View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10237_low_16 (Length: 253)
Name: NF10237_low_16
Description: NF10237
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10237_low_16 |
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Alignment Details
Target: chr8 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 4963755 - 4963510
Alignment:
| Q |
1 |
cttgagggaacttgcttcggtgtggagcctggataccttcacaacacttctatcaaaatatacccagacatcatcccgactgcccggtaatcttaacttg |
100 |
Q |
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| T |
4963755 |
cttgagggaacttgcttcggcgtggagcctggataccttcacaacacttctatcaaaatatacccagacatcatcccgactgcccggtaatcttaacttg |
4963656 |
T |
|
| Q |
101 |
atcatttttacaatgagattttttaagtcg----ttaaagttttgcctttggctaagaaaattgagtttgtaaatgtttttaacgatttaatttaaagcg |
196 |
Q |
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||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
4963655 |
atcatttttacaatgggattttttaagtcgttaattaaagttttgcctttggctaagaaaattgagtttgaaaatgtttttaacgatttaatttaaagcg |
4963556 |
T |
|
| Q |
197 |
catgaaaatatctaccttgagttgtccttactgatgaatctgtgct |
242 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
4963555 |
catgaaaatatctaccttgagttgtcctggctgatgaatctgtgct |
4963510 |
T |
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