View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10240_low_2 (Length: 355)

Name: NF10240_low_2
Description: NF10240
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10240_low_2
NF10240_low_2
[»] chr2 (55 HSPs)
chr2 (196-346)||(19456511-19456661)
chr2 (196-346)||(21703254-21703404)
chr2 (196-346)||(34303393-34303543)
chr2 (13-156)||(27118506-27118649)
chr2 (199-346)||(27392973-27393120)
chr2 (196-346)||(3784655-3784805)
chr2 (196-346)||(16163600-16163750)
chr2 (196-346)||(34157012-34157162)
chr2 (13-146)||(3784472-3784605)
chr2 (13-146)||(34156829-34156962)
chr2 (13-137)||(34303602-34303726)
chr2 (196-346)||(27118689-27118839)
chr2 (14-156)||(31891608-31891750)
chr2 (13-146)||(16163417-16163550)
chr2 (22-156)||(19456701-19456835)
chr2 (196-318)||(31891446-31891568)
chr2 (22-156)||(21703444-21703578)
chr2 (196-318)||(28882215-28882337)
chr2 (196-318)||(12655543-12655665)
chr2 (196-318)||(23128684-23128806)
chr2 (196-346)||(27434534-27434684)
chr2 (196-339)||(11635283-11635426)
chr2 (196-318)||(20837919-20838041)
chr2 (196-318)||(21677300-21677422)
chr2 (196-339)||(11641472-11641615)
chr2 (196-339)||(22926125-22926268)
chr2 (196-339)||(34279450-34279593)
chr2 (199-346)||(40233515-40233662)
chr2 (37-137)||(27434746-27434846)
chr2 (196-339)||(34286355-34286498)
chr2 (196-339)||(34291415-34291558)
chr2 (18-156)||(27392813-27392951)
chr2 (196-318)||(34861681-34861803)
chr2 (196-318)||(37686027-37686149)
chr2 (196-318)||(37701292-37701414)
chr2 (196-318)||(37925494-37925616)
chr2 (196-318)||(31876282-31876404)
chr2 (197-339)||(37375163-37375305)
chr2 (199-296)||(13936684-13936781)
chr2 (37-137)||(23128868-23128968)
chr2 (196-318)||(16829456-16829578)
chr2 (196-318)||(16891903-16892025)
chr2 (196-318)||(32049799-32049921)
chr2 (196-318)||(39890075-39890197)
chr2 (199-296)||(12716742-12716839)
chr2 (199-296)||(27777226-27777323)
chr2 (199-296)||(27803711-27803808)
chr2 (199-296)||(27816984-27817081)
chr2 (199-296)||(39051962-39052059)
chr2 (37-137)||(12655381-12655481)
chr2 (37-137)||(28882053-28882153)
chr2 (205-339)||(260850-260984)
chr2 (39-137)||(20837759-20837857)
chr2 (199-296)||(9350122-9350219)
chr2 (199-296)||(12586814-12586911)
[»] chr1 (10 HSPs)
chr1 (196-339)||(20461085-20461228)
chr1 (196-346)||(16208132-16208282)
chr1 (196-346)||(20340436-20340586)
chr1 (13-156)||(20340626-20340769)
chr1 (196-346)||(28151866-28152016)
chr1 (22-156)||(20460935-20461069)
chr1 (196-339)||(41793416-41793559)
chr1 (22-156)||(16208319-16208453)
chr1 (196-318)||(28584985-28585107)
chr1 (196-318)||(10962674-10962796)
[»] chr7 (42 HSPs)
chr7 (196-346)||(16449985-16450135)
chr7 (196-346)||(16041329-16041479)
chr7 (196-346)||(26484700-26484850)
chr7 (196-346)||(2108992-2109142)
chr7 (196-346)||(2775365-2775515)
chr7 (196-346)||(31088451-31088601)
chr7 (196-346)||(39211010-39211160)
chr7 (13-146)||(31088651-31088784)
chr7 (13-146)||(45733283-45733416)
chr7 (196-346)||(45733466-45733616)
chr7 (196-338)||(18540805-18540947)
chr7 (22-156)||(16041155-16041289)
chr7 (22-153)||(16450178-16450309)
chr7 (196-318)||(11424791-11424913)
chr7 (196-339)||(5127998-5128141)
chr7 (196-318)||(10916883-10917005)
chr7 (196-318)||(16503395-16503517)
chr7 (196-318)||(16518431-16518553)
chr7 (196-339)||(5147334-5147477)
chr7 (196-318)||(2154579-2154701)
chr7 (196-339)||(16736454-16736597)
chr7 (196-339)||(16751508-16751651)
chr7 (196-339)||(17523538-17523681)
chr7 (196-339)||(17529534-17529677)
chr7 (196-318)||(4145138-4145260)
chr7 (196-318)||(9618657-9618779)
chr7 (196-318)||(26275109-26275231)
chr7 (196-318)||(26319884-26320006)
chr7 (196-318)||(45387349-45387471)
chr7 (37-137)||(16503579-16503679)
chr7 (37-137)||(16518615-16518715)
chr7 (199-318)||(3445315-3445434)
chr7 (196-339)||(26435263-26435406)
chr7 (196-318)||(26669929-26670051)
chr7 (197-318)||(31564405-31564526)
chr7 (199-318)||(26537885-26538004)
chr7 (19-137)||(5127818-5127936)
chr7 (205-318)||(11441587-11441700)
chr7 (197-318)||(31124927-31125048)
chr7 (196-338)||(5159525-5159667)
chr7 (64-137)||(10917064-10917137)
chr7 (37-137)||(2154417-2154517)
[»] scaffold0558 (1 HSPs)
scaffold0558 (196-346)||(129-279)
[»] chr4 (33 HSPs)
chr4 (196-346)||(15227890-15228040)
chr4 (196-346)||(15285029-15285179)
chr4 (196-346)||(1900277-1900427)
chr4 (196-346)||(24460706-24460856)
chr4 (199-346)||(15391439-15391586)
chr4 (13-146)||(24460906-24461039)
chr4 (196-346)||(14235626-14235776)
chr4 (22-156)||(1900103-1900237)
chr4 (22-156)||(15227716-15227850)
chr4 (22-156)||(15285219-15285353)
chr4 (196-339)||(17014020-17014163)
chr4 (196-339)||(14763412-14763555)
chr4 (22-156)||(14235819-14235953)
chr4 (196-318)||(24592443-24592565)
chr4 (196-318)||(14098561-14098683)
chr4 (196-318)||(14665038-14665160)
chr4 (196-339)||(5005893-5006036)
chr4 (196-339)||(6569873-6570016)
chr4 (196-318)||(27163446-27163568)
chr4 (197-318)||(18800742-18800863)
chr4 (199-318)||(30753777-30753896)
chr4 (196-318)||(31126647-31126769)
chr4 (199-339)||(33673906-33674046)
chr4 (197-339)||(36344623-36344765)
chr4 (196-318)||(40105767-40105889)
chr4 (19-137)||(14664858-14664976)
chr4 (18-132)||(15391650-15391764)
chr4 (196-338)||(24112682-24112824)
chr4 (19-137)||(24592624-24592742)
chr4 (196-338)||(34189069-34189211)
chr4 (197-339)||(54833408-54833550)
chr4 (199-296)||(39850661-39850758)
chr4 (37-137)||(17013858-17013958)
[»] scaffold0124 (4 HSPs)
scaffold0124 (196-346)||(20393-20543)
scaffold0124 (22-156)||(20240-20374)
scaffold0124 (37-137)||(30296-30396)
scaffold0124 (271-318)||(30532-30579)
[»] chr3 (76 HSPs)
chr3 (196-346)||(16626648-16626798)
chr3 (196-346)||(18530354-18530504)
chr3 (196-346)||(4625910-4626060)
chr3 (196-346)||(31034259-31034409)
chr3 (196-346)||(32292718-32292868)
chr3 (13-146)||(17994126-17994259)
chr3 (196-346)||(17993926-17994076)
chr3 (13-137)||(4625727-4625851)
chr3 (196-346)||(5652353-5652503)
chr3 (22-156)||(16626838-16626972)
chr3 (13-146)||(5652170-5652303)
chr3 (22-156)||(18530186-18530320)
chr3 (13-134)||(5713007-5713128)
chr3 (13-134)||(5723917-5724038)
chr3 (13-134)||(5757439-5757560)
chr3 (13-134)||(5768330-5768451)
chr3 (196-318)||(15892876-15892998)
chr3 (196-318)||(8295938-8296060)
chr3 (196-318)||(8301437-8301559)
chr3 (196-318)||(18330635-18330757)
chr3 (196-339)||(4721597-4721740)
chr3 (196-339)||(22387727-22387870)
chr3 (196-318)||(4796823-4796945)
chr3 (196-318)||(15741264-15741386)
chr3 (196-318)||(17985126-17985248)
chr3 (196-318)||(18051228-18051350)
chr3 (197-318)||(6542632-6542753)
chr3 (196-339)||(5609471-5609614)
chr3 (196-339)||(6192282-6192425)
chr3 (196-339)||(18277201-18277344)
chr3 (196-339)||(18292502-18292645)
chr3 (196-339)||(18307803-18307946)
chr3 (196-339)||(28339268-28339411)
chr3 (196-339)||(29148904-29149047)
chr3 (196-339)||(31964622-31964765)
chr3 (196-339)||(50134220-50134363)
chr3 (196-318)||(35880732-35880854)
chr3 (196-339)||(4416885-4417028)
chr3 (199-318)||(5713196-5713315)
chr3 (199-318)||(5724106-5724225)
chr3 (199-318)||(5757252-5757371)
chr3 (199-318)||(5768143-5768262)
chr3 (196-339)||(10396099-10396242)
chr3 (196-339)||(28116103-28116246)
chr3 (199-318)||(36997247-36997366)
chr3 (196-318)||(7996528-7996650)
chr3 (196-318)||(10643036-10643158)
chr3 (196-318)||(47023419-47023541)
chr3 (196-339)||(7073178-7073321)
chr3 (196-339)||(21674659-21674802)
chr3 (19-137)||(15893060-15893178)
chr3 (199-339)||(11110498-11110638)
chr3 (196-339)||(4346836-4346979)
chr3 (19-137)||(8301618-8301736)
chr3 (197-318)||(18242706-18242827)
chr3 (198-318)||(5466953-5467073)
chr3 (37-137)||(18051066-18051166)
chr3 (199-339)||(48465896-48466036)
chr3 (196-339)||(22871005-22871148)
chr3 (196-339)||(22886064-22886207)
chr3 (196-339)||(28021241-28021384)
chr3 (259-318)||(51782052-51782111)
chr3 (196-338)||(4893176-4893318)
chr3 (19-137)||(35880552-35880670)
chr3 (205-318)||(5013687-5013800)
chr3 (197-318)||(5596527-5596648)
chr3 (199-296)||(20577039-20577136)
chr3 (199-296)||(29665162-29665259)
chr3 (37-137)||(4797007-4797107)
chr3 (37-137)||(15741436-15741536)
chr3 (197-296)||(20066010-20066109)
chr3 (259-310)||(51797141-51797192)
chr3 (205-339)||(8211713-8211847)
chr3 (196-318)||(18225157-18225279)
chr3 (196-338)||(32439120-32439262)
chr3 (37-137)||(8295779-8295879)
[»] scaffold0260 (2 HSPs)
scaffold0260 (196-346)||(2759-2909)
scaffold0260 (13-156)||(2949-3092)
[»] chr5 (64 HSPs)
chr5 (196-346)||(22888484-22888634)
chr5 (196-346)||(25199043-25199193)
chr5 (196-346)||(23892220-23892370)
chr5 (196-346)||(13184646-13184796)
chr5 (196-346)||(33877261-33877411)
chr5 (13-146)||(13184846-13184979)
chr5 (13-146)||(13440692-13440825)
chr5 (13-146)||(33877078-33877211)
chr5 (196-346)||(11325808-11325958)
chr5 (196-346)||(13440492-13440642)
chr5 (196-346)||(29889080-29889230)
chr5 (13-156)||(11325625-11325768)
chr5 (22-156)||(22888310-22888444)
chr5 (37-156)||(25198884-25199003)
chr5 (196-339)||(23752455-23752598)
chr5 (37-156)||(23892058-23892177)
chr5 (196-318)||(11549368-11549490)
chr5 (196-318)||(23718014-23718136)
chr5 (196-318)||(30934647-30934769)
chr5 (196-318)||(24688183-24688305)
chr5 (196-318)||(24970032-24970154)
chr5 (196-339)||(33777501-33777644)
chr5 (196-318)||(2511065-2511187)
chr5 (196-318)||(8665501-8665623)
chr5 (196-318)||(15758883-15759005)
chr5 (196-339)||(6874319-6874462)
chr5 (196-339)||(9548548-9548691)
chr5 (196-339)||(22999119-22999262)
chr5 (196-318)||(26480406-26480528)
chr5 (197-339)||(37671488-37671630)
chr5 (196-339)||(15658765-15658908)
chr5 (196-339)||(41674723-41674866)
chr5 (196-318)||(5637924-5638046)
chr5 (196-318)||(9317465-9317587)
chr5 (196-318)||(12132169-12132291)
chr5 (197-339)||(18500735-18500877)
chr5 (197-339)||(28649250-28649392)
chr5 (196-318)||(30152032-30152154)
chr5 (196-318)||(30168483-30168605)
chr5 (196-318)||(34616532-34616654)
chr5 (205-318)||(31431463-31431576)
chr5 (37-137)||(24969876-24969976)
chr5 (199-318)||(31826433-31826552)
chr5 (196-318)||(18375438-18375560)
chr5 (196-318)||(28959812-28959934)
chr5 (197-339)||(37770992-37771134)
chr5 (197-318)||(37358669-37358790)
chr5 (196-339)||(32599477-32599620)
chr5 (197-318)||(3789556-3789677)
chr5 (197-318)||(37754995-37755116)
chr5 (37-137)||(24688367-24688467)
chr5 (37-137)||(30934488-30934588)
chr5 (199-339)||(43078269-43078409)
chr5 (79-137)||(11549248-11549306)
chr5 (196-338)||(33292539-33292681)
chr5 (196-318)||(33516370-33516492)
chr5 (19-137)||(33777321-33777439)
chr5 (199-296)||(24681457-24681554)
chr5 (199-296)||(24723984-24724081)
chr5 (199-296)||(40473597-40473694)
chr5 (37-137)||(23718198-23718298)
chr5 (37-137)||(23752660-23752760)
chr5 (197-338)||(13324835-13324976)
chr5 (37-137)||(22999324-22999424)
[»] chr6 (64 HSPs)
chr6 (196-346)||(22456978-22457128)
chr6 (196-346)||(22477317-22477467)
chr6 (196-346)||(27290414-27290564)
chr6 (196-346)||(8892354-8892504)
chr6 (196-346)||(8903589-8903739)
chr6 (196-346)||(13522117-13522267)
chr6 (196-346)||(14143329-14143479)
chr6 (196-346)||(26787946-26788096)
chr6 (196-346)||(27196319-27196469)
chr6 (196-346)||(27252771-27252921)
chr6 (196-346)||(33374300-33374450)
chr6 (13-146)||(13522317-13522450)
chr6 (13-146)||(33374500-33374633)
chr6 (196-346)||(28162659-28162809)
chr6 (13-156)||(8892544-8892687)
chr6 (13-156)||(8903779-8903922)
chr6 (14-156)||(28162477-28162619)
chr6 (197-344)||(20160704-20160851)
chr6 (197-344)||(22171980-22172127)
chr6 (22-137)||(22477529-22477644)
chr6 (196-346)||(22934924-22935074)
chr6 (196-346)||(23857369-23857519)
chr6 (199-346)||(27272624-27272771)
chr6 (196-339)||(26918382-26918525)
chr6 (196-318)||(13299023-13299145)
chr6 (196-318)||(24304690-24304812)
chr6 (196-318)||(26989003-26989125)
chr6 (196-339)||(16749856-16749999)
chr6 (196-318)||(15424389-15424511)
chr6 (196-318)||(24863719-24863841)
chr6 (196-318)||(27000075-27000197)
chr6 (197-318)||(4525289-4525410)
chr6 (196-339)||(29549477-29549620)
chr6 (197-318)||(4773009-4773130)
chr6 (199-318)||(3696086-3696205)
chr6 (81-143)||(20160588-20160650)
chr6 (81-143)||(22172181-22172243)
chr6 (196-318)||(29573015-29573137)
chr6 (205-318)||(4545847-4545960)
chr6 (205-318)||(4724206-4724319)
chr6 (197-318)||(4757767-4757888)
chr6 (205-318)||(28207465-28207578)
chr6 (199-339)||(16674144-16674284)
chr6 (199-339)||(34463397-34463537)
chr6 (19-137)||(24304874-24304992)
chr6 (197-339)||(27007730-27007872)
chr6 (197-339)||(27044390-27044532)
chr6 (37-134)||(22935136-22935233)
chr6 (37-134)||(23857581-23857678)
chr6 (197-318)||(27485132-27485253)
chr6 (37-137)||(13299207-13299307)
chr6 (37-137)||(15424573-15424673)
chr6 (37-137)||(24863557-24863657)
chr6 (196-318)||(26777687-26777809)
chr6 (196-318)||(30558088-30558210)
chr6 (197-318)||(26116482-26116603)
chr6 (197-318)||(27360064-27360185)
chr6 (197-318)||(27450407-27450528)
chr6 (197-318)||(29501418-29501539)
chr6 (37-137)||(26988841-26988941)
chr6 (37-137)||(26999913-27000013)
chr6 (38-137)||(16749695-16749794)
chr6 (197-296)||(17025280-17025379)
chr6 (19-134)||(26918202-26918317)
[»] chr8 (31 HSPs)
chr8 (196-346)||(44563106-44563256)
chr8 (13-146)||(19659299-19659432)
chr8 (13-146)||(9354444-9354577)
chr8 (196-346)||(9354627-9354777)
chr8 (196-346)||(19659099-19659249)
chr8 (13-137)||(44562923-44563047)
chr8 (199-346)||(22080938-22081085)
chr8 (196-346)||(33244670-33244820)
chr8 (196-346)||(16283454-16283604)
chr8 (196-318)||(16277559-16277681)
chr8 (196-318)||(2137347-2137469)
chr8 (196-318)||(19688103-19688225)
chr8 (196-318)||(27608993-27609115)
chr8 (196-339)||(31354529-31354672)
chr8 (196-318)||(14557629-14557751)
chr8 (196-318)||(19208448-19208570)
chr8 (196-318)||(31489838-31489960)
chr8 (196-339)||(19674446-19674589)
chr8 (196-318)||(28362043-28362165)
chr8 (197-318)||(3329595-3329716)
chr8 (196-339)||(18710591-18710734)
chr8 (18-156)||(22081125-22081263)
chr8 (37-137)||(16283292-16283392)
chr8 (197-318)||(12092812-12092933)
chr8 (37-137)||(16277397-16277497)
chr8 (197-339)||(19286468-19286610)
chr8 (19-137)||(19687923-19688041)
chr8 (197-319)||(29829328-29829450)
chr8 (37-137)||(2137531-2137631)
chr8 (37-137)||(14557470-14557570)
chr8 (79-137)||(27609177-27609235)
[»] scaffold0109 (2 HSPs)
scaffold0109 (199-346)||(21569-21716)
scaffold0109 (18-156)||(21391-21529)
[»] scaffold0415 (2 HSPs)
scaffold0415 (261-346)||(2018-2103)
scaffold0415 (259-339)||(6080-6160)
[»] scaffold0143 (2 HSPs)
scaffold0143 (196-318)||(27297-27419)
scaffold0143 (37-137)||(27135-27235)
[»] scaffold0089 (5 HSPs)
scaffold0089 (196-318)||(29768-29890)
scaffold0089 (196-318)||(40198-40320)
scaffold0089 (196-318)||(47114-47236)
scaffold0089 (37-137)||(29606-29706)
scaffold0089 (37-134)||(40385-40482)
[»] scaffold0159 (2 HSPs)
scaffold0159 (196-318)||(9195-9317)
scaffold0159 (196-318)||(20020-20142)
[»] scaffold0029 (2 HSPs)
scaffold0029 (196-318)||(258-381)
scaffold0029 (19-137)||(443-561)
[»] scaffold0350 (1 HSPs)
scaffold0350 (196-318)||(7368-7490)
[»] scaffold0144 (1 HSPs)
scaffold0144 (196-311)||(26338-26453)
[»] scaffold0237 (1 HSPs)
scaffold0237 (196-318)||(15059-15181)
[»] scaffold0038 (1 HSPs)
scaffold0038 (205-318)||(7963-8076)
[»] scaffold0336 (1 HSPs)
scaffold0336 (196-339)||(9571-9714)


Alignment Details
Target: chr2 (Bit Score: 131; Significance: 7e-68; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 196 - 346
Target Start/End: Complemental strand, 19456661 - 19456511
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19456661 gctagacctacctttcctccgataccaatgctatatgccgagttactcccgactctacttctcatagggcactgcacaaccagacagggcaagcctccac 19456562  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || ||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  19456561 ctgatccgttgcctcccaggttccgttctgacctcaagtgtgatttccatc 19456511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 196 - 346
Target Start/End: Complemental strand, 21703404 - 21703254
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| || ||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21703404 gctagacctaccttccctccgataccaatgttgtatgctgagttactcccgactctacttctcagagggcactgcacaaccagacaggacaagcctccac 21703305  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || ||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  21703304 ctgatccgttgcctcccaggttccgttctgacctcaagtgtgatttccatc 21703254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 196 - 346
Target Start/End: Complemental strand, 34303543 - 34303393
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||| |||||||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  34303543 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 34303444  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || |||||| |||||||| ||||| ||| ||||||||||||||| ||||||    
T  34303443 ctgatccgtcgcctcccaagttccgttcggacctcaagtgtgatttccatc 34303393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 27118506 - 27118649
Alignment:
Q  13 atggacatcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccat 112  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||| ||||||||||||||||||||||||||| | ||||    
T  27118506 atggacatcaatgctgctcagctacctccgtcgtacccgcatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccat 27118605  T
Q  113 cgggtctacctcaggtacccgttaacgccatcgtttagcaaatg 156  Q
    |||||| |||||||||||||||||| ||| ||||| ||| ||||    
T  27118606 cgggtcaacctcaggtacccgttaatgccgtcgttcagcgaatg 27118649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 199 - 346
Target Start/End: Original strand, 27392973 - 27393120
Alignment:
Q  199 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 298  Q
    |||||||| |||||||||||||||||| | ||||||||| | ||||||||| | ||||||| |||||||||||||||||| |||||||||||||||||||    
T  27392973 agacctacctttcctccgataccaatgatgtatgccgagctgctcccgactttgcttctcaaagggcactgcacaaccaggcagggcaagcctccaccta 27393072  T
Q  299 atccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    | ||||||||||||||||||||||||||||||||||| ||| ||||||    
T  27393073 acccgttgcctcccaggttccattctgacctcaagtgcgatttccatc 27393120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 196 - 346
Target Start/End: Original strand, 3784655 - 3784805
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||| |||||||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3784655 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 3784754  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || |||| | |||||||| ||||| ||| ||||||||||||||| ||||||    
T  3784755 ctgatccatcgcctcccaagttccgttcggacctcaagtgtgatttccatc 3784805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 196 - 346
Target Start/End: Original strand, 16163600 - 16163750
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||| |||||||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16163600 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 16163699  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || |||| | |||||||| ||||| ||| ||||||||||||||| ||||||    
T  16163700 ctgatccatcgcctcccaagttccgttcggacctcaagtgtgatttccatc 16163750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 196 - 346
Target Start/End: Original strand, 34157012 - 34157162
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||| |||||||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  34157012 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 34157111  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || |||| | |||||||| ||||| ||| ||||||||||||||| ||||||    
T  34157112 ctgatccatcgcctcccaagttccgttcggacctcaagtgtgatttccatc 34157162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 13 - 146
Target Start/End: Original strand, 3784472 - 3784605
Alignment:
Q  13 atggacatcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccat 112  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||| ||||||||||||||||||||||||||| | ||||    
T  3784472 atggacatcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccat 3784571  T
Q  113 cgggtctacctcaggtacccgttaacgccatcgt 146  Q
    |||||| |||||||||||||||||| ||| ||||    
T  3784572 cgggtcaacctcaggtacccgttaatgccgtcgt 3784605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 13 - 146
Target Start/End: Original strand, 34156829 - 34156962
Alignment:
Q  13 atggacatcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccat 112  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||| ||||||||||||||||||||||||||| | ||||    
T  34156829 atggacatcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccat 34156928  T
Q  113 cgggtctacctcaggtacccgttaacgccatcgt 146  Q
    |||||| |||||||||||||||||| ||| ||||    
T  34156929 cgggtcaacctcaggtacccgttaatgccgtcgt 34156962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 34303726 - 34303602
Alignment:
Q  13 atggacatcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccat 112  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||| ||||||||||||||||||||||||||| | ||||    
T  34303726 atggacatcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccat 34303627  T
Q  113 cgggtctacctcaggtacccgttaa 137  Q
    |||||| ||||||||||||||||||    
T  34303626 cgggtcaacctcaggtacccgttaa 34303602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 196 - 346
Target Start/End: Original strand, 27118689 - 27118839
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| || ||||||||||| ||| | ||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27118689 gctagacctaccttccctccgataccgatgttgtatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 27118788  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || |||||| |||||||| ||||| ||| ||||||||||||||| ||||||    
T  27118789 ctgatccgtcgcctcccaagttccgttcggacctcaagtgtgatttccatc 27118839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 31891750 - 31891608
Alignment:
Q  14 tggacatcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatc 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | || ||||||||||||||||||||||||||| | |||||    
T  31891750 tggacatcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagcatcctttctttccaccattctatcatcagtatcctttgccatc 31891651  T
Q  114 gggtctacctcaggtacccgttaacgccatcgtttagcaaatg 156  Q
    ||| | |||||||||||||||||| ||| ||||| ||| ||||    
T  31891650 gggacaacctcaggtacccgttaatgccgtcgttcagcgaatg 31891608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 13 - 146
Target Start/End: Original strand, 16163417 - 16163550
Alignment:
Q  13 atggacatcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccat 112  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||| |||||||||||||||||||||||| || | ||||    
T  16163417 atggacatcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtattctttgccat 16163516  T
Q  113 cgggtctacctcaggtacccgttaacgccatcgt 146  Q
    |||||| |||||||||||||||||| ||| ||||    
T  16163517 cgggtcaacctcaggtacccgttaatgccgtcgt 16163550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 22 - 156
Target Start/End: Complemental strand, 19456835 - 19456701
Alignment:
Q  22 aatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctac 121  Q
    |||||||| ||| |||||||||||||||| ||||||||||||| ||||| | | || |||||||||||||||||||||||||||||||||||||||| ||    
T  19456835 aatgctgcccagttacctccgtcgtacccatatgcgcaatactttcagcatcctttctttccaccattctatcatcagtatcctctaccatcgggtcaac 19456736  T
Q  122 ctcaggtacccgttaacgccatcgtttagcaaatg 156  Q
    ||||||| |||||||| ||||||||||||||||||    
T  19456735 ctcaggtgcccgttaatgccatcgtttagcaaatg 19456701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 31891568 - 31891446
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||| |||||||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  31891568 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 31891469  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  31891468 ctgatccgttgcctccaaggttc 31891446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 22 - 156
Target Start/End: Complemental strand, 21703578 - 21703444
Alignment:
Q  22 aatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctac 121  Q
    ||||||||  || |||||||||||||||| ||||||| ||||||||||| | |||| ||||||||||||||||||||||||||| | |||||||||| ||    
T  21703578 aatgctgcctagttacctccgtcgtacccatatgcgccatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 21703479  T
Q  122 ctcaggtacccgttaacgccatcgtttagcaaatg 156  Q
    |||||||||||||||| ||| ||||| | ||||||    
T  21703478 ctcaggtacccgttaatgccgtcgttcaacaaatg 21703444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 28882215 - 28882337
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  28882215 gctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggcaagcccccac 28882314  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||||||||||    
T  28882315 ctgatccgttgcctcccaggttc 28882337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 12655543 - 12655665
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  12655543 gctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggcaagcccccac 12655642  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  12655643 ctgatccgttgcctccaaggttc 12655665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 23128806 - 23128684
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || |||||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  23128806 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggcaagcccccac 23128707  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  23128706 ctgatccgttgcctccaaggttc 23128684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 196 - 346
Target Start/End: Complemental strand, 27434684 - 27434534
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || ||| || |||| |  |||||||| || |||||||||||||||||||| ||||    
T  27434684 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccggctttactccatagagggcattgtacaaccagacagggcaagcccccac 27434585  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || ||||||||||||||| ||||   || |||||||| |||||| ||||||    
T  27434584 ctgatccgttgcctcccaagttcaggtccgacctcaaatgtgatttccatc 27434534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 196 - 339
Target Start/End: Complemental strand, 11635426 - 11635283
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  11635426 gctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggcaagcccccac 11635327  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  11635326 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 11635283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 20837919 - 20838041
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  20837919 gctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccatagagggcattgtacaactagacagggcaagcccccac 20838018  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||| ||||||||||||||||    
T  20838019 ctgatctgttgcctcccaggttc 20838041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 21677422 - 21677300
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||||||||    
T  21677422 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggcaagcctccac 21677323  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  21677322 ctgatccgttgcctccaaggttc 21677300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 196 - 339
Target Start/End: Complemental strand, 11641615 - 11641472
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||  ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  11641615 gctagacctactttccctccgatacagatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggcaagcccccac 11641516  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  11641515 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 11641472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 196 - 339
Target Start/End: Complemental strand, 22926268 - 22926125
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  22926268 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggcaagccaccac 22926169  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  22926168 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 22926125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 196 - 339
Target Start/End: Original strand, 34279450 - 34279593
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  34279450 gctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggtaagcccccac 34279549  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  34279550 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 34279593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 199 - 346
Target Start/End: Original strand, 40233515 - 40233662
Alignment:
Q  199 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 298  Q
    ||||| ||||||||||| ||||||||| | ||||| ||| | || || ||| |||| |  ||||| |||||||| || |||||||| ||||| ||||||     
T  40233515 agaccaacttttcctcctataccaatgttgtatgctgagcttcttccaactttactccagagaggacactgcacgactagacagggtaagcccccacctg 40233614  T
Q  299 atccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    ||||||||||||| |||||||  ||||||||||| |||||| ||||||    
T  40233615 atccgttgcctccaaggttccggtctgacctcaaatgtgatttccatc 40233662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 27434846 - 27434746
Alignment:
Q  37 cctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgtta 136  Q
    |||||||||||||| |||||||  |||||||||| | | || ||||||||||||||||||||||| ||| | ||| |||||| |||||| ||||||||||    
T  27434846 cctccgtcgtacccatatgcgccgtactctcagcatcctttctttccaccattctatcatcagtaccctttgccaccgggtcaacctcaagtacccgtta 27434747  T
Q  137 a 137  Q
    |    
T  27434746 a 27434746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 339
Target Start/End: Original strand, 34286355 - 34286498
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||| ||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  34286355 gctagacctactttccctccaataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggtaagcccccac 34286454  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  34286455 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 34286498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 339
Target Start/End: Original strand, 34291415 - 34291558
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||| ||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  34291415 gctagacctactttccctccaataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggtaagcccccac 34291514  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  34291515 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 34291558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 156
Target Start/End: Original strand, 27392813 - 27392951
Alignment:
Q  18 catcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggt 117  Q
    |||| |||||||||||||||||||  |||||| |||   |||||||||||||| | | || || |||||||||||||| |||||||| | |||  |||||    
T  27392813 catcgatgctgctcagctacctccaccgtaccagtacatgcaatactctcagcatcctttcttcccaccattctatcaccagtatccgccaccgccgggt 27392912  T
Q  118 ctacctcaggtacccgttaacgccatcgtttagcaaatg 156  Q
    | ||||||||||||||| || ||||| | | ||||||||    
T  27392913 caacctcaggtacccgtcaatgccattgctcagcaaatg 27392951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 34861681 - 34861803
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  34861681 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 34861780  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  34861781 ctgatccgttgcctccaaggttc 34861803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 37686149 - 37686027
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  37686149 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 37686050  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  37686049 ctgatccgttgcctccaaggttc 37686027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 37701414 - 37701292
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  37701414 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 37701315  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  37701314 ctgatccgttgcctccaaggttc 37701292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 37925494 - 37925616
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||||||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  37925494 gctaggcctactttccctccgataccaatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 37925593  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    |  | ||||||||||| ||||||    
T  37925594 ccgacccgttgcctccaaggttc 37925616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 31876282 - 31876404
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||||||||| ||||||||| | || || ||  | || || |||||||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  31876282 gctaggcctacttttcctcctataccaatgttgtacgcggaacttcttccaactctactccagagagggcattgtacaactagacagggtaagcccccac 31876381  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  31876382 ctgatccgttgcctccaaggttc 31876404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 197 - 339
Target Start/End: Original strand, 37375163 - 37375305
Alignment:
Q  197 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||||| ||||||||||| ||||| ||| | ||||| ||| | || || ||| |||| |  ||||| |||||||| || |||||||| ||||| |||||    
T  37375163 ctagaccaacttttcctcctatacctatgttgtatgcagagcttcttccaactttactccagagaggacactgcacgactagacagggtaagcccccacc 37375262  T
Q  297 taatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    | ||||||||||||| ||||||   ||||| ||||| ||||||    
T  37375263 tgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 37375305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 296
Target Start/End: Complemental strand, 13936781 - 13936684
Alignment:
Q  199 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  ||||| |||||||| || || |||||||||||||||||    
T  13936781 agacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccacc 13936684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 23128968 - 23128868
Alignment:
Q  37 cctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgtta 136  Q
    |||||||| ||||| |||||||  || ||||||| | | || ||||| ||||| ||||||||||| ||||| ||| |||||| |||||| ||||||||||    
T  23128968 cctccgtcatacccatatgcgccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtta 23128869  T
Q  137 a 137  Q
    |    
T  23128868 a 23128868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 16829578 - 16829456
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||||||||| ||||||||| | ||||| ||  | || || ||  |||| |  ||||| || || ||||| |||||||||||||| ||||    
T  16829578 gctaggcctacttttcctcctataccaatgttgtatgcagaacttcttccaaccttactccagagaggtcattgtacaactagacagggcaagccaccac 16829479  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  16829478 ctgatccgttgcctccaaggttc 16829456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 16891903 - 16892025
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||||||||| ||||||||| | ||||| ||  | || || ||  |||| |  ||||| || || ||||| |||||||||||||| ||||    
T  16891903 gctaggcctacttttcctcctataccaatgttgtatgcagaacttcttccaaccttactccagagaggtcattgtacaactagacagggcaagccaccac 16892002  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  16892003 ctgatccgttgcctccaaggttc 16892025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 32049799 - 32049921
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| || || ||||    
T  32049799 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaaacccccac 32049898  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    |  | ||||||||||| ||||||    
T  32049899 cggacccgttgcctccaaggttc 32049921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 39890075 - 39890197
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||| ||||||||||| ||||||||| | ||||| ||  | || || ||  |||| |  ||||| || || ||||| |||||||||||||| ||||    
T  39890075 gctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaaccttactccagagaggtcattgtacaactagacagggcaagccaccac 39890174  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  39890175 ctgatccgttgcctccaaggttc 39890197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 296
Target Start/End: Complemental strand, 12716839 - 12716742
Alignment:
Q  199 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||| ||||||||||| ||||| ||| ||||||| ||||| || || ||| |||| |  ||||| |||||||| || || |||||||||||||||||    
T  12716839 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccacc 12716742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 296
Target Start/End: Original strand, 27777226 - 27777323
Alignment:
Q  199 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||| ||||||||||| ||||| ||| ||||||| ||||| || || ||| |||| |  ||||| |||||||| || || |||||||||||||||||    
T  27777226 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccacc 27777323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 296
Target Start/End: Original strand, 27803711 - 27803808
Alignment:
Q  199 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||| ||||||||||| ||||| ||| ||||||| ||||| || || ||| |||| |  ||||| |||||||| || || |||||||||||||||||    
T  27803711 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccacc 27803808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 296
Target Start/End: Original strand, 27816984 - 27817081
Alignment:
Q  199 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||| ||||||||||| ||||| ||| ||||||| ||||| || || ||| |||| |  ||||| |||||||| || || |||||||||||||||||    
T  27816984 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccacc 27817081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 296
Target Start/End: Complemental strand, 39052059 - 39051962
Alignment:
Q  199 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||| ||||||||||| ||||| ||| ||||||| ||||| || || ||| |||| |  ||||| |||||||| || || |||||||||||||||||    
T  39052059 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccacc 39051962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 12655381 - 12655481
Alignment:
Q  37 cctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgtta 136  Q
    |||||||| ||||| |||||||  || ||||||| | | || ||||| ||||| ||||||||||| || || ||| |||||| |||||| ||||||||||    
T  12655381 cctccgtcctacccatatgcgccgtattctcagcatcctttctttccgccattttatcatcagtaccccctgccaccgggtcaacctcaagtacccgtta 12655480  T
Q  137 a 137  Q
    |    
T  12655481 a 12655481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 28882053 - 28882153
Alignment:
Q  37 cctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgtta 136  Q
    |||||||| ||||| |||| ||  || ||||||| | | || ||||| ||||| ||||||||||| ||||| ||| |||||| |||||| ||||||||||    
T  28882053 cctccgtcatacccatatgtgccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtta 28882152  T
Q  137 a 137  Q
    |    
T  28882153 a 28882153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 339
Target Start/End: Complemental strand, 260984 - 260850
Alignment:
Q  205 acttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacctaatccgt 304  Q
    ||||||||||| ||||||||| | ||||| ||  | || || ||| |||| |  ||||| |||||||| || |||||||| ||||| |||||| ||| ||    
T  260984 acttttcctcctataccaatgttgtatgcagaacttcttccaactttactccagagaggacactgcacgactagacagggtaagcccccacctgatctgt 260885  T
Q  305 tgcctcccaggttccattctgacctcaagtgtgat 339  Q
    ||||||| ||||||   ||||| ||||| ||||||    
T  260884 tgcctccaaggttcaggtctgatctcaaatgtgat 260850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 137
Target Start/End: Original strand, 20837759 - 20837857
Alignment:
Q  39 tccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgttaa 137  Q
    |||||| ||||| |||||||  || ||||||| | | || ||||| ||||| ||||||||||| || || ||| |||||| |||||| |||||||||||    
T  20837759 tccgtcctacccatatgcgccgtattctcagcatcctttctttccgccattttatcatcagtaccccctgccaccgggtcaacctcaagtacccgttaa 20837857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 296
Target Start/End: Complemental strand, 9350219 - 9350122
Alignment:
Q  199 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||| ||||||||||| ||||| ||| ||||||| ||||| || || ||| |||| |  ||||| |||||||| || || || ||||||||||||||    
T  9350219 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactaggcaaggcaagcctccacc 9350122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 296
Target Start/End: Original strand, 12586814 - 12586911
Alignment:
Q  199 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||| ||||||||||| ||||| ||| ||||||| ||||  || || ||| |||| |  ||||| |||||||| || || |||||||||||||||||    
T  12586814 agaccaacttttcctcctataccgatgttatatgctgagtcgcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccacc 12586911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 4e-66; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 196 - 339
Target Start/End: Original strand, 20461085 - 20461228
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20461085 gctagacctacctttcctccgatactaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 20461184  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||||||||||||||||| |||||||||||||||||||    
T  20461185 ctgatccgttgcctcccaggttccgttctgacctcaagtgtgat 20461228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 196 - 346
Target Start/End: Complemental strand, 16208282 - 16208132
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| |||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  16208282 gctagacctacctttcctccgataccaatgttgtataccgagttactcccgactctacttctcagagggcactgcacaaccagacagggaaaacctccac 16208183  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || ||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  16208182 ctgatccgttgcctcccaggttccgttctgacctcaagtgtgatttccatc 16208132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 196 - 346
Target Start/End: Complemental strand, 20340586 - 20340436
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  20340586 gctagacctacctttcctccgataccaatgctatatgccgagctactcccaactctacttctcagagggcactacacaaccagacagggcaagcctccac 20340487  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || ||||||| ||||| ||||||| ||||||||||||||||||| ||||||    
T  20340486 ctgatccgttacctcctaggttccgttctgacctcaagtgtgatttccatc 20340436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 20340769 - 20340626
Alignment:
Q  13 atggacatcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccat 112  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||| ||||||||||||||||||||||||||| | ||||    
T  20340769 atggacatcaatgctgctcagctacctccgtcgtacccgtacgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccat 20340670  T
Q  113 cgggtctacctcaggtacccgttaacgccatcgtttagcaaatg 156  Q
    |||||| ||||||||||||||| || ||| ||||| | ||||||    
T  20340669 cgggtcaacctcaggtacccgtcaatgccgtcgttcaacaaatg 20340626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 196 - 346
Target Start/End: Original strand, 28151866 - 28152016
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  28151866 gctagacctacctttcctctgataccaatgctatatgctgagttgctcccgactctacttctcagagggcactgcacaatcagacaggggaagcctccac 28151965  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || ||| ||| ||||||||| |||  ||||||||||| |||||| ||||||    
T  28151966 ctgatctgttacctcccaggctccggtctgacctcaaatgtgatttccatc 28152016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 22 - 156
Target Start/End: Original strand, 20460935 - 20461069
Alignment:
Q  22 aatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctac 121  Q
    |||||||| ||| |||||||| ||||||||||||||||||||||||||| | | || |||||||||||||||||||| ||||||||||||||||||| ||    
T  20460935 aatgctgcccagttacctccgccgtacccgtatgcgcaatactctcagcatcctttctttccaccattctatcatcaatatcctctaccatcgggtcaac 20461034  T
Q  122 ctcaggtacccgttaacgccatcgtttagcaaatg 156  Q
    |||||||||||||||| ||||||||| ||||||||    
T  20461035 ctcaggtacccgttaatgccatcgttcagcaaatg 20461069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 196 - 339
Target Start/End: Complemental strand, 41793559 - 41793416
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||||||||    
T  41793559 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggcaagcctccac 41793460  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  41793459 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 41793416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 156
Target Start/End: Complemental strand, 16208453 - 16208319
Alignment:
Q  22 aatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctac 121  Q
    |||||||| ||| |||||||| |||| | |||   |||||||||||||| | | || || |||||||||||||| |||||||| | |||||||||||  |    
T  16208453 aatgctgcccagttacctccgccgtatcagtacatgcaatactctcagcatcctttcttcccaccattctatcaccagtatccaccaccatcgggtcagc 16208354  T
Q  122 ctcaggtacccgttaacgccatcgtttagcaaatg 156  Q
    ||||||||||| |||| ||||||||| ||||||||    
T  16208353 ctcaggtacccattaatgccatcgttcagcaaatg 16208319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 28584985 - 28585107
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  28584985 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 28585084  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  28585085 ctgatccgttgcctccaaggttc 28585107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 10962674 - 10962796
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| | || |  |||||||| || ||||| |||||||| ||||| ||||    
T  10962674 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttgctccagagagggcattgtacaactagacagggtaagcccccac 10962773  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  10962774 ctgatccgttgcctccaaggttc 10962796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 127; Significance: 2e-65; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 196 - 346
Target Start/End: Complemental strand, 16450135 - 16449985
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16450135 gctagacctacctttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 16450036  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || |||| |||||||||||||| | ||||||||||||||||||| ||||||    
T  16450035 ctgatcctttgcctcccaggtttcgttctgacctcaagtgtgatttccatc 16449985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 196 - 346
Target Start/End: Original strand, 16041329 - 16041479
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| || ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16041329 gctagacctaccttccctccgataccaatgttgtatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 16041428  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || ||||||||||||||||||||| ||||||||| ||||||||| ||||||    
T  16041429 ctgatccgttgcctcccaggttccgttctgacctaaagtgtgatttccatc 16041479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 196 - 346
Target Start/End: Original strand, 26484700 - 26484850
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  26484700 gctagacctacctttcctctgataccaatgctatatgctgagttgctcccgactctacttctcagagggcactgcacaatcagacaggggaagcctccac 26484799  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || ||||||| |||||||||||||  ||||||||||| |||||| ||||||    
T  26484800 ctgatccgttacctcccaggttccggtctgacctcaaatgtgatttccatc 26484850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 196 - 346
Target Start/End: Complemental strand, 2109142 - 2108992
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||| |||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  2109142 gctagacctacctttcctctgataccaatgatatatgctgagttgctcccgactctacttctcagagggcactgcacaatcagacaggggaagcctccac 2109043  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || ||||||| |||||||||||||  ||||||||||| |||||| ||||||    
T  2109042 ctgatccgttacctcccaggttccggtctgacctcaaatgtgatttccatc 2108992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 196 - 346
Target Start/End: Original strand, 2775365 - 2775515
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||| |||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  2775365 gctagacctacctttcctctgataccaatgctatatgctgagtagctcccgactctacttctcagagggcactgcacaatcagacaggggaagcctccac 2775464  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || ||||||| |||||||||||||  ||||||||||| |||||| ||||||    
T  2775465 ctgatccgttacctcccaggttccggtctgacctcaaatgtgatttccatc 2775515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 196 - 346
Target Start/End: Complemental strand, 31088601 - 31088451
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||| |||||||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  31088601 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 31088502  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || |||| | |||||||| ||||| ||| ||||||||||||||| ||||||    
T  31088501 ctgatccatcgcctcccaagttccgttcggacctcaagtgtgatttccatc 31088451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 196 - 346
Target Start/End: Complemental strand, 39211160 - 39211010
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||    
T  39211160 gctagacctacctttcctctgataccaatgctatatgctgagttgctcccgactctacttctcagagggcactgcacaatcagacaggggaagcttccac 39211061  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || ||||||| |||||||||||||  ||||||||||| |||||| ||||||    
T  39211060 ctgatccgttacctcccaggttccggtctgacctcaaatgtgatttccatc 39211010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 31088784 - 31088651
Alignment:
Q  13 atggacatcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccat 112  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||| ||||||||||||||||||||||||||| | ||||    
T  31088784 atggacatcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccat 31088685  T
Q  113 cgggtctacctcaggtacccgttaacgccatcgt 146  Q
    |||||| |||||||||||||||||| ||| ||||    
T  31088684 cgggtcaacctcaggtacccgttaatgccgtcgt 31088651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 13 - 146
Target Start/End: Original strand, 45733283 - 45733416
Alignment:
Q  13 atggacatcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccat 112  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||| ||||||||||||||||||||||||||| | ||||    
T  45733283 atggacatcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccat 45733382  T
Q  113 cgggtctacctcaggtacccgttaacgccatcgt 146  Q
    |||||| |||||||||||||||||| ||| ||||    
T  45733383 cgggtcaacctcaggtacccgttaatgccgtcgt 45733416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 196 - 346
Target Start/End: Original strand, 45733466 - 45733616
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||| |||||||||| ||||||| || ||||||   ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  45733466 gctagacctacctttcctctgataccaatgttatatgctgaattactcttaactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 45733565  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || |||| | |||||||| ||||| ||| ||||||||||||||| ||||||    
T  45733566 ctgatccatcgcctcccaagttccgttcggacctcaagtgtgatttccatc 45733616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 196 - 338
Target Start/End: Original strand, 18540805 - 18540947
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  18540805 gctagacctacttttcctctgataccaatgctatatgctgagttgctcccgactctacttctcagagggcactgcacaatcagacaggggaagcctccac 18540904  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtga 338  Q
    |  | || || ||||| |||||||  ||||| || ||||||||    
T  18540905 cggaccctttacctccaaggttccgctctgatcttaagtgtga 18540947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 22 - 156
Target Start/End: Original strand, 16041155 - 16041289
Alignment:
Q  22 aatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctac 121  Q
    |||||||| ||| |||||||||||||||| ||||||| ||||||||||| | |||| ||||||||||||||||||||||||||| |  ||||||||| ||    
T  16041155 aatgctgcccagttacctccgtcgtacccatatgcgccatactctcagcatcccttctttccaccattctatcatcagtatcctttgtcatcgggtcaac 16041254  T
Q  122 ctcaggtacccgttaacgccatcgtttagcaaatg 156  Q
    ||||||||||||||||  || ||||| ||||||||    
T  16041255 ctcaggtacccgttaattccgtcgttcagcaaatg 16041289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 22 - 153
Target Start/End: Complemental strand, 16450309 - 16450178
Alignment:
Q  22 aatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctac 121  Q
    |||||||| ||| ||||||||||||||||||| ||||| |||||||||| | |||| ||||||||||| ||||||||||||||| | |||||||||| ||    
T  16450309 aatgctgcccagttacctccgtcgtacccgtacgcgcagtactctcagcatcccttctttccaccattttatcatcagtatcctttgccatcgggtcaac 16450210  T
Q  122 ctcaggtacccgttaacgccatcgtttagcaa 153  Q
    ||||||||||| |||| ||| ||||| |||||    
T  16450209 ctcaggtacccattaatgccgtcgttcagcaa 16450178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 11424913 - 11424791
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| ||||||||||||||||||||||| ||||    
T  11424913 gctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccatagagggcattgcacaaccagacagggcaagcccccac 11424814  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  11424813 ctgatccgttgcctccaaggttc 11424791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 196 - 339
Target Start/End: Original strand, 5127998 - 5128141
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||||||||||||||| ||| | ||||| ||||| || || ||| |||| |  |||||||| || |||||||||||||| ||||| ||||    
T  5127998 gctagacctacttttcctccgataccgatgttgtatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggtaagcccccac 5128097  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    |||||||||||||||| ||||||   ||||| ||||| ||||||    
T  5128098 ctaatccgttgcctccaaggttcaggtctgatctcaaatgtgat 5128141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 10917005 - 10916883
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || |||||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  10917005 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggcaagcccccac 10916906  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  10916905 ctgatccgttgcctccaaggttc 10916883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 16503517 - 16503395
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || |||||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  16503517 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggcaagcccccac 16503418  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  16503417 ctgatccgttgcctccaaggttc 16503395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 16518553 - 16518431
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || |||||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  16518553 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggcaagcccccac 16518454  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  16518453 ctgatccgttgcctccaaggttc 16518431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 196 - 339
Target Start/End: Complemental strand, 5147477 - 5147334
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||||||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  5147477 gctagacctacttttcctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggtaagcccccac 5147378  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  5147377 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 5147334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 2154579 - 2154701
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||| |||||| ||||||||||| ||| | ||||| ||||| || || ||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  2154579 gctagacatactttccctccgataccgatgttgtatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggcaagcccccac 2154678  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  2154679 ctgatccgttgcctccaaggttc 2154701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 339
Target Start/End: Complemental strand, 16736597 - 16736454
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  16736597 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggcaagcccccac 16736498  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||| ||||| ||||||   ||||| ||||| ||||||    
T  16736497 ctgatccgttacctccaaggttcaggtctgatctcaaatgtgat 16736454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 339
Target Start/End: Complemental strand, 16751651 - 16751508
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  16751651 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggcaagcccccac 16751552  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||| ||||| ||||||   ||||| ||||| ||||||    
T  16751551 ctgatccgttacctccaaggttcaggtctgatctcaaatgtgat 16751508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 339
Target Start/End: Original strand, 17523538 - 17523681
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  17523538 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggcaagcccccac 17523637  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||| ||||| ||||||   ||||| ||||| ||||||    
T  17523638 ctgatccgttacctccaaggttcaggtctgatctcaaatgtgat 17523681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 339
Target Start/End: Complemental strand, 17529677 - 17529534
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  17529677 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggcaagcccccac 17529578  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||| ||||| ||||||   ||||| ||||| ||||||    
T  17529577 ctgatccgttacctccaaggttcaggtctgatctcaaatgtgat 17529534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 4145260 - 4145138
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  4145260 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 4145161  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  4145160 ctgatccgttgcctccaaggttc 4145138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 9618657 - 9618779
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  9618657 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 9618756  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  9618757 ctgatccgttgcctccaaggttc 9618779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 26275231 - 26275109
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  26275231 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 26275132  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  26275131 ctgatccgttgcctccaaggttc 26275109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 26320006 - 26319884
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  26320006 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 26319907  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  26319906 ctgatccgttgcctccaaggttc 26319884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 45387349 - 45387471
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  45387349 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 45387448  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  45387449 ctgatccgttgcctccaaggttc 45387471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 16503679 - 16503579
Alignment:
Q  37 cctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgtta 136  Q
    |||||||| ||||| |||||||  |||||||||| | | || ||||| ||||||||||||||||||||  | ||| |||||| |||||||||||||||||    
T  16503679 cctccgtcatacccatatgcgccgtactctcagcatcctttctttccgccattctatcatcagtatcccttgccaccgggtcaacctcaggtacccgtta 16503580  T
Q  137 a 137  Q
    |    
T  16503579 a 16503579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 16518715 - 16518615
Alignment:
Q  37 cctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgtta 136  Q
    |||||||| ||||| |||||||  |||||||||| | | || ||||| ||||||||||||||||||||  | ||| |||||| |||||||||||||||||    
T  16518715 cctccgtcatacccatatgcgccgtactctcagcatcctttctttccgccattctatcatcagtatcccttgccaccgggtcaacctcaggtacccgtta 16518616  T
Q  137 a 137  Q
    |    
T  16518615 a 16518615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 318
Target Start/End: Original strand, 3445315 - 3445434
Alignment:
Q  199 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 298  Q
    ||||| ||||||||||| ||||||||| | ||||| ||  | || || |||||||| |  |||||||| || ||||| |||||||||||||| ||||||     
T  3445315 agaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactctactccagagagggcattgtacaactagacagggcaagccaccacctg 3445414  T
Q  299 atccgttgcctcccaggttc 318  Q
    ||||||||||||| ||||||    
T  3445415 atccgttgcctccaaggttc 3445434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 196 - 339
Target Start/End: Original strand, 26435263 - 26435406
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||| ||||||||||| ||||||||| | ||||| ||  | || || |||||||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  26435263 gctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactctactccagagagggcattgtacaactagacagggtaagcccccac 26435362  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  26435363 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 26435406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 26670051 - 26669929
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  26670051 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 26669952  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || |||||||||| || ||||||    
T  26669951 ctgatccgttgcccccaaggttc 26669929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 197 - 318
Target Start/End: Complemental strand, 31564526 - 31564405
Alignment:
Q  197 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||||| || || ||| |||| |  ||||| || || ||||| |||||||| ||||| |||||    
T  31564526 ctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagaggacattgtacaactagacagggtaagcccccacc 31564427  T
Q  297 taatccgttgcctcccaggttc 318  Q
    | ||||||||||||| ||||||    
T  31564426 tgatccgttgcctccaaggttc 31564405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 318
Target Start/End: Complemental strand, 26538004 - 26537885
Alignment:
Q  199 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 298  Q
    ||||| ||||||||||| ||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| ||  | || |||||||||||||| ||||||     
T  26538004 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtgcgactagacagggcaagccaccacctg 26537905  T
Q  299 atccgttgcctcccaggttc 318  Q
    ||||||||||||| ||||||    
T  26537904 atccgttgcctccaaggttc 26537885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 137
Target Start/End: Original strand, 5127818 - 5127936
Alignment:
Q  19 atcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtc 118  Q
    |||||||| |||||  | |||||||| ||||| |||| ||  || ||||||| | | || ||||| ||||| ||||||||||||||||| ||| ||||||    
T  5127818 atcaatgcagctcaaatgcctccgtcatacccatatgtgccgtattctcagcatcctttctttccgccattttatcatcagtatcctctgccaccgggtc 5127917  T
Q  119 tacctcaggtacccgttaa 137  Q
     |||||| |||||||||||    
T  5127918 aacctcaagtacccgttaa 5127936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 318
Target Start/End: Original strand, 11441587 - 11441700
Alignment:
Q  205 acttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacctaatccgt 304  Q
    ||||||||||| ||||||||| | || || ||  | || || |||||||| |  |||||||| || ||||| |||||||||||||| |||||| ||||||    
T  11441587 acttttcctcctataccaatgttgtacgcagaacttcttccaactctactccagagagggcattgtacaactagacagggcaagccaccacctgatccgt 11441686  T
Q  305 tgcctcccaggttc 318  Q
    ||||||| ||||||    
T  11441687 tgcctccaaggttc 11441700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 318
Target Start/End: Original strand, 31124927 - 31125048
Alignment:
Q  197 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||  | || || ||| |||| |  ||||| || || ||||| |||||||||||||| |||||    
T  31124927 ctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactttactccagagaggacattgtacaactagacagggcaagccaccacc 31125026  T
Q  297 taatccgttgcctcccaggttc 318  Q
    | ||||||||||||| ||||||    
T  31125027 tgatccgttgcctccaaggttc 31125048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 338
Target Start/End: Original strand, 5159525 - 5159667
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||| ||||||||||| ||||||||| | ||||| ||| | || || ||| |||| |  ||||| |||||||| || || ||||||||||||||||    
T  5159525 gctagaccaacttttcctcctataccaatgttgtatgcagagcttcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccac 5159624  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtga 338  Q
    |  | || || ||||| |||||||  ||||| || ||||||||    
T  5159625 cggaccctttacctccaaggttccgctctgatcttaagtgtga 5159667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 64 - 137
Target Start/End: Complemental strand, 10917137 - 10917064
Alignment:
Q  64 tctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgttaa 137  Q
    ||||||| | |||| ||||| ||||| ||||||||||||||||| ||| |||||| |||||| ||||| |||||    
T  10917137 tctcagcatcccttctttccgccattttatcatcagtatcctctgccaccgggtcaacctcaagtacctgttaa 10917064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 2154417 - 2154517
Alignment:
Q  37 cctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgtta 136  Q
    |||||||| ||||| |||| ||  || ||||||| | | || ||||| ||||| ||||||||||| ||||| ||| |||||| |||||| ||| ||||||    
T  2154417 cctccgtcatacccatatgtgccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtatccgtta 2154516  T
Q  137 a 137  Q
    |    
T  2154517 a 2154517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0558 (Bit Score: 123; Significance: 4e-63; HSPs: 1)
Name: scaffold0558
Description:

Target: scaffold0558; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 196 - 346
Target Start/End: Complemental strand, 279 - 129
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  279 gctagacctacctttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgctcaaccagacatggcaagcctccac 180  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || ||||||||||| ||||||||| ||||||||||||||||||| ||||||    
T  179 ctgatccgttgccttccaggttccgttctgacctcaagtgtgatttccatc 129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 123; Significance: 4e-63; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 196 - 346
Target Start/End: Original strand, 15227890 - 15228040
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  15227890 gctagacctacctttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgtacaaccagacagggtaagcctccac 15227989  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || |||| |||||||||||||||| ||||||||||||||||||| ||||||    
T  15227990 ctgatccattgcctcccaggttccgttctgacctcaagtgtgatttccatc 15228040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 196 - 346
Target Start/End: Complemental strand, 15285179 - 15285029
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15285179 gctagacctacctttcctccgataccaatgctatatttcgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 15285080  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || |||||||||||||||||||||  |||||||||||||||||| ||||||    
T  15285079 ctgatccgttgcctcccaggttccggtctgacctcaagtgtgatttccatc 15285029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 196 - 346
Target Start/End: Original strand, 1900277 - 1900427
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  1900277 gctagacctacctttcctccgataccaatgctgtatgccgagttactcccgactctacttctcagagggcactgcacaaccagacatggtaagcctccac 1900376  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || ||||||||| || |||||| | ||||||||||||||||||| ||||||    
T  1900377 ctgatccgttgcttctcaggtttcgttctgacctcaagtgtgatttccatc 1900427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 196 - 346
Target Start/End: Complemental strand, 24460856 - 24460706
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||| |||||||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24460856 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 24460757  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || |||| | |||||||| ||||| ||| ||||||||||||||| ||||||    
T  24460756 ctgatccatcgcctcccaagttccgttcggacctcaagtgtgatttccatc 24460706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 199 - 346
Target Start/End: Complemental strand, 15391586 - 15391439
Alignment:
Q  199 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 298  Q
    |||||||| |||||||||||||||||||| || |||||||| ||||||||| | ||||||| |||||||||||||||||| ||||| |||||||||||||    
T  15391586 agacctacctttcctccgataccaatgctgtacgccgagttgctcccgactttgcttctcaaagggcactgcacaaccaggcaggggaagcctccaccta 15391487  T
Q  299 atccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    | ||||||||||||||||||| ||||||||||||||| ||| ||||||    
T  15391486 acccgttgcctcccaggttccgttctgacctcaagtgcgatttccatc 15391439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 24461039 - 24460906
Alignment:
Q  13 atggacatcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccat 112  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||| |||||||||||||||||||||||| || | ||||    
T  24461039 atggacatcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtattctttgccat 24460940  T
Q  113 cgggtctacctcaggtacccgttaacgccatcgt 146  Q
    |||||| |||||||||||||||||| ||| ||||    
T  24460939 cgggtcaacctcaggtacccgttaatgccgtcgt 24460906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 196 - 346
Target Start/End: Complemental strand, 14235776 - 14235626
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||| |||||||||| | ||||||||| | ||||||||||| ||||| | ||||||||| |||||||||||||||||||||||||    
T  14235776 gctagacctacctttcctctgataccaatgttgtatgccgagctgctcccgactctgcttcttaaagggcactgtacaaccagacagggcaagcctccac 14235677  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    |||| || |||||||||||||||||||  |||||||| |||||| ||||||    
T  14235676 ctaaccctttgcctcccaggttccatttcgacctcaaatgtgatttccatc 14235626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 22 - 156
Target Start/End: Original strand, 1900103 - 1900237
Alignment:
Q  22 aatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctac 121  Q
    |||||||| ||| |||||||||||||||| ||||||| ||||||||||| | |||| ||||||||||||||||||||||||||| | |||||||||| ||    
T  1900103 aatgctgcccagttacctccgtcgtacccatatgcgccatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 1900202  T
Q  122 ctcaggtacccgttaacgccatcgtttagcaaatg 156  Q
    |||||||||||||||| ||| ||||| ||||||||    
T  1900203 ctcaggtacccgttaatgccgtcgttcagcaaatg 1900237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 22 - 156
Target Start/End: Original strand, 15227716 - 15227850
Alignment:
Q  22 aatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctac 121  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||| |||||| | |||||||||| ||    
T  15227716 aatgctgcccagttacctccgtcgtacccgtatgcgcaatactctcagcatcccttctttccaccattctatcatcaatatcctttgccatcgggtcaac 15227815  T
Q  122 ctcaggtacccgttaacgccatcgtttagcaaatg 156  Q
    |||||||||||||||| ||  ||||| ||||||||    
T  15227816 ctcaggtacccgttaatgctgtcgttcagcaaatg 15227850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 22 - 156
Target Start/End: Complemental strand, 15285353 - 15285219
Alignment:
Q  22 aatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctac 121  Q
    |||||||| ||| ||||||| | |||||| ||||||||||||||||||| | | || |||||||||||||||||||||||||||||||||||||||| ||    
T  15285353 aatgctgcccagttacctccattgtacccatatgcgcaatactctcagcatcctttctttccaccattctatcatcagtatcctctaccatcgggtcaac 15285254  T
Q  122 ctcaggtacccgttaacgccatcgtttagcaaatg 156  Q
    ||||||| |||||||| ||||||||| ||||||||    
T  15285253 ctcaggtgcccgttaatgccatcgttcagcaaatg 15285219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 196 - 339
Target Start/End: Original strand, 17014020 - 17014163
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || |||||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  17014020 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccaaagagggcattgtacaaccagacagggcaagcccccac 17014119  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||||||||||||||||   || |||||||| ||||||    
T  17014120 ctgatccgttgcctcccaggttcaggtccgacctcaaatgtgat 17014163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 196 - 339
Target Start/End: Complemental strand, 14763555 - 14763412
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  14763555 gctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggcaagcccccac 14763456  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  14763455 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 14763412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 156
Target Start/End: Complemental strand, 14235953 - 14235819
Alignment:
Q  22 aatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctac 121  Q
    |||||||||||| |||||| | |||||| ||||  |||||||||||||| | | || || |||||||||||||||||||| ||||||||||||||||  |    
T  14235953 aatgctgctcagttacctctgccgtaccagtatatgcaatactctcagcatcctttcttcccaccattctatcatcagtaccctctaccatcgggtcacc 14235854  T
Q  122 ctcaggtacccgttaacgccatcgtttagcaaatg 156  Q
    |  ||||||||||||| ||||| | | ||||||||    
T  14235853 cataggtacccgttaatgccattgctcagcaaatg 14235819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 24592565 - 24592443
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || || ||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  24592565 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggcaagcccccac 24592466  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  24592465 ctgatccgttgcctccaaggttc 24592443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 14098561 - 14098683
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||||||||| ||||||||| | ||||| ||  | || || |||||||| |  |||||||| || ||||| |||||||||||||| ||||    
T  14098561 gctagacctacttttcctcctataccaatgttgtatgcagaacttcttccaactctactccagagagggcattgtacaactagacagggcaagccaccac 14098660  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  14098661 ctgatccgttgcctccaaggttc 14098683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 14665038 - 14665160
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || || ||| |||| |  ||||| || || |||||||||||||||||||| ||||    
T  14665038 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccaactttactccatagaggacattgtacaaccagacagggcaagcccccac 14665137  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  14665138 ctgatccgttgcctccaaggttc 14665160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 339
Target Start/End: Original strand, 5005893 - 5006036
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| ||||| |||||||| ||||    
T  5005893 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacaaggcaagcccccac 5005992  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  5005993 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 5006036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 339
Target Start/End: Original strand, 6569873 - 6570016
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||||||| | ||||| ||  | || || |||||||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  6569873 gctagacctactttccctccgataccaatgttgtatgcagaacttcttccaactctactccagagagggcattgtacaactagacagggtaagcccccac 6569972  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  6569973 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 6570016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 27163568 - 27163446
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  27163568 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 27163469  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  27163468 ctgatccgttgcctccaaggttc 27163446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 318
Target Start/End: Complemental strand, 18800863 - 18800742
Alignment:
Q  197 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||||| || || ||| |||| |  |||||||| || || || |||||||||||||| |||||    
T  18800863 ctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagagggcattgtacgactagacagggcaagccaccacc 18800764  T
Q  297 taatccgttgcctcccaggttc 318  Q
    | ||||||||||||| ||||||    
T  18800763 tgatccgttgcctccaaggttc 18800742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 318
Target Start/End: Original strand, 30753777 - 30753896
Alignment:
Q  199 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 298  Q
    ||||| ||||||||||| ||||||||| | ||||| ||  | || || |||||||| |  |||||||| || ||||| |||||||||||||| ||||||     
T  30753777 agaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactctactccagagagggcattgtacaactagacagggcaagccaccacctg 30753876  T
Q  299 atccgttgcctcccaggttc 318  Q
    ||||||||||||| ||||||    
T  30753877 atccgttgcctccaaggttc 30753896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 31126769 - 31126647
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||||||||| ||||||||| | ||||| ||| | || || |||||||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  31126769 gctaggcctacttttcctcctataccaatgttgtatgcagagcttcttccaactctactccagagagggcattgtacaactagacagggtaagcccccac 31126670  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || | ||||||||||| ||||||    
T  31126669 ctgacccgttgcctccaaggttc 31126647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 339
Target Start/End: Complemental strand, 33674046 - 33673906
Alignment:
Q  199 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 298  Q
    ||||| ||||||||||| ||||||||| | ||||| ||||| || || ||| |||| |  ||||| |||||||| || || |||||||||||||||||      
T  33674046 agaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccaccgg 33673947  T
Q  299 atccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    | ||||||||||| ||||||   ||||| ||||| ||||||    
T  33673946 acccgttgcctccaaggttcaggtctgatctcaaatgtgat 33673906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 197 - 339
Target Start/End: Complemental strand, 36344765 - 36344623
Alignment:
Q  197 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||||| ||||||||||| ||||| ||| | ||||| ||| | || || ||| |||| |  ||||| |||||||| || |||||||| ||||| |||||    
T  36344765 ctagaccaacttttcctcctatacctatgttgtatgcagagcttcttccaactttactccagagaggacactgcacgactagacagggtaagcccccacc 36344666  T
Q  297 taatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    | ||||||||||||| ||||||   ||||| ||||| ||||||    
T  36344665 tgatccgttgcctccgaggttcaggtctgatctcaaatgtgat 36344623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 40105889 - 40105767
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||  | || || ||| |||| |  |||||||| || || || |||||||||||||| ||||    
T  40105889 gctaggcctactttccctccgataccgatgttatatgctgaacttcttccaactttactccagagagggcattgtacgactagacagggcaagccaccac 40105790  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  40105789 ctgatccgttgcctccaaggttc 40105767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 137
Target Start/End: Original strand, 14664858 - 14664976
Alignment:
Q  19 atcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtc 118  Q
    ||||||||||| ||  | |||||||| ||||| ||||| |  || ||||||| | | || ||||| ||||| ||||||||||| ||||| ||| ||||||    
T  14664858 atcaatgctgcccaaatgcctccgtcatacccatatgcaccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtc 14664957  T
Q  119 tacctcaggtacccgttaa 137  Q
     |||||| |||||||||||    
T  14664958 aacctcaagtacccgttaa 14664976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 15391764 - 15391650
Alignment:
Q  18 catcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggt 117  Q
    |||||||| |||||||||||||||| |||| | |||   |||||||||||||| | | || || |||||||| ||||| |||||||| | | |  |||||    
T  15391764 catcaatgttgctcagctacctccgccgtatcagtacatgcaatactctcagcatcctttcttcccaccattttatcaccagtatccgccatcgccgggt 15391665  T
Q  118 ctacctcaggtaccc 132  Q
    | |||||||||||||    
T  15391664 caacctcaggtaccc 15391650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 338
Target Start/End: Original strand, 24112682 - 24112824
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||| ||||||||||| ||||||||| | ||||| ||| | || || ||| |||| |  ||||| |||||||| || || ||||||||||||||||    
T  24112682 gctagaccaacttttcctcctataccaatgttgtatgcagagcttcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccac 24112781  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtga 338  Q
    |  | || || ||||| |||||||  ||||| || ||||||||    
T  24112782 cggaccctttacctccaaggttccgctctgatcttaagtgtga 24112824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 137
Target Start/End: Complemental strand, 24592742 - 24592624
Alignment:
Q  19 atcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtc 118  Q
    |||||||| |||||  | |||||||| ||||| |||| ||  || ||||||| | | || ||||| ||||| ||||||||||| ||||| ||| ||||||    
T  24592742 atcaatgcagctcaaatgcctccgtcatacccatatgtgccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtc 24592643  T
Q  119 tacctcaggtacccgttaa 137  Q
     |||||| |||||||||||    
T  24592642 aacctcaagtacccgttaa 24592624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 338
Target Start/End: Complemental strand, 34189211 - 34189069
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||| ||||||||||| ||||||||| | ||||| ||| | || || ||| |||| |  ||||| |||||||| || || ||||||||||||||||    
T  34189211 gctagaccaacttttcctcctataccaatgttgtatgcagagcttcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccac 34189112  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtga 338  Q
    |  | || || ||||| |||||||  ||||| || ||||||||    
T  34189111 cggaccctttacctccaaggttccgctctgatcttaagtgtga 34189069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 339
Target Start/End: Original strand, 54833408 - 54833550
Alignment:
Q  197 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||||| ||||||||||| ||||| ||| | ||||| ||| | || || ||| |||| |  |||||||| || ||||| || ||||||||||| |||||    
T  54833408 ctagaccaacttttcctcctatacctatgttgtatgcagagcttcttccaactttactccaaagagggcattgtacaactaggcagggcaagcccccacc 54833507  T
Q  297 taatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    | | ||||||||||| ||||||   ||||| ||||| ||||||    
T  54833508 tgacccgttgcctccaaggttcaggtctgatctcaaatgtgat 54833550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 296
Target Start/End: Original strand, 39850661 - 39850758
Alignment:
Q  199 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||| ||||||||||| ||||| ||| ||||||| ||||| || || ||| |||| |  ||||| |||||||| || || |||||||||||||||||    
T  39850661 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccacc 39850758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 17013858 - 17013958
Alignment:
Q  37 cctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgtta 136  Q
    ||||| || ||||| |||||||  || ||||||| | | || ||||| ||||| ||||||||||| ||||| ||| |||||| |||||| ||||||||||    
T  17013858 cctccttcatacccatatgcgccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtta 17013957  T
Q  137 a 137  Q
    |    
T  17013958 a 17013958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 119; Significance: 1e-60; HSPs: 4)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 196 - 346
Target Start/End: Original strand, 20393 - 20543
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||| |||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20393 gctagacctacctttcccccgataccaatgttgtatgctgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 20492  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || ||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  20493 ctgatccgttgcctcccaggttccgttctgacctcaagtgtgatttccatc 20543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 22 - 156
Target Start/End: Original strand, 20240 - 20374
Alignment:
Q  22 aatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctac 121  Q
    |||||||| ||| |||||||||||||||| ||||||| ||||||||||| | |||| |||||| |||||||||||||||||||| | |||||||||| ||    
T  20240 aatgctgcccagttacctccgtcgtacccatatgcgccatactctcagcatcccttctttccatcattctatcatcagtatcctttgccatcgggtcaac 20339  T
Q  122 ctcaggtacccgttaacgccatcgtttagcaaatg 156  Q
    |||||||||||||||| ||| ||||| ||||||||    
T  20340 ctcaggtacccgttaatgccgtcgttcagcaaatg 20374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 30296 - 30396
Alignment:
Q  37 cctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgtta 136  Q
    |||||||| ||||| |||||||  || ||||||| | |||| ||||| ||||| ||||||||||| ||||| ||| |||||| |||||| ||||||||||    
T  30296 cctccgtcatacccatatgcgccgtattctcagcatcccttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtta 30395  T
Q  137 a 137  Q
    |    
T  30396 a 30396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 271 - 318
Target Start/End: Original strand, 30532 - 30579
Alignment:
Q  271 acaaccagacagggcaagcctccacctaatccgttgcctcccaggttc 318  Q
    ||||| |||||||||||||| |||||| ||||||||||||| ||||||    
T  30532 acaactagacagggcaagccaccacctgatccgttgcctccaaggttc 30579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 119; Significance: 1e-60; HSPs: 76)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 196 - 346
Target Start/End: Complemental strand, 16626798 - 16626648
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| |||||||||||||||||| |||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16626798 gctagacctacctttcctccgataccaatgatatatgtcgagttactccctactctacttcttagagggcactgcacaaccagacagggcaagcctccac 16626699  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || ||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  16626698 ctgatccgttgcctcccaggttccgttctgacctcaagtgtgatttccatc 16626648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 196 - 346
Target Start/End: Original strand, 18530354 - 18530504
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| |||||||||||||||||| | ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18530354 gctagacctacctttcctccgataccaatgttgtatgctgagttactcctgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 18530453  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || ||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  18530454 ctgatccgttgcctcccaggttccgttctgacctcaagtgtgatttccatc 18530504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 196 - 346
Target Start/End: Original strand, 4625910 - 4626060
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||| |||||||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  4625910 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 4626009  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || |||| | |||||||| ||||| ||| ||||||||||||||| ||||||    
T  4626010 ctgatccatcgcctcccaagttccgttcggacctcaagtgtgatttccatc 4626060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 196 - 346
Target Start/End: Complemental strand, 31034409 - 31034259
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  31034409 gctagacctacctttcctctgataccaatgctatatgctgagttgctcccgactctacttctcagagggcactgcacaatcagacaggggaagcctccac 31034310  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || ||||||| ||||| |||||||  ||||||||||| |||||| ||||||    
T  31034309 ctgatccgttacctcctaggttccggtctgacctcaaatgtgatttccatc 31034259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 196 - 346
Target Start/End: Original strand, 32292718 - 32292868
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||    
T  32292718 gctagacctacctttcctctgataccaatgctatatgctgagttgctcccgactctacttctcagagggcactgcacaatcagacaggggaagtctccac 32292817  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || ||||||| |||||||||||||  ||||||||||| |||||| ||||||    
T  32292818 ctgatccgttacctcccaggttccggtctgacctcaaatgtgatttccatc 32292868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 17994259 - 17994126
Alignment:
Q  13 atggacatcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccat 112  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||| ||||||||||||||||||||||||||| | ||||    
T  17994259 atggacatcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccat 17994160  T
Q  113 cgggtctacctcaggtacccgttaacgccatcgt 146  Q
    |||||| |||||||||||||||||| ||| ||||    
T  17994159 cgggtcaacctcaggtacccgttaatgccgtcgt 17994126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 196 - 346
Target Start/End: Complemental strand, 17994076 - 17993926
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||| |||||||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17994076 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 17993977  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || |||| | |||||||| ||||| ||| |||||||| |||||| ||||||    
T  17993976 ctgatccatcgcctcccaagttccgttcggacctcaaatgtgatttccatc 17993926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 4625727 - 4625851
Alignment:
Q  13 atggacatcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccat 112  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||| ||||||||||| ||||||||||||||| | ||||    
T  4625727 atggacatcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattatatcatcagtatcctttgccat 4625826  T
Q  113 cgggtctacctcaggtacccgttaa 137  Q
    |||||| ||||||||||||||||||    
T  4625827 cgggtcaacctcaggtacccgttaa 4625851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 196 - 346
Target Start/End: Original strand, 5652353 - 5652503
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||| |||||||||| ||||||| || ||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||    
T  5652353 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctactcctcaaagggcactgcacaaccagacagggcaagccttcac 5652452  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || | |||| |||||||| ||||| ||| ||||||||||||||| ||||||    
T  5652453 ctgacccgtcgcctcccaagttccgttcggacctcaagtgtgatttccatc 5652503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 22 - 156
Target Start/End: Complemental strand, 16626972 - 16626838
Alignment:
Q  22 aatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctac 121  Q
    |||||||| ||| |||||||||||||||||||||| ||||||||||||| | |||| |||||||| ||||||||||||||||||||||||||||||| ||    
T  16626972 aatgctgcccagttacctccgtcgtacccgtatgcacaatactctcagcatcccttctttccaccgttctatcatcagtatcctctaccatcgggtcaac 16626873  T
Q  122 ctcaggtacccgttaacgccatcgtttagcaaatg 156  Q
    ||| |||||||||||| ||||||||| ||||||||    
T  16626872 ctccggtacccgttaatgccatcgttcagcaaatg 16626838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 13 - 146
Target Start/End: Original strand, 5652170 - 5652303
Alignment:
Q  13 atggacatcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccat 112  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||| ||||||||||||||||||||||||| | | | ||    
T  5652170 atggacatcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcgtttgcaat 5652269  T
Q  113 cgggtctacctcaggtacccgttaacgccatcgt 146  Q
    |||||| |||||||||||||||||| ||| ||||    
T  5652270 cgggtcaacctcaggtacccgttaatgccgtcgt 5652303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 22 - 156
Target Start/End: Original strand, 18530186 - 18530320
Alignment:
Q  22 aatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctac 121  Q
    |||||||| ||| ||||||| |||||||||||||||||||||||||||| | | || |||||||||||||||||||||||||||||||||||||||| ||    
T  18530186 aatgctgcccagttacctccatcgtacccgtatgcgcaatactctcagcatcctttctttccaccattctatcatcagtatcctctaccatcgggtcaac 18530285  T
Q  122 ctcaggtacccgttaacgccatcgtttagcaaatg 156  Q
    |||| || |||||||| ||| ||||| ||||||||    
T  18530286 ctcaagtgcccgttaatgccgtcgttcagcaaatg 18530320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 5713007 - 5713128
Alignment:
Q  13 atggacatcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccat 112  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||| ||||||||||||||||||||||| ||||| |||     
T  5713007 atggacatcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtaccctctgccac 5713106  T
Q  113 cgggtctacctcaggtacccgt 134  Q
    |||||| |||||| || |||||    
T  5713107 cgggtcaacctcaagtgcccgt 5713128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 5723917 - 5724038
Alignment:
Q  13 atggacatcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccat 112  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||| ||||||||||||||||||||||| ||||| |||     
T  5723917 atggacatcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtaccctctgccac 5724016  T
Q  113 cgggtctacctcaggtacccgt 134  Q
    |||||| |||||| || |||||    
T  5724017 cgggtcaacctcaagtgcccgt 5724038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 5757560 - 5757439
Alignment:
Q  13 atggacatcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccat 112  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||| ||||||||||||||||||||||| ||||| |||     
T  5757560 atggacatcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtaccctctgccac 5757461  T
Q  113 cgggtctacctcaggtacccgt 134  Q
    |||||| |||||| || |||||    
T  5757460 cgggtcaacctcaagtgcccgt 5757439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 5768451 - 5768330
Alignment:
Q  13 atggacatcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccat 112  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||| ||||||||||||||||||||||| ||||| |||     
T  5768451 atggacatcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtaccctctgccac 5768352  T
Q  113 cgggtctacctcaggtacccgt 134  Q
    |||||| |||||| || |||||    
T  5768351 cgggtcaacctcaagtgcccgt 5768330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 15892998 - 15892876
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||||||| | ||||| ||||| || |||||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  15892998 gctagacctactttccctccgataccaatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggcaagcccccac 15892899  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || |||| |||||||||||||||    
T  15892898 ctgatcctttgcctcccaggttc 15892876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 8295938 - 8296060
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || |||||| |||| | ||||||||| || |||||||||||||||||||| | ||    
T  8295938 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccacagagggcattgtacaaccagacagggcaagcccctac 8296037  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||| ||||||||||||||||    
T  8296038 ctgatctgttgcctcccaggttc 8296060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 8301559 - 8301437
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || |||||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  8301559 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggcaagcccccac 8301460  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  8301459 ctgatccgttgcctccaaggttc 8301437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 18330635 - 18330757
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || |||||  |||| |  |||||||| || |||||||||||||||||||| ||||    
T  18330635 gctagacctactttccctccgataccgatgttatatgctgagttgcttccgaccttactccatagagggcattgtacaaccagacagggcaagcccccac 18330734  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  18330735 ctgatccgttgcctccaaggttc 18330757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 196 - 339
Target Start/End: Original strand, 4721597 - 4721740
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  4721597 gctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggcaagcccccac 4721696  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||| ||||||| ||||||   || |||||||| ||||||    
T  4721697 ctgatccgctgcctccaaggttcaggtccgacctcaaatgtgat 4721740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 196 - 339
Target Start/End: Complemental strand, 22387870 - 22387727
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||| ||||||||||| ||||||||| | ||||| ||||| || || ||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  22387870 gctagaccgacttttcctcctataccaatgttgtatgcagagttgcttccaactttactccatagagggcattgtacaaccagacagggcaagcccccac 22387771  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  22387770 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 22387727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 4796945 - 4796823
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || || ||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  4796945 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggcaagcccccac 4796846  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  4796845 ctgatccgttgcctccaaggttc 4796823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 15741386 - 15741264
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  15741386 gctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggcaagcccccac 15741287  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || || |||||||||| ||||||    
T  15741286 ctgattcgttgcctccaaggttc 15741264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 17985248 - 17985126
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||||||||| ||||||||| | ||||| ||| | || || |||||||| |  |||||||| || ||||| |||||||||||||| ||||    
T  17985248 gctagacctacttttcctcctataccaatgttgtatgcagagcttcttccaactctactccagagagggcattgtacaactagacagggcaagccaccac 17985149  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  17985148 ctgatccgttgcctccaaggttc 17985126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 18051228 - 18051350
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || |||||| |||| |  ||||| || || |||||||||||||||||||| ||||    
T  18051228 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccac 18051327  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||| ||||||||||||||    
T  18051328 ctgatccgctgcctcccaggttc 18051350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 197 - 318
Target Start/End: Complemental strand, 6542753 - 6542632
Alignment:
Q  197 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||||| || || ||| |||| |  ||||| ||||||||||| |||||||||||||| |||||    
T  6542753 ctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagaggacactgcacaactagacagggcaagccaccacc 6542654  T
Q  297 taatccgttgcctcccaggttc 318  Q
    | ||||||||||||| ||||||    
T  6542653 tgatccgttgcctccaaggttc 6542632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 196 - 339
Target Start/End: Complemental strand, 5609614 - 5609471
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  5609614 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggcaagccaccac 5609515  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  5609514 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 5609471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 196 - 339
Target Start/End: Original strand, 6192282 - 6192425
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  6192282 gctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggcaagcccccac 6192381  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||| | ||||||| ||||||   || |||||||| ||||||    
T  6192382 ctgatctgctgcctccaaggttcaggtccgacctcaaatgtgat 6192425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 196 - 339
Target Start/End: Complemental strand, 18277344 - 18277201
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  18277344 gctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggcaagcccccac 18277245  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||| ||||||||| ||||||   ||||| ||||| ||||||    
T  18277244 ctgatcagttgcctccaaggttcaggtctgatctcaaatgtgat 18277201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 196 - 339
Target Start/End: Complemental strand, 18292645 - 18292502
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  18292645 gctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggcaagcccccac 18292546  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||| ||||||||| ||||||   ||||| ||||| ||||||    
T  18292545 ctgatcagttgcctccaaggttcaggtctgatctcaaatgtgat 18292502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 196 - 339
Target Start/End: Complemental strand, 18307946 - 18307803
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  18307946 gctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggcaagcccccac 18307847  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||| ||||||||| ||||||   ||||| ||||| ||||||    
T  18307846 ctgatcagttgcctccaaggttcaggtctgatctcaaatgtgat 18307803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 196 - 339
Target Start/End: Original strand, 28339268 - 28339411
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  28339268 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggcaagccaccac 28339367  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  28339368 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 28339411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 196 - 339
Target Start/End: Complemental strand, 29149047 - 29148904
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  29149047 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccaactttactccatagagggcattgtacaactagacagggcaagcccccac 29148948  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  29148947 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 29148904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 196 - 339
Target Start/End: Complemental strand, 31964765 - 31964622
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  31964765 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggcaagccaccac 31964666  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  31964665 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 31964622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 196 - 339
Target Start/End: Complemental strand, 50134363 - 50134220
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  50134363 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggcaagccaccac 50134264  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  50134263 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 50134220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 35880732 - 35880854
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||||| |||||||||||| ||||    
T  35880732 gctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccatagagggcattgtacaaccaaacagggcaagcccccac 35880831  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||| ||||||| ||||||    
T  35880832 ctgatccgctgcctccaaggttc 35880854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 339
Target Start/End: Original strand, 4416885 - 4417028
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| ||||||||||| || ||||    
T  4416885 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggcaaacccccac 4416984  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  4416985 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 4417028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 318
Target Start/End: Original strand, 5713196 - 5713315
Alignment:
Q  199 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 298  Q
    ||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||||     
T  5713196 agacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggtaagcccccacctg 5713295  T
Q  299 atccgttgcctcccaggttc 318  Q
    ||||||||||||| ||||||    
T  5713296 atccgttgcctccaaggttc 5713315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 318
Target Start/End: Original strand, 5724106 - 5724225
Alignment:
Q  199 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 298  Q
    ||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||||     
T  5724106 agacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggtaagcccccacctg 5724205  T
Q  299 atccgttgcctcccaggttc 318  Q
    ||||||||||||| ||||||    
T  5724206 atccgttgcctccaaggttc 5724225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 318
Target Start/End: Complemental strand, 5757371 - 5757252
Alignment:
Q  199 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 298  Q
    ||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||||     
T  5757371 agacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggtaagcccccacctg 5757272  T
Q  299 atccgttgcctcccaggttc 318  Q
    ||||||||||||| ||||||    
T  5757271 atccgttgcctccaaggttc 5757252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 318
Target Start/End: Complemental strand, 5768262 - 5768143
Alignment:
Q  199 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 298  Q
    ||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||||     
T  5768262 agacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggtaagcccccacctg 5768163  T
Q  299 atccgttgcctcccaggttc 318  Q
    ||||||||||||| ||||||    
T  5768162 atccgttgcctccaaggttc 5768143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 339
Target Start/End: Original strand, 10396099 - 10396242
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||| | || || ||| |||| |  ||||| ||||||||||| |||||||| ||||| ||||    
T  10396099 gctagacctactttccctccgatacctatgttgtatgcagagcttcttccaactttactccagagaggacactgcacaactagacagggtaagcccccac 10396198  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  10396199 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 10396242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 339
Target Start/End: Complemental strand, 28116246 - 28116103
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| ||||||| || || || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  28116246 gctagacctactttccctccgataccgatgttatatgctgaattgcttccaactttactccagagagggcattgtacaactagacagggcaagcccccac 28116147  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
     | ||||||||||||| ||||||   ||||| ||||| ||||||    
T  28116146 ttgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 28116103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 318
Target Start/End: Complemental strand, 36997366 - 36997247
Alignment:
Q  199 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 298  Q
    ||||| ||||||||||| ||||||||| | ||||| ||| | || || |||||||| |  |||||||| || ||||| |||||||||||||| ||||||     
T  36997366 agaccaacttttcctcctataccaatgttgtatgcagagcttcttccaactctactccagagagggcattgtacaactagacagggcaagccaccacctg 36997267  T
Q  299 atccgttgcctcccaggttc 318  Q
    ||||||||||||| ||||||    
T  36997266 atccgttgcctccaaggttc 36997247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 7996528 - 7996650
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  7996528 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 7996627  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  7996628 ctgatccgttgcctccaaggttc 7996650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 10643036 - 10643158
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  10643036 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 10643135  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  10643136 ctgatccgttgcctccaaggttc 10643158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 47023419 - 47023541
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  47023419 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 47023518  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  47023519 ctgatccgttgcctccaaggttc 47023541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 196 - 339
Target Start/End: Original strand, 7073178 - 7073321
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||||||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || || || ||||| || ||||| || |    
T  7073178 gctagacctacttttcctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacgactagacaaggtaagcccccgc 7073277  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  7073278 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 7073321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 196 - 339
Target Start/End: Original strand, 21674659 - 21674802
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||| ||||||||||| ||||||||| | ||||| ||  | || || |||||||| |  |||||||| || || || |||||||||||||| ||||    
T  21674659 gctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactctactccaaagagggcattgtacgactagacagggcaagccaccac 21674758  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  21674759 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 21674802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 137
Target Start/End: Complemental strand, 15893178 - 15893060
Alignment:
Q  19 atcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtc 118  Q
    ||||||||||| ||  | |||||||||||||| |||||||  |||||||||| | | || ||||| || |||||||||||||| ||| | ||| ||||||    
T  15893178 atcaatgctgcccaaatgcctccgtcgtacccatatgcgccgtactctcagcatcctttctttccgcccttctatcatcagtaccctttgccaccgggtc 15893079  T
Q  119 tacctcaggtacccgttaa 137  Q
     |||||| |||||||||||    
T  15893078 aacctcaagtacccgttaa 15893060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 339
Target Start/End: Complemental strand, 11110638 - 11110498
Alignment:
Q  199 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 298  Q
    ||||| ||||||||||| ||||||||| | ||||| ||  | || || ||| |||| |  ||||| |||||||| || |||||||| ||||||||||||     
T  11110638 agaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactttactccagagaggacactgcacgactagacagggtaagcctccacctg 11110539  T
Q  299 atccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    ||||||||||||| ||||||   ||||| ||||| ||||||    
T  11110538 atccgttgcctccaaggttcaggtctgatctcaaatgtgat 11110498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 339
Target Start/End: Complemental strand, 4346979 - 4346836
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||| ||||||||||| ||||||||| | ||||| ||  | || || ||| |||| |  ||||| |||||||| || |||||||| ||||| ||||    
T  4346979 gctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactttactccagagaggacactgcacgactagacagggtaagcccccac 4346880  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  4346879 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 4346836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 137
Target Start/End: Complemental strand, 8301736 - 8301618
Alignment:
Q  19 atcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtc 118  Q
    ||||||||||| ||  | |||||||||||| | |||||||  || ||||||| | | || ||||| ||||||||||||||||| ||| | ||| ||||||    
T  8301736 atcaatgctgcccaaatgcctccgtcgtactcatatgcgccgtattctcagcatcctttctttccgccattctatcatcagtaccctttgccaccgggtc 8301637  T
Q  119 tacctcaggtacccgttaa 137  Q
     |||||| |||||||||||    
T  8301636 aacctcaagtacccgttaa 8301618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 318
Target Start/End: Original strand, 18242706 - 18242827
Alignment:
Q  197 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||  | || || ||| |||| |  ||||| || || ||||| |||||||||||||| |||||    
T  18242706 ctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactttactccagagaggacattgtacaactagacagggcaagccaccacc 18242805  T
Q  297 taatccgttgcctcccaggttc 318  Q
    | ||||||||||||| ||||||    
T  18242806 tgatccgttgcctccaaggttc 18242827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 198 - 318
Target Start/End: Original strand, 5466953 - 5467073
Alignment:
Q  198 tagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacct 297  Q
    |||||| ||||||||||  ||||| ||| | ||||| ||  | || || |||||||| |  |||||||| || ||||| |||||||||||||| ||||||    
T  5466953 tagaccaacttttcctcttatacctatgttgtatgcagaactccttccaactctactccagagagggcattgtacaactagacagggcaagccaccacct 5467052  T
Q  298 aatccgttgcctcccaggttc 318  Q
     ||||||||||||| ||||||    
T  5467053 gatccgttgcctccaaggttc 5467073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 18051066 - 18051166
Alignment:
Q  37 cctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgtta 136  Q
    |||||||| ||||| |||||||  || ||||| | | | || ||||| ||||||||||||||||| ||||| ||| |||||| |||||| ||||||||||    
T  18051066 cctccgtcatacccatatgcgccgtattctcaacatcctttctttccgccattctatcatcagtaccctctgccaccgggtcaacctcaagtacccgtta 18051165  T
Q  137 a 137  Q
    |    
T  18051166 a 18051166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 199 - 339
Target Start/End: Original strand, 48465896 - 48466036
Alignment:
Q  199 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 298  Q
    ||||| ||||||||||| ||||||||| | ||||| ||  | || || ||| |||| |  ||||| |||||||| || |||||||| ||||| ||||||     
T  48465896 agaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactttactccaaagaggacactgcacgactagacagggtaagcccccacctg 48465995  T
Q  299 atccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    ||||||||||||| ||||||   ||||| ||||| ||||||    
T  48465996 atccgttgcctccaaggttcaggtctgatctcaaatgtgat 48466036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 339
Target Start/End: Complemental strand, 22871148 - 22871005
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||| ||||||||||| ||||||||| | ||||| ||  | || || |||||||| |  |||||||| || || || || ||||| ||||| ||||    
T  22871148 gctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactctactccagagagggcattgtacgactaggcagggtaagcccccac 22871049  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  22871048 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 22871005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 339
Target Start/End: Complemental strand, 22886207 - 22886064
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||| ||||||||||| ||||||||| | ||||| ||  | || || |||||||| |  |||||||| || || || || ||||| ||||| ||||    
T  22886207 gctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactctactccagagagggcattgtacgactaggcagggtaagcccccac 22886108  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  22886107 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 22886064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 339
Target Start/End: Original strand, 28021241 - 28021384
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||| ||||||||||| ||||||||| | ||||| ||  | || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  28021241 gctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactatactccagagagggcattgtacaactagacagggcaagccaccac 28021340  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || |||| || ||||| ||||||   ||||| ||||| ||||||    
T  28021341 ctgatccattacctccaaggttcaggtctgatctcaaatgtgat 28021384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 51782052 - 51782111
Alignment:
Q  259 agagggcactgcacaaccagacagggcaagcctccacctaatccgttgcctcccaggttc 318  Q
    |||||||| || ||||| |||||||||||||| |||||| ||||||||||||| ||||||    
T  51782052 agagggcattgtacaactagacagggcaagccaccacctgatccgttgcctccaaggttc 51782111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 338
Target Start/End: Original strand, 4893176 - 4893318
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||| ||||||||||| ||||||||| | ||||| ||| | || || ||| |||| |  ||||| |||||||| || || |||||||| |||||||    
T  4893176 gctagaccaacttttcctcctataccaatgttgtatgcagagcttcttccaactttactccagagaggacactgcacgactaggcagggcaaacctccac 4893275  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtga 338  Q
    |  | || || ||||| |||||||| ||||| || ||||||||    
T  4893276 cggaccctttacctccaaggttccactctgatcttaagtgtga 4893318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 137
Target Start/End: Original strand, 35880552 - 35880670
Alignment:
Q  19 atcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtc 118  Q
    |||||||| |||||  | |||||||| ||||| |||| ||  || ||||||| | | || ||||| ||||| ||||||||||| ||||| ||| ||||||    
T  35880552 atcaatgcagctcaaatgcctccgtcatacccatatgtgccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtc 35880651  T
Q  119 tacctcaggtacccgttaa 137  Q
     |||||| |||||||||||    
T  35880652 aacctcaagtacccgttaa 35880670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 318
Target Start/End: Original strand, 5013687 - 5013800
Alignment:
Q  205 acttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacctaatccgt 304  Q
    ||||||||||| ||||||||| | || || ||  | || || |||||||| |  |||||||| || ||||| |||||||| ||||| |||||| ||||||    
T  5013687 acttttcctcctataccaatgttgtacgcggaacttcttccaactctactccagagagggcattgtacaactagacagggtaagcccccacctgatccgt 5013786  T
Q  305 tgcctcccaggttc 318  Q
    ||||||| ||||||    
T  5013787 tgcctccaaggttc 5013800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 197 - 318
Target Start/End: Complemental strand, 5596648 - 5596527
Alignment:
Q  197 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||||| || || ||||| ||||||||| | ||||| ||  | || || |||||||| |  ||||| || || ||||| |||||||||||||| |||||    
T  5596648 ctagaccaaccttccctcctataccaatgttgtatgcagaacttcttccaactctactccagagaggtcattgtacaactagacagggcaagccaccacc 5596549  T
Q  297 taatccgttgcctcccaggttc 318  Q
    | ||||||||||||| ||||||    
T  5596548 tgatccgttgcctccaaggttc 5596527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 296
Target Start/End: Complemental strand, 20577136 - 20577039
Alignment:
Q  199 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||| ||||||||||| ||||| ||| ||||||| ||||| || || ||| |||| |  ||||| |||||||| || || |||||||||||||||||    
T  20577136 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccacc 20577039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 296
Target Start/End: Complemental strand, 29665259 - 29665162
Alignment:
Q  199 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||| ||||||||||| ||||| ||| ||||||| ||||| || || ||| |||| |  ||||| |||||||| || || |||||||||||||||||    
T  29665259 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccacc 29665162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 4797107 - 4797007
Alignment:
Q  37 cctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgtta 136  Q
    |||||||| ||||| |||| ||  || ||||||| | | || ||||| ||||| ||||||||||| ||||| ||| |||||| |||||| ||||||||||    
T  4797107 cctccgtcatacccatatgtgccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtta 4797008  T
Q  137 a 137  Q
    |    
T  4797007 a 4797007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 15741536 - 15741436
Alignment:
Q  37 cctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgtta 136  Q
    |||||||| ||||| |||| ||  || ||||||| | | || ||||| ||||| ||||||||||| ||||| ||| |||||| |||||| ||||||||||    
T  15741536 cctccgtcatacccatatgtgccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtta 15741437  T
Q  137 a 137  Q
    |    
T  15741436 a 15741436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 197 - 296
Target Start/End: Original strand, 20066010 - 20066109
Alignment:
Q  197 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||| | || || ||| |||| |  ||||| |||||||| || || |||||||||||||||||    
T  20066010 ctagaccaacttttcctcctataccaatgttgtatgcagagcttcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccacc 20066109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 259 - 310
Target Start/End: Original strand, 51797141 - 51797192
Alignment:
Q  259 agagggcactgcacaaccagacagggcaagcctccacctaatccgttgcctc 310  Q
    |||||||| || ||||| |||||||||||||| |||||| ||||||||||||    
T  51797141 agagggcattgtacaactagacagggcaagccaccacctgatccgttgcctc 51797192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 339
Target Start/End: Original strand, 8211713 - 8211847
Alignment:
Q  205 acttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacctaatccgt 304  Q
    ||||||||||| ||||||||| | ||||| ||  | || || |||||||| |  |||||||| || || || || ||||| ||||| |||||| ||||||    
T  8211713 acttttcctcctataccaatgttgtatgcagaacttcttccaactctactccagagagggcattgtacgactaggcagggtaagcccccacctgatccgt 8211812  T
Q  305 tgcctcccaggttccattctgacctcaagtgtgat 339  Q
    ||||||| ||||||   ||||| ||||| ||||||    
T  8211813 tgcctccaaggttcaggtctgatctcaaatgtgat 8211847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 18225157 - 18225279
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| ||||| || ||||| ||||||||| | ||||| ||  | || || |||||||| |  ||||| || || ||||| |||||||| ||||| ||||    
T  18225157 gctaggcctaccttccctcctataccaatgttgtatgcagaacttcttccaactctactccagagaggtcattgtacaactagacagggtaagcccccac 18225256  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  18225257 ctgatccgttgcctccaaggttc 18225279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 338
Target Start/End: Original strand, 32439120 - 32439262
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||| ||||||||||| ||||||||| | ||||| ||  | || || ||| |||| |  ||||| |||||||| || || ||||||||||||||||    
T  32439120 gctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccac 32439219  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtga 338  Q
    |  | || || ||||| |||||||  ||||| || ||||||||    
T  32439220 cggaccctttacctccaaggttccgctctgatcttaagtgtga 32439262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 8295779 - 8295879
Alignment:
Q  37 cctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgtta 136  Q
    |||||||| ||||| |||||||  || ||||||| | | || ||||| ||||| ||||||||||| |||||  || |||||| |||||| ||||| ||||    
T  8295779 cctccgtcatacccatatgcgccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgtcaccgggtcaacctcaagtacctgtta 8295878  T
Q  137 a 137  Q
    |    
T  8295879 a 8295879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 196 - 346
Target Start/End: Complemental strand, 2909 - 2759
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  2909 gctagacctacctttcctccgataccaatgctatatgccgagctactcccaactctacttctcagagggcactacacaaccagacagggcaagcctccac 2810  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || ||||||| ||||| ||||||| ||||||||||||||||||| ||||||    
T  2809 ctgatccgttacctcctaggttccgttctgacctcaagtgtgatttccatc 2759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 3092 - 2949
Alignment:
Q  13 atggacatcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccat 112  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||| ||||||||||||||||||||||||||| | ||||    
T  3092 atggacatcaatgctgctcagctacctccgtcgtacccgtacgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccat 2993  T
Q  113 cgggtctacctcaggtacccgttaacgccatcgtttagcaaatg 156  Q
    |||||| ||||||||||||||| || ||| ||||| | ||||||    
T  2992 cgggtcaacctcaggtacccgtcaatgccgtcgttcaacaaatg 2949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 115; Significance: 2e-58; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 196 - 346
Target Start/End: Original strand, 22888484 - 22888634
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| || ||||||||||||||| | ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  22888484 gctagacctaccttccctccgataccaatgttgtatgctgagttactcccgactctatttctcagagggcactgcacaaccagacagggcaagcctccac 22888583  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || ||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  22888584 ctgatccgttgcctcccaggttccgttctgacctcaagtgtgatttccatc 22888634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 196 - 346
Target Start/End: Original strand, 25199043 - 25199193
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25199043 gctagacctaccttttctccgataccaatgttgtatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 25199142  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || ||||||| ||||||||||||| |||||| |||||||||||| ||||||    
T  25199143 ctgatccgttacctcccaggttccgttctgatctcaagtgtgatttccatc 25199193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 196 - 346
Target Start/End: Original strand, 23892220 - 23892370
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| |||||||||||||||||  | ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23892220 gctagacctacctttcctccgataccaatcatgtatgccgagttgcttccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 23892319  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || |||||||||||||||||||||  || |||||||| |||||| ||||||    
T  23892320 ctgatccgttgcctcccaggttccggtccgacctcaaatgtgatttccatc 23892370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 196 - 346
Target Start/End: Complemental strand, 13184796 - 13184646
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||| |||||||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13184796 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 13184697  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || |||| | |||||||| ||||| ||| ||||||||||||||| ||||||    
T  13184696 ctgatccatcgcctcccaagttccgttcggacctcaagtgtgatttccatc 13184646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 196 - 346
Target Start/End: Original strand, 33877261 - 33877411
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||| |||||||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33877261 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 33877360  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || |||| | |||||||| ||||| ||| ||||||||||||||| ||||||    
T  33877361 ctgatccatcgcctcccaagttccgttcggacctcaagtgtgatttccatc 33877411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 13184979 - 13184846
Alignment:
Q  13 atggacatcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccat 112  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||| ||||||||||||||||||||||||||| | ||||    
T  13184979 atggacatcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccat 13184880  T
Q  113 cgggtctacctcaggtacccgttaacgccatcgt 146  Q
    |||||| |||||||||||||||||| ||| ||||    
T  13184879 cgggtcaacctcaggtacccgttaatgccgtcgt 13184846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 13440825 - 13440692
Alignment:
Q  13 atggacatcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccat 112  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||| ||||||||||||||||||||||||||| | ||||    
T  13440825 atggacatcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccat 13440726  T
Q  113 cgggtctacctcaggtacccgttaacgccatcgt 146  Q
    |||||| |||||||||||||||||| ||| ||||    
T  13440725 cgggtcaacctcaggtacccgttaatgccgtcgt 13440692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 13 - 146
Target Start/End: Original strand, 33877078 - 33877211
Alignment:
Q  13 atggacatcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccat 112  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||| ||||||||||||||||||||||||||| | ||||    
T  33877078 atggacatcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccat 33877177  T
Q  113 cgggtctacctcaggtacccgttaacgccatcgt 146  Q
    |||||| |||||||||||||||||| ||| ||||    
T  33877178 cgggtcaacctcaggtacccgttaatgccgtcgt 33877211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 196 - 346
Target Start/End: Original strand, 11325808 - 11325958
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||| |||||||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  11325808 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 11325907  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || |||| | |||||||| ||||| ||| |||||||| |||||| ||||||    
T  11325908 ctgatccatcgcctcccaagttccgttcggacctcaaatgtgatttccatc 11325958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 196 - 346
Target Start/End: Complemental strand, 13440642 - 13440492
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||| |||||||||| |||||||  | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13440642 gctagacctacctttcctctgataccaatgttatatgctaaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 13440543  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || |||| | |||||||| ||||| ||| ||||||||||||||| ||||||    
T  13440542 ctgatccatcgcctcccaagttccgttcggacctcaagtgtgatttccatc 13440492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 196 - 346
Target Start/End: Complemental strand, 29889230 - 29889080
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||| |||||||||| | ||||| ||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  29889230 gctagacctacctttcctctgataccaatgttgtatgctgagctactcccaactctacttctcagagggcactgcaccaccagacagggcaagcctccac 29889131  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || |||||||||||||||||||||  ||||||||||  |||||| ||||||    
T  29889130 ctgatccgttgcctcccaggttccggtctgacctcatatgtgatttccatc 29889080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 11325625 - 11325768
Alignment:
Q  13 atggacatcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccat 112  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||| ||||||||||||||||||||||||||| | ||||    
T  11325625 atggacatcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccat 11325724  T
Q  113 cgggtctacctcaggtacccgttaacgccatcgtttagcaaatg 156  Q
     ||| | |||||||||||||||||| ||| ||||| ||| ||||    
T  11325725 tgggacaacctcaggtacccgttaatgccgtcgttcagcgaatg 11325768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 22 - 156
Target Start/End: Original strand, 22888310 - 22888444
Alignment:
Q  22 aatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctac 121  Q
    |||||||| ||| |||||||||||||||| ||||||| ||||||||||| | |||| ||||||||||||||||||||||||||| | |||||||||| ||    
T  22888310 aatgctgcccagttacctccgtcgtacccatatgcgccatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 22888409  T
Q  122 ctcaggtacccgttaacgccatcgtttagcaaatg 156  Q
    |||||||| ||||||| ||| ||||| ||||||||    
T  22888410 ctcaggtaaccgttaatgccgtcgttcagcaaatg 22888444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 37 - 156
Target Start/End: Original strand, 25198884 - 25199003
Alignment:
Q  37 cctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgtta 136  Q
    |||||||||||||| |||||||  |||||||||| | | || ||||||||||||||||||||||||||| | |||||||||| ||||||||||| |||||    
T  25198884 cctccgtcgtacccatatgcgccgtactctcagcatcctttctttccaccattctatcatcagtatcctttgccatcgggtcaacctcaggtactcgtta 25198983  T
Q  137 acgccatcgtttagcaaatg 156  Q
    ||||| ||||| ||||||||    
T  25198984 acgccgtcgttcagcaaatg 25199003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 196 - 339
Target Start/End: Complemental strand, 23752598 - 23752455
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || |||||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  23752598 gctagacctactttccctccgataccgatgttatatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggcaagcccccac 23752499  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||||||||| ||||||   || |||||||| ||||||    
T  23752498 ctgatccgttgcctccaaggttcaggtccgacctcaaatgtgat 23752455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 37 - 156
Target Start/End: Original strand, 23892058 - 23892177
Alignment:
Q  37 cctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgtta 136  Q
    |||||||||||||| |||||||  |||||||||| | | || |||||| |||||||||||||||||||| | |||||||||| ||||||||||||||| |    
T  23892058 cctccgtcgtacccatatgcgccgtactctcagcatcctttctttccaacattctatcatcagtatcctttgccatcgggtcaacctcaggtacccgtca 23892157  T
Q  137 acgccatcgtttagcaaatg 156  Q
    | ||||||||| ||||||||    
T  23892158 atgccatcgttcagcaaatg 23892177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 11549368 - 11549490
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || |||||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  11549368 gctagacctactttccctccgataccgatgttatatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggcaagcccccac 11549467  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  11549468 ctgatccgttgcctccaaggttc 11549490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 23718136 - 23718014
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || |||||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  23718136 gctagacctactttccctccgataccgatgttatatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggcaagcccccac 23718037  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  23718036 ctgatccgttgcctccaaggttc 23718014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 30934647 - 30934769
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || |||||| |||| |  ||||| || || |||||||||||||||||||| ||||    
T  30934647 gctagacctactttccctccgataccgatgttatatgctgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccac 30934746  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||||||||||    
T  30934747 ctgatccgttgcctcccaggttc 30934769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 24688305 - 24688183
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||  | ||||| ||||| || |||||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  24688305 gctagacctactttccctccgataccgatattgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggcaagcccccac 24688206  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||||||||||    
T  24688205 ctgatccgttgcctcccaggttc 24688183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 24970032 - 24970154
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || |||||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  24970032 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggcaagcccccac 24970131  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  24970132 ctgatccgttgcctccaaggttc 24970154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 196 - 339
Target Start/End: Original strand, 33777501 - 33777644
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || || ||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  33777501 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggcaagcccccac 33777600  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||||||||| ||||||   || |||||||| ||||||    
T  33777601 ctgatccgttgcctccaaggttcaggtccgacctcaaatgtgat 33777644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 2511065 - 2511187
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||||||||    
T  2511065 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggcaagcctccac 2511164  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  2511165 ctgatccgttgcctccaaggttc 2511187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 8665623 - 8665501
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||||||||    
T  8665623 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggcaagcctccac 8665524  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  8665523 ctgatccgttgcctccaaggttc 8665501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 15759005 - 15758883
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||||||||    
T  15759005 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggcaagcctccac 15758906  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  15758905 ctgatccgttgcctccaaggttc 15758883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 196 - 339
Target Start/End: Original strand, 6874319 - 6874462
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||| | || || ||| |||| |  |||||||| || ||||| |||||||||||||||||||    
T  6874319 gctaggcctactttccctccgataccgatgttatatgctgagctgcttccaactttactccagagagggcattgtacaactagacagggcaagcctccac 6874418  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  6874419 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 6874462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 196 - 339
Target Start/End: Complemental strand, 9548691 - 9548548
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| ||||||| || || || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  9548691 gctagacctactttccctccgataccgatgttatatgctgaattgcttccaactttactccaaagagggcattgtacaactagacagggtaagcccccac 9548592  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||||||||| ||||||   ||||| ||||||||||||    
T  9548591 ctgatccgttgcctccaaggttcaggtctgatctcaagtgtgat 9548548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 196 - 339
Target Start/End: Complemental strand, 22999262 - 22999119
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || || ||| |||| |  ||||| || || |||||||||||||||||||| ||||    
T  22999262 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccaactttactccatagaggacattgtacaaccagacagggcaagcccccac 22999163  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||||||||| ||||||   || || ||||||||||||    
T  22999162 ctgatccgttgcctccaaggttcaggtccgatctcaagtgtgat 22999119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 26480406 - 26480528
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  26480406 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggcaagcccccac 26480505  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  26480506 ctgatccgttgcctccaaggttc 26480528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 197 - 339
Target Start/End: Complemental strand, 37671630 - 37671488
Alignment:
Q  197 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||||| || || ||| |||| |  ||||| |||||||| || |||||||||||||| |||||    
T  37671630 ctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagaggacactgcacgactagacagggcaagccaccacc 37671531  T
Q  297 taatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    | ||||||||||||| ||||||   ||||| ||||| ||||||    
T  37671530 tgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 37671488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 339
Target Start/End: Complemental strand, 15658908 - 15658765
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||| ||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  15658908 gctagacctactttccctccaataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggtaagcccccac 15658809  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  15658808 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 15658765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 339
Target Start/End: Original strand, 41674723 - 41674866
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| ||||||| || || || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  41674723 gctagacctactttccctccgataccgatgttatatgctgaattgcttccaactttactccaaagagggcattgtacaactagacagggtaagcccccac 41674822  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  41674823 ctgatccgttgcctccaaggttcagatctgatctcaaatgtgat 41674866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 5637924 - 5638046
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  5637924 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 5638023  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  5638024 ctgatccgttgcctccaaggttc 5638046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 9317465 - 9317587
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  9317465 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 9317564  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  9317565 ctgatccgttgcctccaaggttc 9317587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 12132169 - 12132291
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  12132169 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 12132268  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  12132269 ctgatccgttgcctccaaggttc 12132291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 197 - 339
Target Start/End: Complemental strand, 18500877 - 18500735
Alignment:
Q  197 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||||| ||||||||||| ||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || || || |||||||||||||| |||||    
T  18500877 ctagaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacgactagacagggcaagccaccacc 18500778  T
Q  297 taatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    | ||||||||||||| ||||||   ||||| ||||| ||||||    
T  18500777 tgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 18500735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 197 - 339
Target Start/End: Original strand, 28649250 - 28649392
Alignment:
Q  197 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||||| || || ||| |||| |  |||||||| || || || |||||||||||||| |||||    
T  28649250 ctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagagggcattgtacgactagacagggcaagccaccacc 28649349  T
Q  297 taatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    | ||||||||||||| ||||||   ||||| ||||| ||||||    
T  28649350 tgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 28649392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 30152032 - 30152154
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  30152032 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 30152131  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  30152132 ctgatccgttgcctccaaggttc 30152154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 30168483 - 30168605
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || || || |||||||||||||| ||||    
T  30168483 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacgactagacagggcaagccaccac 30168582  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  30168583 ctgatccgttgcctccaaggttc 30168605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 34616532 - 34616654
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||| ||||||||||| ||||||||| | ||||| ||||| || || |||||||| |  ||||| || || ||||| |||||||| ||||| ||||    
T  34616532 gctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactctactccagagaggacattgtacaactagacagggtaagcccccac 34616631  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  34616632 ctgatccgttgcctccaaggttc 34616654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 318
Target Start/End: Original strand, 31431463 - 31431576
Alignment:
Q  205 acttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacctaatccgt 304  Q
    ||||||||||| ||||||||| | ||||| ||||| || || |||||||| |  |||||||| || || || |||||||||||||| |||||| ||||||    
T  31431463 acttttcctcctataccaatgttgtatgctgagttgcttccaactctactccagagagggcattgtacgactagacagggcaagccaccacctgatccgt 31431562  T
Q  305 tgcctcccaggttc 318  Q
    ||||||| ||||||    
T  31431563 tgcctccaaggttc 31431576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 24969876 - 24969976
Alignment:
Q  37 cctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgtta 136  Q
    |||||||||||||| |||||||  || ||||||| | | || ||||| ||||||||||||||||||||  | ||| |||||| |||||||||||||||||    
T  24969876 cctccgtcgtacccatatgcgccgtattctcagcatcctttctttccgccattctatcatcagtatcccttgccaccgggtcaacctcaggtacccgtta 24969975  T
Q  137 a 137  Q
    |    
T  24969976 a 24969976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 318
Target Start/End: Complemental strand, 31826552 - 31826433
Alignment:
Q  199 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 298  Q
    ||||| ||||||||||| ||||||||| | ||||| ||  | || || |||||||| |  |||||||| || ||||| |||||||||||||| ||||||     
T  31826552 agaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactctactccagagagggcattgtacaactagacagggcaagccaccacctg 31826453  T
Q  299 atccgttgcctcccaggttc 318  Q
    ||||||||||||| ||||||    
T  31826452 atccgttgcctccaaggttc 31826433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 18375560 - 18375438
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||||||||| ||||||||| | ||||| ||  | || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  18375560 gctagacctacttttcctcctataccaatgttgtatgcagatcttcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 18375461  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  18375460 ctgatccgttgcctccaaggttc 18375438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 28959934 - 28959812
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||| ||||||||||| ||||||||| | ||||| ||  | || || |||||||| |  ||||| || || ||||| |||||||||||||| ||||    
T  28959934 gctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactctactccagagaggtcattgtacaactagacagggcaagccaccac 28959835  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  28959834 ctgatccgttgcctccaaggttc 28959812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 339
Target Start/End: Complemental strand, 37771134 - 37770992
Alignment:
Q  197 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||||| || || ||| |||| |  ||||| || || || || |||||||||||||| |||||    
T  37771134 ctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagaggtcattgtacgactagacagggcaagccaccacc 37771035  T
Q  297 taatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    | ||||||||||||| ||||||   ||||| ||||| ||||||    
T  37771034 tgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 37770992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 197 - 318
Target Start/End: Complemental strand, 37358790 - 37358669
Alignment:
Q  197 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||  | || || |||||||| |  ||||| || || ||||| |||||||||||||| |||||    
T  37358790 ctagaccaacttttcctcctataccaatgttgtatgcggaacttcttccaactctactccagagaggtcattgtacaactagacagggcaagccaccacc 37358691  T
Q  297 taatccgttgcctcccaggttc 318  Q
    | ||||||||||||| ||||||    
T  37358690 tgatccgttgcctccaaggttc 37358669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 339
Target Start/End: Complemental strand, 32599620 - 32599477
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||| ||||||||||| ||||||||| | ||||| ||  | || || ||| |||| |  ||||| |||||||| || |||||||| ||||| ||||    
T  32599620 gctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactttactccagagaggacactgcacgactagacagggtaagcccccac 32599521  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  32599520 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 32599477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 318
Target Start/End: Original strand, 3789556 - 3789677
Alignment:
Q  197 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||  | || || ||| |||| |  ||||| |||||||| || |||||||| ||||| |||||    
T  3789556 ctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactttactccagagaggacactgcacgactagacagggtaagcccccacc 3789655  T
Q  297 taatccgttgcctcccaggttc 318  Q
    | ||||||||||||| ||||||    
T  3789656 tgatccgttgcctccaaggttc 3789677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 318
Target Start/End: Original strand, 37754995 - 37755116
Alignment:
Q  197 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||||| || || ||| |||| |  ||||| || || || || ||||| |||||||| |||||    
T  37754995 ctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagaggtcattgtacgactagacaaggcaagccaccacc 37755094  T
Q  297 taatccgttgcctcccaggttc 318  Q
    | ||||||||||||| ||||||    
T  37755095 tgatccgttgcctccaaggttc 37755116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 24688467 - 24688367
Alignment:
Q  37 cctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgtta 136  Q
    |||||||| ||||| |||||||  || ||||| | | | || ||||| ||||||||||||||||| ||||| ||| |||||| |||||| ||||||||||    
T  24688467 cctccgtcatacccatatgcgccgtattctcaacatcctttctttccgccattctatcatcagtaccctctgccaccgggtcaacctcaagtacccgtta 24688368  T
Q  137 a 137  Q
    |    
T  24688367 a 24688367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 30934488 - 30934588
Alignment:
Q  37 cctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgtta 136  Q
    |||||||| ||||| |||| ||  || ||||||| | |||| ||||| ||||| ||||||||||| ||||| ||| |||||| |||||| ||||||||||    
T  30934488 cctccgtcatacccatatgtgccgtattctcagcatcccttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtta 30934587  T
Q  137 a 137  Q
    |    
T  30934588 a 30934588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 199 - 339
Target Start/End: Original strand, 43078269 - 43078409
Alignment:
Q  199 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 298  Q
    ||||| ||||||||||| ||||||||| | ||||| ||  | || || |||||||| |  |||||||| || || || |||||||| ||||| ||||||     
T  43078269 agaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactctactccagagagggcattgtacgactagacagggtaagcccccacctg 43078368  T
Q  299 atccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    ||||||||||||| ||||||   ||||| ||||| ||||||    
T  43078369 atccgttgcctccaaggttcaggtctgatctcaaatgtgat 43078409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 137
Target Start/End: Original strand, 11549248 - 11549306
Alignment:
Q  79 tttccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgttaa 137  Q
    ||||||||||| ||||||||||| ||||| ||| |||||| |||||| |||||||||||    
T  11549248 tttccaccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgttaa 11549306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 338
Target Start/End: Original strand, 33292539 - 33292681
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||| ||||||||||| ||||||||| | ||||| ||| | || || ||| |||| |  ||||| |||||||| || || ||||||||||||||||    
T  33292539 gctagaccaacttttcctcctataccaatgttgtatgcagagcttcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccac 33292638  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtga 338  Q
    |  | || || ||||| |||||||  ||||| || ||||||||    
T  33292639 cggaccctttacctccaaggttccgctctgatcttaagtgtga 33292681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 33516370 - 33516492
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||||||||| ||||||||| | ||||| ||  | || || ||  |||| |  ||||| || || ||||| |||||||||||||| ||||    
T  33516370 gctaggcctacttttcctcctataccaatgttgtatgcagaacttcttccaaccttactccagagaggtcattgtacaactagacagggcaagccaccac 33516469  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  33516470 ctgatccgttgcctccaaggttc 33516492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 137
Target Start/End: Original strand, 33777321 - 33777439
Alignment:
Q  19 atcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtc 118  Q
    |||||||| |||||  | |||||||| ||||| |||| ||  || ||||||| | | || ||||| ||||| ||||||||||| ||||| ||| ||||||    
T  33777321 atcaatgcagctcaaatgcctccgtcatacccatatgtgccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtc 33777420  T
Q  119 tacctcaggtacccgttaa 137  Q
     |||||| |||||||||||    
T  33777421 aacctcaagtacccgttaa 33777439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 296
Target Start/End: Original strand, 24681457 - 24681554
Alignment:
Q  199 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||| ||||||||||| ||||| ||| ||||||| ||||| || || ||| |||| |  ||||| |||||||| || || |||||||||||||||||    
T  24681457 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccacc 24681554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 296
Target Start/End: Original strand, 24723984 - 24724081
Alignment:
Q  199 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||| ||||||||||| ||||| ||| ||||||| ||||| || || ||| |||| |  ||||| |||||||| || || |||||||||||||||||    
T  24723984 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccacc 24724081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 296
Target Start/End: Complemental strand, 40473694 - 40473597
Alignment:
Q  199 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||| ||||||||||| ||||| ||| ||||||| ||||| || || ||| |||| |  ||||| |||||||| || || |||||||||||||||||    
T  40473694 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccacc 40473597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 23718298 - 23718198
Alignment:
Q  37 cctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgtta 136  Q
    |||||||| ||||| |||| ||  || ||||||| | | || ||||| ||||| ||||||||||| ||||| ||| |||||| |||||| ||||||||||    
T  23718298 cctccgtcatacccatatgtgccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtta 23718199  T
Q  137 a 137  Q
    |    
T  23718198 a 23718198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 23752760 - 23752660
Alignment:
Q  37 cctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgtta 136  Q
    |||||||| ||||| |||| ||  || ||||||| | | || ||||| ||||| ||||||||||| ||||| ||| |||||| |||||| ||||||||||    
T  23752760 cctccgtcatacccatatgtgccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtta 23752661  T
Q  137 a 137  Q
    |    
T  23752660 a 23752660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 338
Target Start/End: Complemental strand, 13324976 - 13324835
Alignment:
Q  197 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||  | || || ||| |||| |  ||||| |||||||| || || |||||||||||||||||    
T  13324976 ctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccacc 13324877  T
Q  297 taatccgttgcctcccaggttccattctgacctcaagtgtga 338  Q
      | || || ||||| |||||||  ||||| ||||| |||||    
T  13324876 ggaccctttacctccaaggttccgctctgatctcaaatgtga 13324835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 22999424 - 22999324
Alignment:
Q  37 cctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgtta 136  Q
    |||||||| ||||| |||| ||  || ||||||| | | || ||||| ||||| ||||||||||| ||||| ||  |||||| |||||| ||||||||||    
T  22999424 cctccgtcatacccatatgtgccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccgccgggtcaacctcaagtacccgtta 22999325  T
Q  137 a 137  Q
    |    
T  22999324 a 22999324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 111; Significance: 6e-56; HSPs: 64)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 196 - 346
Target Start/End: Complemental strand, 22457128 - 22456978
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||| |||||||||| | ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  22457128 gctagacctacctttcctctgataccaatgatgtatgccgagttactcccgactctacttctcataaggcactgcacaaccagacagggcaagcctccac 22457029  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || ||||||||||||||||||||| |||| |||||||||||||| ||||||    
T  22457028 ctgatccgttgcctcccaggttccgttcttacctcaagtgtgatttccatc 22456978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 196 - 346
Target Start/End: Complemental strand, 22477467 - 22477317
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||| |||||||||| | ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  22477467 gctagacctacctttcctctgataccaatgatgtatgccgagttactcccgactctacttctcatatggcactgcacaaccagacagggcaagcctccac 22477368  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || ||||||||||||||||||||| |||| |||||||||||||| ||||||    
T  22477367 ctgatccgttgcctcccaggttccgttctaacctcaagtgtgatttccatc 22477317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 196 - 346
Target Start/End: Complemental strand, 27290564 - 27290414
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||| |||||||||| ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  27290564 gctagacctacctttcctctgataccaatgttatatgctgagttgctcccgactctacttctcagagggcactacacaaccagacagggcaagcctccac 27290465  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || ||||||| ||||||| ||||| ||||||||||||||||||| ||||||    
T  27290464 ctgatccgttacctcccaagttccgttctgacctcaagtgtgatttccatc 27290414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 196 - 346
Target Start/End: Complemental strand, 8892504 - 8892354
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||| |||||||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8892504 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 8892405  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || |||| | |||||||| ||||| ||| ||||||||||||||| ||||||    
T  8892404 ctgatccatcgcctcccaagttccgttcggacctcaagtgtgatttccatc 8892354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 196 - 346
Target Start/End: Complemental strand, 8903739 - 8903589
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||| |||||||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8903739 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 8903640  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || |||| | |||||||| ||||| ||| ||||||||||||||| ||||||    
T  8903639 ctgatccatcgcctcccaagttccgttcggacctcaagtgtgatttccatc 8903589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 196 - 346
Target Start/End: Complemental strand, 13522267 - 13522117
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||| |||||||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13522267 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 13522168  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || |||| | |||||||| ||||| ||| ||||||||||||||| ||||||    
T  13522167 ctgatccatcgcctcccaagttccgttcggacctcaagtgtgatttccatc 13522117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 196 - 346
Target Start/End: Complemental strand, 14143479 - 14143329
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||    
T  14143479 gctagacctacctttcctctgataccaatgctatatgctgagttgctcccgactctacttctcagagggcactgcgcaatcagacaggggaagcctccac 14143380  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || ||||||| |||||||||||||  ||||||||||| |||||| ||||||    
T  14143379 ctgatccgttacctcccaggttccggtctgacctcaaatgtgatttccatc 14143329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 196 - 346
Target Start/End: Original strand, 26787946 - 26788096
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||    
T  26787946 gctagacctacctttcctctgataccaatgctatatgctgagttgctcccgactctacttctcagagggcactgcgcaatcagacaggggaagcctccac 26788045  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || ||||||| |||||||||||||  ||||||||||| |||||| ||||||    
T  26788046 ctgatccgttacctcccaggttccggtctgacctcaaatgtgatttccatc 26788096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 196 - 346
Target Start/End: Original strand, 27196319 - 27196469
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||    
T  27196319 gctagacctacctttcctctgataccaatgctatatgctgagttgctcccgactctacttctcagagggcactgcgcaatcagacaggggaagcctccac 27196418  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || ||||||| |||||||||||||  ||||||||||| |||||| ||||||    
T  27196419 ctgatccgttacctcccaggttccggtctgacctcaaatgtgatttccatc 27196469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 196 - 346
Target Start/End: Complemental strand, 27252921 - 27252771
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||    
T  27252921 gctagacctacctttcctctgataccaatgctatatgctgagttgctcccgactctacttctcagagggcactgcgcaatcagacaggggaagcctccac 27252822  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || ||||||| |||||||||||||  ||||||||||| |||||| ||||||    
T  27252821 ctgatccgttacctcccaggttccggtctgacctcaaatgtgatttccatc 27252771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 196 - 346
Target Start/End: Complemental strand, 33374450 - 33374300
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||| |||||||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33374450 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 33374351  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || |||| | |||||||| ||||| ||| ||||||||||||||| ||||||    
T  33374350 ctgatccatcgcctcccaagttccgttcggacctcaagtgtgatttccatc 33374300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 13522450 - 13522317
Alignment:
Q  13 atggacatcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccat 112  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||| ||||||||||||||||||||||||||| | ||||    
T  13522450 atggacatcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccat 13522351  T
Q  113 cgggtctacctcaggtacccgttaacgccatcgt 146  Q
    |||||| |||||||||||||||||| ||| ||||    
T  13522350 cgggtcaacctcaggtacccgttaatgccgtcgt 13522317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 33374633 - 33374500
Alignment:
Q  13 atggacatcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccat 112  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||| ||||||||||||||||||||||||||| | ||||    
T  33374633 atggacatcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccat 33374534  T
Q  113 cgggtctacctcaggtacccgttaacgccatcgt 146  Q
    |||||| |||||||||||||||||| ||| ||||    
T  33374533 cgggtcaacctcaggtacccgttaatgccgtcgt 33374500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 196 - 346
Target Start/End: Original strand, 28162659 - 28162809
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||| |||||||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  28162659 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 28162758  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
     | |||| | |||||||| ||||| ||| ||||||||||||||| ||||||    
T  28162759 ttgatccatcgcctcccaagttccgttcggacctcaagtgtgatttccatc 28162809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 8892687 - 8892544
Alignment:
Q  13 atggacatcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccat 112  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||| ||||||||||| |||||||||||| || | ||||    
T  8892687 atggacatcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattatatcatcagtattctttgccat 8892588  T
Q  113 cgggtctacctcaggtacccgttaacgccatcgtttagcaaatg 156  Q
    |||||| |||||||||||||||||| ||| ||||| ||| ||||    
T  8892587 cgggtcaacctcaggtacccgttaatgccgtcgttcagcgaatg 8892544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 8903922 - 8903779
Alignment:
Q  13 atggacatcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccat 112  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |  ||| |||||||||||||||||||||||| || | ||||    
T  8903922 atggacatcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatctcttctttccaccattctatcatcagtattctttgccat 8903823  T
Q  113 cgggtctacctcaggtacccgttaacgccatcgtttagcaaatg 156  Q
    |||||| |||||||||||||||||| ||| ||||| ||| ||||    
T  8903822 cgggtcaacctcaggtacccgttaatgccgtcgttcagcgaatg 8903779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 28162477 - 28162619
Alignment:
Q  14 tggacatcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatc 113  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | | || ||||||||||||||||||||||||||| | |||||    
T  28162477 tggacatcaatgctgctcagctacctccatcgtacccgtatgcgcaatactctcagcatcctttctttccaccattctatcatcagtatcctttgccatc 28162576  T
Q  114 gggtctacctcaggtacccgttaacgccatcgtttagcaaatg 156  Q
    ||| | |||||||||||||||||| ||| ||||| ||| ||||    
T  28162577 gggacaacctcaggtacccgttaatgccgtcgttcagcgaatg 28162619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 197 - 344
Target Start/End: Original strand, 20160704 - 20160851
Alignment:
Q  197 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    |||||||||| |||||||||||||| ||| ||||||| ||||||||||| ||| |||||| ||||||||| ||||||||||| || ||||||||||||||    
T  20160704 ctagacctacctttcctccgataccgatgttatatgctgagttactcccaactttacttcacagagggcattgcacaaccaggcaaggcaagcctccacc 20160803  T
Q  297 taatccgttgcctcccaggttccattctgacctcaagtgtgatgtcca 344  Q
    | ||||||| ||||||||||||  ||| || |||||||||||| ||||    
T  20160804 tgatccgttacctcccaggttctgttccgatctcaagtgtgatttcca 20160851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 197 - 344
Target Start/End: Complemental strand, 22172127 - 22171980
Alignment:
Q  197 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    |||||||||| |||||||||||||| ||| ||||||| ||||||||||| ||| |||||| ||||||||| ||||||||||| || ||||||||||||||    
T  22172127 ctagacctacctttcctccgataccgatgttatatgctgagttactcccaactttacttcacagagggcattgcacaaccaggcaaggcaagcctccacc 22172028  T
Q  297 taatccgttgcctcccaggttccattctgacctcaagtgtgatgtcca 344  Q
    | ||||||| ||||||||||||  ||| || |||||||||||| ||||    
T  22172027 tgatccgttacctcccaggttctgttccgatctcaagtgtgatttcca 22171980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 22477644 - 22477529
Alignment:
Q  22 aatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctac 121  Q
    |||||||| ||  |||||| |||||||||||||||||| |||||||||| | |||| |||||||||||||||||| |||||||| | |||||||||| ||    
T  22477644 aatgctgcccaattacctctgtcgtacccgtatgcgcagtactctcagcatcccttctttccaccattctatcattagtatcctttgccatcgggtcaac 22477545  T
Q  122 ctcaggtacccgttaa 137  Q
    ||||||||||||||||    
T  22477544 ctcaggtacccgttaa 22477529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 196 - 346
Target Start/End: Complemental strand, 22935074 - 22934924
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || |||||| |||| |  ||||| || || |||||||||||||||||||| ||||    
T  22935074 gctagacctactttccctccgataccgatgttatatgctgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccac 22934975  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || ||||||||||||||||||||   || |||||||| |||||| ||||||    
T  22934974 ctgatccgttgcctcccaggttcaggtccgacctcaaatgtgatttccatc 22934924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 196 - 346
Target Start/End: Complemental strand, 23857519 - 23857369
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || |||||| |||| |  ||||| || || |||||||||||||||||||| ||||    
T  23857519 gctagacctactttccctccgataccgatgttatatgctgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccac 23857420  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || ||||||||||||||||||||   || |||||||| |||||| ||||||    
T  23857419 ctgatccgttgcctcccaggttcaggtccgacctcaaatgtgatttccatc 23857369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 199 - 346
Target Start/End: Complemental strand, 27272771 - 27272624
Alignment:
Q  199 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 298  Q
    ||||||||||| ||||||||||| ||| ||||||| ||||| || ||||||||||| |  |||||||| || |||||||||||||| ||||| ||||||     
T  27272771 agacctactttccctccgataccgatgttatatgctgagttgcttccgactctactccagagagggcattgtacaaccagacagggtaagcccccacctg 27272672  T
Q  299 atccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    |||||| |||||||||||||   || |||||||| |||||| ||||||    
T  27272671 atccgtcgcctcccaggttcaggtccgacctcaaatgtgatttccatc 27272624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 196 - 339
Target Start/End: Original strand, 26918382 - 26918525
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || |||||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  26918382 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggcaagcccccac 26918481  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  26918482 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 26918525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 13299145 - 13299023
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  13299145 gctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggcaagcccccac 13299046  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  13299045 ctgatccgttgcctccaaggttc 13299023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 24304812 - 24304690
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  24304812 gctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggcaagcccccac 24304713  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  24304712 ctgatccgttgcctccaaggttc 24304690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 26989003 - 26989125
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || |||||| |||| |  ||||| || || |||||||||||||||||||| ||||    
T  26989003 gctagacctactttccctccgataccgatgttatatgctgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccac 26989102  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  26989103 ctgatccgttgcctccaaggttc 26989125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 196 - 339
Target Start/End: Original strand, 16749856 - 16749999
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  16749856 gctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccatagagggcattgtacaactagacagggcaagcccccac 16749955  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  16749956 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 16749999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 15424511 - 15424389
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || |||||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  15424511 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaactagacagggcaagcccccac 15424412  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  15424411 ctgatccgttgcctccaaggttc 15424389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 24863719 - 24863841
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || || ||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  24863719 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggcaagcccccac 24863818  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  24863819 ctgatccgttgcctccaaggttc 24863841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 27000075 - 27000197
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || || ||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  27000075 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggcaagcccccac 27000174  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  27000175 ctgatccgttgcctccaaggttc 27000197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 318
Target Start/End: Original strand, 4525289 - 4525410
Alignment:
Q  197 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||||| || || ||| |||| |  ||||| || |||||||| |||||||||||||| |||||    
T  4525289 ctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagaggacattgcacaactagacagggcaagccaccacc 4525388  T
Q  297 taatccgttgcctcccaggttc 318  Q
    | ||||||||||||| ||||||    
T  4525389 tgatccgttgcctccaaggttc 4525410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 339
Target Start/End: Original strand, 29549477 - 29549620
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||| ||||||||||| ||||||||| | ||||| ||| | || || |||||||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  29549477 gctagaccaacttttcctcctataccaatgttgtatgcagagcttcttccaactctactccagagagggcattgtacaactagacagggtaagcccccac 29549576  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  29549577 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 29549620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 318
Target Start/End: Original strand, 4773009 - 4773130
Alignment:
Q  197 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||||| || || ||| |||| |  ||||| |||||||| || |||||||| ||||| |||||    
T  4773009 ctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagaggacactgcacgactagacagggtaagcccccacc 4773108  T
Q  297 taatccgttgcctcccaggttc 318  Q
    | ||||||||||||| ||||||    
T  4773109 tgatccgttgcctccaaggttc 4773130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 318
Target Start/End: Original strand, 3696086 - 3696205
Alignment:
Q  199 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 298  Q
    ||||| ||||||||||| ||||||||| | ||||| ||||| || || ||| |||| |  |||||||| || || || |||||||||||||| ||||||     
T  3696086 agaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagagggcattgtacgactagacagggcaagccaccacctg 3696185  T
Q  299 atccgttgcctcccaggttc 318  Q
    ||||||||||||| ||||||    
T  3696186 atccgttgcctccaaggttc 3696205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 143
Target Start/End: Original strand, 20160588 - 20160650
Alignment:
Q  81 tccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgttaacgccat 143  Q
    ||||||||| || |||||||||||||||||| |||||| |||||||||||||||||| |||||    
T  20160588 tccaccattttaccatcagtatcctctaccaccgggtcaacctcaggtacccgttaatgccat 20160650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 143
Target Start/End: Complemental strand, 22172243 - 22172181
Alignment:
Q  81 tccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgttaacgccat 143  Q
    ||||||||| || |||||||||||||||||| |||||| |||||||||||||||||| |||||    
T  22172243 tccaccattttaccatcagtatcctctaccaccgggtcaacctcaggtacccgttaatgccat 22172181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 29573015 - 29573137
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||| ||||||||||| ||||||||| | ||||| ||||| || || ||| |||| |  ||||| |||||||| || || ||||| ||||| ||||    
T  29573015 gctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggtaagcccccac 29573114  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  29573115 ctgatccgttgcctccaaggttc 29573137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 205 - 318
Target Start/End: Complemental strand, 4545960 - 4545847
Alignment:
Q  205 acttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacctaatccgt 304  Q
    ||||||||||| ||||||||| | ||||| ||||| || || |||||||| |  ||||| || || ||||| |||||||| ||||| |||||| ||||||    
T  4545960 acttttcctcctataccaatgttgtatgctgagttgcttccaactctactccagagaggacattgtacaactagacagggtaagcccccacctgatccgt 4545861  T
Q  305 tgcctcccaggttc 318  Q
    ||||||| ||||||    
T  4545860 tgcctccaaggttc 4545847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 205 - 318
Target Start/End: Complemental strand, 4724319 - 4724206
Alignment:
Q  205 acttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacctaatccgt 304  Q
    ||||||||||| ||||||||| | ||||| ||||| || || |||||||| |  |||||||| || || || ||||| |||||||| |||||| ||||||    
T  4724319 acttttcctcctataccaatgttgtatgctgagttgcttccaactctactccagagagggcattgtacgactagacaaggcaagccaccacctgatccgt 4724220  T
Q  305 tgcctcccaggttc 318  Q
    ||||||| ||||||    
T  4724219 tgcctccaaggttc 4724206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 197 - 318
Target Start/End: Original strand, 4757767 - 4757888
Alignment:
Q  197 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||||| || || ||| |||| |  ||||| || || ||||| |||||||| ||||| |||||    
T  4757767 ctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagaggacattgtacaactagacagggtaagcccccacc 4757866  T
Q  297 taatccgttgcctcccaggttc 318  Q
    | ||||||||||||| ||||||    
T  4757867 tgatccgttgcctccaaggttc 4757888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 205 - 318
Target Start/End: Original strand, 28207465 - 28207578
Alignment:
Q  205 acttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacctaatccgt 304  Q
    ||||||||||| ||||||||| | ||||| ||||| || || |||||||| |  |||||||| || || || ||||| |||||||| |||||| ||||||    
T  28207465 acttttcctcctataccaatgttgtatgctgagttgcttccaactctactccagagagggcattgtacgactagacaaggcaagccaccacctgatccgt 28207564  T
Q  305 tgcctcccaggttc 318  Q
    ||||||| ||||||    
T  28207565 tgcctccaaggttc 28207578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 339
Target Start/End: Original strand, 16674144 - 16674284
Alignment:
Q  199 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 298  Q
    ||||| ||||||||||| ||||||||| | ||||| ||| | || || ||| |||| |  ||||| |||||||| || |||||||| ||||| ||||||     
T  16674144 agaccaacttttcctcctataccaatgttgtatgcagagcttcttccaactttactccagagaggacactgcacgactagacagggtaagcccccacctg 16674243  T
Q  299 atccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    ||||||||||||| ||||||   ||||| ||||| ||||||    
T  16674244 atccgttgcctccaaggttcaggtctgatctcaaatgtgat 16674284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 339
Target Start/End: Complemental strand, 34463537 - 34463397
Alignment:
Q  199 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 298  Q
    ||||| ||||||||||| ||||| ||| ||||||| ||||| || || ||| |||| |  ||||| |||||||| || ||||| || ||||| ||||||     
T  34463537 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactagacaaggaaagcccccacctg 34463438  T
Q  299 atccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    ||||||||||||| ||||||   ||||| ||||| ||||||    
T  34463437 atccgttgcctccaaggttcaggtctgatctcaaatgtgat 34463397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 137
Target Start/End: Complemental strand, 24304992 - 24304874
Alignment:
Q  19 atcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtc 118  Q
    ||||||||||| ||  | |||||||| ||||| |||| ||  || ||||||| | |||| ||||| ||||| ||||||||||| ||||| ||| ||||||    
T  24304992 atcaatgctgcccaaatgcctccgtcatacccatatgtgccgtattctcagcatcccttctttccgccattttatcatcagtaccctctgccaccgggtc 24304893  T
Q  119 tacctcaggtacccgttaa 137  Q
     |||||| |||||||||||    
T  24304892 aacctcaagtacccgttaa 24304874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 197 - 339
Target Start/End: Original strand, 27007730 - 27007872
Alignment:
Q  197 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||  | || || ||| |||| |  ||||| |||||||| || |||||||| ||||| |||||    
T  27007730 ctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactttactccagagaggacactgcacgactagacagggtaagcccccacc 27007829  T
Q  297 taatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    | ||||||||||||| ||||||   ||||| ||||| ||||||    
T  27007830 tgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 27007872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 197 - 339
Target Start/End: Original strand, 27044390 - 27044532
Alignment:
Q  197 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||||| ||||||||||| ||||| ||| | ||||| ||| | || || ||| |||| |  |||||||| || ||||| |||||||||||||| |||||    
T  27044390 ctagaccaacttttcctcctatacctatgttgtatgcagagcttcttccaactttactccaaagagggcattgtacaactagacagggcaagcccccacc 27044489  T
Q  297 taatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    | | ||||||||||| ||||||   ||||| ||||| ||||||    
T  27044490 tgacccgttgcctccaaggttcaggtctgatctcaaatgtgat 27044532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 134
Target Start/End: Complemental strand, 22935233 - 22935136
Alignment:
Q  37 cctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgt 134  Q
    |||||||| ||||| |||||||  || ||||| | | |||| ||||| ||||||||||||||||||||  | ||| |||||| |||||||||||||||    
T  22935233 cctccgtcatacccatatgcgccgtattctcaacatcccttctttccgccattctatcatcagtatcccttgccaccgggtcaacctcaggtacccgt 22935136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 134
Target Start/End: Complemental strand, 23857678 - 23857581
Alignment:
Q  37 cctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgt 134  Q
    |||||||| ||||| |||||||  || ||||| | | |||| ||||| ||||||||||||||||||||  | ||| |||||| |||||||||||||||    
T  23857678 cctccgtcatacccatatgcgccgtattctcaacatcccttctttccgccattctatcatcagtatcccttgccaccgggtcaacctcaggtacccgt 23857581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 318
Target Start/End: Original strand, 27485132 - 27485253
Alignment:
Q  197 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||  | || || ||| |||| |  ||||| || || ||||| |||||||||||||| |||||    
T  27485132 ctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactttactccagagaggacattgtacaactagacagggcaagccaccacc 27485231  T
Q  297 taatccgttgcctcccaggttc 318  Q
    | ||||||||||||| ||||||    
T  27485232 tgatccgttgcctccaaggttc 27485253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 13299307 - 13299207
Alignment:
Q  37 cctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgtta 136  Q
    |||||||| ||||| |||||||  || ||||||| | | || ||||| ||||| ||||||||||| ||||| ||| |||||| |||||| ||||||||||    
T  13299307 cctccgtcatacccatatgcgccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtta 13299208  T
Q  137 a 137  Q
    |    
T  13299207 a 13299207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 15424673 - 15424573
Alignment:
Q  37 cctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgtta 136  Q
    |||||||| ||||| |||||||  || ||||||| | | || ||||| ||||| ||||||||||| ||||| ||| |||||| |||||| ||||||||||    
T  15424673 cctccgtcatacccatatgcgccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtta 15424574  T
Q  137 a 137  Q
    |    
T  15424573 a 15424573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 24863557 - 24863657
Alignment:
Q  37 cctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgtta 136  Q
    |||||||| ||||| |||||||  || ||||||| | | || ||||| ||||||||||||||||| ||||||||| || ||| ||| || ||||||||||    
T  24863557 cctccgtcctacccatatgcgccgtattctcagcatcctttctttccgccattctatcatcagtaccctctaccaccgagtcaaccccaagtacccgtta 24863656  T
Q  137 a 137  Q
    |    
T  24863657 a 24863657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 26777809 - 26777687
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||| || || ||||| ||||| ||| | ||||||||  | || || |||||||| |  ||||| || || ||||| |||||||||||||| ||||    
T  26777809 gctagaccaaccttccctcctataccgatgttgtatgccgaacttcttccaactctactccagagaggtcattgtacaactagacagggcaagccaccac 26777710  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  26777709 ctgatccgttgcctccaaggttc 26777687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 30558210 - 30558088
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||||||||| ||||||||| | ||||| ||  | || || ||  |||| |  ||||| || || ||||| |||||||||||||| ||||    
T  30558210 gctaggcctacttttcctcctataccaatgttgtatgcagaacttcttccaaccttactccagagaggtcattgtacaactagacagggcaagccaccac 30558111  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  30558110 ctgatccgttgcctccaaggttc 30558088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 197 - 318
Target Start/End: Complemental strand, 26116603 - 26116482
Alignment:
Q  197 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||||| ||||||||||| ||||| ||| | ||||| ||  | || |||||| |||| |  ||||| || || || || |||||||||||||| |||||    
T  26116603 ctagaccaacttttcctcctataccgatgttgtatgcagaacttcttccgactttactccagagaggtcattgtacgactagacagggcaagccaccacc 26116504  T
Q  297 taatccgttgcctcccaggttc 318  Q
    | ||||||||||||| ||||||    
T  26116503 tgatccgttgcctccaaggttc 26116482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 197 - 318
Target Start/End: Complemental strand, 27360185 - 27360064
Alignment:
Q  197 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||||| ||||||||||| ||||| ||| | ||||| ||  | || || |||||||| |  ||||| || || ||||| |||||||| ||||| |||||    
T  27360185 ctagaccaacttttcctcctataccgatgttgtatgcagaacttcttccaactctactccagagaggacattgtacaactagacagggtaagcccccacc 27360086  T
Q  297 taatccgttgcctcccaggttc 318  Q
    | ||||||||||||| ||||||    
T  27360085 tgatccgttgcctccaaggttc 27360064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 197 - 318
Target Start/End: Complemental strand, 27450528 - 27450407
Alignment:
Q  197 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||||| ||||||||||| ||||| ||| | ||||| ||  | || || |||||||| |  ||||| || || ||||| |||||||| ||||| |||||    
T  27450528 ctagaccaacttttcctcctataccgatgttgtatgcagaacttcttccaactctactccagagaggacattgtacaactagacagggtaagcccccacc 27450429  T
Q  297 taatccgttgcctcccaggttc 318  Q
    | ||||||||||||| ||||||    
T  27450428 tgatccgttgcctccaaggttc 27450407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 197 - 318
Target Start/End: Original strand, 29501418 - 29501539
Alignment:
Q  197 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||||| || || ||||| ||||||||| | ||||| ||  | || || |||||||| |  ||||| || || ||||| |||||||||||||| |||||    
T  29501418 ctagaccaaccttccctcctataccaatgttgtatgcagaacttcttccaactctactccagagaggtcattgtacaactagacagggcaagccaccacc 29501517  T
Q  297 taatccgttgcctcccaggttc 318  Q
    | ||||||||||||| ||||||    
T  29501518 tgatccgttgcctccaaggttc 29501539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 26988841 - 26988941
Alignment:
Q  37 cctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgtta 136  Q
    |||||||| ||||| |||| ||  || ||||||| | | || ||||| ||||| ||||||||||| ||||| ||| |||||| |||||| ||||||||||    
T  26988841 cctccgtcatacccatatgtgccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtta 26988940  T
Q  137 a 137  Q
    |    
T  26988941 a 26988941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 26999913 - 27000013
Alignment:
Q  37 cctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgtta 136  Q
    |||||||| ||||| |||| ||  || ||||||| | | || ||||| ||||| ||||||||||| ||||| ||| |||||| |||||| ||||||||||    
T  26999913 cctccgtcatacccatatgtgccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtta 27000012  T
Q  137 a 137  Q
    |    
T  27000013 a 27000013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 38 - 137
Target Start/End: Original strand, 16749695 - 16749794
Alignment:
Q  38 ctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgttaa 137  Q
    ||||||| ||||| |||| ||  || ||||||| | | || ||||| ||||| ||||||||||| ||||| ||| |||||| |||||| |||||||||||    
T  16749695 ctccgtcatacccatatgtgccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgttaa 16749794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 197 - 296
Target Start/End: Original strand, 17025280 - 17025379
Alignment:
Q  197 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||  | || || |||||||| |  ||||| |||||||| || || |||||||||||||||||    
T  17025280 ctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactctactccagagaggacactgcacgactaggcagggcaagcctccacc 17025379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 134
Target Start/End: Original strand, 26918202 - 26918317
Alignment:
Q  19 atcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtc 118  Q
    |||||||| |||||  | |||||||| ||||| |||| ||  || ||||||| | | || ||||| ||||| ||||||||||| ||||| ||| ||||||    
T  26918202 atcaatgcagctcaaatgcctccgtcatacccatatgtgccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtc 26918301  T
Q  119 tacctcaggtacccgt 134  Q
     |||||| ||||||||    
T  26918302 aacctcaagtacccgt 26918317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 3e-51; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 196 - 346
Target Start/End: Original strand, 44563106 - 44563256
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||| |||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  44563106 gctagacctacctttcctctgataccaatgctatatgctgagttgctcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 44563205  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || |||| | |||||||| ||||| ||| ||||||||||||||| ||||||    
T  44563206 ctgatccatcgcctcccaagttccgttcggacctcaagtgtgatttccatc 44563256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 19659432 - 19659299
Alignment:
Q  13 atggacatcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccat 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||| | ||||    
T  19659432 atggacatcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccat 19659333  T
Q  113 cgggtctacctcaggtacccgttaacgccatcgt 146  Q
    |||||| |||||||||||||||||| ||| ||||    
T  19659332 cgggtcaacctcaggtacccgttaatgccgtcgt 19659299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 13 - 146
Target Start/End: Original strand, 9354444 - 9354577
Alignment:
Q  13 atggacatcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccat 112  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||| ||||||||||||||||||||||||||| | ||||    
T  9354444 atggacatcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccat 9354543  T
Q  113 cgggtctacctcaggtacccgttaacgccatcgt 146  Q
    |||||| |||||||||||||||||| ||| ||||    
T  9354544 cgggtcaacctcaggtacccgttaatgccgtcgt 9354577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 196 - 346
Target Start/End: Original strand, 9354627 - 9354777
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||| |||||||||| ||||||| || ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  9354627 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctactcctcaaagggcactgcacaaccagacagggcaagcctccac 9354726  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || |||| | |||||||| ||||| ||| ||||||||||||||| ||||||    
T  9354727 ctgatccatcgcctcccaagttccgttcggacctcaagtgtgatttccatc 9354777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 196 - 346
Target Start/End: Complemental strand, 19659249 - 19659099
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||| |||||||||| ||||||| || |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  19659249 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcgctgcacaaccagacagggcaagcctccac 19659150  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || | |||| |||||||| ||||| ||| ||||||||||||||| ||||||    
T  19659149 ctgacccgtcgcctcccaagttccgttcggacctcaagtgtgatttccatc 19659099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 44562923 - 44563047
Alignment:
Q  13 atggacatcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccat 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | || ||||||||||||||||||||||||||| | ||||    
T  44562923 atggacatcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagcatcctttctttccaccattctatcatcagtatcctttgccat 44563022  T
Q  113 cgggtctacctcaggtacccgttaa 137  Q
    |||| | ||||||||||||||||||    
T  44563023 cgggacaacctcaggtacccgttaa 44563047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 199 - 346
Target Start/End: Complemental strand, 22081085 - 22080938
Alignment:
Q  199 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 298  Q
    |||||||| |||||||||||||||||||| || |||||| | ||||||||| | ||||||| |||||||||||||||||| ||||| |||||||||||||    
T  22081085 agacctacctttcctccgataccaatgctgtacgccgagctgctcccgactttgcttctcaaagggcactgcacaaccaggcagggaaagcctccaccta 22080986  T
Q  299 atccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    | ||||||||||||||||||| ||||||||||||||| ||| ||||||    
T  22080985 acccgttgcctcccaggttccgttctgacctcaagtgcgatttccatc 22080938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 196 - 346
Target Start/End: Original strand, 33244670 - 33244820
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| ||||||| |||||||||| ||||||  || |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  33244670 gctagacctacctttcctctgataccaatgttatatgttgaattactcccgactctacttctcaaagggcgctgcacaaccagacagggcaagcctccac 33244769  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || | |||| |||||| | ||||| ||| ||||||||||||||| ||||||    
T  33244770 ctgacccgtcgcctcctaagttccgttcggacctcaagtgtgatttccatc 33244820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 196 - 346
Target Start/End: Original strand, 16283454 - 16283604
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||||||||| || ||||||||||| ||| | ||||| ||||| || |||||| |||| || |||||||| || |||||||||||||||||||| ||||    
T  16283454 gctagacctaccttccctccgataccgatgttgtatgctgagttgcttccgactttactccttagagggcattgtacaaccagacagggcaagcccccac 16283553  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    || ||||||||||||||||||||   || |||||||| |||||| ||||||    
T  16283554 ctgatccgttgcctcccaggttcaggtccgacctcaaatgtgatttccatc 16283604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 16277559 - 16277681
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  16277559 gctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggcaagcccccac 16277658  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||||||||||    
T  16277659 ctgatccgttgcctcccaggttc 16277681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 2137469 - 2137347
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || |||||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  2137469 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggcaagcccccac 2137370  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  2137369 ctgatccgttgcctccaaggttc 2137347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 19688103 - 19688225
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || |||||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  19688103 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggcaagcccccac 19688202  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  19688203 ctgatccgttgcctccaaggttc 19688225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 27609115 - 27608993
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || |||||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  27609115 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggcaagcccccac 27609016  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  27609015 ctgatccgttgcctccaaggttc 27608993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 196 - 339
Target Start/End: Original strand, 31354529 - 31354672
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||||||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||||||||    
T  31354529 gctaggcctactttccctccgataccgatgttatatgccgagttgcttccaactttactccagagagggcattgtacaactagacagggcaagcctccac 31354628  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || |||| |||||||| ||||||   ||||| ||||| ||||||    
T  31354629 ctgatcctttgcctccaaggttcaggtctgatctcaaatgtgat 31354672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 14557629 - 14557751
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||||||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||||||||||||||||||  | |    
T  14557629 gctagacctactttccctccgataccaatgttatatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggcaagccctcgc 14557728  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  14557729 ctgatccgttgcctccaaggttc 14557751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 19208570 - 19208448
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  19208570 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggcaagcccccac 19208471  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  19208470 ctgatccgttgcctccaaggttc 19208448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 31489960 - 31489838
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  31489960 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggcaagccaccac 31489861  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  31489860 ctgatccgttgcctccaaggttc 31489838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 339
Target Start/End: Original strand, 19674446 - 19674589
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| ||||||||||| || ||||    
T  19674446 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggcaaacccccac 19674545  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  19674546 ctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 19674589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 28362165 - 28362043
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  28362165 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 28362066  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  28362065 ctgatccgttgcctccaaggttc 28362043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 318
Target Start/End: Complemental strand, 3329716 - 3329595
Alignment:
Q  197 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||||| || || ||| |||| |  ||||| |||||||| || |||||||| ||||| |||||    
T  3329716 ctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagaggacactgcacgactagacagggtaagcccccacc 3329617  T
Q  297 taatccgttgcctcccaggttc 318  Q
    | ||||||||||||| ||||||    
T  3329616 tgatccgttgcctccaaggttc 3329595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 196 - 339
Target Start/End: Original strand, 18710591 - 18710734
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||| ||||||||||| ||||||||| | ||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| |||||  |||    
T  18710591 gctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggtaagccctcac 18710690  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||| ||||||| ||||||   ||||| ||||||||||||    
T  18710691 ctgatccgctgcctccaaggttcaggtctgatctcaagtgtgat 18710734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 22081263 - 22081125
Alignment:
Q  18 catcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggt 117  Q
    ||||||||||||||||||||||||| |||| | |||   |||||||||||||| | | || || |||||||| ||||| |||||||| | | |  |||||    
T  22081263 catcaatgctgctcagctacctccgccgtatcagtacatgcaatactctcagcatcctttcttcccaccattttatcaccagtatccgccatcgccgggt 22081164  T
Q  118 ctacctcaggtacccgttaacgccatcgtttagcaaatg 156  Q
    | ||||||||||||||| || ||||| | | ||||||||    
T  22081163 caacctcaggtacccgtcaatgccattgctcagcaaatg 22081125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 16283292 - 16283392
Alignment:
Q  37 cctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgtta 136  Q
    |||||||||||||| |||||||  |||||||||| | | || ||||| |||||||||||| |||||||| | ||| | |||| ||||||||||||| |||    
T  16283292 cctccgtcgtacccatatgcgccgtactctcagcatcctttctttccgccattctatcattagtatcctttgccaccaggtcaacctcaggtacccatta 16283391  T
Q  137 a 137  Q
    |    
T  16283392 a 16283392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 318
Target Start/End: Complemental strand, 12092933 - 12092812
Alignment:
Q  197 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||||| ||||||||||| ||||||||| | ||||| ||  | || || |||||||| |  ||||| || || ||||| |||||||| ||||| |||||    
T  12092933 ctagaccaacttttcctcctataccaatgttgtatgcggaacttcttccaactctactccagagaggacattgtacaactagacagggtaagcccccacc 12092834  T
Q  297 taatccgttgcctcccaggttc 318  Q
    | ||||||||||||| ||||||    
T  12092833 tgatccgttgcctccaaggttc 12092812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 16277397 - 16277497
Alignment:
Q  37 cctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgtta 136  Q
    |||||||| ||||| |||||||  || ||||||| | | || ||||| ||||| ||||||||||| ||||| ||| |||||| |||||| ||||||||||    
T  16277397 cctccgtcatacccatatgcgccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtta 16277496  T
Q  137 a 137  Q
    |    
T  16277497 a 16277497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 339
Target Start/End: Original strand, 19286468 - 19286610
Alignment:
Q  197 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||||| ||||||||||| ||||| ||| | ||||| ||| | || || ||| |||| |  |||||||| || ||||| || ||||||||||| |||||    
T  19286468 ctagaccaacttttcctcctatacctatgttgtatgcagagcttcttccaactttactccaaagagggcattgtacaactaggcagggcaagcccccacc 19286567  T
Q  297 taatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    | | ||||||||||| ||||||   ||||| ||||| ||||||    
T  19286568 tgacccgttgcctccaaggttcaggtctgatctcaaatgtgat 19286610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 137
Target Start/End: Original strand, 19687923 - 19688041
Alignment:
Q  19 atcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtc 118  Q
    ||||||||||| ||  | |||||||| ||||| |||||||  || || |||| | | || ||||| ||||||||||| ||||| ||||| ||| ||||||    
T  19687923 atcaatgctgcccaaatgcctccgtcatacccatatgcgccgtattcccagcatcctttctttccgccattctatcaccagtaccctctgccaccgggtc 19688022  T
Q  119 tacctcaggtacccgttaa 137  Q
     |||||| |||||||||||    
T  19688023 aacctcaagtacccgttaa 19688041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 319
Target Start/End: Original strand, 29829328 - 29829450
Alignment:
Q  197 ctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacc 296  Q
    ||||||| ||||||||||| ||||||||| | || || ||  | || || ||| |||| |  |||||||| || || ||||||||||| ||||| |||||    
T  29829328 ctagaccaacttttcctcctataccaatgttgtacgcagaacttcttccaactttactccagagagggcattgtaccaccagacagggtaagcccccacc 29829427  T
Q  297 taatccgttgcctcccaggttcc 319  Q
    | ||||||||||||| |||||||    
T  29829428 tgatccgttgcctccaaggttcc 29829450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 2137631 - 2137531
Alignment:
Q  37 cctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgtta 136  Q
    |||||||| ||||| |||||||  || ||||||| | | || |||||  |||| ||||||||||| ||||| ||| |||||| |||||| ||||||||||    
T  2137631 cctccgtcatacccatatgcgccgtattctcagcatcctttctttccgtcattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtta 2137532  T
Q  137 a 137  Q
    |    
T  2137531 a 2137531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 14557470 - 14557570
Alignment:
Q  37 cctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgtta 136  Q
    |||||||| ||||| |||| ||  || ||||||| | |||| ||||| ||||| ||||||||||| ||||| ||| |||||| |||||| ||||| ||||    
T  14557470 cctccgtcatacccatatgtgccgtattctcagcatcccttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacctgtta 14557569  T
Q  137 a 137  Q
    |    
T  14557570 a 14557570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 137
Target Start/End: Complemental strand, 27609235 - 27609177
Alignment:
Q  79 tttccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgttaa 137  Q
    ||||| ||||| ||||||||||| ||||| ||| |||||| |||||| |||||||||||    
T  27609235 tttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgttaa 27609177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 96; Significance: 5e-47; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 199 - 346
Target Start/End: Original strand, 21569 - 21716
Alignment:
Q  199 agacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccaccta 298  Q
    |||||||| |||||||||||||||||||||||||||||| | ||||||||| | ||||||| ||| |||||||||||||| |||||||||||||||||||    
T  21569 agacctacctttcctccgataccaatgctatatgccgagctgctcccgactttgcttctcaaaggacactgcacaaccaggcagggcaagcctccaccta 21668  T
Q  299 atccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    | | ||||||||||||||||| ||||||||||||||| ||| ||||||    
T  21669 acctgttgcctcccaggttccgttctgacctcaagtgcgatttccatc 21716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 156
Target Start/End: Original strand, 21391 - 21529
Alignment:
Q  18 catcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggt 117  Q
    |||||||||| |||||||||||||| |||||| |||   |||||||||||||| | | || || |||||||||||||| |||||||| | |||  |||||    
T  21391 catcaatgcttctcagctacctccgccgtaccagtacatgcaatactctcagcatcctttcttcccaccattctatcaccagtatccaccaccgccgggt 21490  T
Q  118 ctacctcaggtacccgttaacgccatcgtttagcaaatg 156  Q
    | ||||||||||||||| || ||||| | | ||||||||    
T  21491 caacctcaggtacccgtcaatgccattgctcagcaaatg 21529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 74; Significance: 7e-34; HSPs: 2)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 261 - 346
Target Start/End: Complemental strand, 2103 - 2018
Alignment:
Q  261 agggcactgcacaaccagacagggcaagcctccacctaatccgttgcctcccaggttccattctgacctcaagtgtgatgtccatc 346  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  2103 agggcactgcacaaccagacagggcaagcctccacctgatccgttgcctcccaggttccgttctgacctcaagtgtgatttccatc 2018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 339
Target Start/End: Original strand, 6080 - 6160
Alignment:
Q  259 agagggcactgcacaaccagacagggcaagcctccacctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    |||||||| || || || |||||||||||||| |||||| ||||||||||||| ||||||   ||||| ||||| ||||||    
T  6080 agagggcattgtacgactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgat 6160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 27297 - 27419
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| || |||||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  27297 gctagacctactttccctccgataccgatgttatatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggcaagcccccac 27396  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  27397 ctgatccgttgcctccaaggttc 27419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 27135 - 27235
Alignment:
Q  37 cctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgtta 136  Q
    |||||||| ||||| |||||||  || ||||||| | | || ||||| ||||| ||||||||||| ||||||||| |||||| |||||| ||||||||||    
T  27135 cctccgtcatacccatatgcgccgtattctcagcatcctttctttccgccattttatcatcagtaccctctaccaccgggtcaacctcaagtacccgtta 27234  T
Q  137 a 137  Q
    |    
T  27235 a 27235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 59; Significance: 6e-25; HSPs: 5)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 29768 - 29890
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || |||||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  29768 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggcaagcccccac 29867  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  29868 ctgatccgttgcctccaaggttc 29890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 40320 - 40198
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || |||||| |||| |  |||||||| || |||||||||||||||||||| ||||    
T  40320 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggcaagcccccac 40221  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || |||||||||| |||||||||    
T  40220 ctgatccgttgccccccaggttc 40198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 47236 - 47114
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||| || |||||| |||| |  ||||| || || |||||||||||||||||||| ||||    
T  47236 gctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccac 47137  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  47136 ctgatccgttgcctccaaggttc 47114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 29606 - 29706
Alignment:
Q  37 cctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgtta 136  Q
    ||||| ||||||||||||||||  || ||||||| | | || ||||| ||||||||||||||||| ||| | ||| |||||| |||||| ||||||||||    
T  29606 cctccatcgtacccgtatgcgccgtattctcagcatcctttctttccgccattctatcatcagtaccctttgccaccgggtcaacctcaagtacccgtta 29705  T
Q  137 a 137  Q
    |    
T  29706 a 29706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 134
Target Start/End: Complemental strand, 40482 - 40385
Alignment:
Q  37 cctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtctacctcaggtacccgt 134  Q
    |||||| ||||||| |||||||  || ||||||| | | || ||||  ||||||||||||||||| ||| | ||| |||||| |||||||||||||||    
T  40482 cctccgccgtacccatatgcgccgtattctcagcatcctttctttctgccattctatcatcagtaccctttgccaccgggtcaacctcaggtacccgt 40385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 9317 - 9195
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  9317 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggcaagccaccac 9218  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  9217 ctgatccgttgcctccaaggttc 9195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 20020 - 20142
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||||||||| ||||    
T  20020 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggcaagccaccac 20119  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  20120 ctgatccgttgcctccaaggttc 20142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 381 - 258
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccg-agttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctcca 294  Q
    |||||||||||||| ||||||||||| ||| |||||||   |||| || |||||| |||| |  |||||||| || |||||||||||||||||||| |||    
T  381 gctagacctactttccctccgataccgatgttatatgctttagttgcttccgactttactccatagagggcattgtacaaccagacagggcaagccccca 282  T
Q  295 cctaatccgttgcctcccaggttc 318  Q
    ||  ||||||||||||||| ||||    
T  281 ccggatccgttgcctcccaagttc 258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 137
Target Start/End: Complemental strand, 561 - 443
Alignment:
Q  19 atcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagccttccttatttccaccattctatcatcagtatcctctaccatcgggtc 118  Q
    |||||||| |||||  | |||||||| ||||| |||| ||  || ||||||| | | || ||||| ||||| ||||||||||| ||||| ||| ||||||    
T  561 atcaatgcagctcaaatgcctccgtcatacccatatgtgccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtc 462  T
Q  119 tacctcaggtacccgttaa 137  Q
     |||||| |||||||||||    
T  461 aacctcaagtacccgttaa 443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0350 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 7490 - 7368
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||| || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  7490 gctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 7391  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  7390 ctgatccgttgcctccaaggttc 7368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 196 - 311
Target Start/End: Complemental strand, 26453 - 26338
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    ||||| |||||||||||||| ||||||||| | ||||| ||| | || || |||||||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  26453 gctaggcctacttttcctcctataccaatgttgtatgcagagcttcttccaactctactccagagagggcattgtacaactagacagggtaagcccccac 26354  T
Q  296 ctaatccgttgcctcc 311  Q
    || |||||||||||||    
T  26353 ctgatccgttgcctcc 26338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 15181 - 15059
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||||||||||||||| ||||||||| | ||||| ||  | || || ||| |||| |  |||||||| || ||||| |||||||| ||||| ||||    
T  15181 gctagacctacttttcctcctataccaatgttgtatgcagatcttcttccaactttactccagagagggcattgtacaactagacagggtaagcccccac 15082  T
Q  296 ctaatccgttgcctcccaggttc 318  Q
    || ||||||||||||| ||||||    
T  15081 ctgatccgttgcctccaaggttc 15059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 205 - 318
Target Start/End: Original strand, 7963 - 8076
Alignment:
Q  205 acttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacctaatccgt 304  Q
    ||||||||||| ||||||||| | ||||| ||||| || || |||||||| |  |||||||| || || || ||||| |||||||| |||||| ||||||    
T  7963 acttttcctcctataccaatgttgtatgctgagttgcttccaactctactccagagagggcattgtacgactagacaaggcaagccaccacctgatccgt 8062  T
Q  305 tgcctcccaggttc 318  Q
    ||||||| ||||||    
T  8063 tgcctccaaggttc 8076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 339
Target Start/End: Original strand, 9571 - 9714
Alignment:
Q  196 gctagacctacttttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccac 295  Q
    |||||||| ||||||||||| ||||| ||| | ||||| ||  | || || |||||||| |  |||||||| || || || |||||||||||||| ||||    
T  9571 gctagaccaacttttcctcctatacctatgttgtatgcagaacttcttccaactctactccagagagggcattgtacgactagacagggcaagcccccac 9670  T
Q  296 ctaatccgttgcctcccaggttccattctgacctcaagtgtgat 339  Q
    || ||||||||||||| ||||||   ||||| ||||| ||||||    
T  9671 ctgatccgttgcctccaaggttcagatctgatctcaaatgtgat 9714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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