View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10234_low_22 (Length: 247)

Name: NF10234_low_22
Description: NF10234
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10234_low_22
NF10234_low_22
[»] chr1 (5 HSPs)
chr1 (6-247)||(8753646-8753885)
chr1 (179-235)||(48715040-48715096)
chr1 (20-78)||(8732836-8732894)
chr1 (179-238)||(27793798-27793858)
chr1 (20-78)||(8718048-8718106)
[»] scaffold0321 (1 HSPs)
scaffold0321 (179-238)||(17990-18049)
[»] chr6 (7 HSPs)
chr6 (179-238)||(12877771-12877830)
chr6 (179-234)||(15951562-15951617)
chr6 (179-234)||(3836107-3836163)
chr6 (179-238)||(14579019-14579078)
chr6 (194-238)||(21183027-21183071)
chr6 (179-211)||(2936638-2936670)
chr6 (179-234)||(16712895-16712948)
[»] chr4 (8 HSPs)
chr4 (179-234)||(31768249-31768304)
chr4 (179-238)||(6664383-6664443)
chr4 (179-238)||(580597-580656)
chr4 (179-238)||(6685798-6685855)
chr4 (179-238)||(6660793-6660852)
chr4 (183-237)||(6682347-6682399)
chr4 (179-238)||(13250954-13251013)
chr4 (179-238)||(26947487-26947546)
[»] chr2 (7 HSPs)
chr2 (179-234)||(80483-80538)
chr2 (179-238)||(13438151-13438210)
chr2 (179-238)||(1234346-1234404)
chr2 (179-238)||(10938461-10938519)
chr2 (179-238)||(10941818-10941876)
chr2 (179-238)||(10944323-10944381)
chr2 (179-238)||(10947687-10947745)
[»] chr7 (2 HSPs)
chr7 (188-238)||(24509999-24510049)
chr7 (183-238)||(37006285-37006339)
[»] chr3 (1 HSPs)
chr3 (179-235)||(6240622-6240678)
[»] scaffold0933 (1 HSPs)
scaffold0933 (183-238)||(1546-1601)
[»] scaffold0019 (1 HSPs)
scaffold0019 (179-238)||(174091-174150)
[»] chr8 (4 HSPs)
chr8 (179-238)||(24681390-24681449)
chr8 (180-237)||(38059154-38059211)
chr8 (179-235)||(29260378-29260432)
chr8 (179-235)||(29275405-29275462)
[»] chr5 (1 HSPs)
chr5 (179-240)||(1354199-1354260)


Alignment Details
Target: chr1 (Bit Score: 227; Significance: 1e-125; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 6 - 247
Target Start/End: Complemental strand, 8753885 - 8753646
Alignment:
Q  6 acaatatataatgtattgtagtccaccaaaagggtattattgttgtcattgacttggctacaagaaagctagaatttatcaacatttgtgttaccctgat 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8753885 acaatatataatgtattgtagtccaccaaaagggtattattgttgtcattgacttggctacaagaaagctagaatttatcaacatttgtgttaccctgat 8753786  T
Q  106 tcactctaataataacgatgtattataaagcagtatgaagcaattgaaaaaagagtcgatgttgttgtaaatttttcaaaagtttcaaatattttgtgtc 205  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  8753785 tcactctaataataacgatgtat--taaagcagtatgaagcaattgaaaaaagagttgatgttgttgtaaatttttcaaaagtttcaaatattttgtgtc 8753688  T
Q  206 ccatatatttaattgagaaatatagaaaaatatcttattcct 247  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  8753687 ccatatatttaattgagaaatatagaaaaatatcttattcct 8753646  T

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Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 48715096 - 48715040
Alignment:
Q  179 tttcaaaagtttcaaatattttgtgtcccatatatttaattgagaaatatagaaaaa 235  Q
    |||||||||||||||||| ||||||| |||||| || ||||||||||||||||||||    
T  48715096 tttcaaaagtttcaaataatttgtgttccatattttcaattgagaaatatagaaaaa 48715040  T

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Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 8732894 - 8732836
Alignment:
Q  20 attgtagtccaccaaaagggtattattgttgtcattgacttggctacaagaaagctaga 78  Q
    |||||||||| | |||||||||||||||| ||||| |||||| ||||||| ||||||||    
T  8732894 attgtagtcctcaaaaagggtattattgtagtcatggacttgtctacaaggaagctaga 8732836  T

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Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 27793858 - 27793798
Alignment:
Q  179 tttcaaaagtttcaaatattttgtgtcccata-tatttaattgagaaatatagaaaaatat 238  Q
    |||||||||||| ||||||||||||| ||||| | ||||||| |||||||||| |||||||    
T  27793858 tttcaaaagttttaaatattttgtgttccatattttttaattaagaaatataggaaaatat 27793798  T

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Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 8718106 - 8718048
Alignment:
Q  20 attgtagtccaccaaaagggtattattgttgtcattgacttggctacaagaaagctaga 78  Q
    |||||||||||| ||| ||| |||||||| ||||| |||||| ||||||| ||||||||    
T  8718106 attgtagtccacaaaatggggattattgtagtcatggacttgtctacaaggaagctaga 8718048  T

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Target: scaffold0321 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 179 - 238
Target Start/End: Original strand, 17990 - 18049
Alignment:
Q  179 tttcaaaagtttcaaatattttgtgtcccatatatttaattgagaaatatagaaaaatat 238  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  17990 tttcaaaagtttcaaatattttgtgtcccatatttttaattgagaaatatagaaaaatat 18049  T

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Target: chr6 (Bit Score: 56; Significance: 3e-23; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 12877830 - 12877771
Alignment:
Q  179 tttcaaaagtttcaaatattttgtgtcccatatatttaattgagaaatatagaaaaatat 238  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12877830 tttcaaaagtttcaaatattttgtgtcccatatttttaattgagaaatatagaaaaatat 12877771  T

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Target: chr6; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 15951562 - 15951617
Alignment:
Q  179 tttcaaaagtttcaaatattttgtgtcccatatatttaattgagaaatatagaaaa 234  Q
    |||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||    
T  15951562 tttcaaaagttttaaataatttgtgtcccatatttttaattgagaaatatagaaaa 15951617  T

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Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 3836163 - 3836107
Alignment:
Q  179 tttcaaaagtttcaaatatttt-gtgtcccatatatttaattgagaaatatagaaaa 234  Q
    |||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||    
T  3836163 tttcaaaagtttcaaatatttttgtgttccatatttttaattgagaaatatagaaaa 3836107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 179 - 238
Target Start/End: Original strand, 14579019 - 14579078
Alignment:
Q  179 tttcaaaagtttcaaatattttgtgtcccatatatttaattgagaaatatagaaaaatat 238  Q
    |||||||||||||||||||||| | | | |||| ||||||||||||||||||||||||||    
T  14579019 tttcaaaagtttcaaatattttatattctatatttttaattgagaaatatagaaaaatat 14579078  T

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Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 238
Target Start/End: Complemental strand, 21183071 - 21183027
Alignment:
Q  194 atattttgtgtcccatatatttaattgagaaatatagaaaaatat 238  Q
    ||||||||||| |||||| || |||||||||||||||||||||||    
T  21183071 atattttgtgttccatattttcaattgagaaatatagaaaaatat 21183027  T

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Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 211
Target Start/End: Complemental strand, 2936670 - 2936638
Alignment:
Q  179 tttcaaaagtttcaaatattttgtgtcccatat 211  Q
    |||||||| ||||||||||||||||||||||||    
T  2936670 tttcaaaaatttcaaatattttgtgtcccatat 2936638  T

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Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 16712948 - 16712895
Alignment:
Q  179 tttcaaaagtttcaaatattttgtgtcccatatatttaattgagaaatatagaaaa 234  Q
    |||||||||||| |||||||  ||||||||||  |||||| |||||||||||||||    
T  16712948 tttcaaaagttttaaatatt--gtgtcccataattttaatagagaaatatagaaaa 16712895  T

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Target: chr4 (Bit Score: 52; Significance: 6e-21; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 31768304 - 31768249
Alignment:
Q  179 tttcaaaagtttcaaatattttgtgtcccatatatttaattgagaaatatagaaaa 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  31768304 tttcaaaagtttcaaatattttgtgtcccatatttttaattgagaaatatagaaaa 31768249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 6664443 - 6664383
Alignment:
Q  179 tttcaaaagtttcaaatattttgtgtcccata-tatttaattgagaaatatagaaaaatat 238  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  6664443 tttcaaaagtttcaaatattttgtgtcccatattttttaattgagaaatatagaaaaatat 6664383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 580656 - 580597
Alignment:
Q  179 tttcaaaagtttcaaatattttgtgtcccatatatttaattgagaaatatagaaaaatat 238  Q
    |||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||    
T  580656 tttcaaaagttttaaatattttgtgtcccatattttcaattgagaaatatagaaaaatat 580597  T

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Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 179 - 238
Target Start/End: Original strand, 6685798 - 6685855
Alignment:
Q  179 tttcaaaagtttcaaatattttgtgtcccatatatttaattgagaaatatagaaaaatat 238  Q
    ||||||||||||||||||||||||  ||||||| ||||||||||||||||| ||||||||    
T  6685798 tttcaaaagtttcaaatattttgt--cccatatttttaattgagaaatataaaaaaatat 6685855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 6660852 - 6660793
Alignment:
Q  179 tttcaaaagtttcaaatattttgtgtcccatatattt--aattgagaaatatagaaaaatat 238  Q
    ||||||||||||||||||||  ||||||||||| |||  |||||||||||||||||||||||    
T  6660852 tttcaaaagtttcaaatatt--gtgtcccatatttttttaattgagaaatatagaaaaatat 6660793  T

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Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 237
Target Start/End: Original strand, 6682347 - 6682399
Alignment:
Q  183 aaaagtttcaaatattttgtgtcccatatatttaattgagaaatatagaaaaata 237  Q
    ||||||||||||||||||||  || |||| |||||||||||||||||||||||||    
T  6682347 aaaagtttcaaatattttgt--cctatatttttaattgagaaatatagaaaaata 6682399  T

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Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 13251013 - 13250954
Alignment:
Q  179 tttcaaaagtttcaaatattttgtgtcccatatatttaattgagaaatatagaaaaatat 238  Q
    |||||||||||||||||||||| |||||||||| || |||||| | |||| |||||||||    
T  13251013 tttcaaaagtttcaaatattttatgtcccatattttcaattgaaatatatcgaaaaatat 13250954  T

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Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 238
Target Start/End: Original strand, 26947487 - 26947546
Alignment:
Q  179 tttcaaaagtttcaaatattttgtgtcccatatatttaattgagaaatatagaaaaatat 238  Q
    |||||||||| | |||||||||||||||||||| || |||||||||||||  ||||||||    
T  26947487 tttcaaaagtctaaaatattttgtgtcccatattttcaattgagaaatatctaaaaatat 26947546  T

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Target: chr2 (Bit Score: 52; Significance: 6e-21; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 80483 - 80538
Alignment:
Q  179 tttcaaaagtttcaaatattttgtgtcccatatatttaattgagaaatatagaaaa 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  80483 tttcaaaagtttcaaatattttgtgtcccatatttttaattgagaaatatagaaaa 80538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 13438210 - 13438151
Alignment:
Q  179 tttcaaaagtttcaaatattttgtgtcccatatatttaattgagaaatatagaaaaatat 238  Q
    ||||||||||||  |||||||||||||||| || || |||||||||||||||||||||||    
T  13438210 tttcaaaagttttgaatattttgtgtcccacattttcaattgagaaatatagaaaaatat 13438151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 238
Target Start/End: Original strand, 1234346 - 1234404
Alignment:
Q  179 tttcaaaagtttcaaatattttgtgtcccatatatttaattgagaaatatagaaaaatat 238  Q
    ||||||||||| ||| ||||||||||| ||||| ||  ||||||||||||||||||||||    
T  1234346 tttcaaaagtt-caattattttgtgtctcatattttctattgagaaatatagaaaaatat 1234404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 10938519 - 10938461
Alignment:
Q  179 tttcaaaagtttcaaatattttgtgtcccatatatttaattgagaaatatagaaaaatat 238  Q
    ||||||||||| ||| ||||||||||| ||||| ||  ||||||||||||||||||||||    
T  10938519 tttcaaaagtt-caattattttgtgtctcatattttctattgagaaatatagaaaaatat 10938461  T

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Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 10941876 - 10941818
Alignment:
Q  179 tttcaaaagtttcaaatattttgtgtcccatatatttaattgagaaatatagaaaaatat 238  Q
    ||||||||||| ||| ||||||||||| ||||| ||  ||||||||||||||||||||||    
T  10941876 tttcaaaagtt-caattattttgtgtctcatattttctattgagaaatatagaaaaatat 10941818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 10944381 - 10944323
Alignment:
Q  179 tttcaaaagtttcaaatattttgtgtcccatatatttaattgagaaatatagaaaaatat 238  Q
    ||||||||||| ||| ||||||||||| ||||| ||  ||||||||||||||||||||||    
T  10944381 tttcaaaagtt-caattattttgtgtctcatattttctattgagaaatatagaaaaatat 10944323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 10947745 - 10947687
Alignment:
Q  179 tttcaaaagtttcaaatattttgtgtcccatatatttaattgagaaatatagaaaaatat 238  Q
    ||||||||||| ||| ||||||||||| ||||| ||  ||||||||||||||||||||||    
T  10947745 tttcaaaagtt-caattattttgtgtctcatattttctattgagaaatatagaaaaatat 10947687  T

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Target: chr7 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 188 - 238
Target Start/End: Complemental strand, 24510049 - 24509999
Alignment:
Q  188 tttcaaatattttgtgtcccatatatttaattgagaaatatagaaaaatat 238  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  24510049 tttcaaatattttgtgtcctatatttttaattgagaaatatagaaaaatat 24509999  T

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Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 183 - 238
Target Start/End: Original strand, 37006285 - 37006339
Alignment:
Q  183 aaaagtttcaaatattttgtgtcccatatatttaattgagaaatatagaaaaatat 238  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||    
T  37006285 aaaagtttcaaatattttgtgtcccatatttttaatttagaaatat-gaaaaatat 37006339  T

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Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 6240678 - 6240622
Alignment:
Q  179 tttcaaaagtttcaaatattttgtgtcccatatatttaattgagaaatatagaaaaa 235  Q
    |||||||||||| ||||||||||||||| |||| ||||||||||||||||| |||||    
T  6240678 tttcaaaagttttaaatattttgtgtcctatatttttaattgagaaatatataaaaa 6240622  T

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Target: scaffold0933 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0933
Description:

Target: scaffold0933; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 183 - 238
Target Start/End: Complemental strand, 1601 - 1546
Alignment:
Q  183 aaaagtttcaaatattttgtgtcccatatatttaattgagaaatatagaaaaatat 238  Q
    |||||||||||||||||||||||||||||  | ||||||||||||| |||||||||    
T  1601 aaaagtttcaaatattttgtgtcccatattatcaattgagaaatatcgaaaaatat 1546  T

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Target: scaffold0019 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 179 - 238
Target Start/End: Original strand, 174091 - 174150
Alignment:
Q  179 tttcaaaagtttcaaatattttgtgtcccatatatttaattgagaaatatagaaaaatat 238  Q
    ||||||||||||||||||||||||||| ||||  || ||||||||||||| |||||||||    
T  174091 tttcaaaagtttcaaatattttgtgtctcatactttcaattgagaaatatcgaaaaatat 174150  T

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Target: chr8 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 24681449 - 24681390
Alignment:
Q  179 tttcaaaagtttcaaatattttgtgtcccatatatttaattgagaaatatagaaaaatat 238  Q
    ||||||||||| |||||||||||||||  | || ||||||||||||||||||||||||||    
T  24681449 tttcaaaagttacaaatattttgtgtcttagatttttaattgagaaatatagaaaaatat 24681390  T

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Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 38059154 - 38059211
Alignment:
Q  180 ttcaaaagtttcaaatattttgtgtcccatatatttaattgagaaatatagaaaaata 237  Q
    ||||||||||| |||||||||||||| |||   |||||||||||||||||||||||||    
T  38059154 ttcaaaagttttaaatattttgtgtcacattattttaattgagaaatatagaaaaata 38059211  T

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Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 29260378 - 29260432
Alignment:
Q  179 tttcaaaagtttcaaatattttgtgtcccatatatttaattgagaaatatagaaaaa 235  Q
    |||||||||||||||||||||| |  ||||||| ||||||||||||||||| |||||    
T  29260378 tttcaaaagtttcaaatatttttt--cccatatttttaattgagaaatataaaaaaa 29260432  T

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Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 29275405 - 29275462
Alignment:
Q  179 tttcaaaagtttcaaatattttgt-gtcccatatatttaattgagaaatatagaaaaa 235  Q
    |||||||||||||||| ||||| | ||| ||||| ||||||||||||||||| |||||    
T  29275405 tttcaaaagtttcaaacatttttttgtctcatatttttaattgagaaatataaaaaaa 29275462  T

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Target: chr5 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 240
Target Start/End: Complemental strand, 1354260 - 1354199
Alignment:
Q  179 tttcaaaagtttcaaatattttgtgtcccatatatttaattgagaaatatagaaaaatatct 240  Q
    |||||||||||| |||||  ||||||| ||||| ||||||||||||||||||||||| ||||    
T  1354260 tttcaaaagttttaaataccttgtgtctcatatttttaattgagaaatatagaaaaaaatct 1354199  T

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