View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10240_low_8 (Length: 225)
Name: NF10240_low_8
Description: NF10240
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10240_low_8 |
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Alignment Details
Target: chr2 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 6285241 - 6285033
Alignment:
| Q |
1 |
actaaatcggtaatgaatgacatataccttccagaaaactttgagctgaaaagcaatggtgtacatgtattatgtatattatgagttggactgtagtaca |
100 |
Q |
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| T |
6285241 |
actaaatcggtaatgaatgacatataccttccagaaaactttgagctgaaaagcaatggtgtacatgtattatgtatattatgagttggactgtagtaca |
6285142 |
T |
|
| Q |
101 |
ttttatatggttgaaatgtcttaatttgttaaatctgaactgaaatgtcttaatatgcatgtgtcattgcttaaaaaacttgtctggtcggcatgttatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6285141 |
ttttatatggttgaaatgtcttaatttgttaaatctgaactgaaatgtcttaatatgcatgtgtcattgcttaaaaaacttgtctggtcggcatgttatt |
6285042 |
T |
|
| Q |
201 |
taacctttt |
209 |
Q |
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||||||||| |
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| T |
6285041 |
taacctttt |
6285033 |
T |
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