View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10234_high_2 (Length: 375)
Name: NF10234_high_2
Description: NF10234
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10234_high_2 |
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Alignment Details
Target: chr2 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 17 - 345
Target Start/End: Original strand, 15760799 - 15761133
Alignment:
| Q |
17 |
aatatgtaaccaacaagtccaattttgggagttgaagttcgcgatcctttttgttcttgcgtctgagacaagaggacacggcaaagcaaggatgtcatgt |
116 |
Q |
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| T |
15760799 |
aatatgtaaccaacaagtccaattttgggagttgaagttcgcgatcctttttgttcttgcgtctgagacaagaggacacagcaaagcaaggatgtcatgt |
15760898 |
T |
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| Q |
117 |
cgacaaagttagttttaacagaacgagtggatgatggatgtgagaagagatgcatgatgtaaggagtgagtatgaaagatattacattacgcaggcaaag |
216 |
Q |
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| T |
15760899 |
caacaaagttagttgtaacagaacgagtggatgatggatgtgaggagagatgcatgatgtaaggagtgagtatgaaagatattacattacgcaggcaaag |
15760998 |
T |
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| Q |
217 |
gaagaaagttatgatatgaatgagtcaattccctttttgatannnnnnnnnctatattccatt------ttctggagagttctgtttatattcttcacgt |
310 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||||||||| |||||||||||| |
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| T |
15760999 |
gaagaaagttatgatatgaatgagtcaaatccctttttgatatttctttttctatcttccattttattcttctggagagttctgtttctattcttcacgt |
15761098 |
T |
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| Q |
311 |
gcctttaaacccataatgtattgtacgtgtgtgtg |
345 |
Q |
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| T |
15761099 |
gcttttaatcccctaatgtattgtacgtgtgtgtg |
15761133 |
T |
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