View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10237_low_10 (Length: 312)
Name: NF10237_low_10
Description: NF10237
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10237_low_10 |
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Alignment Details
Target: chr4 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 73 - 301
Target Start/End: Original strand, 42690779 - 42691008
Alignment:
| Q |
73 |
aacacaaagtaggatcttgtggaaaa-aagacaaagtaggaaatttgaaaaccaaatcctcttctctcccaaatacgtccacacgttagattgccattat |
171 |
Q |
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| T |
42690779 |
aacacaaagtaggatcttgtggaaaaaaagacaaagtaggaaatttgaaaaccaaatcctcttctctcccaaatacgtccacacgttagattgccattat |
42690878 |
T |
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| Q |
172 |
cttatccctcaaataagaggccatcgcgttcctctccactcaatgctatcagtatcacaccttcttcttcccaccaatcacagcaaatacaaaacaaaga |
271 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42690879 |
cttatccctcaaataagaggccatcgtgttcctctccactcaatgctatcagtatcacaccttcttcttcccaccaatcacagcaaatacaaaacaaaga |
42690978 |
T |
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| Q |
272 |
aacgcaaacaaaacactctcttcatttcat |
301 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
42690979 |
aacgcaaacaaaacactctcttcatttcat |
42691008 |
T |
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