View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1023_low_14 (Length: 250)
Name: NF1023_low_14
Description: NF1023
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1023_low_14 |
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Alignment Details
Target: chr1 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 42632067 - 42632288
Alignment:
| Q |
1 |
agaccaattagtgaattaggcccacttgctttgcaagaacttatgcctgagattcctctctgggtgaagacacctgattatgaaagagttagtttgtttt |
100 |
Q |
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| T |
42632067 |
agaccaattagtgaattaggcccgcttgctttgcaagaacttatgcctgagattcctctctgggtgaagacacctgattatgaaagagttagtttttttt |
42632166 |
T |
|
| Q |
101 |
ttcaatattttgtttataagttctgaacttcaaattttgatgattttactgtgttattgatatttgcatgtttcatcaggttgattggttgaacaagttt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42632167 |
ttcaatattttgtttataagttctgaacttcaaattttgatgattttactgtgttattgatatttgcatgtttcatcaggttgattggttgaacaagttt |
42632266 |
T |
|
| Q |
201 |
ttatttgatatgtggcctttct |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
42632267 |
ttatttgatatgtggcctttct |
42632288 |
T |
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