View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10234_low_3 (Length: 418)

Name: NF10234_low_3
Description: NF10234
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10234_low_3
NF10234_low_3
[»] chr3 (16 HSPs)
chr3 (316-406)||(13621991-13622082)
chr3 (322-406)||(49380987-49381072)
chr3 (322-402)||(13620918-13620999)
chr3 (322-397)||(49379699-49379775)
chr3 (192-295)||(48083382-48083485)
chr3 (213-286)||(20336536-20336609)
chr3 (214-285)||(20288104-20288175)
chr3 (191-286)||(20314621-20314716)
chr3 (191-286)||(36175426-36175521)
chr3 (214-306)||(14745080-14745172)
chr3 (208-306)||(20335392-20335488)
chr3 (226-306)||(35371052-35371132)
chr3 (269-306)||(12107913-12107950)
chr3 (208-283)||(20313545-20313618)
chr3 (158-205)||(24487143-24487191)
chr3 (270-306)||(27841645-27841681)
[»] chr7 (17 HSPs)
chr7 (321-406)||(41329503-41329589)
chr7 (322-402)||(41328217-41328298)
chr7 (322-402)||(39981315-39981396)
chr7 (208-283)||(11344671-11344746)
chr7 (321-406)||(32653460-32653546)
chr7 (340-406)||(35296851-35296918)
chr7 (214-306)||(35295843-35295935)
chr7 (323-374)||(32653733-32653784)
chr7 (208-266)||(45455247-45455305)
chr7 (178-306)||(40811465-40811593)
chr7 (250-306)||(43460738-43460794)
chr7 (322-403)||(669424-669506)
chr7 (269-307)||(44372872-44372910)
chr7 (269-307)||(44381728-44381766)
chr7 (274-307)||(22115104-22115137)
chr7 (269-306)||(32255135-32255172)
chr7 (274-307)||(40509674-40509707)
[»] chr4 (18 HSPs)
chr4 (324-406)||(36243519-36243602)
chr4 (322-403)||(8363425-8363507)
chr4 (322-406)||(26495120-26495205)
chr4 (322-402)||(26496346-26496427)
chr4 (322-406)||(56156933-56157018)
chr4 (322-388)||(20625556-20625622)
chr4 (322-402)||(52137424-52137505)
chr4 (321-388)||(20620136-20620203)
chr4 (322-403)||(56157532-56157614)
chr4 (322-406)||(36244800-36244885)
chr4 (204-286)||(42871258-42871340)
chr4 (321-402)||(52138832-52138913)
chr4 (250-306)||(1794557-1794613)
chr4 (250-306)||(15449990-15450046)
chr4 (250-306)||(52240022-52240078)
chr4 (186-306)||(56085491-56085610)
chr4 (274-306)||(13165639-13165671)
chr4 (250-306)||(27850853-27850909)
[»] chr1 (14 HSPs)
chr1 (317-406)||(14479548-14479638)
chr1 (316-402)||(51445582-51445669)
chr1 (319-402)||(14478261-14478345)
chr1 (322-406)||(28050319-28050404)
chr1 (322-406)||(28051640-28051725)
chr1 (323-406)||(51446876-51446960)
chr1 (186-286)||(42244795-42244894)
chr1 (338-403)||(40533640-40533706)
chr1 (322-389)||(12667326-12667393)
chr1 (322-403)||(26287820-26287902)
chr1 (269-306)||(16965060-16965097)
chr1 (273-306)||(51300199-51300232)
chr1 (321-400)||(5611723-5611803)
chr1 (274-306)||(41873911-41873943)
[»] scaffold0114 (1 HSPs)
scaffold0114 (321-406)||(38537-38623)
[»] chr8 (9 HSPs)
chr8 (322-402)||(9854916-9854997)
chr8 (213-286)||(26697712-26697785)
chr8 (229-306)||(9854774-9854851)
chr8 (321-403)||(28291292-28291375)
chr8 (322-388)||(9853565-9853631)
chr8 (269-307)||(20180609-20180647)
chr8 (269-306)||(24192598-24192635)
chr8 (250-306)||(32798447-32798503)
chr8 (254-306)||(42098708-42098760)
[»] chr2 (11 HSPs)
chr2 (322-406)||(28610020-28610105)
chr2 (322-402)||(4921095-4921176)
chr2 (319-406)||(4919822-4919910)
chr2 (322-402)||(28611289-28611370)
chr2 (325-388)||(8321295-8321358)
chr2 (347-400)||(45699523-45699577)
chr2 (324-403)||(19398836-19398916)
chr2 (338-403)||(19397544-19397610)
chr2 (250-303)||(34513469-34513522)
chr2 (250-303)||(43033228-43033281)
chr2 (250-306)||(32469294-32469350)
[»] chr5 (10 HSPs)
chr5 (322-403)||(11796567-11796649)
chr5 (321-388)||(23325909-23325976)
chr5 (322-388)||(23334019-23334085)
chr5 (322-403)||(11797569-11797651)
chr5 (228-306)||(11262537-11262615)
chr5 (269-306)||(1009329-1009366)
chr5 (269-306)||(30910887-30910924)
chr5 (250-306)||(22047878-22047934)
chr5 (250-306)||(27705231-27705287)
chr5 (250-306)||(30859086-30859142)
[»] scaffold0219 (2 HSPs)
scaffold0219 (322-400)||(6893-6972)
scaffold0219 (322-403)||(8226-8308)
[»] chr6 (4 HSPs)
chr6 (321-402)||(11722783-11722865)
chr6 (191-306)||(15728874-15728989)
chr6 (227-286)||(5077766-5077825)
chr6 (269-306)||(17837761-17837798)
[»] scaffold0128 (1 HSPs)
scaffold0128 (233-306)||(22124-22197)
[»] scaffold2071 (1 HSPs)
scaffold2071 (250-305)||(597-652)
[»] scaffold0118 (1 HSPs)
scaffold0118 (250-306)||(43489-43545)
[»] scaffold0077 (1 HSPs)
scaffold0077 (250-306)||(54099-54155)


Alignment Details
Target: chr3 (Bit Score: 76; Significance: 5e-35; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 316 - 406
Target Start/End: Complemental strand, 13622082 - 13621991
Alignment:
Q  316 attaatggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaa-tcacattttggtcccctt 406  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  13622082 attaatggcttaattggacatttggtcccctaaataattatgagtttacattttggtcctataaattgtaaaactcacattttggtcccctt 13621991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 322 - 406
Target Start/End: Complemental strand, 49381072 - 49380987
Alignment:
Q  322 ggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaa-tcacattttggtcccctt 406  Q
    |||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||| |||||    
T  49381072 ggcttaattggatatttggtcccctaaataattatgagtttacattttggtcctataaattgtaaaactcatattttggtaccctt 49380987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 322 - 402
Target Start/End: Original strand, 13620918 - 13620999
Alignment:
Q  322 ggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaa-tcacattttggtcc 402  Q
    ||||||||| |||||||||||||||||||||||||| || ||||||||||||  ||||||||||||| ||||||||||||||    
T  13620918 ggcttaatttgacatttggtcctctaaataattatgcgtttacattttggtctcataaattgtaaaactcacattttggtcc 13620999  T

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Target: chr3; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 322 - 397
Target Start/End: Original strand, 49379699 - 49379775
Alignment:
Q  322 ggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaa-tcacatttt 397  Q
    |||||||||||||||||||||||||||||||||||| || || |||||||||| ||||||||||||| |||||||||    
T  49379699 ggcttaattggacatttggtcctctaaataattatgcgtttatattttggtcccataaattgtaaaactcacatttt 49379775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 295
Target Start/End: Complemental strand, 48083485 - 48083382
Alignment:
Q  192 taagataaaatagacattcacgatccaacagtcttctttttaaaaaataaattgaatcgtttaaattaaagaaatccatagggtctatggtggaccactc 291  Q
    ||||||| ||| ||| |||| |||||||||||| || |||||||| ||| || |||| ||||||||||||  |||  ||||| |||||||| ||||||||    
T  48083485 taagatacaatggaccttcatgatccaacagtcctcattttaaaatatagatcgaatggtttaaattaaaataattaataggatctatggtagaccactc 48083386  T
Q  292 ttaa 295  Q
    ||||    
T  48083385 ttaa 48083382  T

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Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 286
Target Start/End: Original strand, 20336536 - 20336609
Alignment:
Q  213 gatccaacagtcttctttttaaaaaataaattgaatcgtttaaattaaagaaatccatagggtctatggtggac 286  Q
    |||||||| ||  |||||| |||||||||||||||| |||||||||||| ||||  ||| ||||||||||||||    
T  20336536 gatccaacggttctcttttaaaaaaataaattgaatggtttaaattaaataaattaataaggtctatggtggac 20336609  T

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Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 285
Target Start/End: Original strand, 20288104 - 20288175
Alignment:
Q  214 atccaacagtcttctttttaaaaaataaattgaatcgtttaaattaaagaaatccatagggtctatggtgga 285  Q
    ||||||| ||| ||||||||||||||||| | ||| |||||||||||| ||||  ||| |||||||||||||    
T  20288104 atccaacggtcctctttttaaaaaataaactaaatggtttaaattaaataaattaataaggtctatggtgga 20288175  T

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Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 191 - 286
Target Start/End: Original strand, 20314621 - 20314716
Alignment:
Q  191 gtaagataaaatagacattcacgatccaacagtcttctttttaaaaaataaattgaatcgtttaaattaaagaaatccatagggtctatggtggac 286  Q
    |||| ||| ||| ||| |||| |||||||| ||| |||||| |||||||||||  ||| |||||||||||| ||||  ||| ||||||||||||||    
T  20314621 gtaatatacaatggaccttcatgatccaacggtcctcttttgaaaaaataaatcaaatggtttaaattaaataaattaataaggtctatggtggac 20314716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 191 - 286
Target Start/End: Complemental strand, 36175521 - 36175426
Alignment:
Q  191 gtaagataaaatagacattcacgatccaacagtcttctttttaaaaaataaattgaatcgtttaaattaaagaaatccatagggtctatggtggac 286  Q
    |||| ||| ||| ||| |||| ||||||||| || ||||||| ||||| |||| |||| |||||||||||||||||  ||||| | ||||||||||    
T  36175521 gtaacatataatggaccttcatgatccaacactcatcttttttaaaaaaaaatcgaatggtttaaattaaagaaattaataggatatatggtggac 36175426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 306
Target Start/End: Original strand, 14745080 - 14745172
Alignment:
Q  214 atccaacagtcttctttttaaaaaataaattgaatcgtttaaattaaagaaatccatagggtctatggtggaccactcttaatgttggtccac 306  Q
    ||||||||||| || |||||||| ||| ||  ||  ||||||||||||  |||  ||||| ||||||||| ||||||||||| ||||||||||    
T  14745080 atccaacagtcctcattttaaaatatagatcaaacagtttaaattaaaataattaataggatctatggtgaaccactcttaaggttggtccac 14745172  T

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Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 306
Target Start/End: Complemental strand, 20335488 - 20335392
Alignment:
Q  208 ttcacgatccaacagtcttctttttaaaaaataaattgaatcgtttaaattaaagaaatccatagggtctatggtggaccactct-taatgttggtccac 306  Q
    |||| |||||||| ||| ||||||||||||   |||||||| |||||||||||| ||||  ||| |||||||||||||| | ||| ||||||||||||||    
T  20335488 ttcatgatccaacggtcctctttttaaaaag--aattgaatggtttaaattaaataaattaataaggtctatggtggacta-tctataatgttggtccac 20335392  T

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Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 306
Target Start/End: Complemental strand, 35371132 - 35371052
Alignment:
Q  226 tctttttaaaaaataaattgaatcgtttaaattaaagaaatccatagggtctatggtggaccactcttaatgttggtccac 306  Q
    ||||||||||||| ||||  ||  ||| ||||||||  |||  ||||| ||||||||||||||||||||| ||||||||||    
T  35371132 tctttttaaaaaaaaaatcaaaaagttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccac 35371052  T

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Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 306
Target Start/End: Original strand, 12107913 - 12107950
Alignment:
Q  269 atagggtctatggtggaccactcttaatgttggtccac 306  Q
    |||||||||||||||||||||| |||| ||||||||||    
T  12107913 atagggtctatggtggaccacttttaaggttggtccac 12107950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 208 - 283
Target Start/End: Complemental strand, 20313618 - 20313545
Alignment:
Q  208 ttcacgatccaacagtcttctttttaaaaaataaattgaatcgtttaaattaaagaaatccatagggtctatggtg 283  Q
    |||| |||||||| ||| ||||||||||||   |||||||| |||||||||||| ||||  ||| |||||||||||    
T  20313618 ttcatgatccaacggtcctctttttaaaaag--aattgaatggtttaaattaaataaattaataaggtctatggtg 20313545  T

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Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 24487143 - 24487191
Alignment:
Q  158 aaagggaaaattaattattt-ttgttgtctcaccgtaagataaaataga 205  Q
    ||||||||||||||||| || |||||| || ||||||||||||||||||    
T  24487143 aaagggaaaattaattagttgttgttgacttaccgtaagataaaataga 24487191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 306
Target Start/End: Original strand, 27841645 - 27841681
Alignment:
Q  270 tagggtctatggtggaccactcttaatgttggtccac 306  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  27841645 taggatctatggtggaccactcttaaggttggtccac 27841681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 5e-32; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 321 - 406
Target Start/End: Complemental strand, 41329589 - 41329503
Alignment:
Q  321 tggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaa-tcacattttggtcccctt 406  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  41329589 tggcttaattggacatttggtcccctaaataattatgagtttacattttggtcctataaattgtaaaactcacattttggtcccctt 41329503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 322 - 402
Target Start/End: Original strand, 41328217 - 41328298
Alignment:
Q  322 ggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaa-tcacattttggtcc 402  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||| ||||||||||||||    
T  41328217 ggcttaattggacatttggtcctctaaataattatgcgtttacattttggtcccataaattgtaaaactcacattttggtcc 41328298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 322 - 402
Target Start/End: Original strand, 39981315 - 39981396
Alignment:
Q  322 ggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaa-tcacattttggtcc 402  Q
    |||||||||||||||||| |||||||||||||| || || ||||||||||||| ||||||||||||| ||||||||||||||    
T  39981315 ggcttaattggacatttgatcctctaaataattgtgcgtttacattttggtcccataaattgtaaaattcacattttggtcc 39981396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 208 - 283
Target Start/End: Complemental strand, 11344746 - 11344671
Alignment:
Q  208 ttcacgatccaacagtcttctttttaaaaaataaattgaatcgtttaaattaaagaaatccatagggtctatggtg 283  Q
    |||| |||| ||||||| |||||||||||||||||| |||| |||||||||||||||||  ||||||| |||||||    
T  11344746 ttcatgatctaacagtcctctttttaaaaaataaatcgaatggtttaaattaaagaaattaatagggtatatggtg 11344671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 406
Target Start/End: Original strand, 32653460 - 32653546
Alignment:
Q  321 tggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaa-tcacattttggtcccctt 406  Q
    ||||||||||||| |||| ||||  |||||||||||| || ||||||||||||  ||||||||||||| |||||||| |||||||||    
T  32653460 tggcttaattggatatttagtcccttaaataattatgcgtttacattttggtctcataaattgtaaaactcacatttcggtcccctt 32653546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 406
Target Start/End: Complemental strand, 35296918 - 35296851
Alignment:
Q  340 gtcctctaaataattatgagtatacattttggtcctataaattgtaaaa-tcacattttggtcccctt 406  Q
    |||||||||||||||   ||| ||||||||||||||||||||||||||| |||||||||||| |||||    
T  35296918 gtcctctaaataatttgtagtttacattttggtcctataaattgtaaaactcacattttggtaccctt 35296851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 214 - 306
Target Start/End: Complemental strand, 35295935 - 35295843
Alignment:
Q  214 atccaacagtcttctttttaaaaaataaattgaatcgtttaaattaaagaaatccatagggtctatggtggaccactcttaatgttggtccac 306  Q
    ||||||||||| || |||||||| ||| ||  ||  ||||||||||||  |||  ||||| ||||||||||||||||||||| ||||||||||    
T  35295935 atccaacagtcctcattttaaaatatagatcaaacggtttaaattaaaataattaataggatctatggtggaccactcttaaggttggtccac 35295843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 374
Target Start/End: Complemental strand, 32653784 - 32653733
Alignment:
Q  323 gcttaattggacatttggtcctctaaataattatgagtatacattttggtcc 374  Q
    ||||||||||||||||||||| |||||||||||||  | |||||||||||||    
T  32653784 gcttaattggacatttggtcccctaaataattatgtatttacattttggtcc 32653733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 45455247 - 45455305
Alignment:
Q  208 ttcacgatccaacagtcttctttttaaaaaataaattgaatcgtttaaattaaagaaat 266  Q
    |||| ||||||||  || |||||||||||||||||| |||| |||||||||||||||||    
T  45455247 ttcatgatccaacgctcctctttttaaaaaataaatcgaatggtttaaattaaagaaat 45455305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 306
Target Start/End: Complemental strand, 40811593 - 40811465
Alignment:
Q  178 ttgttgtctcaccgtaagataaaatagacattcacgatccaacagtcttctttttaaaaaataaattgaatcgtttaaattaaagaaatccatagggtct 277  Q
    |||||| ||||| | |||||| |||||||||||| |||| |||| |  |||||| | |||| | ||  ||  |||||||||||| | ||  ||||  |||    
T  40811593 ttgttgactcacaggaagatacaatagacattcatgatctaacaattatcttttaataaaaaagatcaaacggtttaaattaaaaatattaatagaatct 40811494  T
Q  278 atggtggaccactcttaatgttggtccac 306  Q
    |||||||||||||||||| ||||||||||    
T  40811493 atggtggaccactcttaaggttggtccac 40811465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 43460738 - 43460794
Alignment:
Q  250 gtttaaattaaagaaatccatagggtctatggtggaccactcttaatgttggtccac 306  Q
    ||||||||||||  |||  ||||| ||||||||||||||||||||| ||||||||||    
T  43460738 gtttaaattaaaataattaataggatctatggtggaccactcttaaagttggtccac 43460794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 403
Target Start/End: Complemental strand, 669506 - 669424
Alignment:
Q  322 ggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaatc-acattttggtccc 403  Q
    ||||||||||||  |||||||| |||| ||||||| ||| | ||||||||||| |||| | |||||||| |||||| ||||||    
T  669506 ggcttaattggatttttggtcccctaagtaattatcagttttcattttggtcccataattcgtaaaatcaacatttcggtccc 669424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 307
Target Start/End: Complemental strand, 44372910 - 44372872
Alignment:
Q  269 atagggtctatggtggaccactcttaatgttggtccact 307  Q
    ||||| ||||||||||||||||||||||||| |||||||    
T  44372910 ataggatctatggtggaccactcttaatgttagtccact 44372872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 307
Target Start/End: Complemental strand, 44381766 - 44381728
Alignment:
Q  269 atagggtctatggtggaccactcttaatgttggtccact 307  Q
    ||||| ||||||||||||||||||||||||| |||||||    
T  44381766 ataggatctatggtggaccactcttaatgttagtccact 44381728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 307
Target Start/End: Original strand, 22115104 - 22115137
Alignment:
Q  274 gtctatggtggaccactcttaatgttggtccact 307  Q
    |||||||||||||||||||||| |||||||||||    
T  22115104 gtctatggtggaccactcttaaggttggtccact 22115137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 306
Target Start/End: Complemental strand, 32255172 - 32255135
Alignment:
Q  269 atagggtctatggtggaccactcttaatgttggtccac 306  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  32255172 ataggatctatggtggaccactcttaaggttggtccac 32255135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 307
Target Start/End: Original strand, 40509674 - 40509707
Alignment:
Q  274 gtctatggtggaccactcttaatgttggtccact 307  Q
    |||||||||||||||||||||| |||||||||||    
T  40509674 gtctatggtggaccactcttaaggttggtccact 40509707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 3e-30; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 324 - 406
Target Start/End: Original strand, 36243519 - 36243602
Alignment:
Q  324 cttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaa-tcacattttggtcccctt 406  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  36243519 cttaattggacatttggtcccctaaataattatgagtttacattttggtcctataaattgtaaaactcacattttggtcccctt 36243602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 322 - 403
Target Start/End: Complemental strand, 8363507 - 8363425
Alignment:
Q  322 ggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaa-tcacattttggtccc 403  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  8363507 ggcttaattggacatttggtcccctaaataattatgagtttacattttggtcctataaattgtaaaactcacattttggtccc 8363425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 322 - 406
Target Start/End: Original strand, 26495120 - 26495205
Alignment:
Q  322 ggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaa-tcacattttggtcccctt 406  Q
    |||||||||| | ||||||||| |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||    
T  26495120 ggcttaattgaatatttggtcccctaaataattatgagtttacattttgctcctataaattgtaaaactcacattttggtcccctt 26495205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 322 - 402
Target Start/End: Complemental strand, 26496427 - 26496346
Alignment:
Q  322 ggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaa-tcacattttggtcc 402  Q
    ||||||||||||||||||||||||||| |||||||| || ||||||||||||| ||||||||||||| ||||||||||||||    
T  26496427 ggcttaattggacatttggtcctctaactaattatgtgtttacattttggtcccataaattgtaaaactcacattttggtcc 26496346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 322 - 406
Target Start/End: Original strand, 56156933 - 56157018
Alignment:
Q  322 ggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaa-tcacattttggtcccctt 406  Q
    |||||||||||| ||||||||| |||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||| ||||    
T  56156933 ggcttaattggatatttggtcccctaaataattatgagtttacattttggtcccataaattgtaaaactcacattttggtctcctt 56157018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 322 - 388
Target Start/End: Complemental strand, 20625622 - 20625556
Alignment:
Q  322 ggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaa 388  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||    
T  20625622 ggcttaattggacatttggtcctctaaataattatgagtttacattttggtcccataagttgtaaaa 20625556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 322 - 402
Target Start/End: Original strand, 52137424 - 52137505
Alignment:
Q  322 ggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaatc-acattttggtcc 402  Q
    |||||||||||| ||||||||||||||||||||||| || ||||||||||||| ||||||||||||| | ||||||||||||    
T  52137424 ggcttaattggatatttggtcctctaaataattatgtgtttacattttggtcccataaattgtaaaaccaacattttggtcc 52137505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 321 - 388
Target Start/End: Original strand, 20620136 - 20620203
Alignment:
Q  321 tggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaa 388  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||| ||||||||    
T  20620136 tggcttaattggacctttggtcctctaaataattatgagtttacattttggtcccataagttgtaaaa 20620203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 322 - 403
Target Start/End: Complemental strand, 56157614 - 56157532
Alignment:
Q  322 ggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaa-tcacattttggtccc 403  Q
    |||||||||||| ||||||||||||||||||||||| || |||||||||||   ||||||||||||| |||||||||||||||    
T  56157614 ggcttaattggatatttggtcctctaaataattatgcgtttacattttggtttcataaattgtaaaactcacattttggtccc 56157532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 322 - 406
Target Start/End: Complemental strand, 36244885 - 36244800
Alignment:
Q  322 ggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaa-tcacattttggtcccctt 406  Q
    |||||||||||| ||||||||| | |||||||||||||| ||||||||| ||| ||||||||||||| ||||||||| ||||||||    
T  36244885 ggcttaattggatatttggtccccaaaataattatgagtttacattttgatcccataaattgtaaaactcacatttttgtcccctt 36244800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 204 - 286
Target Start/End: Complemental strand, 42871340 - 42871258
Alignment:
Q  204 gacattcacgatccaacagtcttctttttaaaaaataaattgaatcgtttaaattaaagaaatccatagggtctatggtggac 286  Q
    |||||||| |||| |||| ||  ||||||||||||||||| |||| |||||||||||||||||  |||||||||| |||||||    
T  42871340 gacattcatgatctaacactcccctttttaaaaaataaatcgaatagtttaaattaaagaaattaatagggtctacggtggac 42871258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 52138913 - 52138832
Alignment:
Q  321 tggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaatcacattttggtcc 402  Q
    |||||||||| |||||||| ||||||||||||||||| || || |||||| ||  ||||||||||| | | |||||||||||    
T  52138913 tggcttaattcgacatttgatcctctaaataattatgcgtttatattttgatcacataaattgtaagaccccattttggtcc 52138832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 1794613 - 1794557
Alignment:
Q  250 gtttaaattaaagaaatccatagggtctatggtggaccactcttaatgttggtccac 306  Q
    |||||||||||| || |  ||| ||||||||||||||||||||||| ||||||||||    
T  1794613 gtttaaattaaaaaatttaataaggtctatggtggaccactcttaaggttggtccac 1794557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 15449990 - 15450046
Alignment:
Q  250 gtttaaattaaagaaatccatagggtctatggtggaccactcttaatgttggtccac 306  Q
    |||||||||||| | ||  ||||| ||||||||||||||||||||| ||||||||||    
T  15449990 gtttaaattaaaaatattaataggatctatggtggaccactcttaaggttggtccac 15450046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 52240078 - 52240022
Alignment:
Q  250 gtttaaattaaagaaatccatagggtctatggtggaccactcttaatgttggtccac 306  Q
    |||||||||||| | ||  ||||| ||||||||||||||||||||| ||||||||||    
T  52240078 gtttaaattaaaaatattaataggatctatggtggaccactcttaaggttggtccac 52240022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 306
Target Start/End: Complemental strand, 56085610 - 56085491
Alignment:
Q  186 tcaccgtaagataaaatagacattcacgatccaacagtcttctttttaaaaaataaattgaatcgtttaaattaaagaaatccatagggtctatggtgga 285  Q
    |||| ||||||||||||| ||||    |||||||| ||| || |||||||||| ||||  ||  ||||||||||||  |||  ||||| |||||||||||    
T  56085610 tcactgtaagataaaatacacatgtgtgatccaacggtcatccttttaaaaaa-aaatcaaacggtttaaattaaaataattaataggatctatggtgga 56085512  T
Q  286 ccactcttaatgttggtccac 306  Q
    |||||||||| ||| ||||||    
T  56085511 ccactcttaaggttagtccac 56085491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 306
Target Start/End: Complemental strand, 13165671 - 13165639
Alignment:
Q  274 gtctatggtggaccactcttaatgttggtccac 306  Q
    |||||||||||||||||||||| ||||||||||    
T  13165671 gtctatggtggaccactcttaaggttggtccac 13165639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 27850853 - 27850909
Alignment:
Q  250 gtttaaattaaagaaatccatagggtctatggtggaccactcttaatgttggtccac 306  Q
    ||||||||||||  |||  ||||| |||||||||||||||| |||| ||||||||||    
T  27850853 gtttaaattaaaataattaataggatctatggtggaccacttttaaggttggtccac 27850909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 1e-29; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 317 - 406
Target Start/End: Complemental strand, 14479638 - 14479548
Alignment:
Q  317 ttaatggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaa-tcacattttggtcccctt 406  Q
    |||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||    
T  14479638 ttaaaggcttaattggacatttggtcccctaaataattatgagtttacattttggtcccataaattgtaaaactcacattttggtcccctt 14479548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 316 - 402
Target Start/End: Original strand, 51445582 - 51445669
Alignment:
Q  316 attaatggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaa-tcacattttggtcc 402  Q
    ||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||| ||||||||||||||    
T  51445582 attaaaggcttaattggacatttggtcctctaaataattatgcgtttacattttggtcccataaattgtaaaactcacattttggtcc 51445669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 319 - 402
Target Start/End: Original strand, 14478261 - 14478345
Alignment:
Q  319 aatggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaa-tcacattttggtcc 402  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| ||||||||||||| ||||||||||||||    
T  14478261 aatggcttaattggacatttggtcctctaaataattatgtgtttacattttgatcccataaattgtaaaactcacattttggtcc 14478345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 322 - 406
Target Start/End: Original strand, 28050319 - 28050404
Alignment:
Q  322 ggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaat-cacattttggtcccctt 406  Q
    ||||||||| ||||||||||||  |||||||||||| || ||||||||||||| |||||||||||||| |||||||||||||||||    
T  28050319 ggcttaattagacatttggtcccttaaataattatgtgtttacattttggtcccataaattgtaaaatccacattttggtcccctt 28050404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 322 - 406
Target Start/End: Complemental strand, 28051725 - 28051640
Alignment:
Q  322 ggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaa-tcacattttggtcccctt 406  Q
    |||||||||||| ||||| | | |||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||    
T  28051725 ggcttaattggatatttgattccctaaataattatgagtttacattttggtcccataaattgtaaaactcacattttggtcccctt 28051640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 323 - 406
Target Start/End: Complemental strand, 51446960 - 51446876
Alignment:
Q  323 gcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaa-tcacattttggtcccctt 406  Q
    |||||||||||||||||||||||||||||||||||  | ||||||||||||  |||||||||||||  |||||||||||||||||    
T  51446960 gcttaattggacatttggtcctctaaataattatgcatttacattttggtcacataaattgtaaaacccacattttggtcccctt 51446876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 286
Target Start/End: Complemental strand, 42244894 - 42244795
Alignment:
Q  186 tcaccgtaagataaaatagacattcacgatccaacagtcttctttttaaaaaataaattgaatcgtttaaattaaagaaatccatagggtctatggtgga 285  Q
    ||||||||| ||| ||| ||| || |||||| ||||||| ||||||||||| | |||| |||  |||||||||||||||||  |||||||||||| ||||    
T  42244894 tcaccgtaaaatataatggacttttacgatcgaacagtcctctttttaaaaga-aaatcgaagggtttaaattaaagaaattaatagggtctatgatgga 42244796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 403
Target Start/End: Complemental strand, 40533706 - 40533640
Alignment:
Q  338 tggtcctctaaataattatgagtatacattttggtcctataaattgtaaaatc-acattttggtccc 403  Q
    |||||| |||||||||||| ||| ||||||||||| | ||||||||||||| | |||||||||||||    
T  40533706 tggtcccctaaataattatcagtttacattttggttccataaattgtaaaaccaacattttggtccc 40533640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 322 - 389
Target Start/End: Complemental strand, 12667393 - 12667326
Alignment:
Q  322 ggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaat 389  Q
    ||||||||||||  ||| ||||||||||||||||| ||| | ||||||||||||| || | |||||||    
T  12667393 ggcttaattggatttttagtcctctaaataattatcagttttcattttggtcctagaattcgtaaaat 12667326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 403
Target Start/End: Complemental strand, 26287902 - 26287820
Alignment:
Q  322 ggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaatc-acattttggtccc 403  Q
    ||||||||||||| ||||||||||||| |||||    || | ||||||||||| |||| | |||||||| |||||||||||||    
T  26287902 ggcttaattggacttttggtcctctaactaatttgttgttttcattttggtcccataattcgtaaaatcaacattttggtccc 26287820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 306
Target Start/End: Original strand, 16965060 - 16965097
Alignment:
Q  269 atagggtctatggtggaccactcttaatgttggtccac 306  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  16965060 ataggatctatggtggaccactcttaaagttggtccac 16965097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 306
Target Start/End: Original strand, 51300199 - 51300232
Alignment:
Q  273 ggtctatggtggaccactcttaatgttggtccac 306  Q
    |||||||||||||||||| |||||||||||||||    
T  51300199 ggtctatggtggaccacttttaatgttggtccac 51300232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 400
Target Start/End: Original strand, 5611723 - 5611803
Alignment:
Q  321 tggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaatc-acattttggt 400  Q
    |||||||||||||| ||||||||| ||| |||||    || | ||||||||||| |||| |||||||||| ||||||||||    
T  5611723 tggcttaattggacttttggtcctttaactaatttgttgttttcattttggtcccataatttgtaaaatcaacattttggt 5611803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 306
Target Start/End: Original strand, 41873911 - 41873943
Alignment:
Q  274 gtctatggtggaccactcttaatgttggtccac 306  Q
    |||||||||||||||||||||| ||||||||||    
T  41873911 gtctatggtggaccactcttaaggttggtccac 41873943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 321 - 406
Target Start/End: Original strand, 38537 - 38623
Alignment:
Q  321 tggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaa-tcacattttggtcccctt 406  Q
    ||||||||||||||||||||||| |||||||||||||||| | ||||||||||| ||||||||||||| ||||||||||||||||||    
T  38537 tggcttaattggacatttggtcccctaaataattatgagtttccattttggtcccataaattgtaaaactcacattttggtcccctt 38623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 1e-26; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 322 - 402
Target Start/End: Complemental strand, 9854997 - 9854916
Alignment:
Q  322 ggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaat-cacattttggtcc 402  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||| |||||||||||||    
T  9854997 ggcttaattggacatttggtcctctaaataattatgtgtttacattttggtcccataaattgtaaaatccacattttggtcc 9854916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 286
Target Start/End: Original strand, 26697712 - 26697785
Alignment:
Q  213 gatccaacagtcttctttttaaaaaataaattgaatcgtttaaattaaagaaatccatagggtctatggtggac 286  Q
    ||||||||| || |||||||||||||||||| |||| || ||||||||||||||   |||||||||||||||||    
T  26697712 gatccaacactcctctttttaaaaaataaatcgaatggtataaattaaagaaattactagggtctatggtggac 26697785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 229 - 306
Target Start/End: Original strand, 9854774 - 9854851
Alignment:
Q  229 ttttaaaaaataaattgaatcgtttaaattaaagaaatccatagggtctatggtggaccactcttaatgttggtccac 306  Q
    |||||||||| ||||  ||| |||||||||| |  |||  ||||| ||||||||||||||||||||| ||||||||||    
T  9854774 ttttaaaaaaaaaatcaaatggtttaaattagaagaattaataggatctatggtggaccactcttaaagttggtccac 9854851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 321 - 403
Target Start/End: Original strand, 28291292 - 28291375
Alignment:
Q  321 tggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaatc-acattttggtccc 403  Q
    |||||||||||||  |||||||| |||| ||||||| ||| | ||||||||||| |||| | |||||||| |||||| ||||||    
T  28291292 tggcttaattggatttttggtcccctaagtaattatcagttttcattttggtcccataattcgtaaaatcaacatttcggtccc 28291375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 388
Target Start/End: Original strand, 9853565 - 9853631
Alignment:
Q  322 ggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaa 388  Q
    |||||||||| ||||| | |||| |||||||||||  || || |||||||||| |||||||||||||    
T  9853565 ggcttaattgaacattagctcctttaaataattatatgtttatattttggtcccataaattgtaaaa 9853631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 307
Target Start/End: Original strand, 20180609 - 20180647
Alignment:
Q  269 atagggtctatggtggaccactcttaatgttggtccact 307  Q
    ||||| ||||||||||||||||||||||||| |||||||    
T  20180609 ataggatctatggtggaccactcttaatgttagtccact 20180647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 306
Target Start/End: Original strand, 24192598 - 24192635
Alignment:
Q  269 atagggtctatggtggaccactcttaatgttggtccac 306  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  24192598 ataggatctatggtggaccactcttaaggttggtccac 24192635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 32798447 - 32798503
Alignment:
Q  250 gtttaaattaaagaaatccatagggtctatggtggaccactcttaatgttggtccac 306  Q
    ||||||||||||  |||  ||||| ||||||||||||||||||||| |||| |||||    
T  32798447 gtttaaattaaaataattaataggatctatggtggaccactcttaaggttgatccac 32798503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 42098760 - 42098708
Alignment:
Q  254 aaattaaagaaatccatagggtctatggtggaccactcttaatgttggtccac 306  Q
    ||||||||| |||  ||||| |||||||||||||||| |||| ||||||||||    
T  42098760 aaattaaagtaattaataggatctatggtggaccacttttaaggttggtccac 42098708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 1e-26; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 322 - 406
Target Start/End: Original strand, 28610020 - 28610105
Alignment:
Q  322 ggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaa-tcacattttggtcccctt 406  Q
    |||||||||||||||||||||  |||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||    
T  28610020 ggcttaattggacatttggtcacctaaataattatgagtttacattttggtcccataaattgtaaaattcacattttggtcccctt 28610105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 322 - 402
Target Start/End: Complemental strand, 4921176 - 4921095
Alignment:
Q  322 ggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaa-tcacattttggtcc 402  Q
    |||||||||||||||||||||||||||||||||||| || |||||||| |||| ||||||||||||| ||||||||||||||    
T  4921176 ggcttaattggacatttggtcctctaaataattatgcgtttacattttagtcccataaattgtaaaactcacattttggtcc 4921095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 319 - 406
Target Start/End: Original strand, 4919822 - 4919910
Alignment:
Q  319 aatggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaat-cacattttggtcccctt 406  Q
    |||||||||||||||||||||||||||||||||||||||  | |||| |||||||| ||||||| |||||| |||||||||||||||||    
T  4919822 aatggcttaattggacatttggtcctctaaataattatgcatttacaatttggtcccataaattataaaatccacattttggtcccctt 4919910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 322 - 402
Target Start/End: Complemental strand, 28611370 - 28611289
Alignment:
Q  322 ggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaa-tcacattttggtcc 402  Q
    |||||||||||| ||||||||||||||||||||||| || ||||||||||||| ||||||||||||| ||| ||||||||||    
T  28611370 ggcttaattggatatttggtcctctaaataattatgcgtttacattttggtcccataaattgtaaaattcatattttggtcc 28611289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 325 - 388
Target Start/End: Complemental strand, 8321358 - 8321295
Alignment:
Q  325 ttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaa 388  Q
    ||||||||||||||| ||||||||||||||||| || ||||||||||||| ||||||| |||||    
T  8321358 ttaattggacatttgatcctctaaataattatgcgtttacattttggtcccataaattttaaaa 8321295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 400
Target Start/End: Original strand, 45699523 - 45699577
Alignment:
Q  347 aaataattatgagtatacattttggtcctataaattgtaaaa-tcacattttggt 400  Q
    ||||||||||| || ||||||||||||| ||||||||||||| ||||||||||||    
T  45699523 aaataattatgtgtttacattttggtcccataaattgtaaaattcacattttggt 45699577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 403
Target Start/End: Complemental strand, 19398916 - 19398836
Alignment:
Q  324 cttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaatc-acattttggtccc 403  Q
    ||||||||| | |||||| | |||||||||||   || ||||||||||||| ||||||||||||| | |||||||||||||    
T  19398916 cttaattggtcttttggttccctaaataattaccggtttacattttggtcccataaattgtaaaacctacattttggtccc 19398836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 403
Target Start/End: Original strand, 19397544 - 19397610
Alignment:
Q  338 tggtcctctaaataattatgagtatacattttggtcctataaattgtaaaa-tcacattttggtccc 403  Q
    |||||| |||||||||||  ||| ||||||||||||| ||||||| ||||| | |||||||||||||    
T  19397544 tggtcccctaaataattaccagtttacattttggtcccataaattttaaaactaacattttggtccc 19397610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 303
Target Start/End: Original strand, 34513469 - 34513522
Alignment:
Q  250 gtttaaattaaagaaatccatagggtctatggtggaccactcttaatgttggtc 303  Q
    |||||||||||| ||||  ||| ||||||||||||| ||||||||| |||||||    
T  34513469 gtttaaattaaaaaaattaataaggtctatggtggatcactcttaaggttggtc 34513522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 303
Target Start/End: Complemental strand, 43033281 - 43033228
Alignment:
Q  250 gtttaaattaaagaaatccatagggtctatggtggaccactcttaatgttggtc 303  Q
    ||||||||||||  |||  ||||||| ||||||||||||||||||| |||||||    
T  43033281 gtttaaattaaaataattaatagggtttatggtggaccactcttaaggttggtc 43033228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 32469350 - 32469294
Alignment:
Q  250 gtttaaattaaagaaatccatagggtctatggtggaccactcttaatgttggtccac 306  Q
    ||||||||||||  |||  ||||| ||||| ||||||||||||||| ||||||||||    
T  32469350 gtttaaattaaaataattaataggatctatagtggaccactcttaaagttggtccac 32469294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 7e-25; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 322 - 403
Target Start/End: Original strand, 11796567 - 11796649
Alignment:
Q  322 ggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaa-tcacattttggtccc 403  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||| ||| |||||||||||    
T  11796567 ggcttaattggacatttggtcccctaaataattatgagtttacattttggtcccataaattgtaaaactcatattttggtccc 11796649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 321 - 388
Target Start/End: Original strand, 23325909 - 23325976
Alignment:
Q  321 tggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaa 388  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||    
T  23325909 tggcttaattggacatttggtcctctaaataattatgagtttacattttggtcccataagttgtaaaa 23325976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 322 - 388
Target Start/End: Complemental strand, 23334085 - 23334019
Alignment:
Q  322 ggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaa 388  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||    
T  23334085 ggcttaattggacatttggtcctctaaataattatgagtttacattttggtcccataagttgtaaaa 23334019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 322 - 403
Target Start/End: Complemental strand, 11797651 - 11797569
Alignment:
Q  322 ggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaatc-acattttggtccc 403  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||  |||| | |||||||| |||||||||||||    
T  11797651 ggcttaattggacatttggtcccctaaataattatgagtttacattttggtctcataactcgtaaaatcaacattttggtccc 11797569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 306
Target Start/End: Complemental strand, 11262615 - 11262537
Alignment:
Q  228 tttttaaaaaataaattgaatcgtttaaattaaagaaatccatagggtctatggtggaccactcttaatgttggtccac 306  Q
    ||||||||||| | ||  ||| |||||||||| |  |||  ||||| ||||||||||||||||||||| ||||||||||    
T  11262615 tttttaaaaaaaagatcaaatggtttaaattataataattaataggatctatggtggaccactcttaaggttggtccac 11262537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 306
Target Start/End: Complemental strand, 1009366 - 1009329
Alignment:
Q  269 atagggtctatggtggaccactcttaatgttggtccac 306  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  1009366 ataggatctatggtggaccactcttaaggttggtccac 1009329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 306
Target Start/End: Complemental strand, 30910924 - 30910887
Alignment:
Q  269 atagggtctatggtggaccactcttaatgttggtccac 306  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  30910924 ataggatctatggtggaccactcttaaggttggtccac 30910887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 22047934 - 22047878
Alignment:
Q  250 gtttaaattaaagaaatccatagggtctatggtggaccactcttaatgttggtccac 306  Q
    ||||||||||||  ||| |||||| | ||||||||||||||||||| |||| |||||    
T  22047934 gtttaaattaaaataattcataggatttatggtggaccactcttaaggttgatccac 22047878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 27705231 - 27705287
Alignment:
Q  250 gtttaaattaaagaaatccatagggtctatggtggaccactcttaatgttggtccac 306  Q
    |||||||||||| | ||  ||||| |||||||||||||||| |||| ||||||||||    
T  27705231 gtttaaattaaaaatattaataggatctatggtggaccacttttaaggttggtccac 27705287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 30859086 - 30859142
Alignment:
Q  250 gtttaaattaaagaaatccatagggtctatggtggaccactcttaatgttggtccac 306  Q
    ||||||||||||  |||  ||||| |||||||||||||||||||||  |||||||||    
T  30859086 gtttaaattaaaataattaataggatctatggtggaccactcttaagattggtccac 30859142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 322 - 400
Target Start/End: Original strand, 6893 - 6972
Alignment:
Q  322 ggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaatc-acattttggt 400  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||| | ||||||||||    
T  6893 ggcttaattggacatttggtcctctaaataattatgtgtttacattttggtcccataaattgtaaaaccaacattttggt 6972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 403
Target Start/End: Complemental strand, 8308 - 8226
Alignment:
Q  322 ggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaatc-acattttggtccc 403  Q
    |||||||||| || |||||||| |||| ||||| |  || ||||||||||||| |||| | |||||||| |||||||||||||    
T  8308 ggcttaattgaacttttggtcccctaagtaattctttgtttacattttggtcccataactcgtaaaatcaacattttggtccc 8226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 11722783 - 11722865
Alignment:
Q  321 tggcttaattggacatttggtcctctaaataattatgagtatacattttggtcctataaattgtaaaa-tcacattttggtcc 402  Q
    ||||||||||||||||||| ||||||||||||||||| || ||||||||| ||| ||||||||||||| ||||||||||||||    
T  11722783 tggcttaattggacatttgatcctctaaataattatgtgtttacattttgatcccataaattgtaaaactcacattttggtcc 11722865  T

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Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 191 - 306
Target Start/End: Complemental strand, 15728989 - 15728874
Alignment:
Q  191 gtaagataaaatagacattcacgatccaacagtcttctttttaaaaaataaattgaatcgtttaaattaaagaaatccatagggtctatggtggaccact 290  Q
    |||| ||| ||| ||| |||| |||| || |||| |||||| ||||||||||| | ||  ||||||||||||||||  |||||||||||||||||| | |    
T  15728989 gtaacatacaattgaccttcatgatctaatagtcctcttttaaaaaaataaatcggatgatttaaattaaagaaattaatagggtctatggtggacta-t 15728891  T
Q  291 ct-taatgttggtccac 306  Q
    || ||||||||||||||    
T  15728890 ctataatgttggtccac 15728874  T

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Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 227 - 286
Target Start/End: Original strand, 5077766 - 5077825
Alignment:
Q  227 ctttttaaaaaataaattgaatcgtttaaattaaagaaatccatagggtctatggtggac 286  Q
    ||||||||||||||||| |||| |||||||||||||||||   ||||||||| |||||||    
T  5077766 ctttttaaaaaataaatcgaatggtttaaattaaagaaattagtagggtctacggtggac 5077825  T

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Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 306
Target Start/End: Complemental strand, 17837798 - 17837761
Alignment:
Q  269 atagggtctatggtggaccactcttaatgttggtccac 306  Q
    ||||| ||||||||||||||||||||||||| ||||||    
T  17837798 ataggatctatggtggaccactcttaatgtttgtccac 17837761  T

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Target: scaffold0128 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 306
Target Start/End: Complemental strand, 22197 - 22124
Alignment:
Q  233 aaaaaataaattgaatcgtttaaattaaagaaatccatagggtctatggtggaccactcttaatgttggtccac 306  Q
    |||||||||||  ||| |||||||||||||||||  |||||||||||||||||||||    |||||||||||||    
T  22197 aaaaaataaatcaaatggtttaaattaaagaaattaatagggtctatggtggaccacctacaatgttggtccac 22124  T

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Target: scaffold2071 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold2071
Description:

Target: scaffold2071; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 305
Target Start/End: Original strand, 597 - 652
Alignment:
Q  250 gtttaaattaaagaaatccatagggtctatggtggaccactcttaatgttggtcca 305  Q
    |||||||||||| || |  ||| ||||||||||||||||||||||| |||||||||    
T  597 gtttaaattaaaaaatttaataaggtctatggtggaccactcttaaggttggtcca 652  T

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Target: scaffold0118 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 43489 - 43545
Alignment:
Q  250 gtttaaattaaagaaatccatagggtctatggtggaccactcttaatgttggtccac 306  Q
    ||||||||||||  |||  ||||| |||||||||||||||||||||  |||||||||    
T  43489 gtttaaattaaaataattaataggatctatggtggaccactcttaagattggtccac 43545  T

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Target: scaffold0077 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 54099 - 54155
Alignment:
Q  250 gtttaaattaaagaaatccatagggtctatggtggaccactcttaatgttggtccac 306  Q
    ||||||||||||  |||  ||||| |||||||||||||||| |||| ||||||||||    
T  54099 gtttaaattaaaataattaataggatctatggtggaccacttttaaggttggtccac 54155  T

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