chr7 (236-309)||(20253217-20253290)
chr7 (252-309)||(33556944-33557000)
chr7 (261-309)||(8470729-8470777)
chr7 (209-302)||(8473072-8473167)
chr7 (269-309)||(30237042-30237082)
chr7 (252-307)||(14981491-14981546)
chr7 (252-307)||(15410967-15411022)
chr7 (235-298)||(36301472-36301535)
chr7 (235-309)||(8471262-8471336)
chr7 (257-299)||(14929099-14929141)
chr7 (257-299)||(15352565-15352607)
chr7 (252-309)||(4691596-4691653)
chr7 (257-310)||(8471113-8471166)
chr7 (257-309)||(13133951-13134004)
chr7 (235-307)||(14153599-14153671)
chr7 (235-293)||(8514384-8514442)
chr7 (252-309)||(47976263-47976320)
chr7 (264-297)||(48213708-48213741)
chr7 (257-309)||(20253333-20253385)
chr7 (235-298)||(8472930-8472993)
chr7 (260-298)||(13745608-13745646)
chr7 (239-293)||(14258632-14258686)
chr7 (239-293)||(16460650-16460704)
chr7 (239-293)||(16579940-16579994)
chr7 (239-293)||(16585669-16585723)
chr7 (252-306)||(20253108-20253162)
chr7 (239-293)||(20487723-20487777)
chr7 (257-307)||(47093822-47093872)
chr7 (187-221)||(48213752-48213786)
chr7 (226-283)||(4691559-4691616)
chr7 (272-309)||(13133916-13133953)
chr7 (188-221)||(15576839-15576872)
chr7 (210-298)||(20253281-20253372)
chr7 (269-298)||(38294563-38294592)
chr7 (14-69)||(11314153-11314209)
chr7 (14-69)||(13746011-13746067)
chr7 (14-69)||(13746099-13746155)
chr7 (269-309)||(15120073-15120113)
chr7 (257-309)||(15576783-15576835)
[»] chr5 (60 HSPs)
chr5 (190-309)||(26761669-26761791)
chr5 (188-302)||(8833930-8834047)
chr5 (188-307)||(14026636-14026758)
chr5 (187-309)||(16062617-16062742)
chr5 (225-309)||(26749330-26749414)
chr5 (188-309)||(660158-660282)
chr5 (226-309)||(8833860-8833943)
chr5 (235-309)||(16062829-16062903)
chr5 (209-309)||(21399708-21399811)
chr5 (188-298)||(1628208-1628321)
chr5 (188-309)||(20198482-20198596)
chr5 (188-289)||(18743774-18743878)
chr5 (235-309)||(21399771-21399845)
chr5 (208-309)||(21503270-21503374)
chr5 (209-309)||(26749374-26749477)
chr5 (226-309)||(20198293-20198376)
chr5 (235-309)||(16062766-16062840)
chr5 (257-307)||(26749488-26749538)
chr5 (252-307)||(20198358-20198413)
chr5 (226-309)||(20198419-20198502)
chr5 (257-308)||(30613362-30613413)
chr5 (235-309)||(23200129-23200203)
chr5 (208-309)||(26749247-26749351)
chr5 (236-309)||(1628144-1628217)
chr5 (252-309)||(18743891-18743948)
chr5 (252-309)||(21399869-21399926)
chr5 (260-309)||(21401741-21401790)
chr5 (210-297)||(14026583-14026673)
chr5 (226-298)||(21399933-21400005)
chr5 (252-308)||(30611370-30611426)
chr5 (252-307)||(1628083-1628138)
chr5 (252-307)||(14026510-14026565)
chr5 (208-305)||(8504498-8504598)
chr5 (260-309)||(30613468-30613517)
chr5 (252-309)||(30613668-30613725)
chr5 (260-299)||(30611481-30611520)
chr5 (252-298)||(18743954-18744000)
chr5 (275-309)||(21399985-21400019)
chr5 (272-309)||(16062740-16062777)
chr5 (272-309)||(20312471-20312508)
chr5 (269-309)||(1628260-1628300)
chr5 (209-284)||(8833822-8833900)
chr5 (269-309)||(8833986-8834026)
chr5 (269-309)||(14026697-14026737)
chr5 (14-69)||(16062434-16062490)
chr5 (187-223)||(16605267-16605303)
chr5 (14-69)||(21401940-21401996)
chr5 (209-284)||(26761751-26761829)
chr5 (252-299)||(30611536-30611583)
chr5 (252-299)||(30611741-30611788)
chr5 (260-299)||(30613613-30613652)
chr5 (257-299)||(30611582-30611624)
chr5 (257-299)||(30613569-30613611)
chr5 (252-297)||(20917765-20917810)
chr5 (188-221)||(22110953-22110986)
chr5 (226-299)||(30613497-30613570)
chr5 (226-299)||(30613705-30613778)
chr5 (269-309)||(8504557-8504597)
chr5 (269-309)||(18743795-18743835)
chr5 (188-224)||(19076444-19076480)
[»] chr2 (59 HSPs)
chr2 (188-306)||(25085645-25085766)
chr2 (226-309)||(21316411-21316494)
chr2 (226-309)||(21336304-21336387)
chr2 (209-309)||(25587391-25587494)
chr2 (226-309)||(25587454-25587537)
chr2 (235-309)||(21368274-21368348)
chr2 (209-298)||(21368308-21368400)
chr2 (235-309)||(28345826-28345900)
chr2 (190-298)||(21336454-21336565)
chr2 (226-309)||(1384386-1384469)
chr2 (226-309)||(14184150-14184233)
chr2 (239-309)||(22686065-22686135)
chr2 (252-309)||(14184433-14184490)
chr2 (188-298)||(21316561-21316674)
chr2 (258-309)||(25140573-25140624)
chr2 (259-309)||(21336367-21336417)
chr2 (236-298)||(21368391-21368453)
chr2 (267-309)||(36735245-36735287)
chr2 (208-293)||(36736885-36736973)
chr2 (209-305)||(14180222-14180318)
chr2 (257-309)||(14180428-14180480)
chr2 (257-309)||(14184085-14184137)
chr2 (257-309)||(14184368-14184420)
chr2 (225-309)||(14184512-14184596)
chr2 (257-309)||(25140508-25140560)
chr2 (269-309)||(28346010-28346050)
chr2 (235-298)||(23799482-23799545)
chr2 (259-309)||(21316474-21316524)
chr2 (236-309)||(14184213-14184286)
chr2 (257-309)||(14180341-14180393)
chr2 (269-309)||(36736932-36736972)
chr2 (235-294)||(22690036-22690095)
chr2 (235-294)||(22694632-22694691)
chr2 (14-69)||(45679461-45679516)
chr2 (235-293)||(20915460-20915518)
chr2 (261-307)||(25140412-25140458)
chr2 (272-309)||(1384449-1384486)
chr2 (272-309)||(10744283-10744320)
chr2 (260-309)||(14184575-14184624)
chr2 (257-298)||(23799451-23799492)
chr2 (269-309)||(21336506-21336546)
chr2 (225-309)||(21368201-21368285)
chr2 (25-69)||(25085472-25085516)
chr2 (257-309)||(25140344-25140396)
chr2 (14-69)||(45679504-45679560)
chr2 (274-309)||(25140460-25140495)
chr2 (239-293)||(9784862-9784916)
chr2 (260-298)||(22686149-22686187)
chr2 (257-307)||(25140637-25140687)
chr2 (188-221)||(1384556-1384589)
chr2 (257-298)||(10744229-10744270)
chr2 (14-70)||(22685722-22685779)
chr2 (239-296)||(23069165-23069222)
chr2 (252-297)||(38967625-38967670)
chr2 (270-298)||(14180494-14180522)
chr2 (269-309)||(25085666-25085706)
chr2 (209-284)||(25085729-25085807)
chr2 (209-284)||(36735207-36735285)
chr2 (14-69)||(45679394-45679450)
[»] scaffold0462 (6 HSPs)
scaffold0462 (188-306)||(559-680)
scaffold0462 (188-306)||(6065-6186)
scaffold0462 (209-307)||(643-744)
scaffold0462 (209-307)||(6149-6250)
scaffold0462 (269-309)||(580-620)
scaffold0462 (269-309)||(6086-6126)
[»] chr3 (71 HSPs)
chr3 (188-298)||(17044242-17044355)
chr3 (187-309)||(17207375-17207500)
chr3 (188-284)||(53646684-53646783)
chr3 (188-309)||(24545824-24545948)
chr3 (208-309)||(3528181-3528285)
chr3 (208-309)||(25201202-25201306)
chr3 (209-309)||(12540567-12540670)
chr3 (209-309)||(17207586-17207689)
chr3 (210-309)||(14519578-14519680)
chr3 (209-308)||(3527991-3528090)
chr3 (209-309)||(17207523-17207626)
chr3 (226-309)||(21846296-21846379)
chr3 (260-309)||(12540558-12540607)
chr3 (252-309)||(30175229-30175286)
chr3 (257-309)||(15025909-15025961)
chr3 (257-305)||(21846184-21846232)
chr3 (257-309)||(25201370-25201422)
chr3 (252-308)||(50351858-50351914)
chr3 (258-309)||(16180343-16180394)
chr3 (226-309)||(22842347-22842430)
chr3 (260-309)||(54331006-54331055)
chr3 (238-309)||(33564450-33564519)
chr3 (236-305)||(54331064-54331135)
chr3 (188-274)||(1208733-1208822)
chr3 (258-309)||(11191567-11191618)
chr3 (188-309)||(54331125-54331239)
chr3 (209-298)||(25201266-25201358)
chr3 (252-309)||(6806279-6806336)
chr3 (252-309)||(50351731-50351788)
chr3 (257-309)||(14519565-14519617)
chr3 (229-309)||(24553691-24553771)
chr3 (229-309)||(24556741-24556821)
chr3 (252-308)||(50351795-50351851)
chr3 (209-309)||(3528121-3528221)
chr3 (235-298)||(11191490-11191553)
chr3 (209-307)||(12540630-12540730)
chr3 (226-297)||(17207480-17207551)
chr3 (239-298)||(40812120-40812179)
chr3 (187-229)||(15565749-15565791)
chr3 (226-284)||(33564499-33564557)
chr3 (14-64)||(53646911-53646961)
chr3 (237-298)||(12470080-12470141)
chr3 (252-293)||(18700191-18700232)
chr3 (262-299)||(50756158-50756195)
chr3 (269-309)||(1208761-1208801)
chr3 (258-298)||(11562164-11562204)
chr3 (269-309)||(12918146-12918186)
chr3 (258-298)||(16180290-16180330)
chr3 (269-309)||(21846359-21846399)
chr3 (271-303)||(24178602-24178634)
chr3 (237-309)||(24553217-24553289)
chr3 (261-309)||(24553343-24553391)
chr3 (237-309)||(24553565-24553637)
chr3 (237-309)||(24556330-24556402)
chr3 (261-309)||(24556393-24556441)
chr3 (237-309)||(24556615-24556687)
chr3 (251-299)||(50756095-50756143)
chr3 (257-307)||(11191656-11191706)
chr3 (239-293)||(14671104-14671158)
chr3 (239-293)||(14682603-14682657)
chr3 (258-309)||(3528053-3528101)
chr3 (268-309)||(11562110-11562151)
chr3 (272-309)||(11562203-11562240)
chr3 (252-297)||(11913916-11913961)
chr3 (14-70)||(12540318-12540375)
chr3 (252-297)||(25237042-25237087)
chr3 (226-283)||(54330969-54331026)
chr3 (269-309)||(15565771-15565811)
chr3 (188-220)||(22842454-22842486)
chr3 (188-220)||(45804244-45804276)
chr3 (188-220)||(50351914-50351946)
[»] scaffold0051 (3 HSPs)
scaffold0051 (188-309)||(64731-64855)
scaffold0051 (14-69)||(64996-65051)
scaffold0051 (209-281)||(64696-64771)
[»] chr6 (33 HSPs)
chr6 (191-309)||(29044429-29044550)
chr6 (208-307)||(35056586-35056688)
chr6 (235-309)||(20411357-20411431)
chr6 (196-309)||(21680624-21680740)
chr6 (252-309)||(10445381-10445438)
chr6 (252-309)||(13284939-13284996)
chr6 (252-309)||(35056749-35056806)
chr6 (188-295)||(22556371-22556481)
chr6 (226-309)||(25920998-25921081)
chr6 (236-309)||(32259088-32259161)
chr6 (257-309)||(18584919-18584971)
chr6 (210-309)||(19957634-19957736)
chr6 (209-309)||(13284956-13285056)
chr6 (226-309)||(25920935-25921018)
chr6 (209-307)||(20411299-20411397)
chr6 (252-309)||(22556482-22556539)
chr6 (209-297)||(35056650-35056741)
chr6 (238-309)||(18928044-18928113)
chr6 (269-309)||(35056587-35056627)
chr6 (226-309)||(22556519-22556602)
chr6 (257-309)||(19957569-19957621)
chr6 (207-307)||(18455773-18455876)
chr6 (209-309)||(29044510-29044613)
chr6 (257-309)||(19957697-19957749)
chr6 (269-309)||(22556392-22556432)
chr6 (239-293)||(19773427-19773481)
chr6 (252-297)||(15875557-15875602)
chr6 (188-221)||(19957753-19957786)
chr6 (273-302)||(23655524-23655553)
chr6 (209-284)||(18928073-18928151)
chr6 (188-224)||(21686555-21686591)
chr6 (257-309)||(23492661-23492713)
chr6 (257-309)||(23498259-23498311)
[»] chr1 (45 HSPs)
chr1 (188-309)||(7321614-7321738)
chr1 (188-309)||(50543827-50543951)
chr1 (187-307)||(14793189-14793312)
chr1 (196-309)||(18120714-18120830)
chr1 (188-309)||(28477471-28477595)
chr1 (188-309)||(24720520-24720644)
chr1 (187-309)||(39060318-39060443)
chr1 (188-309)||(6833442-6833566)
chr1 (257-307)||(21244583-21244633)
chr1 (239-309)||(22824111-22824181)
chr1 (252-309)||(50544146-50544203)
chr1 (226-309)||(18120810-18120893)
chr1 (226-309)||(48301196-48301279)
chr1 (236-302)||(12710163-12710229)
chr1 (235-309)||(14793780-14793853)
chr1 (239-309)||(48301146-48301216)
chr1 (252-309)||(34392163-34392220)
chr1 (209-296)||(7321564-7321654)
chr1 (252-307)||(18120899-18120954)
chr1 (226-309)||(50543931-50544014)
chr1 (239-309)||(21244644-21244714)
chr1 (257-307)||(44891823-44891873)
chr1 (236-309)||(24720394-24720467)
chr1 (260-309)||(25262932-25262981)
chr1 (260-309)||(45496243-45496292)
chr1 (252-309)||(50544020-50544077)
chr1 (257-309)||(17902497-17902549)
chr1 (252-303)||(50544083-50544134)
chr1 (236-309)||(24720457-24720530)
chr1 (252-309)||(44891755-44891812)
chr1 (257-309)||(17902432-17902484)
chr1 (257-309)||(17903787-17903839)
chr1 (24-69)||(6833209-6833254)
chr1 (257-293)||(635867-635903)
chr1 (257-309)||(14793892-14793944)
chr1 (269-309)||(23073193-23073233)
chr1 (209-283)||(50544163-50544240)
chr1 (187-221)||(25262989-25263023)
chr1 (272-309)||(1642908-1642945)
chr1 (188-221)||(17903843-17903876)
chr1 (252-297)||(29298440-29298485)
chr1 (188-221)||(45496202-45496235)
chr1 (235-283)||(6833555-6833603)
chr1 (269-309)||(11809288-11809328)
chr1 (269-309)||(14793250-14793290)
[»] scaffold0125 (3 HSPs)
scaffold0125 (188-309)||(27523-27647)
scaffold0125 (25-69)||(27307-27352)
scaffold0125 (269-310)||(27544-27585)
[»] chr4 (53 HSPs)
chr4 (188-309)||(12622611-12622735)
chr4 (208-309)||(13164365-13164469)
chr4 (208-309)||(10272747-10272851)
chr4 (188-309)||(45315037-45315160)
chr4 (188-309)||(46740311-46740435)
chr4 (209-309)||(14508010-14508113)
chr4 (188-309)||(19566682-19566806)
chr4 (236-309)||(19566619-19566692)
chr4 (226-307)||(40229646-40229727)
chr4 (226-309)||(26445149-26445232)
chr4 (226-309)||(55582466-55582548)
chr4 (188-309)||(14507800-14507924)
chr4 (235-309)||(14629325-14629399)
chr4 (239-309)||(15041830-15041900)
chr4 (239-309)||(15112524-15112594)
chr4 (235-309)||(25513016-25513090)
chr4 (236-309)||(14507914-14507987)
chr4 (226-307)||(46740542-46740623)
chr4 (238-309)||(9923517-9923586)
chr4 (226-309)||(46740415-46740499)
chr4 (252-307)||(26013493-26013548)
chr4 (252-307)||(46740505-46740560)
chr4 (267-309)||(11479273-11479315)
chr4 (257-307)||(12622746-12622796)
chr4 (235-309)||(14507976-14508050)
chr4 (257-307)||(44024231-44024281)
chr4 (252-309)||(13164524-13164581)
chr4 (188-303)||(2425326-2425444)
chr4 (269-309)||(9621669-9621709)
chr4 (257-309)||(35660145-35660197)
chr4 (235-295)||(44024736-44024796)
chr4 (252-307)||(14629460-14629515)
chr4 (235-298)||(35660047-35660110)
chr4 (252-298)||(25512940-25512986)
chr4 (252-298)||(26922454-26922500)
chr4 (208-284)||(9621668-9621747)
chr4 (252-309)||(26445112-26445169)
chr4 (257-298)||(13164588-13164629)
chr4 (252-309)||(44024292-44024349)
chr4 (209-284)||(9923546-9923624)
chr4 (267-303)||(10272868-10272904)
chr4 (267-303)||(26922351-26922387)
chr4 (272-308)||(35660109-35660145)
chr4 (209-283)||(35660157-35660234)
chr4 (267-309)||(46225368-46225410)
chr4 (226-284)||(55582528-55582586)
chr4 (238-295)||(46225319-46225376)
chr4 (209-284)||(11479235-11479313)
chr4 (188-220)||(25512708-25512740)
chr4 (269-309)||(40229626-40229666)
chr4 (29-69)||(44024489-44024529)
chr4 (14-69)||(45315285-45315341)
chr4 (188-220)||(55582410-55582442)
[»] scaffold0086 (4 HSPs)
scaffold0086 (209-309)||(36262-36365)
scaffold0086 (252-309)||(36325-36382)
scaffold0086 (209-299)||(36209-36302)
scaffold0086 (269-308)||(36391-36430)
[»] scaffold0004 (7 HSPs)
scaffold0004 (188-310)||(66833-66958)
scaffold0004 (236-309)||(66737-66810)
scaffold0004 (261-307)||(74767-74813)
scaffold0004 (14-69)||(67177-67232)
scaffold0004 (14-69)||(67220-67275)
scaffold0004 (14-70)||(67131-67189)
scaffold0004 (261-307)||(65300-65346)
[»] scaffold0639 (2 HSPs)
scaffold0639 (209-309)||(7294-7397)
scaffold0639 (239-309)||(7357-7427)
[»] scaffold0063 (3 HSPs)
scaffold0063 (196-297)||(61966-62070)
scaffold0063 (257-307)||(62093-62143)
scaffold0063 (269-309)||(61979-62019)
[»] scaffold0032 (1 HSPs)
scaffold0032 (188-309)||(62851-62975)
[»] scaffold1256 (2 HSPs)
scaffold1256 (190-309)||(130-252)
scaffold1256 (252-309)||(67-124)
[»] scaffold0213 (4 HSPs)
scaffold0213 (196-299)||(18296-18402)
scaffold0213 (267-309)||(18474-18516)
scaffold0213 (209-283)||(18476-18553)
scaffold0213 (262-304)||(18428-18470)
[»] scaffold0162 (2 HSPs)
scaffold0162 (235-307)||(24694-24766)
scaffold0162 (209-307)||(24631-24732)
[»] scaffold1354 (1 HSPs)
scaffold1354 (208-309)||(399-503)
[»] scaffold1186 (3 HSPs)
scaffold1186 (235-309)||(174-248)
scaffold1186 (252-307)||(345-400)
scaffold1186 (272-309)||(246-284)
[»] scaffold0170 (1 HSPs)
scaffold0170 (239-309)||(3139-3209)
[»] scaffold0048 (1 HSPs)
scaffold0048 (190-307)||(56281-56401)
[»] scaffold0020 (3 HSPs)
scaffold0020 (239-309)||(142764-142834)
scaffold0020 (209-309)||(142794-142897)
scaffold0020 (226-309)||(142877-142960)
[»] scaffold0011 (2 HSPs)
scaffold0011 (235-309)||(40305-40379)
scaffold0011 (272-309)||(40377-40414)
[»] scaffold0123 (1 HSPs)
scaffold0123 (190-298)||(16178-16288)
[»] scaffold0054 (3 HSPs)
scaffold0054 (202-309)||(65694-65804)
scaffold0054 (209-298)||(65642-65734)
scaffold0054 (268-307)||(66337-66376)
[»] scaffold0507 (1 HSPs)
scaffold0507 (239-309)||(2539-2609)
[»] scaffold0203 (1 HSPs)
scaffold0203 (188-309)||(18931-19055)
[»] scaffold0005 (2 HSPs)
scaffold0005 (235-309)||(187984-188058)
scaffold0005 (252-307)||(187868-187923)
[»] scaffold0505 (6 HSPs)
scaffold0505 (260-309)||(1919-1968)
scaffold0505 (268-309)||(3947-3988)
scaffold0505 (209-288)||(1928-2010)
scaffold0505 (209-288)||(3948-4030)
scaffold0505 (188-221)||(1878-1911)
scaffold0505 (188-221)||(3898-3931)
[»] scaffold0379 (2 HSPs)
scaffold0379 (187-295)||(9933-10044)
scaffold0379 (269-309)||(9955-9995)
[»] scaffold0113 (2 HSPs)
scaffold0113 (252-309)||(33816-33873)
scaffold0113 (257-307)||(33886-33936)
[»] scaffold0108 (5 HSPs)
scaffold0108 (226-307)||(7548-7629)
scaffold0108 (252-309)||(7609-7666)
scaffold0108 (226-309)||(7482-7566)
scaffold0108 (188-221)||(7728-7761)
scaffold0108 (257-309)||(7672-7724)
[»] scaffold0261 (1 HSPs)
scaffold0261 (235-307)||(7221-7293)
[»] scaffold0231 (5 HSPs)
scaffold0231 (210-309)||(18468-18570)
scaffold0231 (226-309)||(18342-18425)
scaffold0231 (226-307)||(18407-18488)
scaffold0231 (226-307)||(18281-18362)
scaffold0231 (257-309)||(18531-18583)
[»] scaffold0230 (4 HSPs)
scaffold0230 (257-309)||(7554-7606)
scaffold0230 (14-67)||(7807-7861)
scaffold0230 (14-70)||(7892-7949)
scaffold0230 (24-69)||(7937-7982)
[»] scaffold0111 (2 HSPs)
scaffold0111 (239-307)||(7612-7680)
scaffold0111 (239-307)||(14731-14799)
[»] scaffold1539 (2 HSPs)
scaffold1539 (226-309)||(1171-1254)
scaffold1539 (239-309)||(1121-1191)
[»] scaffold0401 (2 HSPs)
scaffold0401 (201-307)||(8135-8244)
scaffold0401 (29-69)||(7906-7946)
[»] scaffold0335 (2 HSPs)
scaffold0335 (267-309)||(1052-1094)
scaffold0335 (209-284)||(1054-1132)
[»] scaffold0802 (2 HSPs)
scaffold0802 (238-309)||(5329-5398)
scaffold0802 (226-284)||(5291-5349)
[»] scaffold0056 (4 HSPs)
scaffold0056 (269-309)||(15840-15880)
scaffold0056 (24-69)||(15379-15424)
scaffold0056 (13-69)||(15587-15644)
scaffold0056 (25-69)||(15643-15688)
[»] scaffold0019 (1 HSPs)
scaffold0019 (239-299)||(29383-29443)
[»] scaffold1223 (4 HSPs)
scaffold1223 (235-298)||(578-641)
scaffold1223 (272-309)||(542-579)
scaffold1223 (257-309)||(477-529)
scaffold1223 (272-307)||(444-479)
[»] scaffold0730 (2 HSPs)
scaffold0730 (252-307)||(7219-7274)
scaffold0730 (252-306)||(7157-7211)
[»] scaffold0205 (1 HSPs)
scaffold0205 (252-299)||(29848-29895)
[»] scaffold0148 (2 HSPs)
scaffold0148 (252-306)||(8252-8306)
scaffold0148 (238-310)||(8175-8247)
[»] scaffold1160 (2 HSPs)
scaffold1160 (260-309)||(1-49)
scaffold1160 (226-307)||(29-110)
[»] scaffold0371 (2 HSPs)
scaffold0371 (188-284)||(11071-11170)
scaffold0371 (267-309)||(11109-11151)
[»] scaffold0121 (1 HSPs)
scaffold0121 (260-309)||(19365-19414)
[»] scaffold0026 (2 HSPs)
scaffold0026 (252-309)||(20567-20624)
scaffold0026 (252-309)||(23669-23726)
[»] scaffold0628 (4 HSPs)
scaffold0628 (257-309)||(4312-4364)
scaffold0628 (257-309)||(8872-8924)
scaffold0628 (188-221)||(4368-4401)
scaffold0628 (188-221)||(8928-8961)
[»] scaffold0174 (7 HSPs)
scaffold0174 (235-307)||(15365-15437)
scaffold0174 (239-298)||(15316-15375)
scaffold0174 (267-307)||(4317-4357)
scaffold0174 (267-307)||(10439-10479)
scaffold0174 (14-69)||(15054-15110)
scaffold0174 (260-298)||(15284-15322)
scaffold0174 (14-69)||(15010-15066)
[»] scaffold0035 (2 HSPs)
scaffold0035 (269-309)||(39904-39944)
scaffold0035 (269-309)||(44559-44599)
[»] scaffold0045 (1 HSPs)
scaffold0045 (235-294)||(46657-46716)
[»] scaffold0645 (3 HSPs)
scaffold0645 (258-298)||(491-531)
scaffold0645 (272-309)||(455-492)
scaffold0645 (268-309)||(544-585)
[»] scaffold0577 (2 HSPs)
scaffold0577 (257-309)||(7953-8005)
scaffold0577 (187-221)||(7915-7949)
[»] scaffold0178 (1 HSPs)
scaffold0178 (257-309)||(515-567)
[»] scaffold0369 (1 HSPs)
scaffold0369 (236-295)||(16689-16748)
[»] scaffold0575 (1 HSPs)
scaffold0575 (239-293)||(6044-6098)
[»] scaffold0452 (1 HSPs)
scaffold0452 (239-293)||(13383-13437)
[»] scaffold1098 (1 HSPs)
scaffold1098 (252-309)||(853-910)
[»] scaffold0034 (1 HSPs)
scaffold0034 (252-293)||(120203-120244)
[»] scaffold0256 (1 HSPs)
scaffold0256 (226-298)||(3194-3266)


Alignment Details
Target: chr8 (Bit Score: 90; Significance: 2e-43; HSPs: 87)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 187 - 303
Target Start/End: Complemental strand, 6573906 - 6573787
Alignment:
Q  187 gacgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatca 283  Q
    |||||||||||||||||||| ||||||||||||||||||||||   |||||||||||||| ||| || ||||||||||||||||||||||||||||||||    
T  6573906 gacgactttgcatcataatatcataattcatcaattatgaacaacatcacgtaacatcatattcatcaacatgtacattcatgtaataattcatcaatca 6573807  T
Q  284 tgaacaacatcatataacat 303  Q
    ||||||||||||||||||||    
T  6573806 tgaacaacatcatataacat 6573787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 188 - 302
Target Start/End: Original strand, 22207407 - 22207524
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    ||||||||||||||||||| ||||||||||||||||||||||   |||||||||||||  ||| || | |||||||||||||||||||||||||||||||    
T  22207407 acgactttgcatcataatatcataattcatcaattatgaacaacatcacgtaacatcacattcatcaaaatgtacattcatgtaataattcatcaatcat 22207506  T
Q  285 gaacaacatcatataaca 302  Q
    ||||||||||||||||||    
T  22207507 gaacaacatcatataaca 22207524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 188 - 307
Target Start/End: Complemental strand, 17979304 - 17979182
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    ||||||| ||||||||||| ||||||||||||||||| ||||   ||| |||||||||| ||| || |||| ||||||||| ||||| ||||||||||||    
T  17979304 acgacttcgcatcataatatcataattcatcaattataaacaacatcatgtaacatcatattcatcaacatatacattcatataatacttcatcaatcat 17979205  T
Q  285 gaacaacatcatataacatcata 307  Q
    |||||||||||||||||||||||    
T  17979204 gaacaacatcatataacatcata 17979182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 187 - 309
Target Start/End: Complemental strand, 36405873 - 36405748
Alignment:
Q  187 gacgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatca 283  Q
    |||||||| ||||||||||| |||||||||| |||||||||||   ||| |||||||||| ||| || |||| ||||||||| |||||||||||||||||    
T  36405873 gacgacttcgcatcataatatcataattcattaattatgaacaacatcatgtaacatcatattcatcaacatatacattcatataataattcatcaatca 36405774  T
Q  284 tgaacaacatcatataacatcatatt 309  Q
    ||||||||||||||  ||||||||||    
T  36405773 tgaacaacatcataggacatcatatt 36405748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 188 - 309
Target Start/End: Complemental strand, 18819681 - 18819557
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    ||||||||||||||||||| |||||||||||| |||||||||   ||| |||||||||| ||| || |||| ||| ||||| ||||| ||||| ||||||    
T  18819681 acgactttgcatcataatatcataattcatcagttatgaacaacatcatgtaacatcatattcatcaacatataccttcatataatacttcattaatcat 18819582  T
Q  285 gaacaacatcatataacatcatatt 309  Q
    |||||||||||||||||||||||||    
T  18819581 gaacaacatcatataacatcatatt 18819557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 188 - 298
Target Start/End: Complemental strand, 18815761 - 18815648
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    ||||||||||||||||||| |||||||||||||||| |||||   ||| |||||||||| ||| || |||| ||| ||||| ||||| ||||||||||||    
T  18815761 acgactttgcatcataatatcataattcatcaattacgaacaacatcatgtaacatcatattcatcaacatataccttcatataatacttcatcaatcat 18815662  T
Q  285 gaacaacatcatat 298  Q
    ||||||||||||||    
T  18815661 gaacaacatcatat 18815648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 187 - 309
Target Start/End: Original strand, 38988525 - 38988650
Alignment:
Q  187 gacgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatca 283  Q
    |||||||| ||||||||||| ||||||||||||||||| ||||   ||| ||||| |||| ||| || | || ||||||||| |||||||||||||||||    
T  38988525 gacgacttcgcatcataatatcataattcatcaattataaacaacatcatgtaacctcatattcatcaatatatacattcatataataattcatcaatca 38988624  T
Q  284 tgaacaacatcatataacatcatatt 309  Q
    |||| |||||||| ||||||||||||    
T  38988625 tgaataacatcatgtaacatcatatt 38988650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 187 - 309
Target Start/End: Original strand, 39019622 - 39019747
Alignment:
Q  187 gacgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatca 283  Q
    |||||||| ||||||||||| ||||||||||||||||| ||||   ||| ||||| |||| ||| || | || ||||||||| |||||||||||||||||    
T  39019622 gacgacttcgcatcataatatcataattcatcaattataaacaacatcatgtaacctcatattcatcaatatatacattcatataataattcatcaatca 39019721  T
Q  284 tgaacaacatcatataacatcatatt 309  Q
    |||| |||||||| ||||||||||||    
T  39019722 tgaataacatcatgtaacatcatatt 39019747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 20517989 - 20517885
Alignment:
Q  208 cataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatc 304  Q
    |||||||||||||| |||||||   |||  ||||||||| ||| || |||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  20517989 cataattcatcaatcatgaacaacatcatataacatcatattcatcaacatatacattcatataataattcatcaatcatgaacaacatcatataacatc 20517890  T
Q  305 atatt 309  Q
    |||||    
T  20517889 atatt 20517885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 209 - 309
Target Start/End: Original strand, 22207554 - 22207657
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatca 305  Q
    ||||||||||||| |||||||   |||  ||||||||||||| || ||||  |||||||| |||||||||||||||||||||||||||||||||||||||    
T  22207554 ataattcatcaatcatgaacaacatcatataacatcattttcatcaacatacacattcatataataattcatcaatcatgaacaacatcatataacatca 22207653  T
Q  306 tatt 309  Q
    ||||    
T  22207654 tatt 22207657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 209 - 309
Target Start/End: Original strand, 38988610 - 38988713
Alignment:
Q  209 ataattcatcaattatgaa---catcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatca 305  Q
    ||||||||||||| |||||   ||||| |||||||||| ||| || |||| ||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  38988610 ataattcatcaatcatgaataacatcatgtaacatcatattcatcaacatatacattcatataataattcatcaatcatgaacatcatcatataacatca 38988709  T
Q  306 tatt 309  Q
    ||||    
T  38988710 tatt 38988713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 209 - 309
Target Start/End: Original strand, 39019707 - 39019810
Alignment:
Q  209 ataattcatcaattatgaa---catcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatca 305  Q
    ||||||||||||| |||||   ||||| |||||||||| ||| || |||| ||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  39019707 ataattcatcaatcatgaataacatcatgtaacatcatattcatcaacatatacattcatataataattcatcaatcatgaacatcatcatataacatca 39019806  T
Q  306 tatt 309  Q
    ||||    
T  39019807 tatt 39019810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 209 - 307
Target Start/End: Original strand, 38988789 - 38988890
Alignment:
Q  209 ataattcatcaattatgaacatcacg---taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatca 305  Q
    ||||||||||||| ||||||||||     ||||||||| ||| || |||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  38988789 ataattcatcaatcatgaacatcatcatataacatcatattcatcaacatatacattcatataataattcatcaatcatgaacaacatcatataacatca 38988888  T
Q  306 ta 307  Q
    ||    
T  38988889 ta 38988890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 209 - 307
Target Start/End: Original strand, 39019886 - 39019987
Alignment:
Q  209 ataattcatcaattatgaacatcacg---taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatca 305  Q
    ||||||||||||| ||||||||||     ||||||||| ||| || |||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  39019886 ataattcatcaatcatgaacatcatcatataacatcatattcatcaacatatacattcatataataattcatcaatcatgaacaacatcatataacatca 39019985  T
Q  306 ta 307  Q
    ||    
T  39019986 ta 39019987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 22207491 - 22207591
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatca 305  Q
    ||||||||||||| |||||||   |||  ||||| ||||||| || |||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  22207491 ataattcatcaatcatgaacaacatcatataacaccattttcatcaacatatacattcatataataattcatcaatcatgaacaacatcatataacatca 22207590  T
Q  306 t 306  Q
    |    
T  22207591 t 22207591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 22355945 - 22356049
Alignment:
Q  208 cataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatc 304  Q
    |||||||||||||| |||||||   |||  ||||||||| ||  || |||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22355945 cataattcatcaatcatgaacaacatcatataacatcatatttatcaacatatacattcatataataattcatcaatcatgaacaacatcatataacatc 22356044  T
Q  305 atatt 309  Q
    |||||    
T  22356045 atatt 22356049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 209 - 309
Target Start/End: Complemental strand, 6573821 - 6573718
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatca 305  Q
    ||||||||||||| |||||||   |||  |||||| |||||| || |||| ||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  6573821 ataattcatcaatcatgaacaacatcatataacattattttcatcaacatatacattcatataataattcatcaatcatgaacaatatcatataacatca 6573722  T
Q  306 tatt 309  Q
    ||||    
T  6573721 tatt 6573718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 18819467 - 18819368
Alignment:
Q  213 ttcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||||||||||||   |||  |||||||||  || || |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18819467 ttcatcaattatgaacaatatcatataacatcatactcatcaacatatacattcatataataattcatcaatcatgaacaacatcatataacatcatatt 18819368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 209 - 309
Target Start/End: Complemental strand, 20517925 - 20517822
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatca 305  Q
    ||||||||||||| |||||||   |||  ||||||||| ||| ||||||  ||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  20517925 ataattcatcaatcatgaacaacatcatataacatcatattcatcgacacatacattcatataataattcatcaatcatgagcaacatcatataacatca 20517826  T
Q  306 tatt 309  Q
    ||||    
T  20517825 tatt 20517822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 226 - 309
Target Start/End: Complemental strand, 17979200 - 17979117
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||  |||||||||  || || |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  17979200 aacatcatataacatcatactcgtcaacatatacattcatataataattcatcaatcatgaacaacatcatataacatcatatt 17979117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 188 - 298
Target Start/End: Complemental strand, 36733454 - 36733341
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    |||| |||||||||||||| ||||||||||| ||||||||||   ||| |||||||||| ||| || |||| ||| ||||| ||||| ||||||||||||    
T  36733454 acgaatttgcatcataatatcataattcatctattatgaacaacatcatgtaacatcatattcatcaacatataccttcatataatacttcatcaatcat 36733355  T
Q  285 gaacaacatcatat 298  Q
    ||| ||||||||||    
T  36733354 gaaaaacatcatat 36733341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 17438155 - 17438085
Alignment:
Q  239 atcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||| ||| || |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  17438155 atcatattcatcaacatatacattcatataataattcatcaatcatgaacaacatcatataacatcatatt 17438085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 22344285 - 22344389
Alignment:
Q  208 cataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatc 304  Q
    |||||||||||||| |||||||   |||  ||||||||| ||  || |||| |||||||||  |||||||||||||||||||||||||||||||||||||    
T  22344285 cataattcatcaatcatgaacaacatcatataacatcatatttatcaacatatacattcatacaataattcatcaatcatgaacaacatcatataacatc 22344384  T
Q  305 atatt 309  Q
    |||||    
T  22344385 atatt 22344389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 309
Target Start/End: Complemental strand, 17438125 - 17438022
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatca 305  Q
    ||||||||||||| |||||||   |||  ||||||||| ||| || |||| ||||||||| ||||||||| |||| ||||||||||||||||||||||||    
T  17438125 ataattcatcaatcatgaacaacatcatataacatcatattcatcaacatatacattcatataataattcctcaaccatgaacaacatcatataacatca 17438026  T
Q  306 tatt 309  Q
    ||||    
T  17438025 tatt 17438022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 23669968 - 23670025
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23669968 acatatacattcatataataattcatcaatcatgaacaacatcatataacatcatatt 23670025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 299
Target Start/End: Original strand, 5080257 - 5080350
Alignment:
Q  209 ataattcatcaattatg---aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatata 299  Q
    ||||||||||||| |||   |||||||  ||||||||| ||| || |||| ||||||||| |||||||||||||||||||||||||||||||||    
T  5080257 ataattcatcaatcatggacaacatcatataacatcatattcatcaacatatacattcatctaataattcatcaatcatgaacaacatcatata 5080350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 309
Target Start/End: Complemental strand, 18819577 - 18819494
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||  ||||||||| ||| || |||| ||||||||  |||||||||||||||||||||||||||||||| ||||||||||    
T  18819577 aacatcatataacatcatattcatcaacatatacattcacataataattcatcaatcatgaacaacatcatatgacatcatatt 18819494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 238 - 309
Target Start/End: Original strand, 38988758 - 38988829
Alignment:
Q  238 catcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||| ||| || |||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  38988758 catcatattcatcaacatatacattcatataataattcatcaatcatgaacatcatcatataacatcatatt 38988829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 238 - 309
Target Start/End: Original strand, 39019855 - 39019926
Alignment:
Q  238 catcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||| ||| || |||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  39019855 catcatattcatcaacatatacattcatataataattcatcaatcatgaacatcatcatataacatcatatt 39019926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 235 - 309
Target Start/End: Original strand, 5080223 - 5080297
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||| ||| || |||| ||| ||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  5080223 taacatcatattcatcaacatatactttcatataataattcatcaatcatggacaacatcatataacatcatatt 5080297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 235 - 309
Target Start/End: Original strand, 23669825 - 23669899
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||| ||| || |||| ||||||||| |||||||||||||||||||||||||||||||  ||||||||||    
T  23669825 taacatcatattcatcaacatatacattcatataataattcatcaatcatgaacaacatcataggacatcatatt 23669899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 235 - 309
Target Start/End: Original strand, 23883307 - 23883381
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||| ||| || ||||  |||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  23883307 taacatcatattcatcaacatacacattcatataataattcagcaatcatgaacaacatcatataacatcatatt 23883381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 257 - 307
Target Start/End: Complemental strand, 36405737 - 36405687
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  36405737 tacattcatataataattcatcaatcatgaacaacatcatataacatcata 36405687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 18815657 - 18815584
Alignment:
Q  236 aacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||| ||| || |||| ||||||||  |||||||||||||||||||||||||||||||| ||||||||||    
T  18815657 aacatcatattcatcaacatatacattcacataataattcatcaatcatgaacaacatcatatgacatcatatt 18815584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 18833766 - 18833818
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  18833766 tacattaatataataattcatcaatcatgaacaacatcatataacatcatatt 18833818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 309
Target Start/End: Original strand, 22473811 - 22473914
Alignment:
Q  209 ataattcatcaattatgaacatca-cgtaa--catcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatca 305  Q
    ||||||||||||| ||||||| || | |||  |||||| ||| || |||| ||||||||| |||||||||||||||||||||||||||||||  ||||||    
T  22473811 ataattcatcaatcatgaacaacatcataaatcatcatattcatcaacatatacattcatataataattcatcaatcatgaacaacatcataggacatca 22473910  T
Q  306 tatt 309  Q
    ||||    
T  22473911 tatt 22473914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 191 - 298
Target Start/End: Original strand, 22482973 - 22483083
Alignment:
Q  191 actttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaa 287  Q
    |||||||||||||||| ||||||||||| ||  | ||||   |||  ||||||||| ||| || |||  ||||||||| |||||||||||||||||||||    
T  22482973 actttgcatcataatatcataattcatcgatcgtaaacaacatcatataacatcatattcatcaacaaatacattcatataataattcatcaatcatgaa 22483072  T
Q  288 caacatcatat 298  Q
    |||||||||||    
T  22483073 caacatcatat 22483083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 258 - 309
Target Start/End: Complemental strand, 36728776 - 36728725
Alignment:
Q  258 acattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  36728776 acattcatataataattcataaatcatgaacaacatcatataacatcatatt 36728725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 257 - 307
Target Start/End: Complemental strand, 18817214 - 18817164
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  18817214 tacattcatataataattcatcaatcatgaacaacatcagataacatcata 18817164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 5082973 - 5082916
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||| ||||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  5082973 acatatacattcatataataattcatcaaccatgaacaacattatataacatcatatt 5082916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 22473920 - 22473977
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||| | |||||||||    
T  22473920 acatatacattcatataataattcatcaatcatgaacaacatcataaatcatcatatt 22473977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 36733271 - 36733214
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||| ||||||||| ||||| || ||||||||||||||||||||||||||||||||||    
T  36733271 acatatacattcatataatactttatcaatcatgaacaacatcatataacatcatatt 36733214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 36733350 - 36733277
Alignment:
Q  236 aacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||| ||| || |||| ||||||||| |||||| ||||||||||||||||||||||||  ||||||||||    
T  36733350 aacatcatattcatcaacatatacattcatataataaatcatcaatcatgaacaacatcataggacatcatatt 36733277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 21677272 - 21677232
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  21677272 ataattcatcaatcatgaacaacatcatataacatcatatt 21677232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 22473988 - 22474040
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||| |||||||||||||||||||||||||||||||  ||||||||||    
T  22473988 tacattcatataataattcatcaatcatgaacaacatcataggacatcatatt 22474040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 269 - 309
Target Start/End: Original strand, 23885772 - 23885812
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  23885772 ataattcatcaatcatgaacaacatcatataacatcatatt 23885812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 4381541 - 4381456
Alignment:
Q  201 ataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatca 283  Q
    |||||| ||||||||||||||||||||||   ||| |||| ||||| ||| || |||| ||||||||| |||||||||||||||||    
T  4381541 ataatatcataattcatcaattatgaacaacatcatgtaaaatcatattcatcaacatatacattcatataataattcatcaatca 4381456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 6574083 - 6574028
Alignment:
Q  14 attataaatttcagagcatcaaaccctctgctttaaatgaatgattatacattcca 69  Q
    ||||||||||||||||||||||  ||||  ||||||||||||||||||||||||||    
T  6574083 attataaatttcagagcatcaagtcctcaactttaaatgaatgattatacattcca 6574028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 307
Target Start/End: Complemental strand, 18815578 - 18815523
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    |||| ||||||||| ||||| ||||||||| |||||||||||||||||||||||||    
T  18815578 acatatacattcatataatacttcatcaattatgaacaacatcatataacatcata 18815523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 309
Target Start/End: Original strand, 21513505 - 21513619
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattatgaacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaa 287  Q
    ||||||| ||||||||||| ||||||||||||||||| |||       |||||||| ||  || |||| ||| ||||| ||||| |||||||||||||||    
T  21513505 acgacttcgcatcataatatcataattcatcaattataaac-------aacatcatatttatcaacatataccttcatataatacttcatcaatcatgaa 21513597  T
Q  288 caacatcatataacatcatatt 309  Q
    |||||| ||| |||| ||||||    
T  21513598 caacataatacaacaccatatt 21513619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 294
Target Start/End: Complemental strand, 22259000 - 22258941
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatc 294  Q
    ||||||||| ||| || |||| ||||||||| ||||||||||||||||||||||||||||    
T  22259000 taacatcatattcatcaacatatacattcatataataattcatcaatcatgaacaacatc 22258941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 303
Target Start/End: Original strand, 23669905 - 23669956
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacat 303  Q
    |||| ||||||||| ||||| |||||||||||||||||||||||||||||||    
T  23669905 acatatacattcatataatacttcatcaatcatgaacaacatcatataacat 23669956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 298
Target Start/End: Original strand, 38988673 - 38988765
Alignment:
Q  209 ataattcatcaattatgaacatcacg---taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatat 298  Q
    ||||||||||||| ||||||||||     ||||||||| ||| || |||| || |||||| ||||||||||||||||||||||| ||||||||    
T  38988673 ataattcatcaatcatgaacatcatcatataacatcatattcatcaacatataaattcatataataattcatcaatcatgaacatcatcatat 38988765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 298
Target Start/End: Original strand, 39019770 - 39019862
Alignment:
Q  209 ataattcatcaattatgaacatcacg---taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatat 298  Q
    ||||||||||||| ||||||||||     ||||||||| ||| || |||| || |||||| ||||||||||||||||||||||| ||||||||    
T  39019770 ataattcatcaatcatgaacatcatcatataacatcatattcatcaacatataaattcatataataattcatcaatcatgaacatcatcatat 39019862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 309
Target Start/End: Original strand, 22473802 - 22473851
Alignment:
Q  260 attcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||| ||||||||||||||||||||||||||||||| | |||||||||    
T  22473802 attcatataataattcatcaatcatgaacaacatcataaatcatcatatt 22473851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 289
Target Start/End: Original strand, 23669985 - 23670068
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaaca 289  Q
    ||||||||||||| |||||||   |||  ||||||||| ||| || |||| ||||||||| |||||||||||||||||||||||    
T  23669985 ataattcatcaatcatgaacaacatcatataacatcatattcatcaacatatacattcatataataattcatcaatcatgaaca 23670068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 309
Target Start/End: Complemental strand, 31724236 - 31724195
Alignment:
Q  268 aataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  31724236 aataattcatcaataatgaacaacatcatataacatcatatt 31724195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 258 - 298
Target Start/End: Complemental strand, 5083073 - 5083033
Alignment:
Q  258 acattcatgtaataattcatcaatcatgaacaacatcatat 298  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  5083073 acattcatataataattcatcaatcatgaacaacatcatat 5083033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 36728877 - 36728825
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||| || ||||||||||||||| |||||||||||||||||||| ||||||    
T  36728877 tacatttatataataattcatcaataatgaacaacatcatataacaccatatt 36728825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 298
Target Start/End: Original strand, 12800574 - 12800637
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatat 298  Q
    |||| |||| ||| || |||| ||||||||| ||||||||||||||| ||||||||||||||||    
T  12800574 taacgtcatattcatcaacatatacattcatataataattcatcaataatgaacaacatcatat 12800637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 307
Target Start/End: Complemental strand, 18819488 - 18819433
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    |||| ||||||||| ||||| ||||||||| |||||||| ||||||||||||||||    
T  18819488 acatatacattcatataatacttcatcaattatgaacaatatcatataacatcata 18819433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 298
Target Start/End: Original strand, 23885771 - 23885864
Alignment:
Q  208 cataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatat 298  Q
    |||||||||||||| |||||||   |||  ||||||||| ||| || ||||  || ||||| |||||||||| |||||||||||||||||||||    
T  23885771 cataattcatcaatcatgaacaacatcatataacatcatattcatcaacatacacgttcatataataattcagcaatcatgaacaacatcatat 23885864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 298
Target Start/End: Original strand, 21513625 - 21513671
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatat 298  Q
    |||| ||||||||| ||||| ||||||||||||||||||||||||||    
T  21513625 acatatacattcatataatacttcatcaatcatgaacaacatcatat 21513671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 22474051 - 22474101
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    ||||||||| ||||| ||||||| |||||||||||||||||||| ||||||    
T  22474051 tacattcatataatatttcatcagtcatgaacaacatcatataatatcata 22474101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 272 - 309
Target Start/End: Original strand, 12800636 - 12800673
Alignment:
Q  272 attcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  12800636 attcatcaatcataaacaacatcatataacatcatatt 12800673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 272 - 309
Target Start/End: Original strand, 12800671 - 12800708
Alignment:
Q  272 attcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  12800671 attcatcaatcataaacaacatcatataacatcatatt 12800708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 31724143 - 31724106
Alignment:
Q  272 attcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  31724143 attcatcaatcataaacaacatcatataacatcatatt 31724106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 36728827 - 36728790
Alignment:
Q  272 attcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  36728827 attcatcaatcataaacaacatcatataacatcatatt 36728790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 302
Target Start/End: Complemental strand, 12038036 - 12037972
Alignment:
Q  238 catcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataaca 302  Q
    |||||| ||| || |||| | ||||||| |||||||||||| ||||| |||||||||||||||||    
T  12038036 catcatattcgtcaacatatgcattcatataataattcatcgatcataaacaacatcatataaca 12037972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 22207617 - 22207695
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    ||||||||||||| |||||||   |||  ||||||||| ||| || |||| ||||||||| ||||||||||||||||||    
T  22207617 ataattcatcaatcatgaacaacatcatataacatcatattcatcaacatatacattcatctaataattcatcaatcat 22207695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 309
Target Start/End: Original strand, 23883278 - 23883318
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||||||||||||| |||| |||||||||||||||||    
T  23883278 ataattcatcaatcatgagcaacgtcatataacatcatatt 23883318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 298
Target Start/End: Complemental strand, 31724182 - 31724142
Alignment:
Q  258 acattcatgtaataattcatcaatcatgaacaacatcatat 298  Q
    |||||||| ||||||||||||||| ||||||||||||||||    
T  31724182 acattcatataataattcatcaataatgaacaacatcatat 31724142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 5079974 - 5080027
Alignment:
Q  14 attataaatttcagagcatcaaaccctctgctttaaatgaatgattatacattcc 68  Q
    |||||| ||||||||||||||| |||||| |||| ||||||||||| ||||||||    
T  5079974 attatacatttcagagcatcaagccctctacttt-aatgaatgattttacattcc 5080027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 298
Target Start/End: Complemental strand, 5083042 - 5082980
Alignment:
Q  236 aacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatat 298  Q
    |||||||| ||| || |||| ||||||||| ||||||||||| || |||||| ||||||||||    
T  5083042 aacatcatattcatcaacatatacattcatataataattcattaaccatgaaaaacatcatat 5082980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 21346171 - 21346117
Alignment:
Q  239 atcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacat 293  Q
    ||||| ||| || |||| ||||||||| |||||| ||||||||||||||||||||    
T  21346171 atcatattcatcaacatatacattcatataataaatcatcaatcatgaacaacat 21346117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 23914204 - 23914258
Alignment:
Q  239 atcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacat 293  Q
    ||||| ||| || |||| ||||||||| |||||| ||||||||||||||||||||    
T  23914204 atcatattcatcaacatatacattcatataataaatcatcaatcatgaacaacat 23914258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 297
Target Start/End: Complemental strand, 19936914 - 19936869
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcata 297  Q
    |||| ||||| ||| || ||||||||||||||||||||||||||||    
T  19936914 acatatacatacatatactaattcatcaatcatgaacaacatcata 19936869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 221
Target Start/End: Original strand, 22473761 - 22473794
Alignment:
Q  188 acgactttgcatcataataacataattcatcaat 221  Q
    ||||||||||||||||||| ||||||||||||||    
T  22473761 acgactttgcatcataatatcataattcatcaat 22473794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 298
Target Start/End: Complemental strand, 36728712 - 36728671
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatat 298  Q
    |||||||||  |||||||||| ||||||||||||||||||||    
T  36728712 tacattcatacaataattcataaatcatgaacaacatcatat 36728671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 4381533 - 4381493
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||||||| |||||||||||||| ||| ||||||||    
T  4381533 ataattcatcaattatgaacaacatcatgtaaaatcatatt 4381493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 280
Target Start/End: Complemental strand, 6573758 - 6573684
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaa 280  Q
    ||||||||||||| |||||||   |||  ||||||||| ||| || |||| ||||||||| ||||||||||||||    
T  6573758 ataattcatcaatcatgaacaatatcatataacatcatattcatcaacatatacattcatataataattcatcaa 6573684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 6573884 - 6573844
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||||||| |||||||||||||  ||||||||||||    
T  6573884 ataattcatcaattatgaacaacatcacgtaacatcatatt 6573844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 17979283 - 17979243
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||||||| || ||||||||||| ||||||||||||    
T  17979283 ataattcatcaattataaacaacatcatgtaacatcatatt 17979243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 18815740 - 18815700
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||||||| | |||||||||||| ||||||||||||    
T  18815740 ataattcatcaattacgaacaacatcatgtaacatcatatt 18815700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 309
Target Start/End: Original strand, 22482991 - 22483031
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||||| ||| | ||||||||||||||||||||||||    
T  22482991 ataattcatcgatcgtaaacaacatcatataacatcatatt 22483031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 36728658 - 36728618
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||| |||| |||||||||||||||||||||| ||||    
T  36728658 ataattcaccaataatgaacaacatcatataacatcttatt 36728618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 36733433 - 36733393
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||||| || |||||||||||||| ||||||||||||    
T  36733433 ataattcatctattatgaacaacatcatgtaacatcatatt 36733393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 3e-42; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 188 - 306
Target Start/End: Complemental strand, 15120134 - 15120013
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    |||| |||||||||||||| ||||||||||||||||||||||   |||||||||||||| ||| || |||||||||||||||||||||||||||||||||    
T  15120134 acgaatttgcatcataatatcataattcatcaattatgaacaacatcacgtaacatcatattcatcaacatgtacattcatgtaataattcatcaatcat 15120035  T
Q  285 gaacaacatcatataacatcat 306  Q
    ||||||||||||||||||||||    
T  15120034 gaacaacatcatataacatcat 15120013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 226 - 309
Target Start/End: Original strand, 37538473 - 37538556
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||  ||||||||| ||| || |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  37538473 aacatcatataacatcatattcatcaacatatacattcatataataattcatcaatcatgaacaacatcatataacatcatatt 37538556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 209 - 308
Target Start/End: Complemental strand, 33556983 - 33556882
Alignment:
Q  209 ataattcatcaattatgaacatcacgta--acatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcat 306  Q
    ||||||||||||| ||||||| ||| ||  ||||||| ||| || |||| ||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  33556983 ataattcatcaatcatgaacaacacatataacatcatattcatcaacatatacattcatataataattcatcaatcatgaacaacatcatataatatcat 33556884  T
Q  307 at 308  Q
    ||    
T  33556883 at 33556882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 226 - 309
Target Start/End: Original strand, 25941702 - 25941785
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||  ||||||||| ||| || |||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  25941702 aacatcatataacatcatgttcatcaacatatacattcatataataattcataaatcatgaacaacatcatataacatcatatt 25941785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 8851934 - 8851864
Alignment:
Q  239 atcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||| ||| || |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  8851934 atcatattcatcaacatatacattcatataataattcatcaatcatgaacaacatcatataacatcatatt 8851864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 209 - 298
Target Start/End: Complemental strand, 15120050 - 15119958
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatat 298  Q
    ||||||||||||| |||||||   |||  ||||||||||||| || |||| ||||||||| ||||||||||||||||||||||||||||||||    
T  15120050 ataattcatcaatcatgaacaacatcatataacatcattttcatcaacatatacattcatataataattcatcaatcatgaacaacatcatat 15119958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 235 - 309
Target Start/End: Original strand, 37538636 - 37538710
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||||  || || |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  37538636 taacatcataatcatcaacatatacattcatataataattcatcaatcatgaacaacatcatataacatcatatt 37538710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 13745617 - 13745544
Alignment:
Q  236 aacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||| ||| || |||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  13745617 aacatcatattcatcaacatatacattcatataataattcatcaatcatgatcaacatcatataacatcatatt 13745544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 305
Target Start/End: Complemental strand, 15576634 - 15576535
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatca 305  Q
    ||||||||||||| |||||||   |||  |||||||||  || || |||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  15576634 ataattcatcaatcatgaacagcatcatataacatcatactcatctacatatacattcatataataattcatcaatcatgaacaacatcatataacatca 15576535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 309
Target Start/End: Original strand, 25941556 - 25941659
Alignment:
Q  209 ataattcatcaattatgaacatcacg---taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatca 305  Q
    ||||||||||||| ||||||| |||    ||||||||| ||| || |||| ||||||||| ||||||||||| |||||||||||||| ||||||||||||    
T  25941556 ataattcatcaatcatgaacaacaccatataacatcatattcatcaacatatacattcatataataattcataaatcatgaacaacaccatataacatca 25941655  T
Q  306 tatt 309  Q
    ||||    
T  25941656 tatt 25941659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 309
Target Start/End: Original strand, 38294616 - 38294719
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatca 305  Q
    ||||||||||||| |||||||   |||  ||||||||| ||| || || | ||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  38294616 ataattcatcaatcatgaacaacatcatataacatcatattcatcaacgtatacattcatataataattcatcaatcatggacaacatcatataacatca 38294715  T
Q  306 tatt 309  Q
    ||||    
T  38294716 tatt 38294719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 235 - 306
Target Start/End: Original strand, 25941648 - 25941719
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcat 306  Q
    ||||||||| ||| || |||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  25941648 taacatcatattcatcaacatatacattcatataataattcataaatcatgaacaacatcatataacatcat 25941719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 238 - 309
Target Start/End: Complemental strand, 36301595 - 36301524
Alignment:
Q  238 catcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||| ||| || |||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  36301595 catcatattcatcaacatatacattcatataataattcatcaatcatgaacaacatcttataacatcatatt 36301524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 43747667 - 43747761
Alignment:
Q  208 cataattcatcaattatgaacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    ||||||||||||||||||||||       ||||||| ||| || |||| ||| ||||| ||||| |||||||||||||||||||||||||||||||||||    
T  43747667 cataattcatcaattatgaaca-------acatcatattcatcaacatatactttcatataatacttcatcaatcatgaacaacatcatataacatcata 43747759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 309
Target Start/End: Original strand, 43747741 - 43747824
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||  ||||||||| ||| || |||| ||||||||| |||||||||||||||||||||||||||||||||| ||| ||||    
T  43747741 aacatcatataacatcatattcatcaacatatacattcatataataattcatcaatcatgaacaacatcatataaaatcttatt 43747824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 252 - 307
Target Start/End: Complemental strand, 48213690 - 48213635
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  48213690 acatatacattcatataataattcatcaatcatgaacaacatcatataacatcata 48213635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 235 - 309
Target Start/End: Original strand, 8470937 - 8471011
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||| ||| || |||| ||||||||| ||||||||| |||||||||||||||||| ||||||||||||||    
T  8470937 taacatcatattcatcaacatatacattcatataataattcgtcaatcatgaacaacatcgtataacatcatatt 8471011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 9743840 - 9743770
Alignment:
Q  239 atcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||| ||| || |||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  9743840 atcatattcatcaacatatacattcatataataattcatcaatcatgaacatcatcatataacatcatatt 9743770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 188 - 309
Target Start/End: Complemental strand, 9743957 - 9743833
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    |||||||  |||||| ||| ||||||||||||||||| ||||   ||| |||||||||| ||  || |||| ||| ||||| ||||| ||||||||||||    
T  9743957 acgacttcacatcatgatatcataattcatcaattataaacaacatcatgtaacatcatatttatcaacatataccttcatataatacttcatcaatcat 9743858  T
Q  285 gaacaacatcatataacatcatatt 309  Q
    ||||||||||||| || ||||||||    
T  9743857 gaacaacatcatacaatatcatatt 9743833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 210 - 307
Target Start/End: Complemental strand, 20253144 - 20253044
Alignment:
Q  210 taattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcat 306  Q
    |||||||| |||||||||||   |||  ||| ||||| ||| || |||| |||||| || ||||||||||||||||||||||||||||||||||||||||    
T  20253144 taattcattaattatgaacaacatcatataatatcatgttcatcaacatatacattaatataataattcatcaatcatgaacaacatcatataacatcat 20253045  T
Q  307 a 307  Q
    |    
T  20253044 a 20253044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 239 - 309
Target Start/End: Original strand, 20619563 - 20619633
Alignment:
Q  239 atcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||| ||| || |||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  20619563 atcatattcatcaacatatacattcatataataattcatcaatcataaacaacatcatataacatcatatt 20619633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 239 - 309
Target Start/End: Original strand, 25941526 - 25941596
Alignment:
Q  239 atcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||| ||| || |||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  25941526 atcatattcatcaacatatacattcatataataattcatcaatcatgaacaacaccatataacatcatatt 25941596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 310
Target Start/End: Original strand, 8470737 - 8470841
Alignment:
Q  209 ataattcatcaattatgaacatca-cgta--acatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatca 305  Q
    ||||||||||||| ||||||| || ||||  ||||||| ||| || |||  ||||||||| ||||||||| |||||||||||||||||| ||||||||||    
T  8470737 ataattcatcaatcatgaacaacatcgtataacatcatattcatcaacacatacattcatataataattcttcaatcatgaacaacatcctataacatca 8470836  T
Q  306 tatta 310  Q
    |||||    
T  8470837 tatta 8470841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 257 - 310
Target Start/End: Original strand, 8472759 - 8472812
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatta 310  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  8472759 tacattcatataataattcatcaatcatgaacaacatcgtataacatcatatta 8472812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 309
Target Start/End: Complemental strand, 9743810 - 9743707
Alignment:
Q  209 ataattcatcaattatgaacatcacg---taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatca 305  Q
    ||||||||||||| ||||||||||     ||||||||| ||| || |||| || |||||| ||||||||||||||||||||||||||| ||||||||||     
T  9743810 ataattcatcaatcatgaacatcatcatataacatcatattcatcaacatatatattcatataataattcatcaatcatgaacaacattatataacatcg 9743711  T
Q  306 tatt 309  Q
    ||||    
T  9743710 tatt 9743707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 309
Target Start/End: Complemental strand, 13745584 - 13745481
Alignment:
Q  209 ataattcatcaattatga---acatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatca 305  Q
    ||||||||||||| ||||   ||||||  ||||||||| ||| |  |||| ||||||||| |||||||||||||||||||| |||||||||||||| |||    
T  13745584 ataattcatcaatcatgatcaacatcatataacatcatattcattaacatatacattcatataataattcatcaatcatgatcaacatcatataacctca 13745485  T
Q  306 tatt 309  Q
    ||||    
T  13745484 tatt 13745481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 15576677 - 15576596
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    |||||||  |||||||||  || || |||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  15576677 aacatcatataacatcatactcatcaacatatacattcatataataattcatcaatcatgaacagcatcatataacatcata 15576596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 15576740 - 15576659
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    |||||||  ||||||||| ||| || |||| ||||||||| ||||||||||| |||||||| ||||||||||||||||||||    
T  15576740 aacatcatataacatcatattcatcaacatatacattcatataataattcataaatcatgatcaacatcatataacatcata 15576659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 38294599 - 38294656
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  38294599 acatatacattcatagaataattcatcaatcatgaacaacatcatataacatcatatt 38294656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 15576772 - 15576720
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  15576772 tacattcatataataattcataaatcatgaacaacatcatataacatcatatt 15576720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 309
Target Start/End: Original strand, 8473038 - 8473111
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||| ||| || |||| ||||||||| |||||||||||||||||||||||||||  ||||||||||||||    
T  8473038 taacatcatattcatcaacatatacattcatataataattcatcaatcatgaacaacat-gtataacatcatatt 8473111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 298
Target Start/End: Original strand, 38294679 - 38294771
Alignment:
Q  209 ataattcatcaattatg---aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatat 298  Q
    ||||||||||||| |||   |||||||  ||||||||| ||| || |||| ||| ||||| ||||||||||||||||||||||||||||||||    
T  38294679 ataattcatcaatcatggacaacatcatataacatcatattcatcaacatatactttcatataataattcatcaatcatgaacaacatcatat 38294771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 20253290 - 20253217
Alignment:
Q  236 aacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||| ||| || |||| ||||||||| ||||||||| |||| ||| ||||||||||||||||||||||||    
T  20253290 aacatcatattcatcaacatctacattcatataataattcgtcaagcattaacaacatcatataacatcatatt 20253217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 33557000 - 33556944
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  33557000 acatatacattcatataataattcatcaatcatgaacaaca-catataacatcatatt 33556944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 261 - 309
Target Start/End: Original strand, 8470729 - 8470777
Alignment:
Q  261 ttcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  8470729 ttcatataataattcatcaatcatgaacaacatcgtataacatcatatt 8470777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 302
Target Start/End: Original strand, 8473072 - 8473167
Alignment:
Q  209 ataattcatcaattatgaacatcacgta--acatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataaca 302  Q
    ||||||||||||| ||||||| || |||  ||||||| ||| || |||  ||||||||| |||||||| ||||||||||||||| |||||||||||    
T  8473072 ataattcatcaatcatgaacaacatgtataacatcatattcatcaacagttacattcatataataattgatcaatcatgaacaaaatcatataaca 8473167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 269 - 309
Target Start/End: Original strand, 30237042 - 30237082
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  30237042 ataattcatcaatcatgaacaacatcatataacatcatatt 30237082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 307
Target Start/End: Complemental strand, 14981546 - 14981491
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    |||| ||||||||| |||||||||||||| ||||||||||||| ||||||||||||    
T  14981546 acatttacattcatataataattcatcaaccatgaacaacatcgtataacatcata 14981491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 307
Target Start/End: Complemental strand, 15411022 - 15410967
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    |||| ||||||||| |||||||||||||| ||||||||||||| ||||||||||||    
T  15411022 acatttacattcatataataattcatcaaccatgaacaacatcgtataacatcata 15410967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 298
Target Start/End: Complemental strand, 36301535 - 36301472
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatat 298  Q
    ||||||||| ||| || |||| ||||||||| |||||| |||||||||||||||||||||||||    
T  36301535 taacatcatattcatcaacatatacattcatataataaatcatcaatcatgaacaacatcatat 36301472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 309
Target Start/End: Original strand, 8471262 - 8471336
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||| ||| || |||  ||||||||| |||||||| ||||||||||||||| ||||||||||| ||||||    
T  8471262 taacatcatattcatcaacagatacattcatataataattgatcaatcatgaacaaaatcatataacaccatatt 8471336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 14929141 - 14929099
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatata 299  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  14929141 tacattcatataataattcatcaatcatgaacaacatcatata 14929099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 15352607 - 15352565
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatata 299  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  15352607 tacattcatataataattcatcaatcatgaacaacatcatata 15352565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 4691653 - 4691596
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||| ||| ||||| ||||| |||||||| ||||||||||||||||||||||||||||    
T  4691653 acatataccttcatataatacttcatcaaacatgaacaacatcatataacatcatatt 4691596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 310
Target Start/End: Original strand, 8471113 - 8471166
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatta 310  Q
    ||||||||| ||||||||| |||||||||||||||||  |||||||||||||||    
T  8471113 tacattcatataataattcttcaatcatgaacaacattgtataacatcatatta 8471166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 13134004 - 13133951
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataa-catcatatt 309  Q
    ||||||||| ||||||||||||||| |||||||||||||||||| |||||||||    
T  13134004 tacattcatataataattcatcaataatgaacaacatcatataatcatcatatt 13133951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 235 - 307
Target Start/End: Complemental strand, 14153671 - 14153599
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    ||||||||| ||  || |||| ||||||||| |||||||||||||||||||||||  ||||||||| ||||||    
T  14153671 taacatcatatttatcaacatatacattcatataataattcatcaatcatgaacagtatcatataaaatcata 14153599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 293
Target Start/End: Complemental strand, 8514442 - 8514384
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacat 293  Q
    ||||||||| | | || |||| ||||||||| |||||||||||||||||||||||||||    
T  8514442 taacatcatatacatcaacatatacattcatataataattcatcaatcatgaacaacat 8514384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 47976320 - 47976263
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||| ||||||||| ||||||||||| ||| ||||||| |||||| ||||||||||||    
T  47976320 acatatacattcatataataattcataaattatgaacagcatcatgtaacatcatatt 47976263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 264 - 297
Target Start/End: Complemental strand, 48213741 - 48213708
Alignment:
Q  264 atgtaataattcatcaatcatgaacaacatcata 297  Q
    ||||||||||||||||||||||||||||||||||    
T  48213741 atgtaataattcatcaatcatgaacaacatcata 48213708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 20253385 - 20253333
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||| || |||||||| ||| ||||||||||||| |||||||||||||    
T  20253385 tacattcatatagtaattcattaattatgaacaacatcacataacatcatatt 20253333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 298
Target Start/End: Original strand, 8472930 - 8472993
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatat 298  Q
    ||||||||| ||| || |||| ||||||  | ||||||||||||||||||||| ||||||||||    
T  8472930 taacatcatattcatcaacatatacatttgtataataattcatcaatcatgaataacatcatat 8472993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 298
Target Start/End: Complemental strand, 13745646 - 13745608
Alignment:
Q  260 attcatgtaataattcatcaatcatgaacaacatcatat 298  Q
    |||||| ||||||||||| ||||||||||||||||||||    
T  13745646 attcatataataattcattaatcatgaacaacatcatat 13745608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 14258632 - 14258686
Alignment:
Q  239 atcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacat 293  Q
    ||||| ||| || |||| ||||||||| |||||| ||||||||||||||||||||    
T  14258632 atcatattcatcaacatatacattcatataataaatcatcaatcatgaacaacat 14258686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 16460704 - 16460650
Alignment:
Q  239 atcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacat 293  Q
    ||||| ||| || |||| ||||||||| |||||| ||||||||||||||||||||    
T  16460704 atcatattcatcaacatatacattcatataataaatcatcaatcatgaacaacat 16460650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 16579940 - 16579994
Alignment:
Q  239 atcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacat 293  Q
    ||||| ||| || |||| ||||||||| |||||| ||||||||||||||||||||    
T  16579940 atcatattcatcaacatatacattcatataataaatcatcaatcatgaacaacat 16579994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 16585723 - 16585669
Alignment:
Q  239 atcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacat 293  Q
    ||||| ||| || |||| ||||||||| |||||| ||||||||||||||||||||    
T  16585723 atcatattcatcaacatatacattcatataataaatcatcaatcatgaacaacat 16585669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 306
Target Start/End: Complemental strand, 20253162 - 20253108
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcat 306  Q
    |||| ||||||||| || |||||||| ||| |||||||||||||||||| |||||    
T  20253162 acatatacattcatatagtaattcattaattatgaacaacatcatataatatcat 20253108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 20487723 - 20487777
Alignment:
Q  239 atcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacat 293  Q
    ||||| ||| || |||| ||||||||| |||||| ||||||||||||||||||||    
T  20487723 atcatattcatcaacatatacattcatataataaatcatcaatcatgaacaacat 20487777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 47093822 - 47093872
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    |||||||||  |||||||||||||| || ||||||||||||||||| ||||    
T  47093822 tacattcatacaataattcatcaatgataaacaacatcatataacaacata 47093872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 221
Target Start/End: Complemental strand, 48213786 - 48213752
Alignment:
Q  187 gacgactttgcatcataataacataattcatcaat 221  Q
    |||||||||||||||||||| ||||||||||||||    
T  48213786 gacgactttgcatcataatatcataattcatcaat 48213752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 283
Target Start/End: Complemental strand, 4691616 - 4691559
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatca 283  Q
    |||||||  ||||||||| ||| || |||| ||||||||| |||||||||||||||||    
T  4691616 aacatcatataacatcatattcatcaacatatacattcatataataattcatcaatca 4691559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 13133953 - 13133916
Alignment:
Q  272 attcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  13133953 attcatcaatcataaacaacatcatataacaccatatt 13133916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 221
Target Start/End: Complemental strand, 15576872 - 15576839
Alignment:
Q  188 acgactttgcatcataataacataattcatcaat 221  Q
    ||||||||||||||||||| ||||||||||||||    
T  15576872 acgactttgcatcataatatcataattcatcaat 15576839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 298
Target Start/End: Complemental strand, 20253372 - 20253281
Alignment:
Q  210 taattcatcaattatg---aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatat 298  Q
    |||||||| |||||||   |||||||| ||||||||| ||  || |||| ||||||||| ||| ||||||| ||| ||||| ||||||||||    
T  20253372 taattcattaattatgaacaacatcacataacatcatatttatcaacatatacattcatataacaattcattaattatgaagaacatcatat 20253281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 298
Target Start/End: Original strand, 38294563 - 38294592
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatat 298  Q
    ||||||||||||||||||||||||||||||    
T  38294563 ataattcatcaatcatgaacaacatcatat 38294592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 11314209 - 11314153
Alignment:
Q  14 attataaatttcagagcatcaaaccctctgctttaa-atgaatgattatacattcca 69  Q
    |||||| ||| |||| |||||| |||||| |||||| ||||||||||||||||||||    
T  11314209 attatacattccagaacatcaagccctctactttaatatgaatgattatacattcca 11314153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 13746067 - 13746011
Alignment:
Q  14 attataaatttcagagcatcaaaccctctgctttaa-atgaatgattatacattcca 69  Q
    |||||| ||| ||||||||||| |||||  |||||| ||||||||||||||||||||    
T  13746067 attatatattccagagcatcaagccctcaactttaatatgaatgattatacattcca 13746011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 13746155 - 13746099
Alignment:
Q  14 attataaatttcagagcatcaaaccctctgctttaa-atgaatgattatacattcca 69  Q
    |||||| ||| ||||||||||| |||||  |||||| ||||||||||||||||||||    
T  13746155 attatatattccagagcatcaatccctcaactttaatatgaatgattatacattcca 13746099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 15120113 - 15120073
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||||||| |||||||||||||  ||||||||||||    
T  15120113 ataattcatcaattatgaacaacatcacgtaacatcatatt 15120073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 15576835 - 15576783
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||| || |||||||   || |||||||||||||||||||||||||||    
T  15576835 tacattcatatagtaattcaattattatgaacaacatcatataacatcatatt 15576783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 2e-40; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 190 - 309
Target Start/End: Original strand, 26761669 - 26761791
Alignment:
Q  190 gactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatga 286  Q
    |||||||||||||||||  ||||||||| |||||||||||   |||||||||||||| ||| || |||||||||||||||||||||||||||||||||||    
T  26761669 gactttgcatcataatatgataattcattaattatgaacaacatcacgtaacatcatattcatcaacatgtacattcatgtaataattcatcaatcatga 26761768  T
Q  287 acaacatcatataacatcatatt 309  Q
    |||||||||||||||||||||||    
T  26761769 acaacatcatataacatcatatt 26761791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 188 - 302
Target Start/End: Complemental strand, 8834047 - 8833930
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    ||||||||||| ||||||| ||||||||||||||||||||||   ||| |||||||||| ||| || |||||||||||| |||||||||| |||||||||    
T  8834047 acgactttgcagcataatatcataattcatcaattatgaacaacatcatgtaacatcatattcatcaacatgtacattcttgtaataatttatcaatcat 8833948  T
Q  285 gaacaacatcatataaca 302  Q
    ||||||||||||||||||    
T  8833947 gaacaacatcatataaca 8833930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 188 - 307
Target Start/End: Complemental strand, 14026758 - 14026636
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    ||||||| || |||||||| ||||||||||||||||||||||   ||| |||||||||| ||| || |||| ||||||||| || |||||||||||||||    
T  14026758 acgacttcgcttcataatatcataattcatcaattatgaacaacatcatgtaacatcatattcatcaacatatacattcatatattaattcatcaatcat 14026659  T
Q  285 gaacaacatcatataacatcata 307  Q
    |||||||||||||||||||||||    
T  14026658 gaacaacatcatataacatcata 14026636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 187 - 309
Target Start/End: Original strand, 16062617 - 16062742
Alignment:
Q  187 gacgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatca 283  Q
    ||||||||||||||||||||  ||||||||||||| |||||||   |||  |||||| || ||| || |||| ||||||||| |||||||||||||||||    
T  16062617 gacgactttgcatcataatattataattcatcaatcatgaacaacatcatataacattatattcatcaacatatacattcatataataattcatcaatca 16062716  T
Q  284 tgaacaacatcatataacatcatatt 309  Q
    ||||||||| ||||||||||||||||    
T  16062717 tgaacaacaccatataacatcatatt 16062742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 225 - 309
Target Start/End: Original strand, 26749330 - 26749414
Alignment:
Q  225 gaacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||| |||||||||| ||| || |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  26749330 gaacatcatgtaacatcatattcatcaacatatacattcatataataattcatcaatcatgaacaacatcatataacatcatatt 26749414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 188 - 309
Target Start/End: Original strand, 660158 - 660282
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    ||||||||||||||||||| ||||||||||||||||| ||||   ||| |||||||||| ||  || |||| ||| ||||| ||||| ||||||||||||    
T  660158 acgactttgcatcataataccataattcatcaattataaacaacatcatgtaacatcatatttatcaacatataccttcatataatacttcatcaatcat 660257  T
Q  285 gaacaacatcatataacatcatatt 309  Q
    |||||||| |||| |||||||||||    
T  660258 gaacaacaacatacaacatcatatt 660282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 226 - 309
Target Start/End: Complemental strand, 8833943 - 8833860
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||  ||||| ||||||| || |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  8833943 aacatcatataacaccattttcatcaacatatacattcatataataattcatcaatcatgaacaacatcatataacatcatatt 8833860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 235 - 309
Target Start/End: Original strand, 16062829 - 16062903
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||| ||| || |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  16062829 taacatcatattcatcaacatatacattcatataataattcatcaatcatgaacaacatcatataacatcatatt 16062903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 209 - 309
Target Start/End: Complemental strand, 21399811 - 21399708
Alignment:
Q  209 ataattcatcaattatga---acatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatca 305  Q
    ||||||||||||| ||||   ||||||  ||||||||| ||| |  |||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  21399811 ataattcatcaatcatgagcaacatcatataacatcatattcattaacatatacattcatataataattcatcaatcatgaacaacatcatataacatca 21399712  T
Q  306 tatt 309  Q
    ||||    
T  21399711 tatt 21399708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 188 - 298
Target Start/End: Complemental strand, 1628321 - 1628208
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    ||||||| |||| |||||| ||||||||||||||||||||||   ||| |||||||||| ||| || |||| ||| ||||| ||||| ||||||||||||    
T  1628321 acgacttcgcattataatatcataattcatcaattatgaacaacatcatgtaacatcatattcatcaacatatactttcatataatacttcatcaatcat 1628222  T
Q  285 gaacaacatcatat 298  Q
     |||||||||||||    
T  1628221 taacaacatcatat 1628208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 188 - 309
Target Start/End: Complemental strand, 20198596 - 20198482
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattatgaacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaa 287  Q
    ||||||| ||||||||||| ||||||||||||||||||||||       ||||||| ||| |  |||| ||| ||||| ||||| ||||||||||||| |    
T  20198596 acgacttcgcatcataatatcataattcatcaattatgaaca-------acatcatattcattaacatataccttcatataatacttcatcaatcatgga 20198504  T
Q  288 caacatcatataacatcatatt 309  Q
    ||||||||||||||||||||||    
T  20198503 caacatcatataacatcatatt 20198482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 188 - 289
Target Start/End: Original strand, 18743774 - 18743878
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    |||||||  |||||||||| ||||||| ||||||||||||||   ||| |||||||||| ||| || |||| ||||||||| ||||||||||||||||||    
T  18743774 acgacttcacatcataatatcataatttatcaattatgaacaacatcatgtaacatcatattcatcaacatatacattcatataataattcatcaatcat 18743873  T
Q  285 gaaca 289  Q
    |||||    
T  18743874 gaaca 18743878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 235 - 309
Target Start/End: Complemental strand, 21399845 - 21399771
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||| ||| || |||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  21399845 taacatcatattcatcaacatatacattcatataataattcatcaatcatgagcaacatcatataacatcatatt 21399771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 21503270 - 21503374
Alignment:
Q  208 cataattcatcaattatga---acatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatc 304  Q
    |||||||||||||| ||||   ||||||  ||||||||| ||| || |||| ||||||||| |||||||||||||||||| ||||||||||||||| |||    
T  21503270 cataattcatcaatcatgagcaacatcatataacatcatattcatcaacatatacattcatataataattcatcaatcataaacaacatcatataatatc 21503369  T
Q  305 atatt 309  Q
    |||||    
T  21503370 atatt 21503374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 309
Target Start/End: Original strand, 26749374 - 26749477
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatca 305  Q
    ||||||||||||| |||||||   |||  ||||||||| ||| || |||| ||||||||| |||||||||||||||||||||||||||||||  ||||||    
T  26749374 ataattcatcaatcatgaacaacatcatataacatcatattcatcaacatatacattcatataataattcatcaatcatgaacaacatcataggacatca 26749473  T
Q  306 tatt 309  Q
    ||||    
T  26749474 tatt 26749477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 309
Target Start/End: Complemental strand, 20198376 - 20198293
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||  |||||||||  || || |||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  20198376 aacatcatataacatcatactcatcaacatatacattcatataataattcatcaatcatgaacaacatcatataacctcatatt 20198293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 235 - 309
Target Start/End: Original strand, 16062766 - 16062840
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||| ||| || |||| ||||||||| |||||||| ||||||||||||||||| ||||||||||||||||    
T  16062766 taacatcatattcatcaacatatacattcatataataatttatcaatcatgaacaacaccatataacatcatatt 16062840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 26749488 - 26749538
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26749488 tacattcatataataattcatcaatcatgaacaacatcatataacatcata 26749538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 252 - 307
Target Start/End: Complemental strand, 20198413 - 20198358
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    |||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  20198413 acatatacattcatataatacttcatcaatcatgaacaacatcatataacatcata 20198358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 309
Target Start/End: Complemental strand, 20198502 - 20198419
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||  ||||||||| ||| || |||| ||||||||| |||||||| ||||||||||||||||||||||  ||||||||||    
T  20198502 aacatcatataacatcatattcatcaacatatacattcatataataatttatcaatcatgaacaacatcataggacatcatatt 20198419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 257 - 308
Target Start/End: Original strand, 30613362 - 30613413
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcatat 308  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  30613362 tacattcatataataattcattaatcatgaacaacatcatataacatcatat 30613413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 309
Target Start/End: Complemental strand, 23200203 - 23200129
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||| ||| || |||| ||||||||| ||||||||||||||| |||||||| |||||||||| |||||||    
T  23200203 taacatcatattcatcaacatatacattcatataataattcatcaataatgaacaatatcatataacctcatatt 23200129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 26749247 - 26749351
Alignment:
Q  208 cataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatc 304  Q
    ||||||||||||||||||||||   ||| |||||||||| ||| || | || ||||||||| ||| |||||||| ||||| || |||||||| |||||||    
T  26749247 cataattcatcaattatgaacaacatcatgtaacatcatattcatcaatatatacattcatataagaattcatcgatcataaagaacatcatgtaacatc 26749346  T
Q  305 atatt 309  Q
    |||||    
T  26749347 atatt 26749351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 1628217 - 1628144
Alignment:
Q  236 aacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||| ||| || |||| ||||||||| ||||| |||||||||||| ||||||||||||| ||||||||||    
T  1628217 aacatcatattcatcaacatatacattcatataatagttcatcaatcattaacaacatcatatgacatcatatt 1628144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 18743891 - 18743948
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||| ||||||||| ||||| |||||||||||||||||||||||||||||| ||||||    
T  18743891 acatatacattcatataatacttcatcaatcatgaacaacatcatataacagcatatt 18743948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 21399926 - 21399869
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||| ||||||||| |||||||||||||||| |||| |||||||||||||||||||||    
T  21399926 acatatacattcatataataattcatcaatcctgaataacatcatataacatcatatt 21399869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 260 - 309
Target Start/End: Complemental strand, 21401790 - 21401741
Alignment:
Q  260 attcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  21401790 attcatataataatccatcaatcatgaacaacatcatataacatcatatt 21401741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 297
Target Start/End: Complemental strand, 14026673 - 14026583
Alignment:
Q  210 taattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcata 297  Q
    |||||||||||| |||||||   |||  |||||||||  || || |||| ||||||||| |||||||||||||||||||||||||||||||    
T  14026673 taattcatcaatcatgaacaacatcatataacatcatactcatcaacatatacattcatataataattcatcaatcatgaacaacatcata 14026583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 21400005 - 21399933
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatat 298  Q
    |||||||  ||||||||| ||| || |||| ||||||||| |||||||||||||| |||||||||||||||||    
T  21400005 aacatcatataacatcatattcatcaacatatacattcatataataattcatcaaccatgaacaacatcatat 21399933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 252 - 308
Target Start/End: Original strand, 30611370 - 30611426
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatat 308  Q
    |||| ||||||||| |||||||||||||||||||| |||||||||||||| ||||||    
T  30611370 acatatacattcatataataattcatcaatcatgagcaacatcatataacctcatat 30611426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 307
Target Start/End: Complemental strand, 1628138 - 1628083
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    |||| ||||||||| ||||| |||||||||||||| ||||||||||||||||||||    
T  1628138 acatatacattcatataatacttcatcaatcatgagcaacatcatataacatcata 1628083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 307
Target Start/End: Complemental strand, 14026565 - 14026510
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    |||| ||||||||| ||||| |||||||||||||||||||||||||||||| ||||    
T  14026565 acatatacattcatataatacttcatcaatcatgaacaacatcatataacaacata 14026510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 305
Target Start/End: Complemental strand, 8504598 - 8504498
Alignment:
Q  208 cataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatc 304  Q
    ||||||||||||||||| ||||   ||| |||||||||| ||| ||   || ||||||||| |||||||||||||||| |||| |||||||| |||||||    
T  8504598 cataattcatcaattataaacaacatcatgtaacatcatattcatcagtatatacattcatataataattcatcaatcgtgaataacatcatgtaacatc 8504499  T
Q  305 a 305  Q
    |    
T  8504498 a 8504498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 309
Target Start/End: Original strand, 30613468 - 30613517
Alignment:
Q  260 attcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||| ||||||||||||| ||||||||||||||||||||| |||||||    
T  30613468 attcatataataattcatcagtcatgaacaacatcatataacgtcatatt 30613517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 30613668 - 30613725
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||| |||| |||| |||||||||||||||||| |||||||||||||||| |||||||    
T  30613668 acatatacactcatataataattcatcaatcattaacaacatcatataacctcatatt 30613725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 299
Target Start/End: Original strand, 30611481 - 30611520
Alignment:
Q  260 attcatgtaataattcatcaatcatgaacaacatcatata 299  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  30611481 attcatataataattcatcaatcatgaacaacatcatata 30611520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 298
Target Start/End: Original strand, 18743954 - 18744000
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatat 298  Q
    |||| ||||||||| ||||| ||||||||||||||||||||||||||    
T  18743954 acatatacattcatataatacttcatcaatcatgaacaacatcatat 18744000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 309
Target Start/End: Complemental strand, 21400019 - 21399985
Alignment:
Q  275 catcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||||||||||||||||||||||||||||||    
T  21400019 catcaatcatgaacaacatcatataacatcatatt 21399985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 272 - 309
Target Start/End: Original strand, 16062740 - 16062777
Alignment:
Q  272 attcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  16062740 attcatcaatcatgaacaacaccatataacatcatatt 16062777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 272 - 309
Target Start/End: Original strand, 20312471 - 20312508
Alignment:
Q  272 attcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  20312471 attcatcaatcatgaacaacaacatataacatcatatt 20312508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 1628300 - 1628260
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||||||| |||||||||||||| ||||||||||||    
T  1628300 ataattcatcaattatgaacaacatcatgtaacatcatatt 1628260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 284
Target Start/End: Complemental strand, 8833900 - 8833822
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    ||||||||||||| |||||||   |||  ||||||||| ||| || |||| ||||||||| ||||||||||||||||||    
T  8833900 ataattcatcaatcatgaacaacatcatataacatcatattcatcaacatatacattcatataataattcatcaatcat 8833822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 8834026 - 8833986
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||||||| |||||||||||||| ||||||||||||    
T  8834026 ataattcatcaattatgaacaacatcatgtaacatcatatt 8833986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 14026737 - 14026697
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||||||| |||||||||||||| ||||||||||||    
T  14026737 ataattcatcaattatgaacaacatcatgtaacatcatatt 14026697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 16062434 - 16062490
Alignment:
Q  14 attataaatttcagagcatcaaaccctctgctttaa-atgaatgattatacattcca 69  Q
    |||||| ||| ||||||||||| |||||| |||||| ||||||||||||||||||||    
T  16062434 attatacattccagagcatcaagccctctactttaatatgaatgattatacattcca 16062490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 223
Target Start/End: Complemental strand, 16605303 - 16605267
Alignment:
Q  187 gacgactttgcatcataataacataattcatcaatta 223  Q
    |||||||||||||||||||| ||||||||||||||||    
T  16605303 gacgactttgcatcataatatcataattcatcaatta 16605267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 21401996 - 21401940
Alignment:
Q  14 attataaatttcagagcatcaaaccctctgctttaa-atgaatgattatacattcca 69  Q
    |||||| ||| ||||||||||| |||||| |||||| ||||||||||||||||||||    
T  21401996 attatacattccagagcatcaagccctctactttaatatgaatgattatacattcca 21401940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 26761751 - 26761829
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    ||||||||||||| |||||||   |||  ||||||||| ||| || |||| ||||||||| ||||||||||||||||||    
T  26761751 ataattcatcaatcatgaacaacatcatataacatcatattcatcaacatatacattcatataataattcatcaatcat 26761829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 299
Target Start/End: Original strand, 30611536 - 30611583
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatata 299  Q
    |||| |||| |||| ||||||||||| |||||||||||||||||||||    
T  30611536 acatatacactcatataataattcattaatcatgaacaacatcatata 30611583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 299
Target Start/End: Original strand, 30611741 - 30611788
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatata 299  Q
    |||| |||| |||| ||||||||||| |||||||||||||||||||||    
T  30611741 acatatacactcatataataattcattaatcatgaacaacatcatata 30611788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 299
Target Start/End: Original strand, 30613613 - 30613652
Alignment:
Q  260 attcatgtaataattcatcaatcatgaacaacatcatata 299  Q
    |||||| ||||||||||||||||||||| |||||||||||    
T  30613613 attcatataataattcatcaatcatgaaaaacatcatata 30613652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 30611582 - 30611624
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatata 299  Q
    ||||||||| ||||||||||||||| | |||||||||||||||    
T  30611582 tacattcatataataattcatcaattacgaacaacatcatata 30611624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 30613569 - 30613611
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatata 299  Q
    ||||||||| ||||||||||||||| | |||||||||||||||    
T  30613569 tacattcatataataattcatcaattacgaacaacatcatata 30613611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 297
Target Start/End: Complemental strand, 20917810 - 20917765
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcata 297  Q
    |||| ||||||||| || ||||||||||||||| ||||||||||||    
T  20917810 acatatacattcatatactaattcatcaatcataaacaacatcata 20917765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 221
Target Start/End: Original strand, 22110953 - 22110986
Alignment:
Q  188 acgactttgcatcataataacataattcatcaat 221  Q
    ||||||||||||||||||| ||||||||||||||    
T  22110953 acgactttgcatcataatatcataattcatcaat 22110986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 299
Target Start/End: Original strand, 30613497 - 30613570
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatata 299  Q
    |||||||  |||| |||| ||| || |||| |||| |||  ||||||||||| |||||||||||||||||||||    
T  30613497 aacatcatataacgtcatattcatcaacatatacactcaaataataattcattaatcatgaacaacatcatata 30613570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 299
Target Start/End: Original strand, 30613705 - 30613778
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatata 299  Q
    |||||||  |||| |||| ||| || |||| |||| |||| ||||||||||| ||||||||||||||| |||||    
T  30613705 aacatcatataacctcatattcatcaacatatacactcatataataattcattaatcatgaacaacatgatata 30613778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 8504597 - 8504557
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||||||| || ||||||||||| ||||||||||||    
T  8504597 ataattcatcaattataaacaacatcatgtaacatcatatt 8504557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 309
Target Start/End: Original strand, 18743795 - 18743835
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||| |||||| |||||||||||||| ||||||||||||    
T  18743795 ataatttatcaattatgaacaacatcatgtaacatcatatt 18743835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 224
Target Start/End: Original strand, 19076444 - 19076480
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattat 224  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  19076444 acgactttgcatcataatatcataattcattaattat 19076480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 6e-40; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 188 - 306
Target Start/End: Original strand, 25085645 - 25085766
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    |||| |||||||||||||| ||||||||||||||||||||||   |||||||||||||| ||| |  |||||||||||||||||||||||||||||||||    
T  25085645 acgaatttgcatcataatatcataattcatcaattatgaacaacatcacgtaacatcatattcattaacatgtacattcatgtaataattcatcaatcat 25085744  T
Q  285 gaacaacatcatataacatcat 306  Q
    ||||||||||||||||||||||    
T  25085745 gaacaacatcatataacatcat 25085766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 226 - 309
Target Start/End: Complemental strand, 21316494 - 21316411
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||  ||||||||| ||| || |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  21316494 aacatcatataacatcatattcatcaacatatacattcatataataattcatcaatcatgaacaacatcatataacatcatatt 21316411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 226 - 309
Target Start/End: Complemental strand, 21336387 - 21336304
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||  ||||||||| ||| || |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  21336387 aacatcatataacatcatattcatcaacatatacattcatataataattcatcaatcatgaacaacatcatataacatcatatt 21336304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 209 - 309
Target Start/End: Complemental strand, 25587494 - 25587391
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatca 305  Q
    ||||||||||||| |||||||   |||  ||||||||| ||| || |||| ||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  25587494 ataattcatcaatcatgaacaacatcatataacatcatattcatcaacatatacattcatataataattcatcaatcatgagcaacatcatataacatca 25587395  T
Q  306 tatt 309  Q
    ||||    
T  25587394 tatt 25587391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 226 - 309
Target Start/End: Complemental strand, 25587537 - 25587454
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||  ||||||||| ||| || |||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  25587537 aacatcatataacatcatattcatcaacacatacattcatataataattcatcaatcatgaacaacatcatataacatcatatt 25587454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 235 - 309
Target Start/End: Original strand, 21368274 - 21368348
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||| ||| || |||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  21368274 taacatcatattcatcaacatatacattcatataataattcatcaattatgaacaacatcatataacatcatatt 21368348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 209 - 298
Target Start/End: Original strand, 21368308 - 21368400
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatat 298  Q
    |||||||||||||||||||||   |||  ||||||||| ||| || |||| ||||||||| ||||||||||||||||||||||||||||||||    
T  21368308 ataattcatcaattatgaacaacatcatataacatcatattcatcaacatatacattcatataataattcatcaatcatgaacaacatcatat 21368400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 235 - 309
Target Start/End: Complemental strand, 28345900 - 28345826
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||| ||| |  |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  28345900 taacatcatattcattaacatatacattcatataataattcatcaatcatgaacaacatcatataacatcatatt 28345826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 190 - 298
Target Start/End: Complemental strand, 21336565 - 21336454
Alignment:
Q  190 gactttgcatcataataacataattcatcaattatg---aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatga 286  Q
    ||||||||||||||||| ||||||||||||||||||   ||||||| |||||||||| ||| || |||  ||||| ||  ||||||||||||| |||| |    
T  21336565 gactttgcatcataatatcataattcatcaattatgaacaacatcatgtaacatcatattcatcaacacatacatccacataataattcatcattcataa 21336466  T
Q  287 acaacatcatat 298  Q
    ||||||||||||    
T  21336465 acaacatcatat 21336454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 309
Target Start/End: Complemental strand, 1384469 - 1384386
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||  ||||||||| ||| || |||| ||||||||| ||||||||||||||||||||||||||| |||||| ||||||||    
T  1384469 aacatcatataacatcatattcatcaacatatacattcatataataattcatcaatcatgaacaacattatataagatcatatt 1384386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 309
Target Start/End: Complemental strand, 14184233 - 14184150
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||  ||||||||| ||| || |||| ||||||||| |||||| ||||||| ||||||||||||||||||||||||||||    
T  14184233 aacatcatataacatcatattcatcaacatatacattcatataataaatcatcaaccatgaacaacatcatataacatcatatt 14184150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 239 - 309
Target Start/End: Original strand, 22686065 - 22686135
Alignment:
Q  239 atcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||| ||| || |||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  22686065 atcatattcatcaacatatacattcatataataattcatcaatcatgaacaacatcatatgacatcatatt 22686135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 14184490 - 14184433
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  14184490 acatatacattcatataataattcatcaaccatgaacaacatcatataacatcatatt 14184433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 188 - 298
Target Start/End: Complemental strand, 21316674 - 21316561
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattatg---aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    ||||||||||||||||||| ||||||| ||||||||||   ||||| | |||||||||| ||| || |||  ||||| ||  ||||||||||||| ||||    
T  21316674 acgactttgcatcataatatcataattaatcaattatgaacaacattatgtaacatcatattcatcaacacatacatccacataataattcatcattcat 21316575  T
Q  285 gaacaacatcatat 298  Q
     |||||||||||||    
T  21316574 aaacaacatcatat 21316561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 258 - 309
Target Start/End: Original strand, 25140573 - 25140624
Alignment:
Q  258 acattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  25140573 acattcatataataattcatcaataatgaacaacatcatataacatcatatt 25140624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 21336417 - 21336367
Alignment:
Q  259 cattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  21336417 cattcatataataattcatcaaccatgaacaacatcatataacatcatatt 21336367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 298
Target Start/End: Original strand, 21368391 - 21368453
Alignment:
Q  236 aacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatat 298  Q
    |||||||| ||| || |||| ||||||||| ||||||||||||||||||||||||||||||||    
T  21368391 aacatcatattcatcaacatatacattcatataataattcatcaatcatgaacaacatcatat 21368453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 36735287 - 36735245
Alignment:
Q  267 taataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  36735287 taataattcatcaatcatgaacaacatcatataacatcatatt 36735245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 293
Target Start/End: Complemental strand, 36736973 - 36736885
Alignment:
Q  208 cataattcatcaattatgaac---atcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacat 293  Q
    |||||||||||||| ||||||   ||||  ||||||||| ||| || |||| ||||||||| |||||||||||||||||||||||||||    
T  36736973 cataattcatcaatcatgaacgacatcatataacatcatattcatcaacatatacattcatataataattcatcaatcatgaacaacat 36736885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 305
Target Start/End: Complemental strand, 14180318 - 14180222
Alignment:
Q  209 ataattcatcaattatgaacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatca 305  Q
    |||| |||||||  ||||||||||  ||| ||||| ||| || |||| ||||||||| |||||| ||||||| |||| |||||||||||||||||||    
T  14180318 ataaatcatcaaccatgaacatcatataatatcatattcatcaacatatacattcatataataaatcatcaagcatggacaacatcatataacatca 14180222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 14180480 - 14180428
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||||  ||||||||||||| ||||||||||||||||||||||||||||    
T  14180480 tacattcatacaataattcatcaagcatgaacaacatcatataacatcatatt 14180428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 14184137 - 14184085
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||||  ||||||||||||| ||||||||||||||||||||||||||||    
T  14184137 tacattcatacaataattcatcaagcatgaacaacatcatataacatcatatt 14184085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 14184420 - 14184368
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||||  |||||||||||||| |||||||||||||||||||||||||||    
T  14184420 tacattcatacaataattcatcaattatgaacaacatcatataacatcatatt 14184368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 309
Target Start/End: Complemental strand, 14184596 - 14184512
Alignment:
Q  225 gaacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||  ||||||||| ||| || |||| |||||| || |||||| ||||||| ||||||||||||||| ||||||||||||    
T  14184596 gaacatcatataacatcatattcatcaacatatacatttatataataaatcatcaagcatgaacaacatcatgtaacatcatatt 14184512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 25140508 - 25140560
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||||  |||||||||||||| |||||||||||||||||||||||||||    
T  25140508 tacattcatacaataattcatcaataatgaacaacatcatataacatcatatt 25140560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 28346050 - 28346010
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  28346050 ataattcatcaatcatgaacaacatcatataacatcatatt 28346010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 298
Target Start/End: Original strand, 23799482 - 23799545
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatat 298  Q
    ||||||||| |||  | |||| ||||||||| ||||||||||||||||||||||||||||||||    
T  23799482 taacatcatattcaacaacatatacattcatataataattcatcaatcatgaacaacatcatat 23799545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 21316524 - 21316474
Alignment:
Q  259 cattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||| |||||||||||||| ||||| ||||||||||||||||||||||    
T  21316524 cattcatataataattcatcaaccatgatcaacatcatataacatcatatt 21316474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 14184286 - 14184213
Alignment:
Q  236 aacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||| ||| || |||| |||||||||  |||||||||||||  || ||||||||||||||||||||||||    
T  14184286 aacatcatattcatcaacatatacattcatacaataattcatcaagtataaacaacatcatataacatcatatt 14184213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 14180393 - 14180341
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||||  |||| |||||||| ||||||||||||||||||||||||||||    
T  14180393 tacattcatacaatagttcatcaagcatgaacaacatcatataacatcatatt 14180341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 36736972 - 36736932
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  36736972 ataattcatcaatcatgaacgacatcatataacatcatatt 36736932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 294
Target Start/End: Original strand, 22690036 - 22690095
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatc 294  Q
    |||||| || ||| || |||| ||||||||| ||||||||||||||||||||||||||||    
T  22690036 taacatgatattcatcaacatatacattcatataataattcatcaatcatgaacaacatc 22690095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 294
Target Start/End: Original strand, 22694632 - 22694691
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatc 294  Q
    |||||| || ||| || |||| ||||||||| ||||||||||||||||||||||||||||    
T  22694632 taacatgatattcatcaacatatacattcatataataattcatcaatcatgaacaacatc 22694691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 45679461 - 45679516
Alignment:
Q  14 attataaatttcagagcatcaaaccctctgctttaaatgaatgattatacattcca 69  Q
    |||||| ||| ||||||||||| |||||  ||||||||||||||||||||||||||    
T  45679461 attatacattccagagcatcaagccctcaactttaaatgaatgattatacattcca 45679516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 293
Target Start/End: Original strand, 20915460 - 20915518
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacat 293  Q
    ||||||||| | | || |||| ||||||||| |||||||||||||||||||||||||||    
T  20915460 taacatcatatacatcaacatatacattcatataataattcatcaatcatgaacaacat 20915518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 307
Target Start/End: Original strand, 25140412 - 25140458
Alignment:
Q  261 ttcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    ||||| ||||||||||||||| |||||||| ||||||||||||||||    
T  25140412 ttcatataataattcatcaataatgaacaagatcatataacatcata 25140458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 1384486 - 1384449
Alignment:
Q  272 attcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||| |||||||||||||||||||||||||||||||    
T  1384486 attcataaatcatgaacaacatcatataacatcatatt 1384449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 10744320 - 10744283
Alignment:
Q  272 attcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  10744320 attcatcaatcataaacaacatcatataacatcatatt 10744283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 260 - 309
Target Start/End: Complemental strand, 14184624 - 14184575
Alignment:
Q  260 attcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||| ||||||||||||||  ||||| |||||||||||||||||||||    
T  14184624 attcatataataattcatcaagaatgaagaacatcatataacatcatatt 14184575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 257 - 298
Target Start/End: Original strand, 23799451 - 23799492
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatat 298  Q
    ||||||||| ||||||||||||||||||||| ||||||||||    
T  23799451 tacattcatataataattcatcaatcatgaataacatcatat 23799492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 21336546 - 21336506
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||||||| |||||||||||||| ||||||||||||    
T  21336546 ataattcatcaattatgaacaacatcatgtaacatcatatt 21336506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 309
Target Start/End: Original strand, 21368201 - 21368285
Alignment:
Q  225 gaacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||  |||||| || ||| || |||| ||||| ||| |||||||||||||| ||| ||  ||||||||||||||||||||    
T  21368201 gaacatcatataacattatattcatcaacatctacatccatataataattcatcaagcattaaacacatcatataacatcatatt 21368285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 25085472 - 25085516
Alignment:
Q  25 cagagcatcaaaccctctgctttaaatgaatgattatacattcca 69  Q
    ||||||||||| |||||  ||||||||||||||||||||||||||    
T  25085472 cagagcatcaagccctcaactttaaatgaatgattatacattcca 25085516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 25140344 - 25140396
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||||  |||||||||||||| |||||||||||||||||| ||| ||||    
T  25140344 tacattcatacaataattcatcaataatgaacaacatcatataaaatcgtatt 25140396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 45679504 - 45679560
Alignment:
Q  14 attataaatttcagagcatcaaaccctctgctttaa-atgaatgattatacattcca 69  Q
    |||||| ||| ||||||||||| |||||| |||||| ||||||||||||||||||||    
T  45679504 attatacattccagagcatcaagccctctactttaatatgaatgattatacattcca 45679560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 309
Target Start/End: Original strand, 25140460 - 25140495
Alignment:
Q  274 tcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||||| ||||||||||||||||||||||||    
T  25140460 tcatcaatcataaacaacatcatataacatcatatt 25140495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 9784862 - 9784916
Alignment:
Q  239 atcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacat 293  Q
    ||||| ||| || |||| ||||||||| |||||| ||||||||||||||||||||    
T  9784862 atcatattcatcaacatatacattcatataataaatcatcaatcatgaacaacat 9784916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 298
Target Start/End: Original strand, 22686149 - 22686187
Alignment:
Q  260 attcatgtaataattcatcaatcatgaacaacatcatat 298  Q
    |||||| ||||||||||||||||||||| ||||||||||    
T  22686149 attcatataataattcatcaatcatgaaaaacatcatat 22686187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 25140637 - 25140687
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    |||||||||  ||||| |||||||| |||||||||||||||||||| ||||    
T  25140637 tacattcataaaataactcatcaataatgaacaacatcatataacaacata 25140687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 221
Target Start/End: Complemental strand, 1384589 - 1384556
Alignment:
Q  188 acgactttgcatcataataacataattcatcaat 221  Q
    ||||||||||||||||||| ||||||||||||||    
T  1384589 acgactttgcatcataatatcataattcatcaat 1384556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 298
Target Start/End: Complemental strand, 10744270 - 10744229
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatat 298  Q
    |||||||||  |||||||||||||| ||||||||||||||||    
T  10744270 tacattcatacaataattcatcaataatgaacaacatcatat 10744229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 22685722 - 22685779
Alignment:
Q  14 attataaatttcagagcatcaaaccctctgctttaa-atgaatgattatacattccaa 70  Q
    |||||| ||| ||||||||||| |||||  |||||| |||||||||||||||||||||    
T  22685722 attatatattccagagcatcaagccctcaactttaatatgaatgattatacattccaa 22685779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 23069222 - 23069165
Alignment:
Q  239 atcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcat 296  Q
    ||||| ||| || |||| ||||||||| |||||| ||||||||||||||||| |||||    
T  23069222 atcatattcatcaacatatacattcatataataaatcatcaatcatgaacaaaatcat 23069165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 297
Target Start/End: Original strand, 38967625 - 38967670
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcata 297  Q
    |||| ||||||||| || ||||||||||||||| ||||||||||||    
T  38967625 acatatacattcatatactaattcatcaatcataaacaacatcata 38967670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 270 - 298
Target Start/End: Complemental strand, 14180522 - 14180494
Alignment:
Q  270 taattcatcaatcatgaacaacatcatat 298  Q
    |||||||||||||||||||||||||||||    
T  14180522 taattcatcaatcatgaacaacatcatat 14180494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 309
Target Start/End: Original strand, 25085666 - 25085706
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||||||| |||||||||||||  ||||||||||||    
T  25085666 ataattcatcaattatgaacaacatcacgtaacatcatatt 25085706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 25085729 - 25085807
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    ||||||||||||| |||||||   |||  ||||||||||||| || |||| ||||||||| ||||||||  ||||||||    
T  25085729 ataattcatcaatcatgaacaacatcatataacatcattttcatcaacatatacattcatataataatttttcaatcat 25085807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 284
Target Start/End: Complemental strand, 36735285 - 36735207
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    ||||||||||||| |||||||   |||  ||||||||| ||| || |||| |||||||||  |||||||||||||||||    
T  36735285 ataattcatcaatcatgaacaacatcatataacatcatattcatcaacatatacattcataaaataattcatcaatcat 36735207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 45679394 - 45679450
Alignment:
Q  14 attataaatttcagagcatcaaaccctctgctttaa-atgaatgattatacattcca 69  Q
    |||||| ||| ||||||||||| |||||  |||||| ||||||||||||||||||||    
T  45679394 attatacattccagagcatcaagccctcaactttaatatgaatgattatacattcca 45679450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 80; Significance: 2e-37; HSPs: 6)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 188 - 306
Target Start/End: Original strand, 559 - 680
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    |||||||||||||||||||  |||||||||||||||||||||   |||||||||||||| ||| |  ||||||||||||| |||||||||||||||||||    
T  559 acgactttgcatcataatattataattcatcaattatgaacaacatcacgtaacatcatattcattaacatgtacattcaagtaataattcatcaatcat 658  T
Q  285 gaacaacatcatataacatcat 306  Q
    ||||||||||||||||||||||    
T  659 gaacaacatcatataacatcat 680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 188 - 306
Target Start/End: Original strand, 6065 - 6186
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    |||||||||||||||||||  |||||||||||||||||||||   |||||||||||||| ||| |  ||||||||||||| |||||||||||||||||||    
T  6065 acgactttgcatcataatattataattcatcaattatgaacaacatcacgtaacatcatattcattaacatgtacattcaagtaataattcatcaatcat 6164  T
Q  285 gaacaacatcatataacatcat 306  Q
    ||||||||||||||||||||||    
T  6165 gaacaacatcatataacatcat 6186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 209 - 307
Target Start/End: Original strand, 643 - 744
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatca 305  Q
    ||||||||||||| |||||||   |||  ||||||||||||| || |||| ||||||||| |||||||||||||||||||| || |||||||||||||||    
T  643 ataattcatcaatcatgaacaacatcatataacatcattttcatcaacatatacattcatataataattcatcaatcatgagcagcatcatataacatca 742  T
Q  306 ta 307  Q
    ||    
T  743 ta 744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 209 - 307
Target Start/End: Original strand, 6149 - 6250
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatca 305  Q
    ||||||||||||| |||||||   |||  ||||||||||||| || |||| ||||||||| |||||||||||||||||||| || |||||||||||||||    
T  6149 ataattcatcaatcatgaacaacatcatataacatcattttcatcaacatatacattcatataataattcatcaatcatgagcagcatcatataacatca 6248  T
Q  306 ta 307  Q
    ||    
T  6249 ta 6250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 309
Target Start/End: Original strand, 580 - 620
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||||||| |||||||||||||  ||||||||||||    
T  580 ataattcatcaattatgaacaacatcacgtaacatcatatt 620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 309
Target Start/End: Original strand, 6086 - 6126
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||||||| |||||||||||||  ||||||||||||    
T  6086 ataattcatcaattatgaacaacatcacgtaacatcatatt 6126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 2e-37; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 188 - 298
Target Start/End: Original strand, 17044242 - 17044355
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    |||| |||||||||||||| ||||||||||||||||||||||   |||||||||||||| ||| || |||||||||||||||||||||||||||||||||    
T  17044242 acgattttgcatcataatatcataattcatcaattatgaacaacctcacgtaacatcatattcatcaacatgtacattcatgtaataattcatcaatcat 17044341  T
Q  285 gaacaacatcatat 298  Q
    ||||||||||||||    
T  17044342 gaacaacatcatat 17044355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 187 - 309
Target Start/End: Original strand, 17207375 - 17207500
Alignment:
Q  187 gacgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatca 283  Q
    |||||||| ||||||||| | ||||||||||||||||||||||   ||| |||||||||| ||| || |||| ||| ||||| ||||| |||||||||||    
T  17207375 gacgacttcgcatcataagatcataattcatcaattatgaacaacatcatgtaacatcatattcatcaacatataccttcatataatacttcatcaatca 17207474  T
Q  284 tgaacaacatcatataacatcatatt 309  Q
    ||||||||||||||||||||||||||    
T  17207475 tgaacaacatcatataacatcatatt 17207500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 188 - 284
Target Start/End: Complemental strand, 53646783 - 53646684
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    |||||||||||||||||||  |||||||||||||||||||||   |||||||||||||| ||| || |||||||||||||||||||||||||||||||||    
T  53646783 acgactttgcatcataatattataattcatcaattatgaacaatatcacgtaacatcatattcatcaacatgtacattcatgtaataattcatcaatcat 53646684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 188 - 309
Target Start/End: Original strand, 24545824 - 24545948
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    ||||||||||||||||||| ||||||||||||||||| ||||   ||| |||||||||| ||  || |||| ||| ||||| ||||| ||||||||||||    
T  24545824 acgactttgcatcataatatcataattcatcaattataaacaacatcatgtaacatcatatttatcaacatataccttcatataatacttcatcaatcat 24545923  T
Q  285 gaacaacatcatataacatcatatt 309  Q
    |||||||||||||  ||||||||||    
T  24545924 gaacaacatcataagacatcatatt 24545948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 3528285 - 3528181
Alignment:
Q  208 cataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatc 304  Q
    |||||||||||||| |||||||   |||  ||||||||| ||| |  |||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3528285 cataattcatcaatcatgaacaacatcatataacatcatattcattaacatatacattcatataataattcatcaatcatgaacaacatcatataacatc 3528186  T
Q  305 atatt 309  Q
    |||||    
T  3528185 atatt 3528181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 25201202 - 25201306
Alignment:
Q  208 cataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatc 304  Q
    |||||||||||||| |||||||   |||  ||||||||| ||| || |||| ||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  25201202 cataattcatcaatcatgaacaacatcatataacatcatattcatcaacatatacattcatataataattcatcaatcatgaacaacatcacataacatc 25201301  T
Q  305 atatt 309  Q
    |||||    
T  25201302 atatt 25201306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 309
Target Start/End: Original strand, 12540567 - 12540670
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatca 305  Q
    ||||||||||||| |||||||   |||  ||||||||| ||| ||||||| ||||||||  ||||||||||||||||||||| ||||||| |||||||||    
T  12540567 ataattcatcaatcatgaacaacatcatataacatcatattcatcgacatatacattcaaataataattcatcaatcatgaataacatcagataacatca 12540666  T
Q  306 tatt 309  Q
    ||||    
T  12540667 tatt 12540670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 309
Target Start/End: Original strand, 17207586 - 17207689
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatca 305  Q
    ||||||||||||| |||||||   |||  |||| |||| ||| || |||| ||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  17207586 ataattcatcaatcatgaacaacatcatataacctcatattcatctacatatacattcatataataattcatcaatcatgaacaacatcatataacctca 17207685  T
Q  306 tatt 309  Q
    ||||    
T  17207686 tatt 17207689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 210 - 309
Target Start/End: Original strand, 14519578 - 14519680
Alignment:
Q  210 taattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcat 306  Q
    |||||||| |||||||||||   |||  ||||||||| ||  || |||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  14519578 taattcattaattatgaacaacatcatataacatcatatttatcaacatatacattcatataataattcataaatcatgaacaacatcatataacatcat 14519677  T
Q  307 att 309  Q
    |||    
T  14519678 att 14519680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 308
Target Start/End: Complemental strand, 3528090 - 3527991
Alignment:
Q  209 ataattcatcaattatgaacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatat 308  Q
    |||||||| |||| ||||||||||  ||||||||| ||| || ||||  |||||||| |||||||||| |||||||||||||||||||||| || |||||    
T  3528090 ataattcagcaatcatgaacatcatataacatcatattcatcaacatacacattcatataataattcagcaatcatgaacaacatcatatatcaacatat 3527991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 309
Target Start/End: Original strand, 17207523 - 17207626
Alignment:
Q  209 ataattcatcaattatgaacatca-cgtaa-cat-cattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatca 305  Q
    ||||||||||||| |||||||||| | ||| ||| ||| ||| || |||| ||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  17207523 ataattcatcaatcatgaacatcatcataaacattcatattcatcaacatatacattcatataataattcatcaatcatgaacaacatcatataacctca 17207622  T
Q  306 tatt 309  Q
    ||||    
T  17207623 tatt 17207626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 309
Target Start/End: Complemental strand, 21846379 - 21846296
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||  ||||||||| ||| || |||| ||||||||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  21846379 aacatcatataacatcatattcatcaacatatacattcatataataattcaccaatcatgaacaacatcatataaaatcatatt 21846296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 260 - 309
Target Start/End: Original strand, 12540558 - 12540607
Alignment:
Q  260 attcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  12540558 attcatataataattcatcaatcatgaacaacatcatataacatcatatt 12540607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 30175286 - 30175229
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  30175286 acatatacattcatataataattcatcaaccatgaacaacatcatataacatcatatt 30175229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 15025961 - 15025909
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  15025961 tacattcatataataattcatcaatcatgaataacatcatataacatcatatt 15025909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 305
Target Start/End: Complemental strand, 21846232 - 21846184
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatca 305  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  21846232 tacattcatataataattcatcaatcatgaacaacatcatataacatca 21846184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 25201370 - 25201422
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  25201370 tacattcatataataattcatcaatcatgaacaaaatcatataacatcatatt 25201422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 252 - 308
Target Start/End: Complemental strand, 50351914 - 50351858
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatat 308  Q
    |||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  50351914 acatatacattcatataataattcatcaatcatgaacaacaccatataacatcatat 50351858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 258 - 309
Target Start/End: Complemental strand, 16180394 - 16180343
Alignment:
Q  258 acattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  16180394 acattcatataataattcatcaataatgaacaacatcatataacatcatatt 16180343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 309
Target Start/End: Complemental strand, 22842430 - 22842347
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||  ||||||||| ||| || |||| ||||||||| |||||||||| |||| ||||||||||||||| |||||||||||    
T  22842430 aacatcatataacatcatattcatcaacatatacattcatataataattcaacaattatgaacaacatcatagaacatcatatt 22842347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 260 - 309
Target Start/End: Complemental strand, 54331055 - 54331006
Alignment:
Q  260 attcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  54331055 attcatataacaattcatcaatcatgaacaacatcatataacatcatatt 54331006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 309
Target Start/End: Original strand, 33564450 - 33564519
Alignment:
Q  238 catcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||| ||| || |||| |||||||||  |||||||||||||||| |||||||||||||||||||||||||    
T  33564450 catcatattcatcaacatatacattcat--aataattcatcaatcaagaacaacatcatataacatcatatt 33564519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 305
Target Start/End: Complemental strand, 54331135 - 54331064
Alignment:
Q  236 aacatcattttcttcgacatgtacattcatgtaata--attcatcaatcatgaacaacatcatataacatca 305  Q
    |||||||| ||| || |||| ||||||||| |||||  ||||||||||||||||||||||||||||||||||    
T  54331135 aacatcatattcatcaacatatacattcatataatataattcatcaatcatgaacaacatcatataacatca 54331064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 274
Target Start/End: Complemental strand, 1208822 - 1208733
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattatg---aacatcacgtaacatcattttcttcgacatgtacattcatgtaataatt 274  Q
    |||||||  |||||||||| ||||||||||||||||||   ||||||| |||||||||| ||| || |||| ||||||||| ||||||||    
T  1208822 acgacttcacatcataatatcataattcatcaattatgaacaacatcatgtaacatcatattcatcaacatatacattcatataataatt 1208733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 309
Target Start/End: Original strand, 11191567 - 11191618
Alignment:
Q  258 acattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||| ||||||||||||||| |||||||||||||| ||||||||||||    
T  11191567 acattcatataataattcatcaataatgaacaacatcatgtaacatcatatt 11191618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 309
Target Start/End: Complemental strand, 54331239 - 54331125
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattatgaacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaa 287  Q
    |||||||  |||||| ||| ||||||||||||||||| ||||       ||||||| ||  || |||||||| || || ||||| |||||||||||||||    
T  54331239 acgacttcacatcatgatatcataattcatcaattataaaca-------acatcatgtttatcaacatgtacctttatataatacttcatcaatcatgaa 54331147  T
Q  288 caacatcatataacatcatatt 309  Q
    |||||||||| |||||||||||    
T  54331146 caacatcatacaacatcatatt 54331125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 298
Target Start/End: Original strand, 25201266 - 25201358
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatat 298  Q
    ||||||||||||| |||||||   |||| ||||||||| ||| || ||||  |||||||| ||||||||||| |||||||||||| |||||||    
T  25201266 ataattcatcaatcatgaacaacatcacataacatcatattcatcaacataaacattcatataataattcattaatcatgaacaatatcatat 25201358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 6806336 - 6806279
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||| ||||||||| | ||||||||| |||||||||||||||||| ||||||||||||    
T  6806336 acatatacattcatatgataattcataaatcatgaacaacatcatgtaacatcatatt 6806279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 50351788 - 50351731
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||| ||||||||| |||||||| ||||||||||||| ||| ||||||||||||||||    
T  50351788 acatatacattcatataataatttatcaatcatgaaccacaccatataacatcatatt 50351731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 14519565 - 14519617
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||| || |||||||| ||| |||||||||||||||||||||||||||    
T  14519565 tacattcatatagtaattcattaattatgaacaacatcatataacatcatatt 14519617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 229 - 309
Target Start/End: Complemental strand, 24553771 - 24553691
Alignment:
Q  229 atcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||| |||||||||| ||  || |||| ||| ||||| ||||| |||||||||||||||||||||||||  ||||||||||    
T  24553771 atcatgtaacatcatatttatcaacatataccttcatataatacttcatcaatcatgaacaacatcataacacatcatatt 24553691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 229 - 309
Target Start/End: Complemental strand, 24556821 - 24556741
Alignment:
Q  229 atcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||| |||||||||| ||  || |||| ||| ||||| ||||| |||||||||||||||||||||||||  ||||||||||    
T  24556821 atcatgtaacatcatatttatcaacatataccttcatataatacttcatcaatcatgaacaacatcataagacatcatatt 24556741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 252 - 308
Target Start/End: Complemental strand, 50351851 - 50351795
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatat 308  Q
    |||| ||||||||| |||||||| ||||||||||||| ||| |||||||||||||||    
T  50351851 acatatacattcatataataatttatcaatcatgaaccacaccatataacatcatat 50351795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 309
Target Start/End: Complemental strand, 3528221 - 3528121
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatca 305  Q
    ||||||||||||| |||||||   |||  ||||||||| ||| || ||||  |||||||| |||||||||| ||||||||   |||||||||||||||||    
T  3528221 ataattcatcaatcatgaacaacatcatataacatcatattcatcaacatacacattcatataataattcagcaatcatg---aacatcatataacatca 3528125  T
Q  306 tatt 309  Q
    ||||    
T  3528124 tatt 3528121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 298
Target Start/End: Original strand, 11191490 - 11191553
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatat 298  Q
    ||||||||| ||| || |||| |||||||||  |||||||||||||| ||||||||||||||||    
T  11191490 taacatcatattcatcaacatatacattcatacaataattcatcaataatgaacaacatcatat 11191553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 307
Target Start/End: Original strand, 12540630 - 12540730
Alignment:
Q  209 ataattcatcaattatgaa---catcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatca 305  Q
    ||||||||||||| |||||   |||||  ||||||||| ||| || |||| |||||||||||||||||||||| || || |||  |||||||||||||||    
T  12540630 ataattcatcaatcatgaataacatcagataacatcatattcatcaacatatacattcatgtaataattcatcgattataaac-gcatcatataacatca 12540728  T
Q  306 ta 307  Q
    ||    
T  12540729 ta 12540730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 297
Target Start/End: Original strand, 17207480 - 17207551
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcata 297  Q
    |||||||  ||||||||| ||| || |||| |||| |||| ||||||||||||||||||||||| |||||||    
T  17207480 aacatcatataacatcatattcatcaacatatacactcatataataattcatcaatcatgaacatcatcata 17207551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 40812120 - 40812179
Alignment:
Q  239 atcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatat 298  Q
    ||||| ||| ||||||| ||||||||| ||| |||||||||||||| |||||||||||||    
T  40812120 atcatattcatcgacatatacattcatataaaaattcatcaatcataaacaacatcatat 40812179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 15565749 - 15565791
Alignment:
Q  187 gacgactttgcatcataataacataattcatcaattatgaaca 229  Q
    |||||||||||||||||||| ||||||||||||||||| ||||    
T  15565749 gacgactttgcatcataatatcataattcatcaattataaaca 15565791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 284
Target Start/End: Original strand, 33564499 - 33564557
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    |||||||  ||||||||| ||| || |||| ||||||||||||||||||||||||||||    
T  33564499 aacatcatataacatcatattcatcaacatatacattcatgtaataattcatcaatcat 33564557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 53646961 - 53646911
Alignment:
Q  14 attataaatttcagagcatcaaaccctctgctttaaatgaatgattataca 64  Q
    |||||| ||| ||||||||||| ||||| ||||||||||||||||||||||    
T  53646961 attatacattccagagcatcaagccctcagctttaaatgaatgattataca 53646911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 298
Target Start/End: Original strand, 12470080 - 12470141
Alignment:
Q  237 acatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatat 298  Q
    ||||||| ||| || |||| ||||||||| |||||| |||||||||||||||||||| ||||    
T  12470080 acatcatattcatcaacatatacattcatataataaatcatcaatcatgaacaacattatat 12470141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 252 - 293
Target Start/End: Complemental strand, 18700232 - 18700191
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacat 293  Q
    |||| ||||||||| |||||||||||||||||||||||||||    
T  18700232 acatatacattcatataataattcatcaatcatgaacaacat 18700191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 262 - 299
Target Start/End: Complemental strand, 50756195 - 50756158
Alignment:
Q  262 tcatgtaataattcatcaatcatgaacaacatcatata 299  Q
    |||| |||||||||||||||||||||||||||||||||    
T  50756195 tcatataataattcatcaatcatgaacaacatcatata 50756158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 1208801 - 1208761
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||||||| |||||||||||||| ||||||||||||    
T  1208801 ataattcatcaattatgaacaacatcatgtaacatcatatt 1208761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 298
Target Start/End: Original strand, 11562164 - 11562204
Alignment:
Q  258 acattcatgtaataattcatcaatcatgaacaacatcatat 298  Q
    |||||||| ||||||||||||||| ||||||||||||||||    
T  11562164 acattcatataataattcatcaataatgaacaacatcatat 11562204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 12918186 - 12918146
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||| |||||||||||||||||||||| ||||||||||||    
T  12918186 ataatgcatcaatcatgaacaacatcatttaacatcatatt 12918146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 298
Target Start/End: Complemental strand, 16180330 - 16180290
Alignment:
Q  258 acattcatgtaataattcatcaatcatgaacaacatcatat 298  Q
    |||||||| ||||||||||||||| ||||||||||||||||    
T  16180330 acattcatataataattcatcaataatgaacaacatcatat 16180290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 21846399 - 21846359
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||| | ||||||||||||||||||||||||||||||||    
T  21846399 ataatttagcaatcatgaacaacatcatataacatcatatt 21846359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 303
Target Start/End: Complemental strand, 24178634 - 24178602
Alignment:
Q  271 aattcatcaatcatgaacaacatcatataacat 303  Q
    |||||||||||||||||||||||||||||||||    
T  24178634 aattcatcaatcatgaacaacatcatataacat 24178602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 309
Target Start/End: Complemental strand, 24553289 - 24553217
Alignment:
Q  237 acatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||| ||| || |||| |||||||||  |||||||| ||||||| ||||||||||||| | |||||||||    
T  24553289 acatcatattcatcaacatatacattcatacaataattcgtcaatcaagaacaacatcataaatcatcatatt 24553217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 309
Target Start/End: Complemental strand, 24553391 - 24553343
Alignment:
Q  261 ttcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||| ||||| |||||||||||||||||||||||||  ||||||||||    
T  24553391 ttcatataatacttcatcaatcatgaacaacatcataagacatcatatt 24553343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 309
Target Start/End: Complemental strand, 24553637 - 24553565
Alignment:
Q  237 acatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||| ||| || |||| |||||||||  |||||||| ||||||| ||||||||||||| | |||||||||    
T  24553637 acatcatattcatcaacatatacattcatacaataattcgtcaatcaagaacaacatcataaatcatcatatt 24553565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 309
Target Start/End: Complemental strand, 24556402 - 24556330
Alignment:
Q  237 acatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||| ||| || |||| |||||||||  |||||||| ||||||| ||||||||||||| | |||||||||    
T  24556402 acatcatattcatcaacatatacattcatacaataattcgtcaatcaagaacaacatcataaatcatcatatt 24556330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 309
Target Start/End: Complemental strand, 24556441 - 24556393
Alignment:
Q  261 ttcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||| ||||| |||||||||||||||||||||||||  ||||||||||    
T  24556441 ttcatataatacttcatcaatcatgaacaacatcataagacatcatatt 24556393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 309
Target Start/End: Complemental strand, 24556687 - 24556615
Alignment:
Q  237 acatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||| ||| || |||| |||||||||  |||||||| ||||||| ||||||||||||| | |||||||||    
T  24556687 acatcatattcatcaacatatacattcatacaataattcgtcaatcaagaacaacatcataaatcatcatatt 24556615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 299
Target Start/End: Complemental strand, 50756143 - 50756095
Alignment:
Q  251 gacatgtacattcatgtaataattcatcaatcatgaacaacatcatata 299  Q
    ||||| |||| |||| ||||||||||| |||||||||||||||||||||    
T  50756143 gacatatacactcatataataattcataaatcatgaacaacatcatata 50756095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 11191656 - 11191706
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    |||||||||  ||||| |||||||| |||||||||||||||||||| ||||    
T  11191656 tacattcatacaataactcatcaataatgaacaacatcatataacaacata 11191706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 14671104 - 14671158
Alignment:
Q  239 atcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacat 293  Q
    ||||| ||| || |||| ||||||||| |||||| ||||||||||||||||||||    
T  14671104 atcatattcatcaacatatacattcatataataaatcatcaatcatgaacaacat 14671158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 14682603 - 14682657
Alignment:
Q  239 atcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacat 293  Q
    ||||| ||| || |||| ||||||||| |||||| ||||||||||||||||||||    
T  14682603 atcatattcatcaacatatacattcatataataaatcatcaatcatgaacaacat 14682657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 309
Target Start/End: Complemental strand, 3528101 - 3528053
Alignment:
Q  258 acattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||| |||||||||| ||||||||   |||||||||||||||||||||    
T  3528101 acattcatataataattcagcaatcatg---aacatcatataacatcatatt 3528053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 309
Target Start/End: Original strand, 11562110 - 11562151
Alignment:
Q  268 aataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||||||||| |||||||||||||||  ||||||||||    
T  11562110 aataattcatcaataatgaacaacatcataatacatcatatt 11562151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Original strand, 11562203 - 11562240
Alignment:
Q  272 attcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  11562203 attcatcaatcataaacaacatcatataacattatatt 11562240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 297
Target Start/End: Complemental strand, 11913961 - 11913916
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcata 297  Q
    |||||||||| ||| || ||||||||||||||| ||||||||||||    
T  11913961 acatgtacatacatatactaattcatcaatcataaacaacatcata 11913916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 12540318 - 12540375
Alignment:
Q  14 attataaatttcagagcatcaaaccctctgctttaa-atgaatgattatacattccaa 70  Q
    |||||| ||| ||||||||||| |||||  |||||| |||||||||||||||||||||    
T  12540318 attatacattccagagcatcaagccctcaactttaacatgaatgattatacattccaa 12540375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 297
Target Start/End: Original strand, 25237042 - 25237087
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcata 297  Q
    |||| ||||||||| || ||||||||||||||| ||||||||||||    
T  25237042 acatatacattcatatactaattcatcaatcataaacaacatcata 25237087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 283
Target Start/End: Complemental strand, 54331026 - 54330969
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatca 283  Q
    |||||||  ||||||||| ||| || |||| ||||||||| |||||||||||||||||    
T  54331026 aacatcatataacatcatattcatcaacatatacattcatataataattcatcaatca 54330969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 309
Target Start/End: Original strand, 15565771 - 15565811
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||||||| || ||||||||||| ||||||||||||    
T  15565771 ataattcatcaattataaacaacatcatgtaacatcatatt 15565811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 220
Target Start/End: Complemental strand, 22842486 - 22842454
Alignment:
Q  188 acgactttgcatcataataacataattcatcaa 220  Q
    ||||||||||||||||||| |||||||||||||    
T  22842486 acgactttgcatcataatatcataattcatcaa 22842454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 220
Target Start/End: Complemental strand, 45804276 - 45804244
Alignment:
Q  188 acgactttgcatcataataacataattcatcaa 220  Q
    ||||||||||||||||||| |||||||||||||    
T  45804276 acgactttgcatcataatatcataattcatcaa 45804244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 220
Target Start/End: Complemental strand, 50351946 - 50351914
Alignment:
Q  188 acgactttgcatcataataacataattcatcaa 220  Q
    ||||||||||||||||||| |||||||||||||    
T  50351946 acgactttgcatcataatatcataattcatcaa 50351914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 79; Significance: 6e-37; HSPs: 3)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 188 - 309
Target Start/End: Complemental strand, 64855 - 64731
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    ||||||||||||||||||| |||||||||||||| |||||||   |||||||||||||| ||| || |||||||||||  || |||||||||||||||||    
T  64855 acgactttgcatcataatatcataattcatcaataatgaacaacatcacgtaacatcatattcatcaacatgtacatttgtgcaataattcatcaatcat 64756  T
Q  285 gaacaacatcatataacatcatatt 309  Q
    |||||||||||||||||||||||||    
T  64755 gaacaacatcatataacatcatatt 64731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 65051 - 64996
Alignment:
Q  14 attataaatttcagagcatcaaaccctctgctttaaatgaatgattatacattcca 69  Q
    |||||| ||| |||||||||||||||||  ||||||||||||||||||||||||||    
T  65051 attatacattccagagcatcaaaccctcaactttaaatgaatgattatacattcca 64996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 281
Target Start/End: Complemental strand, 64771 - 64696
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaat 281  Q
    ||||||||||||| |||||||   |||  ||||||||| ||| || |||| ||||||||| |||||||||||||||    
T  64771 ataattcatcaatcatgaacaacatcatataacatcatattcatcaacatatacattcatataataattcatcaat 64696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 9e-33; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 191 - 309
Target Start/End: Original strand, 29044429 - 29044550
Alignment:
Q  191 actttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaa 287  Q
    |||||||||||||||| |||||||||||||| |||||||   |||  ||||||||| ||| || |||| ||||||||| |||||||||||||||||||||    
T  29044429 actttgcatcataatatcataattcatcaatcatgaacaacatcatataacatcatattcatcaacatatacattcatataataattcatcaatcatgaa 29044528  T
Q  288 caacatcatataacatcatatt 309  Q
    ||||||||||||||||||||||    
T  29044529 caacatcatataacatcatatt 29044550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 208 - 307
Target Start/End: Original strand, 35056586 - 35056688
Alignment:
Q  208 cataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatc 304  Q
    |||||||||||||| |||||||   |||  ||||||||| ||| || |||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  35056586 cataattcatcaatcatgaacaacatcatataacatcatattcatcaacatatacattcatataataattcatcaatcatgaacaacatcatataacatc 35056685  T
Q  305 ata 307  Q
    |||    
T  35056686 ata 35056688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 235 - 309
Target Start/End: Complemental strand, 20411431 - 20411357
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||| ||| || |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  20411431 taacatcatattcatcaacatatacattcatataataattcatcaatcatgaacaacatcatataacatcatatt 20411357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 196 - 309
Target Start/End: Complemental strand, 21680740 - 21680624
Alignment:
Q  196 gcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaaca 292  Q
    ||||||||||| ||||||||||||||||| ||||   ||| |||||||||  ||  || |||| ||| ||||| ||||| ||||||||||||||||||||    
T  21680740 gcatcataatatcataattcatcaattataaacaacatcatgtaacatcaaatttatcaacatataccttcatataatacttcatcaatcatgaacaaca 21680641  T
Q  293 tcatataacatcatatt 309  Q
    ||||| |||||||||||    
T  21680640 tcatacaacatcatatt 21680624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 10445381 - 10445438
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10445381 acatatacattcatataataattcatcaatcatgaacaacatcatataacatcatatt 10445438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 13284939 - 13284996
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  13284939 acatatacattcatataataattcatcaatcatgaacaacatcatataacatcatatt 13284996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 35056749 - 35056806
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  35056749 acatatacattcatataataattcatcaatcatgaacaacatcatataacatcatatt 35056806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 22556371 - 22556481
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    ||||||| |||||||| ||  |||||||||||||||||||||   ||| |||||||||| ||| || |||| ||| ||||| ||||| ||||||||||||    
T  22556371 acgacttcgcatcatagtattataattcatcaattatgaacaacatcatgtaacatcatattcatcaacatataccttcatataatacttcatcaatcat 22556470  T
Q  285 gaacaacatca 295  Q
    |||||||||||    
T  22556471 gaacaacatca 22556481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 309
Target Start/End: Original strand, 25920998 - 25921081
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||  ||||||||| ||| || |||| ||||||| | |||||||||||||||||| ||||||||||||||||||||||||    
T  25920998 aacatcatataacatcatattcatcaacatatacattcgtataataattcatcaatcataaacaacatcatataacatcatatt 25921081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 32259088 - 32259161
Alignment:
Q  236 aacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||| ||| || |||| ||||||||| |||||||||||||||||||||||||| |||||||||| |||||    
T  32259088 aacatcatattcatcaacatatacattcatataataattcatcaatcatgaacaacaccatataacattatatt 32259161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 18584919 - 18584971
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  18584919 tacatccatataataattcatcaatcatgaacaacatcatataacatcatatt 18584971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 309
Target Start/End: Complemental strand, 19957736 - 19957634
Alignment:
Q  210 taattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcat 306  Q
    |||||||| |||||||||||   |||  ||||||||| ||  || |||| ||||||||| ||||||||||| ||||||||||||||||| ||||||||||    
T  19957736 taattcattaattatgaacaatatcatataacatcatatttatcaacatatacattcatataataattcataaatcatgaacaacatcaaataacatcat 19957637  T
Q  307 att 309  Q
    |||    
T  19957636 att 19957634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 209 - 309
Target Start/End: Original strand, 13284956 - 13285056
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatca 305  Q
    ||||||||||||| |||||||   |||  ||||||||| ||| || |||| |||||||||   |||||| ||||||||||||||||||||||||||||||    
T  13284956 ataattcatcaatcatgaacaacatcatataacatcatattcatcaacatatacattcat---ataattaatcaatcatgaacaacatcatataacatca 13285052  T
Q  306 tatt 309  Q
    ||||    
T  13285053 tatt 13285056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 309
Target Start/End: Original strand, 25920935 - 25921018
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||  ||||||| | ||| || |||| ||||||||  |||||||||||||||||| ||||||||||||||||||||||||    
T  25920935 aacatcatataacatcgtattcatcaacatatacattcacataataattcatcaatcataaacaacatcatataacatcatatt 25921018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 209 - 307
Target Start/End: Complemental strand, 20411397 - 20411299
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatca 305  Q
    ||||||||||||| |||||||   |||  ||||||||| ||| || |||| ||||||||| |||||||||||||||||||   |||||||||||||||||    
T  20411397 ataattcatcaatcatgaacaacatcatataacatcatattcatcaacatatacattcatataataattcatcaatcatg---aacatcatataacatca 20411301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 22556482 - 22556539
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||| ||||||||| ||||| ||||||||||||||| |||||||||||||||||||||    
T  22556482 acatatacattcatataatacttcatcaatcatgaaaaacatcatataacatcatatt 22556539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 209 - 297
Target Start/End: Original strand, 35056650 - 35056741
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcata 297  Q
    ||||||||||||| |||||||   |||  |||||||||  || || |||| ||||||||| |||||||||||||||||||||||||||||||    
T  35056650 ataattcatcaatcatgaacaacatcatataacatcataatcatcaacatatacattcatataataattcatcaatcatgaacaacatcata 35056741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 309
Target Start/End: Original strand, 18928044 - 18928113
Alignment:
Q  238 catcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||| ||| || |||| |||||||||  |||||||||||||||||||||||||||||||||||| |||||    
T  18928044 catcatattcatcaacatatacattcat--aataattcatcaatcatgaacaacatcatataacataatatt 18928113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 269 - 309
Target Start/End: Original strand, 35056587 - 35056627
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  35056587 ataattcatcaatcatgaacaacatcatataacatcatatt 35056627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 309
Target Start/End: Original strand, 22556519 - 22556602
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||  ||||||||| ||| |  |||| ||||||||  ||||| ||||||||||||||||||||||||||| |||||||||    
T  22556519 aacatcatataacatcatattcattaacatatacattcaaataatacttcatcaatcatgaacaacatcatatatcatcatatt 22556602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 19957621 - 19957569
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||||  |||||||||||||| || ||||||||||||||||||||||||    
T  19957621 tacattcatacaataattcatcaataataaacaacatcatataacatcatatt 19957569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 307
Target Start/End: Complemental strand, 18455876 - 18455773
Alignment:
Q  207 acataattcatcaattatgaacatcacg---taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacat 303  Q
    |||||||||||||||||| |||| || |   ||||||||||||  || |||| ||| ||||| ||||| |||||||||||||||||  |||||| || ||    
T  18455876 acataattcatcaattataaacaacatgatgtaacatcatttttgtcaacatataccttcatataatacttcatcaatcatgaacataatcatacaaaat 18455777  T
Q  304 cata 307  Q
    ||||    
T  18455776 cata 18455773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 309
Target Start/End: Original strand, 29044510 - 29044613
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatca 305  Q
    ||||||||||||| |||||||   |||  ||||||||| ||| || |||| ||||| ||| ||||||||||||  || |||| | |||||||||||||||    
T  29044510 ataattcatcaatcatgaacaacatcatataacatcatattcatcaacatatacatccatataataattcatctttcctgaatagcatcatataacatca 29044609  T
Q  306 tatt 309  Q
    ||||    
T  29044610 tatt 29044613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 19957749 - 19957697
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||| || |||||||| ||| |||||||| ||||||||||||||||||    
T  19957749 tacattcatatagtaattcattaattatgaacaatatcatataacatcatatt 19957697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 309
Target Start/End: Original strand, 22556392 - 22556432
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||||||| |||||||||||||| ||||||||||||    
T  22556392 ataattcatcaattatgaacaacatcatgtaacatcatatt 22556432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 19773481 - 19773427
Alignment:
Q  239 atcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacat 293  Q
    ||||| ||| || |||| ||||||||| |||||| ||||||||||||||||||||    
T  19773481 atcatattcatcaacatatacattcatataataaatcatcaatcatgaacaacat 19773427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 297
Target Start/End: Original strand, 15875557 - 15875602
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcata 297  Q
    |||| ||||| ||| |||||||||||||||||| ||||||||||||    
T  15875557 acatatacatacatataataattcatcaatcataaacaacatcata 15875602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 221
Target Start/End: Complemental strand, 19957786 - 19957753
Alignment:
Q  188 acgactttgcatcataataacataattcatcaat 221  Q
    ||||||||||||||||||| ||||||||||||||    
T  19957786 acgactttgcatcataatatcataattcatcaat 19957753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 23655524 - 23655553
Alignment:
Q  273 ttcatcaatcatgaacaacatcatataaca 302  Q
    ||||||||||||||||||||||||||||||    
T  23655524 ttcatcaatcatgaacaacatcatataaca 23655553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 18928073 - 18928151
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    ||||||||||||| |||||||   |||  |||||| || ||| || |||| ||||||||| ||||||||||||||||||    
T  18928073 ataattcatcaatcatgaacaacatcatataacataatattcatcaacatatacattcatataataattcatcaatcat 18928151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 224
Target Start/End: Complemental strand, 21686591 - 21686555
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattat 224  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  21686591 acgacttcgcatcataatatcataattcatcaattat 21686555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 23492713 - 23492661
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||||  |||||| | ||||| || ||||||||||||||||||||||||    
T  23492713 tacattcatacaataatccttcaataataaacaacatcatataacatcatatt 23492661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 23498311 - 23498259
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||||  |||||| | ||||| || ||||||||||||||||||||||||    
T  23498311 tacattcatacaataatccttcaataataaacaacatcatataacatcatatt 23498259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 4e-32; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 188 - 309
Target Start/End: Complemental strand, 7321738 - 7321614
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    ||||||| ||||||||||| ||||||||||||||||||||||   ||| |||||||||| ||| || |||| ||||||||| ||||||||||||||||||    
T  7321738 acgacttcgcatcataatatcataattcatcaattatgaacaacatcatgtaacatcatgttcatcaacatatacattcatataataattcatcaatcat 7321639  T
Q  285 gaacaacatcatataacatcatatt 309  Q
    |||||||||||| |||||| |||||    
T  7321638 gaacaacatcatgtaacattatatt 7321614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 188 - 309
Target Start/End: Original strand, 50543827 - 50543951
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    ||||||| ||||||||||| ||||||||||||||||||||||   ||| |||||||||| ||| || |||| ||||||||| ||||| || |||||||||    
T  50543827 acgacttcgcatcataatatcataattcatcaattatgaacaacatcatgtaacatcatattcatcaacatatacattcatataatactttatcaatcat 50543926  T
Q  285 gaacaacatcatataacatcatatt 309  Q
    |||||||||||||||||||||||||    
T  50543927 gaacaacatcatataacatcatatt 50543951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 187 - 307
Target Start/End: Complemental strand, 14793312 - 14793189
Alignment:
Q  187 gacgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatca 283  Q
    |||||||| ||||||||||| ||||||||||||||||| ||||   ||| |||||||||| ||| || | || ||||||||| |||||||||||||||||    
T  14793312 gacgacttcgcatcataatatcataattcatcaattataaacaacatcatgtaacatcatattcatcaatatatacattcatataataattcatcaatca 14793213  T
Q  284 tgaacaacatcatataacatcata 307  Q
    |||| |||||||| ||||||||||    
T  14793212 tgaataacatcatgtaacatcata 14793189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 196 - 309
Target Start/End: Original strand, 18120714 - 18120830
Alignment:
Q  196 gcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaaca 292  Q
    ||||||||||| |||| ||||| |||||||||||   ||| |||||||||| ||| || |||| ||| ||||| ||||| ||||||||||||||||||||    
T  18120714 gcatcataataccatagttcataaattatgaacaacatcatgtaacatcatattcatcaacatataccttcatataatacttcatcaatcatgaacaaca 18120813  T
Q  293 tcatataacatcatatt 309  Q
    |||||||||||||||||    
T  18120814 tcatataacatcatatt 18120830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 188 - 309
Target Start/End: Complemental strand, 28477595 - 28477471
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    ||||||||||||||| ||| ||||||||||||||||| ||||   ||| |||||||||| ||  || |||| ||| ||||| ||||| ||||||||||||    
T  28477595 acgactttgcatcatgatatcataattcatcaattataaacaacatcatgtaacatcatatttatcaacatataccttcatataatacttcatcaatcat 28477496  T
Q  285 gaacaacatcatataacatcatatt 309  Q
    ||||||||||||||||| |||||||    
T  28477495 gaacaacatcatataacctcatatt 28477471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 188 - 309
Target Start/End: Complemental strand, 24720644 - 24720520
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    ||||||| ||||||||||| ||||||||||||||||| ||||   ||| |||||||||||||  || |||| ||| ||||| ||||| ||||||||||||    
T  24720644 acgacttcgcatcataatatcataattcatcaattataaacaacatcatgtaacatcatttttatcaacatataccttcatataatacttcatcaatcat 24720545  T
Q  285 gaacaacatcatataacatcatatt 309  Q
    |||||  |||||| |||||||||||    
T  24720544 gaacataatcatacaacatcatatt 24720520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 187 - 309
Target Start/End: Original strand, 39060318 - 39060443
Alignment:
Q  187 gacgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatca 283  Q
    |||||||||||||||||||| ||||||||||| ||  | ||||   |||  ||||||||| ||| |   ||| ||||||||| |||||||||||||||||    
T  39060318 gacgactttgcatcataatatcataattcatcgatcgtaaacaacatcatataacatcatattcattagcatatacattcatataataattcatcaatca 39060417  T
Q  284 tgaacaacatcatataacatcatatt 309  Q
    |||||||||||||||||| |||||||    
T  39060418 tgaacaacatcatataacctcatatt 39060443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 188 - 309
Target Start/End: Original strand, 6833442 - 6833566
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattatgaacatcacgt---aacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    ||||||||||||||||||| |||||||||||||| ||||||| ||  |   |||||||| ||| || || | ||||| ||| ||||||||||||  ||||    
T  6833442 acgactttgcatcataatatcataattcatcaatcatgaacaacatcttataacatcatattcatcaacgtatacatccatataataattcatctttcat 6833541  T
Q  285 gaacaacatcatataacatcatatt 309  Q
    ||||| |||||||||||||||||||    
T  6833542 gaacagcatcatataacatcatatt 6833566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 257 - 307
Target Start/End: Complemental strand, 21244633 - 21244583
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21244633 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 21244583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 22824181 - 22824111
Alignment:
Q  239 atcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||| ||| || |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  22824181 atcatattcatcaacatatacattcatataataattcatcaatcatgaacaacatcatataacatcatatt 22824111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 50544146 - 50544203
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  50544146 acatatacattcatataataattcatcaatcatgaacaacatcatataacatcatatt 50544203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 309
Target Start/End: Original strand, 18120810 - 18120893
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||  ||||||||| ||| || |||| ||||||||| |||||||||||||||||||||||||||||||  ||||||||||    
T  18120810 aacatcatataacatcatattcatcaacatatacattcatataataattcatcaatcatgaacaacatcataggacatcatatt 18120893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 309
Target Start/End: Original strand, 48301196 - 48301279
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||  ||||||||| ||| || |||| ||||||||| |||||||||||||| || |||||||||||||||||||||||||    
T  48301196 aacatcatataacatcatattcatcaacatatacattcatataataattcatcaaccacgaacaacatcatataacatcatatt 48301279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 236 - 302
Target Start/End: Original strand, 12710163 - 12710229
Alignment:
Q  236 aacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataaca 302  Q
    |||||||| ||| || |||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  12710163 aacatcatattcatcaacatatacattcatataataattcatcaatcatgaacaacatcatataaca 12710229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 235 - 309
Target Start/End: Complemental strand, 14793853 - 14793780
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||| ||| || |||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  14793853 taacatcatattcatcaacatatacattcatataataat-catcaatcatgaacaacatcatataacatcatatt 14793780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 239 - 309
Target Start/End: Original strand, 48301146 - 48301216
Alignment:
Q  239 atcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||| ||| || |||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  48301146 atcatattcatcaacatatacattcatataatatttcatcaatcatgaacaacatcatataacatcatatt 48301216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 34392163 - 34392220
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  34392163 acatatacattcatataataactcatcaatcatgaacaacatcatataacatcatatt 34392220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 296
Target Start/End: Complemental strand, 7321654 - 7321564
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcat 296  Q
    ||||||||||||| |||||||   ||| ||||||| || ||| || |||| ||||||||| ||||||||||||||||||||||||||||||    
T  7321654 ataattcatcaatcatgaacaacatcatgtaacattatattcatcaacatatacattcatataataattcatcaatcatgaacaacatcat 7321564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 252 - 307
Target Start/End: Original strand, 18120899 - 18120954
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    |||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  18120899 acatatacattcatataatacttcatcaatcatgaacaacatcatataacatcata 18120954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 309
Target Start/End: Original strand, 50543931 - 50544014
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||  ||||||||| ||| || |||| ||||||||  |||||||||||||||||||||||||||||||  ||||||||||    
T  50543931 aacatcatataacatcatattcatcaacatatacattcacataataattcatcaatcatgaacaacatcataggacatcatatt 50544014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 21244714 - 21244644
Alignment:
Q  239 atcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||| ||| || |||| ||||||||| |||||||| ||||||||||||||||||||||| ||||||||||    
T  21244714 atcatattcatcaacatatacattcatataataatttatcaatcatgaacaacatcatatgacatcatatt 21244644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 44891823 - 44891873
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  44891823 tacattcatataataattcatcaatcatgaacatcatcatataacatcata 44891873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 24720467 - 24720394
Alignment:
Q  236 aacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||| ||| || |||| ||||||||| ||||||||||||||||||||||| | |||||||| ||||||||    
T  24720467 aacatcatattcatcaacatatacattcatataataattcatcaatcatgaacagcgtcatataatatcatatt 24720394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 260 - 309
Target Start/End: Complemental strand, 25262981 - 25262932
Alignment:
Q  260 attcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  25262981 attcatataataattcatcaatcatgaacaacatcatataacctcatatt 25262932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 260 - 309
Target Start/End: Original strand, 45496243 - 45496292
Alignment:
Q  260 attcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  45496243 attcatataataattcatcaatcatgaacaacatcttataacatcatatt 45496292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 50544020 - 50544077
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||| ||||||||| ||||| |||||||||||||||||||||||||||||| ||||||    
T  50544020 acatatacattcatataatacttcatcaatcatgaacaacatcatataacagcatatt 50544077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 17902549 - 17902497
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||| ||| ||||||||||| |||||||||||||||||||||||||||||||    
T  17902549 tacatccatataataattcataaatcatgaacaacatcatataacatcatatt 17902497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 303
Target Start/End: Original strand, 50544083 - 50544134
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacat 303  Q
    |||| ||||||||| ||||| |||||||||||||||||||||||||||||||    
T  50544083 acatatacattcatataatacttcatcaatcatgaacaacatcatataacat 50544134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 24720530 - 24720457
Alignment:
Q  236 aacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||| ||| || |||| ||||||||| ||||| |||||||||||||||||  |||||| |||||||||||    
T  24720530 aacatcatattcatcaacatatacattcatataatacttcatcaatcatgaacataatcatacaacatcatatt 24720457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 44891755 - 44891812
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||| ||||||||| ||||||||||||||||||| |||||||||||  ||||||||||    
T  44891755 acatatacattcatataataattcatcaatcatggacaacatcataggacatcatatt 44891812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 17902484 - 17902432
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||||  |||||||||||||| || ||||||||||||||||||||||||    
T  17902484 tacattcatacaataattcatcaataataaacaacatcatataacatcatatt 17902432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 17903839 - 17903787
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||| || |||||||| ||| |||||||||||||||||||||||||||    
T  17903839 tacattcatatagtaattcattaattatgaacaacatcatataacatcatatt 17903787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 6833209 - 6833254
Alignment:
Q  24 tcagagcatcaaaccctctgctttaaatgaatgattatacattcca 69  Q
    |||||||||||| |||||  ||||||||||||||||||||||||||    
T  6833209 tcagagcatcaagccctcaactttaaatgaatgattatacattcca 6833254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 293
Target Start/End: Complemental strand, 635903 - 635867
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacat 293  Q
    ||||||||| |||||||||||||||||||||||||||    
T  635903 tacattcatataataattcatcaatcatgaacaacat 635867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 14793944 - 14793892
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||| ||| ||||| |||||||||||||||||| ||||| ||||||||    
T  14793944 tacattcatataagaattcgtcaatcatgaacaacatcctataatatcatatt 14793892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 309
Target Start/End: Original strand, 23073193 - 23073233
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  23073193 ataaatcatcaatcataaacaacatcatataacatcatatt 23073233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 283
Target Start/End: Original strand, 50544163 - 50544240
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatca 283  Q
    ||||||||||||| |||||||   |||  ||||||||| ||| || |||| ||||||||| |||||||||||||||||    
T  50544163 ataattcatcaatcatgaacaacatcatataacatcatattcatcaacatatacattcatataataattcatcaatca 50544240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 221
Target Start/End: Complemental strand, 25263023 - 25262989
Alignment:
Q  187 gacgactttgcatcataataacataattcatcaat 221  Q
    |||||||||||||||||||| ||||||||||||||    
T  25263023 gacgactttgcatcataatatcataattcatcaat 25262989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Original strand, 1642908 - 1642945
Alignment:
Q  272 attcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  1642908 attcatcaatcataaacaatatcatataacatcatatt 1642945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 221
Target Start/End: Complemental strand, 17903876 - 17903843
Alignment:
Q  188 acgactttgcatcataataacataattcatcaat 221  Q
    ||||||||||||||||||| ||||||||||||||    
T  17903876 acgactttgcatcataatatcataattcatcaat 17903843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 297
Target Start/End: Original strand, 29298440 - 29298485
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcata 297  Q
    |||| ||||||||| || ||||||||||||||| ||||||||||||    
T  29298440 acatatacattcatatactaattcatcaatcataaacaacatcata 29298485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 221
Target Start/End: Original strand, 45496202 - 45496235
Alignment:
Q  188 acgactttgcatcataataacataattcatcaat 221  Q
    ||||||||||||||||||| ||||||||||||||    
T  45496202 acgactttgcatcataatatcataattcatcaat 45496235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 283
Target Start/End: Original strand, 6833555 - 6833603
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatca 283  Q
    ||||||||| ||| || |||| ||||||||| |||||||||||||||||    
T  6833555 taacatcatattcatcaacatatacattcatataataattcatcaatca 6833603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 11809328 - 11809288
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||| ||||||||| | ||||||||||||||||||||||||    
T  11809328 ataaatcatcaatcgtaaacaacatcatataacatcatatt 11809288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 14793290 - 14793250
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||||||| || ||||||||||| ||||||||||||    
T  14793290 ataattcatcaattataaacaacatcatgtaacatcatatt 14793250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 67; Significance: 9e-30; HSPs: 3)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 188 - 309
Target Start/End: Original strand, 27523 - 27647
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    ||||||||| ||||||||| ||||||||||||||||||||||   ||| |||||||||  ||  || |||| |||||||||  |||||||||||||||||    
T  27523 acgactttgaatcataatatcataattcatcaattatgaacaacatcatgtaacatcaaattaatcaacatatacattcataaaataattcatcaatcat 27622  T
Q  285 gaacaacatcatataacatcatatt 309  Q
    |||||||||||||||||||||||||    
T  27623 gaacaacatcatataacatcatatt 27647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 27307 - 27352
Alignment:
Q  25 cagagcatcaaaccctctgctttaa-atgaatgattatacattcca 69  Q
    ||||||||||| |||||| |||||| ||||||||||||||||||||    
T  27307 cagagcatcaagccctctactttaatatgaatgattatacattcca 27352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 310
Target Start/End: Original strand, 27544 - 27585
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatatta 310  Q
    ||||||||||||| |||||||||||||| |||||||| ||||    
T  27544 ataattcatcaattatgaacaacatcatgtaacatcaaatta 27585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 9e-30; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 188 - 309
Target Start/End: Original strand, 12622611 - 12622735
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    ||||||| ||||||||||| ||||||||||||||||||||||   ||| ||||| |||| ||| || |||| ||||||||| ||||||||||||||||||    
T  12622611 acgacttcgcatcataatatcataattcatcaattatgaacagcatcatgtaacgtcatattcatcaacatatacattcatataataattcatcaatcat 12622710  T
Q  285 gaacaacatcatataacatcatatt 309  Q
    |||||||||||||  ||||||||||    
T  12622711 gaacaacatcataggacatcatatt 12622735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 13164365 - 13164469
Alignment:
Q  208 cataattcatcaattatga---acatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatc 304  Q
    |||||||||||||| ||||   ||||||  ||||||||| ||| || |||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13164365 cataattcatcaatcatgatcaacatcatataacatcatattcatcaacatatacattcatataataattcatcaatcatgaacaacatcatataacatc 13164464  T
Q  305 atatt 309  Q
    |||||    
T  13164465 atatt 13164469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 10272747 - 10272851
Alignment:
Q  208 cataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatc 304  Q
    |||||||||||||| |||||||   |||  |||||||||  || || |||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10272747 cataattcatcaatgatgaacaacatcatataacatcataatcatcaacatatacattcatataataattcatcaatcatgaacaacatcatataacatc 10272846  T
Q  305 atatt 309  Q
    |||||    
T  10272847 atatt 10272851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 188 - 309
Target Start/End: Complemental strand, 45315160 - 45315037
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    |||||||  |||||||||| |||||| |||||||||||||||   ||| |||||||||| ||| || |||| | | ||||| ||||| ||||||||||||    
T  45315160 acgacttcacatcataatatcataat-catcaattatgaacaacatcatgtaacatcatattcatcaacatattccttcatctaatacttcatcaatcat 45315062  T
Q  285 gaacaacatcatataacatcatatt 309  Q
    |||||||||||||||||||||||||    
T  45315061 gaacaacatcatataacatcatatt 45315037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 188 - 309
Target Start/End: Original strand, 46740311 - 46740435
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    ||||||| ||||||| ||| ||||||||||||||||| ||||   |||  ||||||||| ||  || |||| ||| ||||| ||||| ||||||||||||    
T  46740311 acgacttcgcatcatgatatcataattcatcaattataaacaacatcatataacatcatatttatcaacatataccttcatataatacttcatcaatcat 46740410  T
Q  285 gaacaacatcatataacatcatatt 309  Q
    |||||||||||||||||||||||||    
T  46740411 gaacaacatcatataacatcatatt 46740435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 209 - 309
Target Start/End: Original strand, 14508010 - 14508113
Alignment:
Q  209 ataattcatcaattatgaacatcacg---taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatca 305  Q
    ||||||||||||| ||||||||||     ||| ||||| ||| || |||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  14508010 ataattcatcaatcatgaacatcatcatataaaatcatattcatcaacatatacattcatataataattcatcaatcatgaacaacatcatataacatca 14508109  T
Q  306 tatt 309  Q
    ||||    
T  14508110 tatt 14508113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 188 - 309
Target Start/End: Complemental strand, 19566806 - 19566682
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    ||||||| ||||||||||| ||||||||||||||||| ||||   ||| |||||||||| ||  || |||| ||| ||||| ||||| ||||||||||||    
T  19566806 acgacttcgcatcataatatcataattcatcaattataaacaacatcatgtaacatcatatttatcaacatatactttcatataatacttcatcaatcat 19566707  T
Q  285 gaacaacatcatataacatcatatt 309  Q
    |||||  |||||| |||||||||||    
T  19566706 gaacataatcatacaacatcatatt 19566682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 19566692 - 19566619
Alignment:
Q  236 aacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||| ||| || |||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  19566692 aacatcatattcatcaacatatacattcatataatacttcatcaatcatgaacaacatcatataacatcatatt 19566619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 40229646 - 40229727
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    |||||||  ||||||||| ||| |  |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  40229646 aacatcatataacatcatattcattaacatatacattcatataataattcatcaatcatgaacaacatcatataacatcata 40229727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 309
Target Start/End: Original strand, 26445149 - 26445232
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||  ||||||||| ||| |  |||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  26445149 aacatcatataacatcatattcattaacatatacattcatataataattcatcaatcatgaacaacatcatataacctcatatt 26445232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 309
Target Start/End: Original strand, 55582466 - 55582548
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||  ||||||||| ||| || |||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  55582466 aacatcatataacatcatattcatcaacatatacattcatataataat-catcaatcatgaacaacatcatataacatcatatt 55582548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 188 - 309
Target Start/End: Original strand, 14507800 - 14507924
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    ||||||| ||||||| ||| ||||||| ||||||||| ||||   ||| |||||||||| ||  || |||| | | ||||| ||||| ||||||||||||    
T  14507800 acgacttcgcatcatgatatcataattaatcaattataaacaacatcatgtaacatcatatttatcaacatattccttcatataatacttcatcaatcat 14507899  T
Q  285 gaacaacatcatataacatcatatt 309  Q
    ||||||||||||| |||||||||||    
T  14507900 gaacaacatcatacaacatcatatt 14507924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 235 - 309
Target Start/End: Original strand, 14629325 - 14629399
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||| ||| || |||| ||||||||| ||||||||||||||| |||||||||||||||||||| ||||||    
T  14629325 taacatcatattcatcaacatatacattcatataataattcatcaataatgaacaacatcatataacaacatatt 14629399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 15041900 - 15041830
Alignment:
Q  239 atcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||| ||| || |||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  15041900 atcatattcatcaacatatacattcatataataattcatcaatcatgaacaacattatataacatcatatt 15041830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 239 - 309
Target Start/End: Original strand, 15112524 - 15112594
Alignment:
Q  239 atcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||| ||| || |||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  15112524 atcatattcatcaacatatacattcatataataattcatcaatcatgaacaacattatataacatcatatt 15112594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 235 - 309
Target Start/End: Original strand, 25513016 - 25513090
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||| ||| ||| || |||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  25513016 taacaacatattcatcaacatatacattcatataataattcatcaatcataaacaacatcatataacatcatatt 25513090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 14507914 - 14507987
Alignment:
Q  236 aacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||| ||| || |||| ||||||||| |||||||||||| |||||||||| |||||||||||||||||||    
T  14507914 aacatcatattcatcaacatatacattcatataataattcatcgatcatgaacatcatcatataacatcatatt 14507987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 46740542 - 46740623
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    |||||||  |||||||||  || || |||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  46740542 aacatcatataacatcatactcatcaacatatacattcatataataattcatcaatcatgaacaacatcatataatatcata 46740623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 309
Target Start/End: Original strand, 9923517 - 9923586
Alignment:
Q  238 catcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||| ||| || |||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  9923517 catcatattcatcaacatatacattcat--aataattcatcaatcatgaacaacatcatataacatcatatt 9923586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 226 - 309
Target Start/End: Original strand, 46740415 - 46740499
Alignment:
Q  226 aacatcacgtaacatcat-tttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||  ||||||||| |||| || |||| ||||||||| |||||||||||||||||||||||||||||||  ||||||||||    
T  46740415 aacatcatataacatcatatttcatcaacatatacattcatataataattcatcaatcatgaacaacatcataggacatcatatt 46740499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 252 - 307
Target Start/End: Original strand, 26013493 - 26013548
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    |||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  26013493 acatttacattcatataataattcatcaaccatgaacaacatcatataacatcata 26013548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 252 - 307
Target Start/End: Original strand, 46740505 - 46740560
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    |||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  46740505 acatatacattcatataatacttcatcaatcatgaacaacatcatataacatcata 46740560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 11479315 - 11479273
Alignment:
Q  267 taataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  11479315 taataattcatcaatcatgaacaacatcatataacatcatatt 11479273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 12622746 - 12622796
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  12622746 tacattcatataataattcatcaatcatgaacagcatcatataacatcata 12622796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 309
Target Start/End: Original strand, 14507976 - 14508050
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||| ||| || |||| || |||||| ||||||||||||||||||||||| |||||||||| ||||||||    
T  14507976 taacatcatattcatcaacatatatattcatataataattcatcaatcatgaacatcatcatataaaatcatatt 14508050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 257 - 307
Target Start/End: Complemental strand, 44024281 - 44024231
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  44024281 tacattcatataataattcatcagtcatgaacaacatcatataacatcata 44024231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 13164524 - 13164581
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||| ||||||||| ||||||||||||||||||||||||| |||||| ||||||||||    
T  13164524 acatatacattcatataataattcatcaatcatgaacaacgtcatatgacatcatatt 13164581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 188 - 303
Target Start/End: Complemental strand, 2425444 - 2425326
Alignment:
Q  188 acgactttgcatcataataacataattcatcaatt---atgaacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    ||||||| ||||||||||| ||||| |||||||||   |  ||||||| |||||||||| ||  || |||| ||| ||||| ||||| ||||||||||||    
T  2425444 acgacttcgcatcataatatcataactcatcaattctaaacaacatcatgtaacatcatatttatcaacatatactttcatataatacttcatcaatcat 2425345  T
Q  285 gaacaacatcatataacat 303  Q
    ||| ||||||||| |||||    
T  2425344 gaaaaacatcatacaacat 2425326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 269 - 309
Target Start/End: Original strand, 9621669 - 9621709
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  9621669 ataattcatcaatcatgaacaacatcatataacatcatatt 9621709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 35660145 - 35660197
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||||  |||||||||||||| |||||||||||||||||||||||||||    
T  35660145 tacattcatacaataattcatcaataatgaacaacatcatataacatcatatt 35660197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 295
Target Start/End: Complemental strand, 44024796 - 44024736
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatca 295  Q
    ||||||||| |||||| |||| ||||||||| ||||||||||||||| |||||||||||||    
T  44024796 taacatcatattcttcaacatatacattcatataataattcatcaataatgaacaacatca 44024736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 307
Target Start/End: Original strand, 14629460 - 14629515
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    |||| ||||||||| ||||| |||||||||||| ||||||||||||||||||||||    
T  14629460 acatatacattcatataatacttcatcaatcataaacaacatcatataacatcata 14629515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 298
Target Start/End: Original strand, 35660047 - 35660110
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatat 298  Q
    ||||||||| ||| || |||| ||||||||| ||||||||||||||| ||||||||||||||||    
T  35660047 taacatcatattcatcaacatatacattcatataataattcatcaataatgaacaacatcatat 35660110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 252 - 298
Target Start/End: Original strand, 25512940 - 25512986
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatat 298  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||    
T  25512940 acatatacattcatataataattcatcaatcatgaacaacatcatat 25512986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 252 - 298
Target Start/End: Complemental strand, 26922500 - 26922454
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatat 298  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||    
T  26922500 acatatacattcatataataattcatcaatcatgaacaacatcatat 26922454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 284
Target Start/End: Original strand, 9621668 - 9621747
Alignment:
Q  208 cataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    |||||||||||||| |||||||   |||  ||||||||| ||| || |||| ||||||||||||||||||||||||||||    
T  9621668 cataattcatcaatcatgaacaacatcatataacatcatattcatcaacatatacattcatgtaataattcatcaatcat 9621747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 26445112 - 26445169
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||| ||||||| | ||||||||||| |||||||| ||||||||||||||||||||||    
T  26445112 acatatacattcgtataataattcataaatcatgatcaacatcatataacatcatatt 26445169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 257 - 298
Target Start/End: Original strand, 13164588 - 13164629
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatat 298  Q
    ||||||||| |||||||||||||||||||||||| |||||||    
T  13164588 tacattcatataataattcatcaatcatgaacaatatcatat 13164629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 44024349 - 44024292
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||| ||||||||| |||||| |||||||||||||||||||||| |  ||||||||||    
T  44024349 acatatacattcatataataagtcatcaatcatgaacaacatcacaggacatcatatt 44024292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 9923546 - 9923624
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    ||||||||||||| |||||||   |||  ||||||||| ||| || |||| ||||||||| ||||||||||||||||||    
T  9923546 ataattcatcaatcatgaacaacatcatataacatcatattcatcaacatatacattcatataataattcatcaatcat 9923624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 303
Target Start/End: Original strand, 10272868 - 10272904
Alignment:
Q  267 taataattcatcaatcatgaacaacatcatataacat 303  Q
    ||||||||||||||||| |||||||||||||||||||    
T  10272868 taataattcatcaatcaggaacaacatcatataacat 10272904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 303
Target Start/End: Complemental strand, 26922387 - 26922351
Alignment:
Q  267 taataattcatcaatcatgaacaacatcatataacat 303  Q
    |||||||| ||||||||||||||||||||||||||||    
T  26922387 taataatttatcaatcatgaacaacatcatataacat 26922351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 35660109 - 35660145
Alignment:
Q  272 attcatcaatcatgaacaacatcatataacatcatat 308  Q
    |||||||||||||||||||||||||||||| ||||||    
T  35660109 attcatcaatcatgaacaacatcatataacttcatat 35660145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 283
Target Start/End: Original strand, 35660157 - 35660234
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatca 283  Q
    ||||||||||||| |||||||   |||  ||||||||| ||| || |||| ||||||||| |||||||||||||||||    
T  35660157 ataattcatcaataatgaacaacatcatataacatcatattcatcaacatatacattcatataataattcatcaatca 35660234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 46225410 - 46225368
Alignment:
Q  267 taataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||| ||||||||||||||||||||| | |||||||||    
T  46225410 taataattcttcaatcatgaacaacatcataaatcatcatatt 46225368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 284
Target Start/End: Original strand, 55582528 - 55582586
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    |||||||  ||||||||| ||| || |||| ||||||||| ||||||||||||||||||    
T  55582528 aacatcatataacatcatattcatcaacatatacattcatataataattcatcaatcat 55582586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 46225376 - 46225319
Alignment:
Q  238 catcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatca 295  Q
    |||||| ||| || |||| ||||||||| ||||||||||| |||||| ||||||||||    
T  46225376 catcatattcatcaacatatacattcatataataattcattaatcattaacaacatca 46225319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 284
Target Start/End: Complemental strand, 11479313 - 11479235
Alignment:
Q  209 ataattcatcaattatg---aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    ||||||||||||| |||   |||||||  ||||||||| ||| || |||| ||||||||| |||||||||| |||||||    
T  11479313 ataattcatcaatcatgaacaacatcatataacatcatattcatcaacatatacattcatataataattcaacaatcat 11479235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 220
Target Start/End: Original strand, 25512708 - 25512740
Alignment:
Q  188 acgactttgcatcataataacataattcatcaa 220  Q
    ||||||||||||||||||| |||||||||||||    
T  25512708 acgactttgcatcataatatcataattcatcaa 25512740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 309
Target Start/End: Original strand, 40229626 - 40229666
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||||| ||| | ||||||||||||||||||||||||    
T  40229626 ataattcatcgatcgtaaacaacatcatataacatcatatt 40229666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 44024529 - 44024489
Alignment:
Q  29 gcatcaaaccctctgctttaaatgaatgattatacattcca 69  Q
    ||||||||||| |  ||||||||||||||||||||||||||    
T  44024529 gcatcaaacccccaactttaaatgaatgattatacattcca 44024489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 45315341 - 45315285
Alignment:
Q  14 attataaatttcagagcatcaaaccctctgctttaa-atgaatgattatacattcca 69  Q
    |||||| ||| ||||||||||| |||||  |||||| ||||||||||||||||||||    
T  45315341 attatacattccagagcatcaagccctcaactttaatatgaatgattatacattcca 45315285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 220
Target Start/End: Original strand, 55582410 - 55582442
Alignment:
Q  188 acgactttgcatcataataacataattcatcaa 220  Q
    ||||||||||||||||||| |||||||||||||    
T  55582410 acgactttgcatcataatatcataattcatcaa 55582442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 62; Significance: 9e-27; HSPs: 4)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 209 - 309
Target Start/End: Complemental strand, 36365 - 36262
Alignment:
Q  209 ataattcatcaattatgaacatcacg---taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatca 305  Q
    ||||||||||||| ||||||||||     ||||||||| |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  36365 ataattcatcaatcatgaacatcatcatataacatcatattcttcaacatatacattcatataataattcatcaatcatgaacaacatcatataacatca 36266  T
Q  306 tatt 309  Q
    ||||    
T  36265 tatt 36262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 36382 - 36325
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  36382 acatatacattcatataataattcatcaatcatgaacatcatcatataacatcatatt 36325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 299
Target Start/End: Complemental strand, 36302 - 36209
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatata 299  Q
    ||||||||||||| |||||||   |||  ||||||||| ||| || |||| | ||||||| |||||||||||||||||||||||||| ||||||    
T  36302 ataattcatcaatcatgaacaacatcatataacatcatattcatcaacatatgcattcatataataattcatcaatcatgaacaacaacatata 36209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 269 - 308
Target Start/End: Complemental strand, 36430 - 36391
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatat 308  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  36430 ataattcatcaattatgaacaacatcatataacatcatat 36391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 60; Significance: 1e-25; HSPs: 7)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 188 - 310
Target Start/End: Complemental strand, 66958 - 66833
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    ||||||| ||||||||||| ||||||||||||||||||||||   |||  ||||||||| |||  | |||| ||||| ||| ||||||||||||  ||||    
T  66958 acgacttcgcatcataatatcataattcatcaattatgaacaagatcatctaacatcatattcaccaacatatacatccatataataattcatctttcat 66859  T
Q  285 gaacaacatcatataacatcatatta 310  Q
    ||||||||||||||||||||||||||    
T  66858 gaacaacatcatataacatcatatta 66833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 66810 - 66737
Alignment:
Q  236 aacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||| ||| || |||| ||||||||| ||||||||||||| ||||||||||||||||||||| |||||||    
T  66810 aacatcatattcatcaacatatacattcatataataattcatcattcatgaacaacatcatataacttcatatt 66737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 261 - 307
Target Start/End: Original strand, 74767 - 74813
Alignment:
Q  261 ttcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  74767 ttcatataataattcatcaatcatgaacaacatcatataacatcata 74813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 67232 - 67177
Alignment:
Q  14 attataaatttcagagcatcaaaccctctgctttaaatgaatgattatacattcca 69  Q
    |||||| ||| ||||||||||| |||||| ||||| ||||||||||||||||||||    
T  67232 attatacattccagagcatcaatccctctactttatatgaatgattatacattcca 67177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 67275 - 67220
Alignment:
Q  14 attataaatttcagagcatcaaaccctctgctttaaatgaatgattatacattcca 69  Q
    |||||| ||||||||||||||| || ||  ||||||||||||||||||||||||||    
T  67275 attatacatttcagagcatcaagccatcaactttaaatgaatgattatacattcca 67220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 67189 - 67131
Alignment:
Q  14 attataaatttcagagcatcaaaccctctgctttaa--atgaatgattatacattccaa 70  Q
    |||||| ||| ||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  67189 attatacattccagagcatcaagccctctactttaaatatgaatgattatacattccaa 67131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Original strand, 65300 - 65346
Alignment:
Q  261 ttcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    ||||| ||||||||||||||| | ||||||| |||||||||||||||    
T  65300 ttcatataataattcatcaataacgaacaacgtcatataacatcata 65346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 209 - 309
Target Start/End: Complemental strand, 7397 - 7294
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatca 305  Q
    ||||||||||||| |||||||   |||  ||||||||| ||| || |||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  7397 ataattcatcaatcatgaacaacatcatataacatcatattcatcaacatatacattcatataataattcatcaatcatgaacaacatcatataacatca 7298  T
Q  306 tatt 309  Q
    ||||    
T  7297 tatt 7294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 7427 - 7357
Alignment:
Q  239 atcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||| ||| || |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  7427 atcatattcatcaacatatacattcatataataattcatcaatcatgaacaacatcatataacatcatatt 7357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 297
Target Start/End: Original strand, 61966 - 62070
Alignment:
Q  196 gcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaaca 292  Q
    |||| |||||| |||||||||| |||||||||||   ||| |||||||||| ||| || |||| ||||||||| ||||||||||||||||||||||||||    
T  61966 gcattataatatcataattcattaattatgaacaacatcatgtaacatcatattcatcaacatatacattcatataataattcatcaatcatgaacaaca 62065  T
Q  293 tcata 297  Q
    |||||    
T  62066 tcata 62070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 62093 - 62143
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  62093 tacattcatataataattcatcaatcatgaacgacatcatataacatcata 62143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 309
Target Start/End: Original strand, 61979 - 62019
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||| ||| |||||||||||||| ||||||||||||    
T  61979 ataattcattaattatgaacaacatcatgtaacatcatatt 62019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 188 - 309
Target Start/End: Complemental strand, 62975 - 62851
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    ||||||||||||||||||| ||||||||||||||||| ||||   ||| |||||||||| ||  || |||| ||| ||||| ||||| |||||||||| |    
T  62975 acgactttgcatcataatatcataattcatcaattataaacaacatcatgtaacatcatatttatcaacatataccttcatataatacttcatcaatcgt 62876  T
Q  285 gaacaacatcatataacatcatatt 309  Q
    |||||||||||||  ||||||||||    
T  62875 gaacaacatcataagacatcatatt 62851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 190 - 309
Target Start/End: Complemental strand, 252 - 130
Alignment:
Q  190 gactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatga 286  Q
    ||||||||||||||||| ||||||| ||||||||| ||||   ||| |||||||||| ||  || |||| ||| ||||| ||||| ||||||||||||||    
T  252 gactttgcatcataatatcataattaatcaattataaacaccatcatgtaacatcatatttatcaacatataccttcatataatatttcatcaatcatga 153  T
Q  287 acaacatcatataacatcatatt 309  Q
    |||||||||||  ||||||||||    
T  152 acaacatcataagacatcatatt 130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 124 - 67
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||| ||||||||| ||||||||| ||||||| ||||||||||||| | |||||||||    
T  124 acatatacattcatataataattcgtcaatcaagaacaacatcataaatcatcatatt 67  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 53; Significance: 2e-21; HSPs: 4)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 196 - 299
Target Start/End: Original strand, 18296 - 18402
Alignment:
Q  196 gcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaaca 292  Q
    ||||||||||| ||||||||||||||||| ||||   ||| |||||||||||||| || |||| ||| ||||| ||||| |||| |||||||||||||||    
T  18296 gcatcataatatcataattcatcaattataaacaacatcatgtaacatcattttcatcaacatataccttcatataatacttcagcaatcatgaacaaca 18395  T
Q  293 tcatata 299  Q
    |||||||    
T  18396 tcatata 18402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 18474 - 18516
Alignment:
Q  267 taataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  18474 taataattcatcaatcatgaacaacatcatataacatcatatt 18516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 283
Target Start/End: Original strand, 18476 - 18553
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatca 283  Q
    ||||||||||||| |||||||   |||  ||||||||| ||| || |||| ||||||||| |||||||||||||||||    
T  18476 ataattcatcaatcatgaacaacatcatataacatcatattcatcaacatatacattcatataataattcatcaatca 18553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 304
Target Start/End: Original strand, 18428 - 18470
Alignment:
Q  262 tcatgtaataattcatcaatcatgaacaacatcatataacatc 304  Q
    |||| ||||||||||||||||| ||||||||| ||||||||||    
T  18428 tcatataataattcatcaatcacgaacaacatgatataacatc 18470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 235 - 307
Target Start/End: Complemental strand, 24766 - 24694
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    ||||||||| ||| || |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  24766 taacatcatattcatcaacatatacattcatataataattcatcaatcatgaacaacatcatataacatcata 24694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 209 - 307
Target Start/End: Complemental strand, 24732 - 24631
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatca 305  Q
    ||||||||||||| |||||||   |||  |||||||||  || || |||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  24732 ataattcatcaatcatgaacaacatcatataacatcatactcatcaacatatacattcatataataattcatcaatcatgaacaacatcatataacatca 24633  T
Q  306 ta 307  Q
    ||    
T  24632 ta 24631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1354 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold1354
Description:

Target: scaffold1354; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 503 - 399
Alignment:
Q  208 cataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatc 304  Q
    |||||||||||||| |||||||   |||  ||||||||| ||| || |||| ||| ||||  ||||||||||||||||||||||||||||||||||||||    
T  503 cataattcatcaatcatgaacaacatcatataacatcatattcatcaacatatactttcaaataataattcatcaatcatgaacaacatcatataacatc 404  T
Q  305 atatt 309  Q
    |||||    
T  403 atatt 399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 51; Significance: 3e-20; HSPs: 3)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 235 - 309
Target Start/End: Original strand, 174 - 248
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||| ||| || |||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  174 taacatcatattcatcaacatatacattcatataataattcatcaataatgaacaacatcatataacatcatatt 248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 307
Target Start/End: Original strand, 345 - 400
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    |||| ||||||||| ||||| |||||||||||| ||||||||||||||||||||||    
T  345 acatatacattcatataatacttcatcaatcataaacaacatcatataacatcata 400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 309
Target Start/End: Original strand, 246 - 284
Alignment:
Q  272 attcatca-atcatgaacaacatcatataacatcatatt 309  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  246 attcatcacatcatgaacaacatcatataacatcatatt 284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 309
Target Start/End: Original strand, 3139 - 3209
Alignment:
Q  239 atcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||| ||| || |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  3139 atcatattcatcaacatatacattcatataataattcatcaatcatgaacaacatcatataacatcatatt 3209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 190 - 307
Target Start/End: Original strand, 56281 - 56401
Alignment:
Q  190 gactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatga 286  Q
    ||||| ||||||||||| ||||||| ||||||||| ||||   ||| ||||||||||  || || | || ||||||||| ||||||||||||||||||||    
T  56281 gacttcgcatcataatatcataattaatcaattataaacaacatcatgtaacatcatagtcatcaatatatacattcatataataattcatcaatcatga 56380  T
Q  287 acaacatcatataacatcata 307  Q
    | |||||||| ||||||||||    
T  56381 ataacatcatgtaacatcata 56401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 51; Significance: 3e-20; HSPs: 3)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 309
Target Start/End: Original strand, 142764 - 142834
Alignment:
Q  239 atcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||| ||| || |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  142764 atcatattcatcaacatatacattcatataataattcatcaatcatgaacaacatcatataacatcatatt 142834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 309
Target Start/End: Original strand, 142794 - 142897
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatca 305  Q
    ||||||||||||| |||||||   |||  ||||||||| ||| || |||| ||||||||| ||||||||| |||| ||||||||||||||||||||||||    
T  142794 ataattcatcaatcatgaacaacatcatataacatcatattcatcaacatatacattcatataataattcctcaaccatgaacaacatcatataacatca 142893  T
Q  306 tatt 309  Q
    ||||    
T  142894 tatt 142897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 309
Target Start/End: Original strand, 142877 - 142960
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||  ||||||||| ||| || |||| |||||| || |||||||||||||| ||||||||||||||||||||||||||||    
T  142877 aacatcatataacatcatattcatcaacatatacattaatataataattcatcaaccatgaacaacatcatataacatcatatt 142960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 235 - 309
Target Start/End: Original strand, 40305 - 40379
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||| ||| || |||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  40305 taacatcatattcatcaacatatacattcatataataattcatcaataatgaacaacatcatataacatcatatt 40379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 309
Target Start/End: Original strand, 40377 - 40414
Alignment:
Q  272 attcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||||||||||||||||||||||||||||||||    
T  40377 attcatcaatcatgaacaacatcatataacatcatatt 40414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 190 - 298
Target Start/End: Original strand, 16178 - 16288
Alignment:
Q  190 gactttgcatcataataacataattcatcaattatgaa----catcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatg 285  Q
    ||||| |||| |||||| ||||||||||||||||||||    ||||| |||||||||| ||| || |||| ||||||||| |||  ||||||||||||||    
T  16178 gacttcgcattataatatcataattcatcaattatgaatcaacatcatgtaacatcatattcatcaacatatacattcatataa--attcatcaatcatg 16275  T
Q  286 aacaacatcatat 298  Q
    |||||||||||||    
T  16276 aacaacatcatat 16288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 49; Significance: 5e-19; HSPs: 3)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 309
Target Start/End: Complemental strand, 65804 - 65694
Alignment:
Q  202 taataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatat 298  Q
    ||||| ||||||||||||||| |||| |   ||| |||||||||| ||| || | || ||||||||| ||||||||||||||||||||| |||||||| |    
T  65804 taataccataattcatcaattttgaaaaatatcatgtaacatcatattcatcaatatatacattcatataataattcatcaatcatgaataacatcatgt 65705  T
Q  299 aacatcatatt 309  Q
    |||||||||||    
T  65704 aacatcatatt 65694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 298
Target Start/End: Complemental strand, 65734 - 65642
Alignment:
Q  209 ataattcatcaattatgaa---catcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatat 298  Q
    ||||||||||||| |||||   ||||| |||||||||| ||| || |||| ||||||||  |||||||||||||||||||||||  |||||||    
T  65734 ataattcatcaatcatgaataacatcatgtaacatcatattcatcaacatatacattcaaataataattcatcaatcatgaacagtatcatat 65642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 307
Target Start/End: Complemental strand, 66376 - 66337
Alignment:
Q  268 aataattcatcaatcatgaacaacatcatataacatcata 307  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  66376 aataattcatcaataatgaacaacatcatataacaacata 66337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 2609 - 2539
Alignment:
Q  239 atcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||| ||| || |||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  2609 atcatattcatcaacatatacattcatataataattcatcaatcatgaacaacatcatatagcatcatatt 2539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 188 - 309
Target Start/End: Complemental strand, 19055 - 18931
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattat---gaacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    ||||||||||||||||||| |||||||||||||||||    ||||||| | |||||||| ||  || |||| ||| ||||| ||||| ||||| |||| |    
T  19055 acgactttgcatcataatatcataattcatcaattataaacaacatcatgcaacatcatatttatcaacatataccttcatataatacttcattaatcgt 18956  T
Q  285 gaacaacatcatataacatcatatt 309  Q
    |||||||||||||  ||||||||||    
T  18955 gaacaacatcataagacatcatatt 18931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 235 - 309
Target Start/End: Complemental strand, 188058 - 187984
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||| ||| || |||| ||||||||| ||||||||||||||| |||||||||||||||||||| ||||||    
T  188058 taacatcatattcatcaacatatacattcatataataattcatcaataatgaacaacatcatataacaacatatt 187984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 307
Target Start/End: Complemental strand, 187923 - 187868
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    |||| ||||||||| ||||| |||||||||||| ||||||||||||||||||||||    
T  187923 acatatacattcatataatacttcatcaatcataaacaacatcatataacatcata 187868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 46; Significance: 3e-17; HSPs: 6)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 260 - 309
Target Start/End: Original strand, 1919 - 1968
Alignment:
Q  260 attcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  1919 attcatataataattcatcaatcatgaacaacatcatataacatcatatt 1968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 268 - 309
Target Start/End: Original strand, 3947 - 3988
Alignment:
Q  268 aataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  3947 aataattcatcaatcatgaacaacatcatataacatcatatt 3988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 288
Target Start/End: Original strand, 1928 - 2010
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaac 288  Q
    ||||||||||||| |||||||   |||  ||||||||| ||| || |||| ||||||||| |||||||||||||| |||||||    
T  1928 ataattcatcaatcatgaacaacatcatataacatcatattcgtcaacatatacattcatataataattcatcaaccatgaac 2010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 288
Target Start/End: Original strand, 3948 - 4030
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaac 288  Q
    ||||||||||||| |||||||   |||  ||||||||| ||| || |||| ||||||||| |||||||||||||| |||||||    
T  3948 ataattcatcaatcatgaacaacatcatataacatcatattcgtcaacatatacattcatataataattcatcaaccatgaac 4030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 221
Target Start/End: Original strand, 1878 - 1911
Alignment:
Q  188 acgactttgcatcataataacataattcatcaat 221  Q
    ||||||||||||||||||| ||||||||||||||    
T  1878 acgactttgcatcataatatcataattcatcaat 1911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 221
Target Start/End: Original strand, 3898 - 3931
Alignment:
Q  188 acgactttgcatcataataacataattcatcaat 221  Q
    ||||||||||||||||||| ||||||||||||||    
T  3898 acgactttgcatcataatatcataattcatcaat 3931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 187 - 295
Target Start/End: Original strand, 9933 - 10044
Alignment:
Q  187 gacgactttgcatcataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatca 283  Q
    |||||| ||||||||||||| ||||||||||| ||  | ||||   |||  ||||||||| ||| || |||| ||||||||| |||||||||||||||||    
T  9933 gacgacgttgcatcataatatcataattcatcgatcgtaaacaacatcatataacatcatattcatcaacatatacattcatataataattcatcaatca 10032  T
Q  284 tgaacaacatca 295  Q
    ||||||||||||    
T  10033 tgaacaacatca 10044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 309
Target Start/End: Original strand, 9955 - 9995
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||||| ||| | ||||||||||||||||||||||||    
T  9955 ataattcatcgatcgtaaacaacatcatataacatcatatt 9995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 33816 - 33873
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  33816 acatatacattcatataataattcatcaataatgaacaacatcatataacatcatatt 33873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 33886 - 33936
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||| ||||    
T  33886 tacattcatataataattcatcaataatgaacaacatcatataacaacata 33936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 46; Significance: 3e-17; HSPs: 5)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 7629 - 7548
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    |||||||  ||||||||| ||| || |||| ||||||||| ||||||||||| |||||||| ||||||||||||||||||||    
T  7629 aacatcatataacatcatattcatcaacatatacattcatataataattcataaatcatgatcaacatcatataacatcata 7548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 7666 - 7609
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  7666 acatatacattcatataataattcataaatcatgaacaacatcatataacatcatatt 7609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 226 - 309
Target Start/End: Complemental strand, 7566 - 7482
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatat-aacatcatatt 309  Q
    |||||||  |||||||||  || || |||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  7566 aacatcatataacatcatactcatcaacatatacattcatataataattcatcaatcatgaacaacatcatataaacatcatatt 7482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 221
Target Start/End: Complemental strand, 7761 - 7728
Alignment:
Q  188 acgactttgcatcataataacataattcatcaat 221  Q
    ||||||||||||||||||| ||||||||||||||    
T  7761 acgactttgcatcataatatcataattcatcaat 7728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 7724 - 7672
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||| || |||||||| ||| ||||||||||||| || ||||||||||    
T  7724 tacattcatatagtaattcattaattatgaacaacatcaaattacatcatatt 7672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 235 - 307
Target Start/End: Complemental strand, 7293 - 7221
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    ||||||||| ||| || |||| ||||||||| ||||| |||||||||||||||||||||||||||| ||||||    
T  7293 taacatcatattcatcaacatatacattcatctaatacttcatcaatcatgaacaacatcatataaaatcata 7221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 45; Significance: 1e-16; HSPs: 5)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 309
Target Start/End: Complemental strand, 18570 - 18468
Alignment:
Q  210 taattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcat 306  Q
    |||||||| |||||||||||   |||  ||||||||| ||  || |||| ||||||||| ||||||||||| |||||| |||||||||||||||||||||    
T  18570 taattcattaattatgaacaacatcatataacatcatatttatcaacatatacattcatataataattcataaatcattaacaacatcatataacatcat 18471  T
Q  307 att 309  Q
    |||    
T  18470 att 18468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 309
Target Start/End: Complemental strand, 18425 - 18342
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||  |||||||||  || || |||| ||||||||| |||| |||||||||||||||||||||||||||||||| |||||    
T  18425 aacatcatataacatcatactcatcaacatatacattcatataattattcatcaatcatgaacaacatcatataacattatatt 18342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 18488 - 18407
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    |||||||  ||||||||| ||| || |||| ||||||||| ||||||||||| |||||| | ||||||||||||||||||||    
T  18488 aacatcatataacatcatattcatcaacatatacattcatataataattcataaatcataatcaacatcatataacatcata 18407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 18362 - 18281
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    |||||||  |||||| || ||| || |||| ||| ||||| ||||| |||||||||||||||||||| ||||||||||||||    
T  18362 aacatcatataacattatattcatcaacatatactttcatataatacttcatcaatcatgaacaacagcatataacatcata 18281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 18583 - 18531
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||| || |||||||| ||| |||||||||||||||||||||||||||    
T  18583 tacattcatatagtaattcattaattatgaacaacatcatataacatcatatt 18531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 45; Significance: 1e-16; HSPs: 4)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 7606 - 7554
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  7606 tacatccatataataattcatcaatcatgaacaacatcatataacatcatatt 7554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 7861 - 7807
Alignment:
Q  14 attataaatttcagagcatcaaaccctctgctttaa-atgaatgattatacattc 67  Q
    |||||| ||| ||||||||||| |||||| |||||| ||||||||||||||||||    
T  7861 attatatattccagagcatcaagccctctactttaatatgaatgattatacattc 7807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 7949 - 7892
Alignment:
Q  14 attataaatttcagagcatcaaaccctctgctttaa-atgaatgattatacattccaa 70  Q
    |||||| ||| ||||||||||| |||||| |||||| |||||||||||| ||||||||    
T  7949 attatacattccagagcatcaagccctctactttaatatgaatgattattcattccaa 7892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 7982 - 7937
Alignment:
Q  24 tcagagcatcaaaccctctgctttaaatgaatgattatacattcca 69  Q
    |||||||||||| |||||  ||| ||||||||||||||||||||||    
T  7982 tcagagcatcaatccctcaacttgaaatgaatgattatacattcca 7937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 239 - 307
Target Start/End: Original strand, 7612 - 7680
Alignment:
Q  239 atcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    ||||| ||| || |||| ||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  7612 atcatattcatcaacatatacattcgtataataattcatcaatcatgaacaacatcatataacatcata 7680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 239 - 307
Target Start/End: Original strand, 14731 - 14799
Alignment:
Q  239 atcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    ||||| ||| || |||| ||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  14731 atcatattcatcaacatatacattcgtataataattcatcaatcatgaacaacatcatataacatcata 14799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1539 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold1539
Description:

Target: scaffold1539; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 309
Target Start/End: Original strand, 1171 - 1254
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||  ||||||||| ||| || |||| ||||||||| |||||||||||||| ||| ||||||| ||||||||||||||||    
T  1171 aacatcatataacatcatattcatcaacatatacattcatataataattcatcaaccataaacaacagcatataacatcatatt 1254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1539; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 309
Target Start/End: Original strand, 1121 - 1191
Alignment:
Q  239 atcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||| ||| || |||| || |||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  1121 atcatattcatcaacatatagattcatataataattcatcagtcatgaacaacatcatataacatcatatt 1191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 8135 - 8244
Alignment:
Q  201 ataataacataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcata 297  Q
    |||||| ||||||||||||||||| ||||   ||| ||||||||||  || || | || ||||||||| ||||||| ||||||||||||| ||||||||     
T  8135 ataatatcataattcatcaattataaacaacatcatgtaacatcatagtcatcaatatatacattcatataataatacatcaatcatgaaaaacatcatg 8234  T
Q  298 taacatcata 307  Q
    ||||||||||    
T  8235 taacatcata 8244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 7906 - 7946
Alignment:
Q  29 gcatcaaaccctctgctttaaatgaatgattatacattcca 69  Q
    ||||||||||| |  ||||||||||||||||||||||||||    
T  7906 gcatcaaacccccaactttaaatgaatgattatacattcca 7946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 1052 - 1094
Alignment:
Q  267 taataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  1052 taataattcatcaatcatgaacaacatcatataacatcatatt 1094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 1054 - 1132
Alignment:
Q  209 ataattcatcaattatgaaca---tcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    ||||||||||||| |||||||   |||  ||||||||| ||| || |||| ||||||||| ||||||||||||||||||    
T  1054 ataattcatcaatcatgaacaacatcatataacatcatattcatcaacatatacattcatataataattcatcaatcat 1132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 309
Target Start/End: Complemental strand, 5398 - 5329
Alignment:
Q  238 catcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||| ||| || |||| |||||||||  |||||||||||||||| |||||||||||||||||||||||||    
T  5398 catcatattcatcaacatatacattcat--aataattcatcaatcaagaacaacatcatataacatcatatt 5329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 284
Target Start/End: Complemental strand, 5349 - 5291
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    |||||||  ||||||||| ||| || |||| ||||||||| ||||||||||||||||||    
T  5349 aacatcatataacatcatattcatcaacatatacattcatttaataattcatcaatcat 5291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 4)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 269 - 309
Target Start/End: Original strand, 15840 - 15880
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  15840 ataattcatcaatcatgaacaacatcatataacatcatatt 15880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 15379 - 15424
Alignment:
Q  24 tcagagcatcaaaccctctgctttaaatgaatgattatacattcca 69  Q
    |||||||||||| |||||  ||||| ||||||||||||||||||||    
T  15379 tcagagcatcaagccctcaactttatatgaatgattatacattcca 15424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 15587 - 15644
Alignment:
Q  13 aattataaatttcagagcatcaaaccctctgctttaa-atgaatgattatacattcca 69  Q
    ||||||| ||| ||||||||||| |||||| |||||| ||||||||||||||| ||||    
T  15587 aattatacattccagagcatcaagccctctactttaatatgaatgattatacaatcca 15644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 15643 - 15688
Alignment:
Q  25 cagagcatcaaaccctctgctttaa-atgaatgattatacattcca 69  Q
    ||||||||||| |||||| |||||| ||||||||||||||||||||    
T  15643 cagagcatcaagccctctactttaatatgaatgattatacattcca 15688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 239 - 299
Target Start/End: Original strand, 29383 - 29443
Alignment:
Q  239 atcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatata 299  Q
    ||||| ||| || |||| ||||||||| |||||||||||||||||||||||||||||||||    
T  29383 atcatattcatcaacatatacattcatataataattcatcaatcatgaacaacatcatata 29443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 4)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 298
Target Start/End: Complemental strand, 641 - 578
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatat 298  Q
    ||||||||| ||| || |||| ||||||||| ||||||||||||||| ||||||||||||||||    
T  641 taacatcatattcatcaacatatacattcatataataattcatcaataatgaacaacatcatat 578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 579 - 542
Alignment:
Q  272 attcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||||||||||||||||||||||||||||||||    
T  579 attcatcaatcatgaacaacatcatataacatcatatt 542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 529 - 477
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||||  |||||||||||||| |||||||||||||||||||| ||||||    
T  529 tacattcatacaataattcatcaataatgaacaacatcatataacaacatatt 477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 307
Target Start/End: Complemental strand, 479 - 444
Alignment:
Q  272 attcatcaatcatgaacaacatcatataacatcata 307  Q
    ||||||||||||| ||||||||||||||||||||||    
T  479 attcatcaatcataaacaacatcatataacatcata 444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 307
Target Start/End: Complemental strand, 7274 - 7219
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    |||| ||||||||| ||| |||||||||||||||||||||||| ||||||||||||    
T  7274 acatatacattcatataacaattcatcaatcatgaacaacatcgtataacatcata 7219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 252 - 306
Target Start/End: Complemental strand, 7211 - 7157
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcat 306  Q
    |||| ||||||||| ||| |||||||||||||||||||||||| |||||||||||    
T  7211 acatatacattcatataacaattcatcaatcatgaacaacatcgtataacatcat 7157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 299
Target Start/End: Original strand, 29848 - 29895
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatata 299  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||    
T  29848 acatatacattcatataataattcatcaatcatgaacaacatcatata 29895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 252 - 306
Target Start/End: Original strand, 8252 - 8306
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcat 306  Q
    |||| ||||||||| ||| |||||||||||||||||||||||| |||||||||||    
T  8252 acatatacattcatataacaattcatcaatcatgaacaacatcgtataacatcat 8306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 310
Target Start/End: Original strand, 8175 - 8247
Alignment:
Q  238 catcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatta 310  Q
    |||||| ||| || |||| |||||| || ||| |||||||||||| ||||||||||| |||||||||||||||    
T  8175 catcatattcatcaacatatacatttatataacaattcatcaatcgtgaacaacatcgtataacatcatatta 8247  T

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Target: scaffold1160 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold1160
Description:

Target: scaffold1160; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 309
Target Start/End: Original strand, 1 - 49
Alignment:
Q  260 attcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  1 attcatataataat-catcaatcatgaacaacatcatataacatcatatt 49  T

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Target: scaffold1160; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 29 - 110
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    |||||||  ||||||||| ||| || |||| ||||||||| |||||||||||| ||||||| || ||||||| |||||||||    
T  29 aacatcatataacatcatattcatcaacatatacattcatataataattcatctatcatgagcatcatcatacaacatcata 110  T

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Target: scaffold0371 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 284
Target Start/End: Complemental strand, 11170 - 11071
Alignment:
Q  188 acgactttgcatcataataacataattcatcaattatg---aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcat 284  Q
    |||||||||||||||||||  ||||||||||||| |||   ||| |||  ||||||||| ||| || |||| |||||| || ||||||||||||||||||    
T  11170 acgactttgcatcataatataataattcatcaatcatgaccaacgtcatataacatcatattcatcaacatctacatttatataataattcatcaatcat 11071  T

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Target: scaffold0371; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 11151 - 11109
Alignment:
Q  267 taataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||||||||||||||| |||| |||||||||||||||||    
T  11151 taataattcatcaatcatgaccaacgtcatataacatcatatt 11109  T

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Target: scaffold0121 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 309
Target Start/End: Original strand, 19365 - 19414
Alignment:
Q  260 attcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||| ||||||||||||||||||||||||||||||| | |||||||||    
T  19365 attcatataataattcatcaatcatgaacaacatcataaatcatcatatt 19414  T

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Target: scaffold0026 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 20567 - 20624
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||| ||||||||| ||||||||||| |||||||||||| ||||| ||||||||||||    
T  20567 acatatacattcatataataattcataaatcatgaacaaaatcatgtaacatcatatt 20624  T

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Target: scaffold0026; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 23669 - 23726
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||| ||||||||| ||| ||||||| ||||||||| |||||||  ||||||||||||    
T  23669 acatatacattcatataacaattcataaatcatgaataacatcaagtaacatcatatt 23726  T

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Target: scaffold0628 (Bit Score: 37; Significance: 0.000000000007; HSPs: 4)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 4364 - 4312
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||| || |||||||| ||| |||||||||||||||||||||||||||    
T  4364 tacattcatatagtaattcattaattatgaacaacatcatataacatcatatt 4312  T

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Target: scaffold0628; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 8924 - 8872
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||| || |||||||| ||| |||||||||||||||||||||||||||    
T  8924 tacattcatatagtaattcattaattatgaacaacatcatataacatcatatt 8872  T

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Target: scaffold0628; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 221
Target Start/End: Complemental strand, 4401 - 4368
Alignment:
Q  188 acgactttgcatcataataacataattcatcaat 221  Q
    ||||||||||||||||||| ||||||||||||||    
T  4401 acgactttgcatcataatatcataattcatcaat 4368  T

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Target: scaffold0628; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 221
Target Start/End: Complemental strand, 8961 - 8928
Alignment:
Q  188 acgactttgcatcataataacataattcatcaat 221  Q
    ||||||||||||||||||| ||||||||||||||    
T  8961 acgactttgcatcataatatcataattcatcaat 8928  T

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Target: scaffold0174 (Bit Score: 37; Significance: 0.000000000007; HSPs: 7)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 235 - 307
Target Start/End: Original strand, 15365 - 15437
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcata 307  Q
    ||||||||| ||| || |||| ||||||||| |||||||||||| || || ||| ||||||||||||||||||    
T  15365 taacatcatattcatcaacatatacattcatataataattcatcgattataaacgacatcatataacatcata 15437  T

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Target: scaffold0174; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 15316 - 15375
Alignment:
Q  239 atcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatat 298  Q
    ||||| ||| ||||||| ||||||||  ||||||||||||||||||||| ||||||||||    
T  15316 atcatattcatcgacatatacattcaaataataattcatcaatcatgaataacatcatat 15375  T

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Target: scaffold0174; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 307
Target Start/End: Original strand, 4317 - 4357
Alignment:
Q  267 taataattcatcaatcatgaacaacatcatataacatcata 307  Q
    |||||||||||||||||||||||  ||||||||||||||||    
T  4317 taataattcatcaatcatgaacacaatcatataacatcata 4357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 307
Target Start/End: Original strand, 10439 - 10479
Alignment:
Q  267 taataattcatcaatcatgaacaacatcatataacatcata 307  Q
    |||||||||||||||||||||||  ||||||||||||||||    
T  10439 taataattcatcaatcatgaacacaatcatataacatcata 10479  T

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Target: scaffold0174; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 15054 - 15110
Alignment:
Q  14 attataaatttcagagcatcaaaccctctgctttaa-atgaatgattatacattcca 69  Q
    |||||| ||| |||||||||||||||||  |||||| ||||||||||||||||||||    
T  15054 attatacattccagagcatcaaaccctcaactttaatatgaatgattatacattcca 15110  T

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Target: scaffold0174; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 298
Target Start/End: Original strand, 15284 - 15322
Alignment:
Q  260 attcatgtaataattcatcaatcatgaacaacatcatat 298  Q
    |||||| |||||||||||||||||||||||| |||||||    
T  15284 attcatataataattcatcaatcatgaacaatatcatat 15322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 15010 - 15066
Alignment:
Q  14 attataaatttcagagcatcaaaccctctgctttaa-atgaatgattatacattcca 69  Q
    |||||| ||| ||||||||||| |||||  |||||| ||||||||||||||||||||    
T  15010 attatacattccagagcatcaagccctcaactttaatatgaatgattatacattcca 15066  T

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Target: scaffold0035 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 39944 - 39904
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  39944 ataattcatcagtcatgaacaacatcatataacatcatatt 39904  T

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Target: scaffold0035; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 44599 - 44559
Alignment:
Q  269 ataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||||||||||||| ||||| |||| ||||||||||    
T  44599 ataattcatcaatcatgaataacattatatgacatcatatt 44559  T

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Target: scaffold0045 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 294
Target Start/End: Complemental strand, 46716 - 46657
Alignment:
Q  235 taacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatc 294  Q
    |||||| || ||| || |||| ||||||||| ||||||||||||||||||||||||||||    
T  46716 taacatgatattcatcaacatatacattcatataataattcatcaatcatgaacaacatc 46657  T

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Target: scaffold0645 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: scaffold0645
Description:

Target: scaffold0645; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 298
Target Start/End: Complemental strand, 531 - 491
Alignment:
Q  258 acattcatgtaataattcatcaatcatgaacaacatcatat 298  Q
    |||||||| ||||||||||||||| ||||||||||||||||    
T  531 acattcatataataattcatcaataatgaacaacatcatat 491  T

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Target: scaffold0645; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 492 - 455
Alignment:
Q  272 attcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  492 attcatcaatcataaacaacatcatataacattatatt 455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0645; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 309
Target Start/End: Complemental strand, 585 - 544
Alignment:
Q  268 aataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||||||||||||| |||||||||||||||  ||||||||||    
T  585 aataattcatcaataatgaacaacatcataatacatcatatt 544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 7953 - 8005
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||| || |||||||| ||| | |||||||||||||||||||||||||    
T  7953 tacattcatatagtaattcattaattacgaacaacatcatataacatcatatt 8005  T

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Target: scaffold0577; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 221
Target Start/End: Original strand, 7915 - 7949
Alignment:
Q  187 gacgactttgcatcataataacataattcatcaat 221  Q
    |||||||||||||||||||| ||||||||||||||    
T  7915 gacgactttgcatcataatatcataattcatcaat 7949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 567 - 515
Alignment:
Q  257 tacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    ||||||||| ||| ||||| |||||||||||||||||| ||||| ||||||||    
T  567 tacattcatataagaattcctcaatcatgaacaacatcctataatatcatatt 515  T

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Target: scaffold0369 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 295
Target Start/End: Complemental strand, 16748 - 16689
Alignment:
Q  236 aacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatca 295  Q
    |||||||| ||| || |||| || |||||| |||||||||||||||| ||||||||||||    
T  16748 aacatcatattcatcaacatataaattcatataataattcatcaatcttgaacaacatca 16689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 6098 - 6044
Alignment:
Q  239 atcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacat 293  Q
    ||||| ||| || |||| ||||||||| |||||| ||||||||||||||||||||    
T  6098 atcatattcatcaacatatacattcatataataaatcatcaatcatgaacaacat 6044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 13437 - 13383
Alignment:
Q  239 atcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacat 293  Q
    ||||| ||| || |||| ||||||||| |||||| ||||||||||||||||||||    
T  13437 atcatattcatcaacatatacattcatataataaatcatcaatcatgaacaacat 13383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1098 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1098
Description:

Target: scaffold1098; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 853 - 910
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacatcatataacatcatatt 309  Q
    |||| ||||||||| ||| ||||||| ||||||||| |||||||  ||||||||||||    
T  853 acatatacattcatataacaattcataaatcatgaataacatcaagtaacatcatatt 910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 293
Target Start/End: Original strand, 120203 - 120244
Alignment:
Q  252 acatgtacattcatgtaataattcatcaatcatgaacaacat 293  Q
    |||| ||||||||| |||||| ||||||||||||||||||||    
T  120203 acatatacattcatataataaatcatcaatcatgaacaacat 120244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 3266 - 3194
Alignment:
Q  226 aacatcacgtaacatcattttcttcgacatgtacattcatgtaataattcatcaatcatgaacaacatcatat 298  Q
    |||||||  ||||||| | ||| || || ||||||||||  |||||||||| |||||||||||||| ||||||    
T  3266 aacatcatataacatcgtattcatcaacctgtacattcacataataattcaacaatcatgaacaacgtcatat 3194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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