View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10233A_low_99 (Length: 308)
Name: NF10233A_low_99
Description: NF10233A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10233A_low_99 |
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Alignment Details
Target: chr5 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 4395467 - 4395404
Alignment:
| Q |
92 |
tgagatgaaccaaaacaattatttgtnnnnnnnctatatgtattgaaactacaccacaaaacctt |
156 |
Q |
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| T |
4395467 |
tgagatgaaccaaaacaattatttgtaaaaaa-ctatatgtattgaaactacaccacaaaacctt |
4395404 |
T |
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