View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10236_high_7 (Length: 328)
Name: NF10236_high_7
Description: NF10236
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10236_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 17 - 310
Target Start/End: Complemental strand, 26277421 - 26277135
Alignment:
| Q |
17 |
cctgtgaggaaggatccagaaaaccgaagaggaagaaatctgcctactaggacgaggggccagctggaaaagcgcacctatacgtaagtcaaaactggaa |
116 |
Q |
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| T |
26277421 |
cctgtgaggaaggatccagaaaaccgaagaggaagaaatctgcctactgggacgaggggccagctggaaaagcgcacctatacgtaagtcaaaactggaa |
26277322 |
T |
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| Q |
117 |
gtgtttcttgctccaaacatcatagcagcgctacactttacctcagtcgtaactgtaccaataagctgatacatttaggactctttatcactgaagtacc |
216 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26277321 |
gtgtttcttgctccaaacatcatagcagtgctacactttacctcagtcgtaactgtaccaataagctgatacatttaggactctttatcactgaagtacc |
26277222 |
T |
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| Q |
217 |
tgcggtttcgctcaatccaaatctgccatataacatataacatgggagactgcagagatcagaacctgatgagtaaatctgctacccttatcaa |
310 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26277221 |
tgcggtttcgctcaatccaaatctgccatata-------acatgggagactgcagagatcagaacctgatgagtaaatctgctacccttatcaa |
26277135 |
T |
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