View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10241_low_11 (Length: 236)

Name: NF10241_low_11
Description: NF10241
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10241_low_11
NF10241_low_11
[»] chr3 (49 HSPs)
chr3 (9-236)||(16626932-16627158)
chr3 (9-236)||(18529999-18530226)
chr3 (21-232)||(15893139-15893350)
chr3 (10-206)||(8295578-8295774)
chr3 (10-206)||(8301723-8301919)
chr3 (10-206)||(4797112-4797308)
chr3 (10-206)||(15741541-15741737)
chr3 (10-206)||(18050865-18051061)
chr3 (10-200)||(4721234-4721424)
chr3 (10-200)||(35880369-35880559)
chr3 (10-206)||(29149214-29149410)
chr3 (10-200)||(18330277-18330467)
chr3 (10-200)||(6191919-6192109)
chr3 (10-200)||(8211344-8211534)
chr3 (10-200)||(18277517-18277707)
chr3 (10-200)||(18292818-18293008)
chr3 (10-200)||(18308119-18308309)
chr3 (21-200)||(10395750-10395929)
chr3 (61-200)||(22871339-22871478)
chr3 (61-200)||(22886398-22886537)
chr3 (94-200)||(5466672-5466778)
chr3 (70-200)||(5596831-5596961)
chr3 (10-200)||(7072815-7073005)
chr3 (10-200)||(28116422-28116612)
chr3 (10-200)||(47023056-47023246)
chr3 (93-200)||(18224877-18224984)
chr3 (10-188)||(5013315-5013493)
chr3 (22-200)||(6542939-6543117)
chr3 (93-194)||(4347155-4347256)
chr3 (93-194)||(28020964-28021065)
chr3 (93-188)||(17985433-17985528)
chr3 (61-200)||(18242381-18242520)
chr3 (61-200)||(20577327-20577466)
chr3 (58-188)||(7996213-7996343)
chr3 (58-188)||(10642721-10642851)
chr3 (100-206)||(20065739-20065845)
chr3 (10-200)||(21674296-21674486)
chr3 (70-200)||(36997554-36997684)
chr3 (70-200)||(51781674-51781804)
chr3 (61-200)||(11110826-11110965)
chr3 (94-200)||(4416603-4416709)
chr3 (70-200)||(24327822-24327952)
chr3 (94-200)||(28338989-28339095)
chr3 (94-200)||(31964938-31965044)
chr3 (94-200)||(50134536-50134642)
chr3 (97-200)||(5609787-5609890)
chr3 (70-200)||(51796762-51796893)
chr3 (124-200)||(29665450-29665526)
chr3 (61-200)||(48465569-48465708)
[»] chr2 (36 HSPs)
chr2 (9-236)||(19456795-19457022)
chr2 (9-232)||(21703542-21703765)
chr2 (21-232)||(27434825-27435036)
chr2 (9-191)||(27392630-27392812)
chr2 (10-206)||(23128973-23129169)
chr2 (10-206)||(28881852-28882048)
chr2 (10-206)||(20837556-20837752)
chr2 (10-206)||(12655180-12655376)
chr2 (10-194)||(37374799-37374983)
chr2 (61-200)||(261178-261317)
chr2 (10-200)||(34279087-34279277)
chr2 (93-200)||(12717018-12717125)
chr2 (61-200)||(13936957-13937096)
chr2 (94-200)||(21677595-21677701)
chr2 (61-200)||(12586490-12586629)
chr2 (93-200)||(31876002-31876109)
chr2 (61-200)||(34286043-34286182)
chr2 (61-200)||(34291103-34291242)
chr2 (93-200)||(34861401-34861508)
chr2 (93-200)||(37686322-37686429)
chr2 (93-200)||(37701587-37701694)
chr2 (61-200)||(37925182-37925321)
chr2 (93-200)||(39889783-39889890)
chr2 (61-200)||(9350407-9350546)
chr2 (93-188)||(16829763-16829858)
chr2 (93-188)||(16891623-16891718)
chr2 (61-200)||(27776896-27777035)
chr2 (61-200)||(27803381-27803520)
chr2 (61-200)||(27816663-27816802)
chr2 (61-200)||(40233188-40233327)
chr2 (10-200)||(11635602-11635792)
chr2 (10-200)||(11641791-11641981)
chr2 (70-200)||(19416912-19417042)
chr2 (94-200)||(22926441-22926547)
chr2 (100-188)||(32049526-32049614)
chr2 (61-173)||(39052268-39052380)
[»] scaffold0124 (2 HSPs)
scaffold0124 (9-232)||(20053-20276)
scaffold0124 (10-206)||(30095-30291)
[»] chr4 (23 HSPs)
chr4 (9-236)||(15227529-15227756)
chr4 (11-236)||(15285313-15285538)
chr4 (9-232)||(1899916-1900139)
chr4 (9-210)||(14235939-14236140)
chr4 (10-206)||(14664675-14664871)
chr4 (9-186)||(15391771-15391948)
chr4 (10-206)||(17013657-17013853)
chr4 (10-200)||(24592735-24592925)
chr4 (10-200)||(14763728-14763918)
chr4 (10-200)||(36344936-36345126)
chr4 (10-200)||(6569510-6569700)
chr4 (10-200)||(14098198-14098388)
chr4 (10-200)||(19372918-19373108)
chr4 (93-200)||(31126942-31127049)
chr4 (10-188)||(27163753-27163931)
chr4 (93-200)||(30753482-30753589)
chr4 (61-200)||(54833098-54833237)
chr4 (70-200)||(18801046-18801176)
chr4 (70-200)||(33674234-33674364)
chr4 (22-200)||(40106062-40106240)
chr4 (10-188)||(5005527-5005705)
chr4 (93-188)||(21969441-21969536)
chr4 (61-200)||(39850331-39850470)
[»] chr7 (27 HSPs)
chr7 (21-232)||(16040980-16041191)
chr7 (9-233)||(16450272-16450496)
chr7 (10-206)||(16518720-16518916)
chr7 (10-206)||(16503684-16503880)
chr7 (10-206)||(2154216-2154412)
chr7 (10-206)||(10917169-10917365)
chr7 (10-199)||(11425087-11425276)
chr7 (10-200)||(5127635-5127825)
chr7 (10-200)||(31124554-31124744)
chr7 (58-200)||(45387034-45387176)
chr7 (10-200)||(5147650-5147840)
chr7 (10-200)||(24592851-24593041)
chr7 (61-200)||(9618345-9618484)
chr7 (93-200)||(26275404-26275511)
chr7 (94-200)||(4145433-4145539)
chr7 (10-200)||(16736770-16736960)
chr7 (10-200)||(16751824-16752014)
chr7 (10-200)||(17523175-17523365)
chr7 (10-200)||(17529850-17530040)
chr7 (95-200)||(26320179-26320284)
chr7 (93-200)||(3445020-3445127)
chr7 (70-200)||(11441263-11441393)
chr7 (93-200)||(26486054-26486161)
chr7 (61-200)||(26670224-26670363)
chr7 (93-200)||(31564709-31564816)
chr7 (10-194)||(26434900-26435084)
chr7 (61-200)||(26538183-26538322)
[»] chr1 (6 HSPs)
chr1 (9-236)||(20460748-20460975)
chr1 (9-210)||(16208439-16208640)
chr1 (10-206)||(41793726-41793922)
chr1 (61-200)||(10962362-10962501)
chr1 (61-200)||(51637910-51638049)
chr1 (70-200)||(28584682-28584812)
[»] chr5 (45 HSPs)
chr5 (8-232)||(23891855-23892079)
chr5 (9-232)||(25198682-25198905)
chr5 (10-204)||(24951761-24951955)
chr5 (10-206)||(24688472-24688668)
chr5 (10-206)||(30934287-30934483)
chr5 (10-206)||(23752765-23752961)
chr5 (10-206)||(23718303-23718500)
chr5 (10-206)||(11549005-11549201)
chr5 (11-206)||(22999429-22999624)
chr5 (10-200)||(33777138-33777328)
chr5 (10-200)||(15659081-15659271)
chr5 (22-200)||(40473873-40474051)
chr5 (61-206)||(2510753-2510898)
chr5 (61-200)||(9317153-9317292)
chr5 (61-200)||(6874004-6874143)
chr5 (93-200)||(12131889-12131996)
chr5 (93-200)||(24681171-24681278)
chr5 (93-200)||(24723698-24723805)
chr5 (93-200)||(37771320-37771427)
chr5 (10-200)||(5637561-5637751)
chr5 (94-200)||(8665796-8665902)
chr5 (58-200)||(15759178-15759320)
chr5 (10-188)||(18375745-18375923)
chr5 (10-188)||(30151669-30151847)
chr5 (22-200)||(37358976-37359154)
chr5 (61-194)||(9548870-9549003)
chr5 (70-194)||(41674420-41674544)
chr5 (61-200)||(18501069-18501208)
chr5 (61-200)||(26480094-26480233)
chr5 (61-188)||(30168171-30168298)
chr5 (61-200)||(31431130-31431269)
chr5 (93-200)||(31826740-31826847)
chr5 (93-200)||(37671813-37671920)
chr5 (61-200)||(37754670-37754809)
chr5 (10-200)||(3789177-3789367)
chr5 (61-206)||(34616223-34616368)
chr5 (173-232)||(22888287-22888346)
chr5 (93-188)||(33516090-33516185)
chr5 (10-200)||(43077900-43078090)
chr5 (93-206)||(32599784-32599897)
chr5 (61-200)||(13325165-13325304)
chr5 (70-188)||(28648937-28649055)
chr5 (93-199)||(28960120-28960226)
chr5 (70-200)||(29967387-29967517)
chr5 (70-200)||(30029126-30029256)
[»] chr8 (19 HSPs)
chr8 (10-232)||(16283091-16283313)
chr8 (10-206)||(19687740-19687936)
chr8 (9-203)||(22081252-22081446)
chr8 (10-206)||(16277196-16277392)
chr8 (10-206)||(14557269-14557465)
chr8 (10-206)||(2137636-2137832)
chr8 (10-206)||(27609282-27609478)
chr8 (10-200)||(18710228-18710418)
chr8 (10-200)||(19674080-19674270)
chr8 (70-200)||(31490133-31490263)
chr8 (94-206)||(31354250-31354362)
chr8 (93-200)||(19208743-19208850)
chr8 (61-200)||(19286158-19286297)
chr8 (61-188)||(28362350-28362477)
chr8 (22-200)||(3329902-3330080)
chr8 (22-200)||(29828967-29829145)
chr8 (61-200)||(19518526-19518665)
chr8 (70-200)||(33258425-33258555)
chr8 (10-200)||(12093116-12093306)
[»] scaffold0089 (3 HSPs)
scaffold0089 (10-232)||(29405-29627)
scaffold0089 (10-206)||(40487-40683)
scaffold0089 (10-206)||(47403-47599)
[»] scaffold0109 (1 HSPs)
scaffold0109 (9-201)||(21208-21400)
[»] scaffold0143 (1 HSPs)
scaffold0143 (10-206)||(26934-27130)
[»] chr6 (37 HSPs)
chr6 (10-206)||(13299312-13299508)
chr6 (10-206)||(22935238-22935434)
chr6 (10-206)||(23857683-23857879)
chr6 (10-206)||(24863356-24863552)
chr6 (9-201)||(20160345-20160534)
chr6 (9-201)||(22172297-22172486)
chr6 (10-206)||(15424678-15424874)
chr6 (10-206)||(26988640-26988836)
chr6 (10-206)||(26999712-26999908)
chr6 (61-206)||(24304979-24305124)
chr6 (61-200)||(26918070-26918209)
chr6 (10-194)||(16749493-16749677)
chr6 (10-200)||(29549117-29549307)
chr6 (10-206)||(27044029-27044225)
chr6 (10-200)||(3695702-3695892)
chr6 (10-206)||(17024901-17025097)
chr6 (93-200)||(4525011-4525118)
chr6 (93-200)||(4757483-4757590)
chr6 (61-200)||(4772687-4772826)
chr6 (61-200)||(27007402-27007541)
chr6 (61-200)||(27484807-27484946)
chr6 (93-200)||(29572735-29572842)
chr6 (61-200)||(29501096-29501235)
chr6 (93-188)||(30558395-30558490)
chr6 (61-200)||(34463728-34463867)
chr6 (10-200)||(4546151-4546341)
chr6 (70-200)||(16944394-16944524)
chr6 (167-233)||(22477607-22477673)
chr6 (10-200)||(28207081-28207271)
chr6 (94-194)||(26778000-26778100)
chr6 (93-200)||(27360377-27360484)
chr6 (93-200)||(27450720-27450827)
chr6 (61-200)||(16673817-16673956)
chr6 (22-200)||(4724510-4724688)
chr6 (93-194)||(26116792-26116893)
chr6 (22-203)||(27272947-27273128)
chr6 (22-199)||(27630077-27630254)
[»] scaffold0029 (1 HSPs)
scaffold0029 (10-200)||(554-744)
[»] scaffold0336 (1 HSPs)
scaffold0336 (10-200)||(7874-8064)
[»] scaffold0099 (1 HSPs)
scaffold0099 (10-204)||(48568-48769)
[»] scaffold0144 (1 HSPs)
scaffold0144 (10-200)||(26626-26816)
[»] scaffold0350 (1 HSPs)
scaffold0350 (93-200)||(7663-7770)
[»] scaffold0237 (1 HSPs)
scaffold0237 (10-188)||(15366-15544)
[»] scaffold0038 (1 HSPs)
scaffold0038 (10-200)||(7579-7769)
[»] scaffold0159 (1 HSPs)
scaffold0159 (97-200)||(9490-9593)
[»] scaffold0415 (1 HSPs)
scaffold0415 (61-200)||(5682-5821)
[»] scaffold0496 (1 HSPs)
scaffold0496 (160-200)||(157-197)


Alignment Details
Target: chr3 (Bit Score: 196; Significance: 1e-107; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 9 - 236
Target Start/End: Complemental strand, 16627158 - 16626932
Alignment:
Q  9 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 108  Q
    |||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16627158 tgagatggtcaccatggggactcgcctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 16627059  T
Q  109 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 208  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16627058 ggtaacggtcatcataagaag-aagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 16626960  T
Q  209 tatttccgtcgtacccgtatgcgcaata 236  Q
    ||  |||||||||||||||||| |||||    
T  16626959 tacctccgtcgtacccgtatgcacaata 16626932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 9 - 236
Target Start/End: Original strand, 18529999 - 18530226
Alignment:
Q  9 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 108  Q
    |||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||    
T  18529999 tgagatggtcaccatggggactcgtctagaagaagctgtcagagaaggcattattgtattcgagaaagttgaatcctctgtaaatgcatcaaagagatac 18530098  T
Q  109 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||| |||||||||||||||||||||    
T  18530099 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggaactagtcaatccatggctactgttacccctattaatgctgcccagt 18530198  T
Q  209 tatttccgtcgtacccgtatgcgcaata 236  Q
    ||  ||| ||||||||||||||||||||    
T  18530199 tacctccatcgtacccgtatgcgcaata 18530226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 21 - 232
Target Start/End: Complemental strand, 15893350 - 15893139
Alignment:
Q  21 catggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcat 120  Q
    |||||| |||||||| ||||||||| |||||||||| || ||||| |||||||||| ||||||||| |  |||||||||||||||||  ||||||| ||     
T  15893350 catgggaactcgtctggaagaagctgtcagagaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatagtaacggacac 15893251  T
Q  121 cataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagttatttccgtcgt 220  Q
    || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||  |   ||||||||    
T  15893250 cacaagaagaaagaaacggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctatcaatgctgcccaaatgcctccgtcgt 15893151  T
Q  221 acccgtatgcgc 232  Q
    |||| |||||||    
T  15893150 acccatatgcgc 15893139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 10 - 206
Target Start/End: Original strand, 8295578 - 8295774
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| |||||||| ||||||||  |||  || || || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  8295578 gagatggtcaccatgggaactcgtctggaagaagccgtcaaggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 8295677  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    |||| || || || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  8295678 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctatcaatgcagccca 8295774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 10 - 206
Target Start/End: Complemental strand, 8301919 - 8301723
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| |||||||| ||||||||  |||| ||||| || ||||| |||||||||| ||||||||| |  ||||| ||||||||||| |    
T  8301919 gagatggtcaccatgggaactcgtctggaagaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcgtcaaagaggtatg 8301820  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    |||| || || || |||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||||||    
T  8301819 gtaatggacaccacaagaagaaagaaacggaagtatggatggtgtctgccggagccggtcaatccatggctattgttgctcctatcaatgctgccca 8301723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 206
Target Start/End: Complemental strand, 4797308 - 4797112
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| ||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  4797308 gagatggtcaccatgggaacccgtctggaggaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 4797209  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  4797208 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 4797112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 206
Target Start/End: Complemental strand, 15741737 - 15741541
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| |||||||| ||||||||  |||| || || || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  15741737 gagatggtcaccatgggaactcgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 15741638  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    | || || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  15741637 gcaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 15741541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 206
Target Start/End: Original strand, 18050865 - 18051061
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| ||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  18050865 gagatggtcaccatgggaacccgtctggaggaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 18050964  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  18050965 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 18051061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 200
Target Start/End: Original strand, 4721234 - 4721424
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  4721234 gagatggtcaccatgggaacccgtctggaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 4721333  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| |||||    
T  4721334 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgc 4721424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 200
Target Start/End: Original strand, 35880369 - 35880559
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  35880369 gagatggtcaccatgggaacccgtctggaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 35880468  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| |||||    
T  35880469 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgc 35880559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 206
Target Start/End: Complemental strand, 29149410 - 29149214
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  29149410 gagatggtcaccatgggaacccgtctggaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 29149311  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    |||| || || || |||||||||||||| |||||||||||||| || || |||||||||||||||||||||||| |||| ||||| ||||| |||||    
T  29149310 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactattgctcctatcaatgcagccca 29149214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 200
Target Start/End: Original strand, 18330277 - 18330467
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || |||||  ||||||||| ||||||||| |  |||||||| |||||||| |    
T  18330277 gagatggtcaccatgggaacccgtctggaggaagccgtcagggatggaatcattgtgctcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 18330376  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| |||||    
T  18330377 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgc 18330467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 10 - 200
Target Start/End: Original strand, 6191919 - 6192109
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  6191919 gagatggtcaccatgggaacccgtctggaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 6192018  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| |||||| ||||||| || |  ||||||||||||||||||||||||||||| ||||| |||||    
T  6192019 gtaatggacaccacaagaagaaagaaacggaagtatggatggtgtcagttggagccggtcaatccatggctactgttgctcctatcaatgc 6192109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 200
Target Start/End: Original strand, 8211344 - 8211534
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||| ||||| || | |||||| |||||||| |    
T  8211344 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgagtcctctgcgagtgcatcgaagaggtatg 8211443  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||||||||| ||||| |||||    
T  8211444 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgc 8211534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 200
Target Start/End: Complemental strand, 18277707 - 18277517
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  18277707 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 18277608  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||| |||||||| ||||| |||||    
T  18277607 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggccactgttgctcctatcaatgc 18277517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 200
Target Start/End: Complemental strand, 18293008 - 18292818
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  18293008 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 18292909  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||| |||||||| ||||| |||||    
T  18292908 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggccactgttgctcctatcaatgc 18292818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 200
Target Start/End: Complemental strand, 18308309 - 18308119
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  18308309 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 18308210  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||| |||||||| ||||| |||||    
T  18308209 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggccactgttgctcctatcaatgc 18308119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 200
Target Start/End: Original strand, 10395750 - 10395929
Alignment:
Q  21 catggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcat 120  Q
    |||||| || ||||| || |||||  |||| || || |||||||| || ||||||| ||||||||| |  |||||||| ||||| || ||||| || ||     
T  10395750 catgggaacccgtcttgaggaagccgtcagggatggaattattgtgtttgagaaagctgaatcctctgtgaatgcatcgaagagatatggtaatggacac 10395849  T
Q  121 cataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| ||||| ||||| |||||    
T  10395850 cacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctaccgttgctcctatcaatgc 10395929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 200
Target Start/End: Complemental strand, 22871478 - 22871339
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| || | |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  22871478 attgtgtttgagaaagctgaatcctctgcgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 22871379  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  22871378 gagccggtcaatctatggctactgttgcacctatcaatgc 22871339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 200
Target Start/End: Complemental strand, 22886537 - 22886398
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| || | |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  22886537 attgtgtttgagaaagctgaatcctctgcgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 22886438  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  22886437 gagccggtcaatctatggctactgttgcacctatcaatgc 22886398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 94 - 200
Target Start/End: Original strand, 5466672 - 5466778
Alignment:
Q  94 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgccccta 193  Q
    |||||||||||||| ||||| || || || |||||||||||||| ||||| |||||||| || ||||||||||||||||| |||||||||||||| ||||    
T  5466672 gcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagccggagccggtcaatctatggctactgttgcaccta 5466771  T
Q  194 ttaatgc 200  Q
    | |||||    
T  5466772 tcaatgc 5466778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 70 - 200
Target Start/End: Complemental strand, 5596961 - 5596831
Alignment:
Q  70 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 169  Q
    ||||||||||||||||| || | |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||    
T  5596961 gagaaagttgaatcctctgcgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtc 5596862  T
Q  170 aatccatggctactgttgcccctattaatgc 200  Q
    |||| |||||||| ||||| ||||| |||||    
T  5596861 aatcaatggctaccgttgctcctatcaatgc 5596831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 200
Target Start/End: Original strand, 7072815 - 7073005
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| |  ||||| || |||||||| |    
T  7072815 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagaggtatg 7072914  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||| |||||||||||||||||||||| ||||| |||||    
T  7072915 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccagtcaatccatggctactgttgctcctatcaatgc 7073005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 200
Target Start/End: Complemental strand, 28116612 - 28116422
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || |||||||| || ||||||| |||||| ||  | | |||||| |||||||| |    
T  28116612 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaattattgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatg 28116513  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| ||||| ||||| |||||    
T  28116512 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctaccgttgctcctatcaatgc 28116422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 200
Target Start/End: Original strand, 47023056 - 47023246
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || |||||||  |||||||| |  |||||||| |||||||| |    
T  47023056 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagccgaatcctctgtgaatgcatcgaagaggtatg 47023155  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| ||||| |||||    
T  47023156 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcctatcaatgc 47023246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 93 - 200
Target Start/End: Original strand, 18224877 - 18224984
Alignment:
Q  93 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 192  Q
    |||||| || ||||||||||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||||| |||    
T  18224877 tgcatcgaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctggagccggtcaatcaatggctactgttgctcct 18224976  T
Q  193 attaatgc 200  Q
    || |||||    
T  18224977 atcaatgc 18224984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 188
Target Start/End: Original strand, 5013315 - 5013493
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| ||  | | |||||| || |||||||    
T  5013315 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaaaaggtacg 5013414  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgc 188  Q
    |||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| ||||||||||||||    
T  5013415 gtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctggagccggtcaatcaatggctactgttgc 5013493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 200
Target Start/End: Complemental strand, 6543117 - 6542939
Alignment:
Q  22 atggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatc 121  Q
    ||||| || ||||| || |||||  ||||||| || || ||||| || ||||||| |||||| ||  | | |||||| |||||||| ||||| || || |    
T  6543117 atgggaacccgtcttgaggaagcagtcagagatgggatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatggtaatggacacc 6543018  T
Q  122 ataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    | |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| ||||| |||||    
T  6543017 acaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgcacctatcaatgc 6542939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 4347256 - 4347155
Alignment:
Q  93 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 192  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||||||||| |||    
T  4347256 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctactgttgctcct 4347157  T
Q  193 at 194  Q
    ||    
T  4347156 at 4347155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 28020964 - 28021065
Alignment:
Q  93 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 192  Q
    ||||||||||||||| |||||||| || || |||||||| ||||| ||||| |||||||| || || |||||||| |||||||||||||||||||| |||    
T  28020964 tgcatcaaagaggtatggtaacggacaccacaagaagaaggaaacggaagtggggatggtgtcagctggagccgggcaatccatggctactgttgctcct 28021063  T
Q  193 at 194  Q
    ||    
T  28021064 at 28021065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 17985528 - 17985433
Alignment:
Q  93 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgc 188  Q
    ||||||||| ||||||||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| |||||    
T  17985528 tgcatcaaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctaccgttgc 17985433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 61 - 200
Target Start/End: Original strand, 18242381 - 18242520
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || ||||    
T  18242381 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagccg 18242480  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    ||||||||||||| |||||||| ||||| ||||| |||||    
T  18242481 gagccggtcaatcaatggctaccgttgctcctatcaatgc 18242520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 61 - 200
Target Start/End: Complemental strand, 20577466 - 20577327
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  20577466 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 20577367  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  20577366 gagccggtcaatcaatggctactgttgctcctatcaatgc 20577327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 58 - 188
Target Start/End: Original strand, 7996213 - 7996343
Alignment:
Q  58 attattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctg 157  Q
    |||||||| || ||||||| |||||| || || | ||| || |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || |    
T  7996213 attattgtgtttgagaaagctgaatcttctgcgagtgcctcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcag 7996312  T
Q  158 ccggagccggtcaatccatggctactgttgc 188  Q
    | |||||||||||||| ||||||||||||||    
T  7996313 ctggagccggtcaatcaatggctactgttgc 7996343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 58 - 188
Target Start/End: Original strand, 10642721 - 10642851
Alignment:
Q  58 attattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctg 157  Q
    |||||||| || ||||||| |||||| || || | ||| || |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || |    
T  10642721 attattgtgtttgagaaagctgaatcttctgcgagtgcctcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcag 10642820  T
Q  158 ccggagccggtcaatccatggctactgttgc 188  Q
    | |||||||||||||| ||||||||||||||    
T  10642821 ctggagccggtcaatcaatggctactgttgc 10642851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 100 - 206
Target Start/End: Original strand, 20065739 - 20065845
Alignment:
Q  100 aagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatg 199  Q
    |||||||| ||||| || ||||| ||||||||||| || ||||| |||||||| || || |||||||||||||||||||| |||||||| ||||| ||||    
T  20065739 aagaggtatggtaatggacatcacaagaagaaagatacggaagtggggatggtgtcagctggagccggtcaatccatggccactgttgctcctatcaatg 20065838  T
Q  200 ctgccca 206  Q
    | |||||    
T  20065839 cagccca 20065845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 200
Target Start/End: Original strand, 21674296 - 21674486
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| |  |||||||| ||||| || |    
T  21674296 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgaatgcatcgaagagatatg 21674395  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||| |||||||||| || || ||||| |||||    
T  21674396 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaacccatggctaccgtggctcctatcaatgc 21674486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 70 - 200
Target Start/End: Complemental strand, 36997684 - 36997554
Alignment:
Q  70 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 169  Q
    ||||||| ||||||||| | |||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||    
T  36997684 gagaaagctgaatcctctgtaaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtc 36997585  T
Q  170 aatccatggctactgttgcccctattaatgc 200  Q
    |||| |||||||| ||||| ||||| |||||    
T  36997584 aatcaatggctaccgttgctcctatcaatgc 36997554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 70 - 200
Target Start/End: Original strand, 51781674 - 51781804
Alignment:
Q  70 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 169  Q
    ||||||| ||||||||| | |||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||    
T  51781674 gagaaagctgaatcctctgtaaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtc 51781773  T
Q  170 aatccatggctactgttgcccctattaatgc 200  Q
    |||| |||||||| ||||| ||||| |||||    
T  51781774 aatcaatggctaccgttgctcctatcaatgc 51781804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 61 - 200
Target Start/End: Complemental strand, 11110965 - 11110826
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||| ||||| ||||| |||||||| || || |    
T  11110965 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaggaaacggaagtggggatggtgtcagctg 11110866  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||||||||||||||||||||| ||||| ||||| |||||    
T  11110865 gagccggtcaatccatggctaccgttgctcctatcaatgc 11110826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 94 - 200
Target Start/End: Original strand, 4416603 - 4416709
Alignment:
Q  94 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgccccta 193  Q
    ||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||| |||||||||| ||||    
T  4416603 gcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatgactactgttgctccta 4416702  T
Q  194 ttaatgc 200  Q
    | |||||    
T  4416703 tcaatgc 4416709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 70 - 200
Target Start/End: Original strand, 24327822 - 24327952
Alignment:
Q  70 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 169  Q
    ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||| |    
T  24327822 gagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccgggc 24327921  T
Q  170 aatccatggctactgttgcccctattaatgc 200  Q
    |||| |||||||||||||| ||||| |||||    
T  24327922 aatcaatggctactgttgctcctatcaatgc 24327952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 94 - 200
Target Start/End: Original strand, 28338989 - 28339095
Alignment:
Q  94 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgccccta 193  Q
    ||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| || || ||||    
T  28338989 gcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgggagccggtcaatccatggctaccgtcgctccta 28339088  T
Q  194 ttaatgc 200  Q
    | |||||    
T  28339089 tcaatgc 28339095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 94 - 200
Target Start/End: Complemental strand, 31965044 - 31964938
Alignment:
Q  94 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgccccta 193  Q
    ||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| || || ||||    
T  31965044 gcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgggagccggtcaatccatggctaccgtcgctccta 31964945  T
Q  194 ttaatgc 200  Q
    | |||||    
T  31964944 tcaatgc 31964938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 94 - 200
Target Start/End: Complemental strand, 50134642 - 50134536
Alignment:
Q  94 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgccccta 193  Q
    ||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| || || ||||    
T  50134642 gcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgggagccggtcaatccatggctaccgtcgctccta 50134543  T
Q  194 ttaatgc 200  Q
    | |||||    
T  50134542 tcaatgc 50134536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 200
Target Start/End: Complemental strand, 5609890 - 5609787
Alignment:
Q  97 tcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctatta 196  Q
    |||||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| || || ||||| |    
T  5609890 tcaaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgggagccggtcaatccatggctaccgtcgctcctatca 5609791  T
Q  197 atgc 200  Q
    ||||    
T  5609790 atgc 5609787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 70 - 200
Target Start/End: Original strand, 51796762 - 51796893
Alignment:
Q  70 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggt-catcataagaagaaagaaacagaagtagggatggtatctgccggagccggt 168  Q
    ||||||| ||||||||| | |||||| || ||||| || ||||| ||  || || |||||||||||||| ||||| |||||||| || || |||||||||    
T  51796762 gagaaagctgaatcctctgtaaatgcgtcgaagagatatggtaatggcacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggt 51796861  T
Q  169 caatccatggctactgttgcccctattaatgc 200  Q
    ||||| |||||||| ||||| ||||| |||||    
T  51796862 caatcaatggctaccgttgctcctatcaatgc 51796893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 200
Target Start/End: Complemental strand, 29665526 - 29665450
Alignment:
Q  124 aagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||| ||||| ||||| |||||    
T  29665526 aagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctaccgttgctcctatcaatgc 29665450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 61 - 200
Target Start/End: Original strand, 48465569 - 48465708
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| || ||||| || || |    
T  48465569 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctg 48465668  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    ||||||||||||| || ||||| ||||| ||||| |||||    
T  48465669 gagccggtcaatcaatagctaccgttgctcctatcaatgc 48465708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 196; Significance: 1e-107; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 9 - 236
Target Start/End: Complemental strand, 19457022 - 19456795
Alignment:
Q  9 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 108  Q
    |||||||| || |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19457022 tgagatggtcaccatggggactcgcctagaagaagctgtcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 19456923  T
Q  109 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  19456922 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagctggtcaatccatggctactgttgcccctattaatgctgcccagt 19456823  T
Q  209 tatttccgtcgtacccgtatgcgcaata 236  Q
    ||  |||||||||||| |||||||||||    
T  19456822 tacctccgtcgtacccatatgcgcaata 19456795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 9 - 232
Target Start/End: Complemental strand, 21703765 - 21703542
Alignment:
Q  9 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 108  Q
    |||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||    
T  21703765 tgagatggtcaccatggggactcgtctagaagaagctgtcagagaaggcattattgtattcgagaaagttgaatcctctgtaaatgcatcaaagagatac 21703666  T
Q  109 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  21703665 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcctagt 21703566  T
Q  209 tatttccgtcgtacccgtatgcgc 232  Q
    ||  |||||||||||| |||||||    
T  21703565 tacctccgtcgtacccatatgcgc 21703542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 21 - 232
Target Start/End: Complemental strand, 27435036 - 27434825
Alignment:
Q  21 catggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcat 120  Q
    |||||| |||||||| ||||||||  |||||||||| || ||||| ||||| |||| ||||||||| |  ||||||||||||||||| |||||||| ||     
T  27435036 catgggaactcgtctggaagaagccgtcagagaaggaatcattgtgttcgaaaaagctgaatcctctgtgaatgcatcaaagaggtatggtaacggacac 27434937  T
Q  121 cataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagttatttccgtcgt 220  Q
    || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||  |   ||||||||    
T  27434936 cacaagaagaaagaaacggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctattaatgctgcccaaatgcctccgtcgt 27434837  T
Q  221 acccgtatgcgc 232  Q
    |||| |||||||    
T  27434836 acccatatgcgc 27434825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 9 - 191
Target Start/End: Original strand, 27392630 - 27392812
Alignment:
Q  9 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 108  Q
    |||||||| || |||||| || ||  ||||||| ||| ||||||| ||||||||||| || ||||||| ||||||||| ||||||||||||| || |||     
T  27392630 tgagatggtcaccatgggaacccgcttagaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtat 27392729  T
Q  109 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccc 191  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||  ||||||||||||||||    
T  27392730 ggtaatggtcatcataagaagaaagagacagaagtagggatggtatctgccggaaccagtcaatctgtggctactgttgcccc 27392812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 10 - 206
Target Start/End: Complemental strand, 23129169 - 23128973
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| ||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  23129169 gagatggtcaccatgggaacccgtctggaggaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 23129070  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    ||||||| || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  23129069 gtaacggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 23128973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 10 - 206
Target Start/End: Original strand, 28881852 - 28882048
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| |||||||| ||||||||| |||| || || || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  28881852 gagatggtcaccatgggaactcgtctggaagaagctgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 28881951  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    |||| || || || |||||||||||||| ||| |||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  28881952 gtaatggacaccacaagaagaaagaaacggaaatagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 28882048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 206
Target Start/End: Original strand, 20837556 - 20837752
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| |||||||| || |||||  |||| ||||| || ||||| |||||||||| ||||||| | |  ||||||||||||||||| |    
T  20837556 gagatggtcaccatgggaactcgtctggaggaagccgtcagggaaggaatcattgtgttcgagaaagctgaatccactgtgaatgcatcaaagaggtatg 20837655  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    |||| || || || |||||||||||||| |||||||| ||||| || | |||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  20837656 gtaatggacaccacaagaagaaagaaacggaagtaggaatggtgtcagtcggagccggtcaatccatggctactgttgctcctatcaatgcagccca 20837752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 10 - 206
Target Start/End: Original strand, 12655180 - 12655376
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| ||||| || ||||| |||||||||| |||| |||| |  ||||||||||||||||| |    
T  12655180 gagatggtcaccatgggaacccgtctggaggaagccgtcagggaaggaatcattgtgttcgagaaagctgaaccctctgtgaatgcatcaaagaggtatg 12655279  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    |||| || || || |||||||||||||| |||||||| ||||| || | |||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  12655280 gtaatggacaccacaagaagaaagaaacggaagtaggaatggtgtcagtcggagccggtcaatccatggctactgttgctcctatcaatgcagccca 12655376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 194
Target Start/End: Original strand, 37374799 - 37374983
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  37374799 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 37374898  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctat 194  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||||    
T  37374899 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcctat 37374983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 200
Target Start/End: Complemental strand, 261317 - 261178
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| |  |||||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  261317 attgtgtttgagaaagctgaatcctctgtgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 261218  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  261217 gagccggtcaatcaatggctactgttgctcctatcaatgc 261178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 200
Target Start/End: Original strand, 34279087 - 34279277
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| |  ||| | || |||||||| |    
T  34279087 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgaatacgtcgaagaggtatg 34279186  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||||||||| ||||| |||||    
T  34279187 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgggagccggtcaatccatggctactgttgctcctatcaatgc 34279277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 93 - 200
Target Start/End: Complemental strand, 12717125 - 12717018
Alignment:
Q  93 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 192  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||||||||| |||    
T  12717125 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctactgttgcacct 12717026  T
Q  193 attaatgc 200  Q
    || |||||    
T  12717025 atcaatgc 12717018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 61 - 200
Target Start/End: Complemental strand, 13937096 - 13936957
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  13937096 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 13936997  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||||||||||||||||||||||||||| ||||| |||||    
T  13936996 gagccggtcaatccatggctactgttgctcctatcaatgc 13936957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 94 - 200
Target Start/End: Complemental strand, 21677701 - 21677595
Alignment:
Q  94 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgccccta 193  Q
    ||||| |||||||| ||||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||||| ||||    
T  21677701 gcatcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctggagccggtcaatcaatggctactgttgctccta 21677602  T
Q  194 ttaatgc 200  Q
    | |||||    
T  21677601 tcaatgc 21677595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 61 - 200
Target Start/End: Original strand, 12586490 - 12586629
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  12586490 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 12586589  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    ||||||||||||||||| |||||||||| ||||| |||||    
T  12586590 gagccggtcaatccatgactactgttgctcctatcaatgc 12586629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 93 - 200
Target Start/End: Original strand, 31876002 - 31876109
Alignment:
Q  93 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 192  Q
    |||||| || ||||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||    
T  31876002 tgcatcgaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 31876101  T
Q  193 attaatgc 200  Q
    || |||||    
T  31876102 atcaatgc 31876109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 61 - 200
Target Start/End: Original strand, 34286043 - 34286182
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| || ||||| || || || |||||||||||||| |||||||||||||| || |  |    
T  34286043 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcaggtg 34286142  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    ||||||||||||||||||| |||||||| ||||| |||||    
T  34286143 gagccggtcaatccatggccactgttgctcctatcaatgc 34286182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 61 - 200
Target Start/End: Original strand, 34291103 - 34291242
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| || ||||| || || || |||||||||||||| |||||||||||||| || |  |    
T  34291103 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcaggtg 34291202  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    ||||||||||||||||||| |||||||| ||||| |||||    
T  34291203 gagccggtcaatccatggccactgttgctcctatcaatgc 34291242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 93 - 200
Target Start/End: Original strand, 34861401 - 34861508
Alignment:
Q  93 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 192  Q
    |||||| || ||||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||    
T  34861401 tgcatcgaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 34861500  T
Q  193 attaatgc 200  Q
    || |||||    
T  34861501 atcaatgc 34861508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 93 - 200
Target Start/End: Complemental strand, 37686429 - 37686322
Alignment:
Q  93 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 192  Q
    |||||| || ||||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||    
T  37686429 tgcatcgaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 37686330  T
Q  193 attaatgc 200  Q
    || |||||    
T  37686329 atcaatgc 37686322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 93 - 200
Target Start/End: Complemental strand, 37701694 - 37701587
Alignment:
Q  93 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 192  Q
    |||||| || ||||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||    
T  37701694 tgcatcgaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 37701595  T
Q  193 attaatgc 200  Q
    || |||||    
T  37701594 atcaatgc 37701587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 61 - 200
Target Start/End: Original strand, 37925182 - 37925321
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  37925182 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 37925281  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  37925282 gagccggtcaatcaatggctactgttgctcctatcaatgc 37925321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 93 - 200
Target Start/End: Original strand, 39889783 - 39889890
Alignment:
Q  93 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 192  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||||||||| |||||||| |||    
T  39889783 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggccactgttgctcct 39889882  T
Q  193 attaatgc 200  Q
    || |||||    
T  39889883 atcaatgc 39889890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 61 - 200
Target Start/End: Complemental strand, 9350546 - 9350407
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  9350546 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 9350447  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    ||||||||||||| ||| |||||||||| ||||| |||||    
T  9350446 gagccggtcaatcaatgactactgttgctcctatcaatgc 9350407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 16829858 - 16829763
Alignment:
Q  93 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgc 188  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| |||||    
T  16829858 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtgtcagctggagccggtcaatccatggctaccgttgc 16829763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 16891623 - 16891718
Alignment:
Q  93 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgc 188  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| |||||    
T  16891623 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtgtcagctggagccggtcaatccatggctaccgttgc 16891718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 61 - 200
Target Start/End: Original strand, 27776896 - 27777035
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  27776896 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 27776995  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    ||||||||||||| ||| |||||||||| ||||| |||||    
T  27776996 gagccggtcaatcaatgactactgttgctcctatcaatgc 27777035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 61 - 200
Target Start/End: Original strand, 27803381 - 27803520
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  27803381 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 27803480  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    ||||||||||||| ||| |||||||||| ||||| |||||    
T  27803481 gagccggtcaatcaatgactactgttgctcctatcaatgc 27803520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 61 - 200
Target Start/End: Original strand, 27816663 - 27816802
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  27816663 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 27816762  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    ||||||||||||| ||| |||||||||| ||||| |||||    
T  27816763 gagccggtcaatcaatgactactgttgctcctatcaatgc 27816802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 61 - 200
Target Start/End: Original strand, 40233188 - 40233327
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  40233188 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 40233287  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    ||||||||||||| |||||||| ||||| ||||| |||||    
T  40233288 gagccggtcaatcaatggctaccgttgctcctatcaatgc 40233327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 200
Target Start/End: Complemental strand, 11635792 - 11635602
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| || || | ||| |  |||||||| |    
T  11635792 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctgcgagtgcgttgaagaggtatg 11635693  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||| | ||||| |||||||| || || ||||||||||||||||||||||| ||||| ||||| |||||    
T  11635692 gtaatggacaccacaagaagaaagaagcggaagtggggatggtgtcagcaggagccggtcaatccatggctaccgttgctcctatcaatgc 11635602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 200
Target Start/End: Complemental strand, 11641981 - 11641791
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| || || | ||| |  |||||||| |    
T  11641981 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctgcgagtgcgttgaagaggtatg 11641882  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||| | ||||| |||||||| || || ||||||||||||||||||||||| ||||| ||||| |||||    
T  11641881 gtaatggacaccacaagaagaaagaagcggaagtggggatggtgtcagcaggagccggtcaatccatggctaccgttgctcctatcaatgc 11641791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 70 - 200
Target Start/End: Complemental strand, 19417042 - 19416912
Alignment:
Q  70 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 169  Q
    ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||| |    
T  19417042 gagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccgggc 19416943  T
Q  170 aatccatggctactgttgcccctattaatgc 200  Q
    |||| |||||||||||||| ||||| |||||    
T  19416942 aatcaatggctactgttgctcctatcaatgc 19416912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 94 - 200
Target Start/End: Complemental strand, 22926547 - 22926441
Alignment:
Q  94 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgccccta 193  Q
    ||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| || || ||||    
T  22926547 gcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgggagccggtcaatccatggctaccgtcgctccta 22926448  T
Q  194 ttaatgc 200  Q
    | |||||    
T  22926447 tcaatgc 22926441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 188
Target Start/End: Original strand, 32049526 - 32049614
Alignment:
Q  100 aagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgc 188  Q
    |||||||| ||||| || || || ||||| |||||||| ||||| |||||||| || || |||||||||||||| ||||||||||||||    
T  32049526 aagaggtatggtaatggacaccacaagaaaaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgc 32049614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 173
Target Start/End: Complemental strand, 39052380 - 39052268
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| || ||||| || || |    
T  39052380 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctg 39052281  T
Q  161 gagccggtcaatc 173  Q
    |||||||||||||    
T  39052280 gagccggtcaatc 39052268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 192; Significance: 1e-104; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 9 - 232
Target Start/End: Original strand, 20053 - 20276
Alignment:
Q  9 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 108  Q
    |||||||| || |||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  20053 tgagatggtcaccatggggactcgcctagaagaagctgtcagagaaggcattattgtgttcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 20152  T
Q  109 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20153 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 20252  T
Q  209 tatttccgtcgtacccgtatgcgc 232  Q
    ||  |||||||||||| |||||||    
T  20253 tacctccgtcgtacccatatgcgc 20276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 206
Target Start/End: Original strand, 30095 - 30291
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| |||||||| ||||||||  |||| || || || ||||| ||||||||||  |||||||| |  |||||||| | |||||| |    
T  30095 gagatggtcaccatgggaactcgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagccgaatcctctgtgaatgcatcgaggaggtatg 30194  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    |||| || || || |||||||||||||| ||| |||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  30195 gtaatggacaccacaagaagaaagaaacggaaatagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 30291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 192; Significance: 1e-104; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 9 - 236
Target Start/End: Original strand, 15227529 - 15227756
Alignment:
Q  9 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 108  Q
    |||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |     
T  15227529 tgagatggtcaccatggggactcgtctagaagaagctgtcagagaaggcattattgtattcgagaaagatgaatcctccgcaaatgcatcaaagaggcat 15227628  T
Q  109 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15227629 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagctggtcaatccatggctactgttgcccctattaatgctgcccagt 15227728  T
Q  209 tatttccgtcgtacccgtatgcgcaata 236  Q
    ||  ||||||||||||||||||||||||    
T  15227729 tacctccgtcgtacccgtatgcgcaata 15227756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 15285538 - 15285313
Alignment:
Q  11 agatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacgg 110  Q
    |||||| || |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15285538 agatggtcaccatggggactcgcctagaagaagctgtcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggaacgg 15285439  T
Q  111 taacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagtta 210  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15285438 taacggtcatcataagaagaaagaaacagaagtatggatggtatctgccggagctggtcaatccatggctactgttgcccctattaatgctgcccagtta 15285339  T
Q  211 tttccgtcgtacccgtatgcgcaata 236  Q
      ||| | |||||| |||||||||||    
T  15285338 cctccattgtacccatatgcgcaata 15285313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 9 - 232
Target Start/End: Original strand, 1899916 - 1900139
Alignment:
Q  9 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 108  Q
    |||||||| || ||||||||||||| | ||||||||| |||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||    
T  1899916 tgagatggtcaccatggggactcgtttggaagaagctgtcagagaaggcattattgtatttgagaaagttgaatcctctgtaaatgcatcaaagaggtac 1900015  T
Q  109 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 208  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1900016 ggtaacgatcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 1900115  T
Q  209 tatttccgtcgtacccgtatgcgc 232  Q
    ||  |||||||||||| |||||||    
T  1900116 tacctccgtcgtacccatatgcgc 1900139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 9 - 210
Target Start/End: Complemental strand, 14236140 - 14235939
Alignment:
Q  9 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 108  Q
    |||||||| || |||||| || ||  ||||||| ||| ||||||||| ||||||||| ||||||||||  |||||||| ||||   ||||||||| ||||    
T  14236140 tgagatggtcaccatgggaacccgcttagaagaggctgtcagagaagacattattgtgttcgagaaaggggaatcctctgcaagcacatcaaagaagtac 14236041  T
Q  109 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 208  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||| |||||| |||||||||||||||| ||||    
T  14236040 ggtaatggtcatcataagaagaaagagacagaagtagggatggtatctgccggaaccagtcaatccatggccactgttacccctattaatgctgctcagt 14235941  T
Q  209 ta 210  Q
    ||    
T  14235940 ta 14235939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 10 - 206
Target Start/End: Original strand, 14664675 - 14664871
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| |||||||| || |||||  | || ||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  14664675 gagatggtcaccatgggaactcgtctggaggaagccgttagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 14664774  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    |||| || || || |||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||| |||||||||||    
T  14664775 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtctgccggagctggtcaatccatggctactgttgctcctatcaatgctgccca 14664871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 15391948 - 15391771
Alignment:
Q  9 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 108  Q
    |||||||| || |||||| || ||  ||||||| ||| ||||||| ||||||||||| || | ||||| ||||||||| ||||||||||||| || |||     
T  15391948 tgagatggtcaccatgggaacccgcttagaagaggctgtcagagatggcattattgtgtttgggaaaggtgaatcctctgcaaatgcatcaaggaagtat 15391849  T
Q  109 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgtt 186  Q
    || || |||||||||||||||||||| ||||||||||||||||||||||| ||| || ||||||||||||||||||||    
T  15391848 ggcaatggtcatcataagaagaaagagacagaagtagggatggtatctgctggaaccagtcaatccatggctactgtt 15391771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 206
Target Start/End: Original strand, 17013657 - 17013853
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| ||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  17013657 gagatggtcaccatgggaacccgtctggaggaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 17013756  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    |||| || || || |||||||||||||| |||||||||||||| || |||||||| ||||||||||||||||||||||| ||||| ||||| |||||    
T  17013757 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagccggagctggtcaatccatggctactgttgctcctatcaatgcagccca 17013853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 200
Target Start/End: Complemental strand, 24592925 - 24592735
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| ||||||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  24592925 gagatggtcaccatgggaacccgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 24592826  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| ||| |||||||||| || || ||||||||||||||||||||||||||||| ||||| |||||    
T  24592825 gtaatggacaccacaagaagaaagaaacggaaatagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgc 24592735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 200
Target Start/End: Complemental strand, 14763918 - 14763728
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  14763918 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 14763819  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||| |||||||| ||||| |||||    
T  14763818 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggccactgttgctcctatcaatgc 14763728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 200
Target Start/End: Complemental strand, 36345126 - 36344936
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  36345126 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 36345027  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||| |||||||| ||||| |||||    
T  36345026 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggccactgttgctcctatcaatgc 36344936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 200
Target Start/End: Original strand, 6569510 - 6569700
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| || |||||||| ||||| || |    
T  6569510 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgcgaatgcatcgaagagatatg 6569609  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||| |||||||| ||||| |||||    
T  6569610 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggccactgttgctcctatcaatgc 6569700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 200
Target Start/End: Original strand, 14098198 - 14098388
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| | |||||| || ||||| || |    
T  14098198 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtaaatgcgtcgaagagatatg 14098297  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| ||||| |||||    
T  14098298 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcctatcaatgc 14098388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 200
Target Start/End: Original strand, 19372918 - 19373108
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| |  |||||||| |||||||| |    
T  19372918 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 19373017  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||| ||||| ||||| |||||    
T  19373018 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatctatggctaccgttgctcctatcaatgc 19373108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 93 - 200
Target Start/End: Complemental strand, 31127049 - 31126942
Alignment:
Q  93 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 192  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||||| |||    
T  31127049 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctggagccggtcaatcaatggctactgttgctcct 31126950  T
Q  193 attaatgc 200  Q
    || |||||    
T  31126949 atcaatgc 31126942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 188
Target Start/End: Complemental strand, 27163931 - 27163753
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| ||  | | |||||| || |||||||    
T  27163931 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaaaaggtacg 27163832  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgc 188  Q
    |||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| ||||||||||||||    
T  27163831 gtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctggagccggtcaatcaatggctactgttgc 27163753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 93 - 200
Target Start/End: Original strand, 30753482 - 30753589
Alignment:
Q  93 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 192  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||| | || || ||||||||||||||||||||||||||||| |||    
T  30753482 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatgatgtcagctggagccggtcaatccatggctactgttgcacct 30753581  T
Q  193 attaatgc 200  Q
    || |||||    
T  30753582 atcaatgc 30753589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 61 - 200
Target Start/End: Original strand, 54833098 - 54833237
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| |||||| || || | ||| || |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  54833098 attgtgtttgagaaagctgaatcttctgcgagtgcgtcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgg 54833197  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    ||||||||||||||||||| |||||||| ||||| |||||    
T  54833198 gagccggtcaatccatggccactgttgctcctatcaatgc 54833237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 70 - 200
Target Start/End: Complemental strand, 18801176 - 18801046
Alignment:
Q  70 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 169  Q
    ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||||||||| |||||||| || || ||||||||||    
T  18801176 gagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacagaagtggggatggtgtcagctggagccggtc 18801077  T
Q  170 aatccatggctactgttgcccctattaatgc 200  Q
    || | |||||||||||||| ||||| |||||    
T  18801076 aagctatggctactgttgcacctatcaatgc 18801046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 70 - 200
Target Start/End: Complemental strand, 33674364 - 33674234
Alignment:
Q  70 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 169  Q
    ||||||| ||||||||| | |||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||    
T  33674364 gagaaagctgaatcctctgtaaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtc 33674265  T
Q  170 aatccatggctactgttgcccctattaatgc 200  Q
    |||| |||||||| ||||| ||||| |||||    
T  33674264 aatcaatggctaccgttgctcctatcaatgc 33674234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 200
Target Start/End: Complemental strand, 40106240 - 40106062
Alignment:
Q  22 atggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatc 121  Q
    |||||||| ||||| || |||||  |||| || || || ||||| || ||||||| |||||| ||  | | |||||| || |||||||||||  | || |    
T  40106240 atggggacccgtcttgaggaagcagtcagggatggaatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaaaaggtacggtaatagacacc 40106141  T
Q  122 ataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    | |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| ||||| |||||    
T  40106140 acaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcctatcaatgc 40106062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 188
Target Start/End: Original strand, 5005527 - 5005705
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| || || | | | || |||||||| |    
T  5005527 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctgcgagtacgtcgaagaggtatg 5005626  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgc 188  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| |||||    
T  5005627 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgggagccggtcaatccatggctaccgttgc 5005705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 21969441 - 21969536
Alignment:
Q  93 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgc 188  Q
    |||||| |||||||| ||||| || || || ||||| |||||||| ||||| |||||||| || || |||||||||||||| ||||||||||||||    
T  21969441 tgcatcgaagaggtatggtaatggacaccacaagaaaaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgc 21969536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 200
Target Start/End: Original strand, 39850331 - 39850470
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| |  ||| | || ||||| || ||||| || || || |||||||||||||| ||||| || ||||| || || |    
T  39850331 attgtgtttgagaaagctgaatcctctgtgaatacgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctg 39850430  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  39850431 gagccggtcaatcaatggctactgttgcacctatcaatgc 39850470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 184; Significance: 1e-99; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 21 - 232
Target Start/End: Original strand, 16040980 - 16041191
Alignment:
Q  21 catggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcat 120  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  16040980 catgggaactcgtctagaagaagctgtcagagaaggcattattgtattcgagaaagttgaatcctccgtaaatgcatcaaagaggtatggtaacggtcat 16041079  T
Q  121 cataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagttatttccgtcgt 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  16041080 cataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagttacctccgtcgt 16041179  T
Q  221 acccgtatgcgc 232  Q
    |||| |||||||    
T  16041180 acccatatgcgc 16041191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 9 - 233
Target Start/End: Complemental strand, 16450496 - 16450272
Alignment:
Q  9 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 108  Q
    |||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||| || |||    
T  16450496 tgagatggtcaccatggggactcgtctagaagaagctgtcagagaaggcattattgtattcgagaaagttgaatcctctgtaaatgcatcaaaaagatac 16450397  T
Q  109 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 208  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16450396 ggtaacggtcatcataagaagaaagaaacaaaagtagggatggtatctgccggagccggtcaatccatagctactgttgcccctattaatgctgcccagt 16450297  T
Q  209 tatttccgtcgtacccgtatgcgca 233  Q
    ||  ||||||||||||||| |||||    
T  16450296 tacctccgtcgtacccgtacgcgca 16450272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 10 - 206
Target Start/End: Complemental strand, 16518916 - 16518720
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| |||||||| ||||||||  |||||||||| || ||||| ||||| |||| ||||||||| | |||||||||||||||||| |    
T  16518916 gagatggtcaccatgggaactcgtctggaagaagccgtcagagaaggaatcattgtgttcgaaaaagctgaatcctctgtaaatgcatcaaagaggtatg 16518817  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    ||||||| || || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16518816 gtaacggacaccacaagaagaaagaaacggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctattaatgctgccca 16518720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 10 - 206
Target Start/End: Complemental strand, 16503880 - 16503684
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| |||||||| ||||||||  |||||||||| || ||||| ||||| |||| ||||||||| |  ||||||||||||||||| |    
T  16503880 gagatggtcaccatgggaactcgtctggaagaagccgtcagagaaggaatcattgtgttcgaaaaagctgaatcctctgtgaatgcatcaaagaggtatg 16503781  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    ||||||| || || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16503780 gtaacggacaccacaagaagaaagaaacggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctattaatgctgccca 16503684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 206
Target Start/End: Original strand, 2154216 - 2154412
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| |||||||| ||||||||  |||| || |  || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  2154216 gagatggtcaccatgggaactcgtctggaagaagccgtcagggatgaaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 2154315  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  2154316 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 2154412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 10 - 206
Target Start/End: Complemental strand, 10917365 - 10917169
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| |||||||| ||||||||  | || || |  || ||||| || ||||||| ||||||||| |  ||||||||||||||||| |    
T  10917365 gagatggtcaccatgggaactcgtctggaagaagccgttagggatgaaatcattgtgtttgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 10917266  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  10917265 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 10917169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 10 - 199
Target Start/End: Complemental strand, 11425276 - 11425087
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  11425276 gagatggtcaccatgggaacccgtctggaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 11425177  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatg 199  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||    
T  11425176 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatg 11425087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 200
Target Start/End: Original strand, 5127635 - 5127825
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||| ||||| |  |||||||| |||||||| |    
T  5127635 gagatggtcaccatgggaacccgtctggaggaagccgtcagggatggaatcattgtgttcgagaaagctgagtcctctgtgaatgcatcgaagaggtatg 5127734  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| |||||    
T  5127735 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgc 5127825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 200
Target Start/End: Original strand, 31124554 - 31124744
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| || |||||||| ||||| || |    
T  31124554 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgcgaatgcatcgaagagatatg 31124653  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| |||||||||||||| || || |||||||||||||| |||||||| ||||| ||||| |||||    
T  31124654 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatcaatggctaccgttgctcctatcaatgc 31124744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 58 - 200
Target Start/End: Original strand, 45387034 - 45387176
Alignment:
Q  58 attattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctg 157  Q
    |||||||| || ||||||| |||||| || |||| ||| || |||||||| ||||| || || || |||||||||||||| ||||| ||||||||||| |    
T  45387034 attattgtgtttgagaaagctgaatcttctgcaagtgcgtcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcag 45387133  T
Q  158 ccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    | |||||||||||||| |||||||||||||| ||||| |||||    
T  45387134 ctggagccggtcaatcaatggctactgttgctcctatcaatgc 45387176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 200
Target Start/End: Complemental strand, 5147840 - 5147650
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| || || |||||||| |||||||| |    
T  5147840 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatgggatcattgtgtttgagaaagctgaatcttctgcgaatgcatcgaagaggtatg 5147741  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||||||||||||  |||| ||||| |||||    
T  5147740 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctaccattgctcctatcaatgc 5147650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 200
Target Start/End: Complemental strand, 24593041 - 24592851
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| | |||||| || ||||| || |    
T  24593041 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtaaatgcgtcgaagagatatg 24592942  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| ||||| |||||    
T  24592941 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcctatcaatgc 24592851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 61 - 200
Target Start/End: Original strand, 9618345 - 9618484
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| || ||||| || || || |||||||||||||| ||||| ||||||||||| || |    
T  9618345 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctg 9618444  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  9618445 gagccggtcaatcaatggctactgttgctcctatcaatgc 9618484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 93 - 200
Target Start/End: Complemental strand, 26275511 - 26275404
Alignment:
Q  93 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 192  Q
    |||||| |||||||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||    
T  26275511 tgcatcgaagaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 26275412  T
Q  193 attaatgc 200  Q
    || |||||    
T  26275411 atcaatgc 26275404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 94 - 200
Target Start/End: Complemental strand, 4145539 - 4145433
Alignment:
Q  94 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgccccta 193  Q
    ||||| |||||||| ||||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||||| ||||    
T  4145539 gcatcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctggagccggtcaatcaatggctactgttgctccta 4145440  T
Q  194 ttaatgc 200  Q
    | |||||    
T  4145439 tcaatgc 4145433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 200
Target Start/End: Complemental strand, 16736960 - 16736770
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| || || | ||| || ||||| || |    
T  16736960 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctgcgagtgcgtcgaagagatatg 16736861  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| ||||| ||||||||||| || ||||||||||||||||||||||| ||||| ||||| |||||    
T  16736860 gtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctggagccggtcaatccatggctaccgttgctcctatcaatgc 16736770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 200
Target Start/End: Complemental strand, 16752014 - 16751824
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| || || | ||| || ||||| || |    
T  16752014 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctgcgagtgcgtcgaagagatatg 16751915  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| ||||| ||||||||||| || ||||||||||||||||||||||| ||||| ||||| |||||    
T  16751914 gtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctggagccggtcaatccatggctaccgttgctcctatcaatgc 16751824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 200
Target Start/End: Original strand, 17523175 - 17523365
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| || || | ||| || ||||| || |    
T  17523175 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctgcgagtgcgtcgaagagatatg 17523274  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| ||||| ||||||||||| || ||||||||||||||||||||||| ||||| ||||| |||||    
T  17523275 gtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctggagccggtcaatccatggctaccgttgctcctatcaatgc 17523365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 200
Target Start/End: Complemental strand, 17530040 - 17529850
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| || || | ||| || ||||| || |    
T  17530040 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctgcgagtgcgtcgaagagatatg 17529941  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| ||||| ||||||||||| || ||||||||||||||||||||||| ||||| ||||| |||||    
T  17529940 gtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctggagccggtcaatccatggctaccgttgctcctatcaatgc 17529850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 200
Target Start/End: Complemental strand, 26320284 - 26320179
Alignment:
Q  95 catcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctat 194  Q
    |||| |||||||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||||    
T  26320284 catcgaagaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcctat 26320185  T
Q  195 taatgc 200  Q
     |||||    
T  26320184 caatgc 26320179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 93 - 200
Target Start/End: Original strand, 3445020 - 3445127
Alignment:
Q  93 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 192  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||    
T  3445020 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 3445119  T
Q  193 attaatgc 200  Q
    || |||||    
T  3445120 atcaatgc 3445127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 70 - 200
Target Start/End: Original strand, 11441263 - 11441393
Alignment:
Q  70 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 169  Q
    ||||||| ||||||||| | |||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||    
T  11441263 gagaaagctgaatcctctgtaaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtc 11441362  T
Q  170 aatccatggctactgttgcccctattaatgc 200  Q
    |||| |||||||| ||||| ||||| |||||    
T  11441363 aatcaatggctaccgttgctcctatcaatgc 11441393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 93 - 200
Target Start/End: Complemental strand, 26486161 - 26486054
Alignment:
Q  93 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 192  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| || ||||| ||||| |||    
T  26486161 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatagctaccgttgctcct 26486062  T
Q  193 attaatgc 200  Q
    || |||||    
T  26486061 atcaatgc 26486054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 200
Target Start/End: Complemental strand, 26670363 - 26670224
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  26670363 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 26670264  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    ||||||||||||| || ||||| ||||| ||||| |||||    
T  26670263 gagccggtcaatcaatagctaccgttgctcctatcaatgc 26670224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 93 - 200
Target Start/End: Complemental strand, 31564816 - 31564709
Alignment:
Q  93 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 192  Q
    |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||| ||||| |||    
T  31564816 tgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatctatggctaccgttgctcct 31564717  T
Q  193 attaatgc 200  Q
    || |||||    
T  31564716 atcaatgc 31564709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 194
Target Start/End: Original strand, 26434900 - 26435084
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| ||  | | |||| | ||||| || |    
T  26434900 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctacgagtgcaccgaagagatatg 26434999  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctat 194  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||| |||||||| |||||||| |||||    
T  26435000 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcaggagccggtcagtccatggccactgttgctcctat 26435084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 61 - 200
Target Start/End: Complemental strand, 26538322 - 26538183
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| || ||||| || || |    
T  26538322 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctg 26538223  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    ||||||||||||| || ||||| ||||| ||||| |||||    
T  26538222 gagccggtcaatcaatagctaccgttgctcctatcaatgc 26538183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 184; Significance: 1e-99; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 9 - 236
Target Start/End: Original strand, 20460748 - 20460975
Alignment:
Q  9 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 108  Q
    |||||||| || |||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  20460748 tgagatggtcaccatggggactcgcctagaagaagctgtcagagaaggcattattatattcgagaaagttgaatcctccgccaatgcatcaaagaggtac 20460847  T
Q  109 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 208  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20460848 ggtaacggtcatcataagaagaaagaaatagaagtagggatggtatctgccggagccggtcaatccatggctactattgcccctattaatgctgcccagt 20460947  T
Q  209 tatttccgtcgtacccgtatgcgcaata 236  Q
    ||  |||| |||||||||||||||||||    
T  20460948 tacctccgccgtacccgtatgcgcaata 20460975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 9 - 210
Target Start/End: Complemental strand, 16208640 - 16208439
Alignment:
Q  9 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 108  Q
    |||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||| |||    
T  16208640 tgagatggtcaccatggggactcgtctagaagaagctgtcagagaaggcattattgtatttgagaaagttgaatcctctgtaaatgcatcaaagagttac 16208541  T
Q  109 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 208  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16208540 ggtaacggtcatcataagaagaaagaaacagaagtagagatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 16208441  T
Q  209 ta 210  Q
    ||    
T  16208440 ta 16208439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 206
Target Start/End: Complemental strand, 41793922 - 41793726
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||| |||| |  | ||||||||||||||| |    
T  41793922 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatgggatcattgtgtttgagaaagctgaaacctctgtgagtgcatcaaagaggtatg 41793823  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    |||| || || || |||||||||||||| ||||| || |||||||| || ||||||||||||||||||||||| ||||| ||||| ||||| |||||    
T  41793822 gtaatggacaccacaagaagaaagaaacggaagtgggaatggtatcagctggagccggtcaatccatggctaccgttgctcctatcaatgcagccca 41793726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 200
Target Start/End: Original strand, 10962362 - 10962501
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| |  |||||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  10962362 attgtgtttgagaaagctgaatcctctgtgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 10962461  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  10962462 gagccggtcaatcaatggctactgttgctcctatcaatgc 10962501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 61 - 200
Target Start/End: Original strand, 51637910 - 51638049
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| |||||| || |||| ||| || |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  51637910 attgtgtttgagaaagctgaatcttctgcaagtgcgtcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 51638009  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  51638010 gagccggtcaatcaatggctactgttgctcctatcaatgc 51638049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 70 - 200
Target Start/End: Original strand, 28584682 - 28584812
Alignment:
Q  70 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 169  Q
    ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||| |    
T  28584682 gagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccgggc 28584781  T
Q  170 aatccatggctactgttgcccctattaatgc 200  Q
    |||| |||||||||||||| ||||| |||||    
T  28584782 aatcaatggctactgttgctcctatcaatgc 28584812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 157; Significance: 1e-83; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 8 - 232
Target Start/End: Original strand, 23891855 - 23892079
Alignment:
Q  8 atgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggta 107  Q
    ||||||||| || ||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||    
T  23891855 atgagatggtcaccatggggactcgtctggaagaagctgtcagagaaggaattattgtattcgagaaagttgaatcctccgtgaatgcatcaaagaggta 23891954  T
Q  108 cggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccag 207  Q
     |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||     
T  23891955 tggtaacggacatcataagaagaaagaaacagaagtagggatggtatctgccggagccgatcaatccatggctactgttgctcctattaatgctgcccaa 23892054  T
Q  208 ttatttccgtcgtacccgtatgcgc 232  Q
     |   |||||||||||| |||||||    
T  23892055 atgcctccgtcgtacccatatgcgc 23892079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 9 - 232
Target Start/End: Original strand, 25198682 - 25198905
Alignment:
Q  9 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 108  Q
    |||||||| || ||||||||||| ||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  25198682 tgagatggtcaccatggggactcatctggaagaagctgtcagagaaggaattattgtattcgagaaagttgaatcctccgtgaatgcatcaaagaggtac 25198781  T
Q  109 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 208  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||| |    
T  25198782 ggtaacggacatcataagaagaaggaaacagaagtagggatggtatccgccggagccggtcaatccatggctactgttgctcctattaatgcttcccaat 25198881  T
Q  209 tatttccgtcgtacccgtatgcgc 232  Q
    |   |||||||||||| |||||||    
T  25198882 tgcctccgtcgtacccatatgcgc 25198905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 24951761 - 24951955
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| |||||||| ||||||||  |||||||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  24951761 gagatggtcaccatgggaactcgtctggaagaagccgtcagagaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 24951860  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcc 204  Q
    ||||||| || || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  24951861 gtaacggacaccacaagaagaaagaaacggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctatcaatgctgcc 24951955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 10 - 206
Target Start/End: Complemental strand, 24688668 - 24688472
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| |||||||| ||||||||  |||||||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  24688668 gagatggtcaccatgggaactcgtctggaagaagccgtcagagaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 24688569  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    |||| || || || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  24688568 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctatcaatgcagccca 24688472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 10 - 206
Target Start/End: Original strand, 30934287 - 30934483
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| |||||||| ||||||||  |||| ||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  30934287 gagatggtcaccatgggaactcgtctggaagaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 30934386  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    |||| || || || |||||||||||||| |||||||||||||| ||| |||||||||| ||||||||| |||||||||| ||||| ||||| |||||    
T  30934387 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtctaccggagccggccaatccatgactactgttgctcctatcaatgcagccca 30934483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 206
Target Start/End: Complemental strand, 23752961 - 23752765
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| |||||||| ||||||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  23752961 gagatggtcaccatgggaactcgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 23752862  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  23752861 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 23752765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 10 - 206
Target Start/End: Complemental strand, 23718500 - 23718303
Alignment:
Q  10 gagatggacatcatggggactcgtctagaag-aagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 108  Q
    ||||||| || |||||| |||||||| |||| ||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| ||||||||     
T  23718500 gagatggtcaccatgggaactcgtctggaaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtat 23718401  T
Q  109 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    ||||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  23718400 ggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 23718303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 10 - 206
Target Start/End: Original strand, 11549005 - 11549201
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  11549005 gagatggtcaccatgggaacccgtctggaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 11549104  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  11549105 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 11549201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 206
Target Start/End: Complemental strand, 22999624 - 22999429
Alignment:
Q  11 agatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacgg 110  Q
    |||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| ||    
T  22999624 agatggtcaccatgggaacccgtctggaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatgg 22999525  T
Q  111 taacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    ||| || || || |||||||||||||| ||| |||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  22999524 taatggacaccacaagaagaaagaaacggaaatagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 22999429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 200
Target Start/End: Original strand, 33777138 - 33777328
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  33777138 gagatggtcaccatgggaacccgtctggaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 33777237  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||| ||||||||||||||||||||||| ||||| |||||    
T  33777238 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagctggtcaatccatggctactgttgctcctatcaatgc 33777328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 10 - 200
Target Start/End: Complemental strand, 15659271 - 15659081
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  15659271 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 15659172  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| ||||| |||||    
T  15659171 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcctatcaatgc 15659081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 200
Target Start/End: Complemental strand, 40474051 - 40473873
Alignment:
Q  22 atggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatc 121  Q
    ||||| || ||||| ||||||||  |||| || || || ||||| || ||||||| ||||||||| |  ||||| || ||||| |||||||| || || |    
T  40474051 atgggaacccgtcttgaagaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatacggtaatggacacc 40473952  T
Q  122 ataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    | |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||||||||| |||||    
T  40473951 acaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgcccctatcaatgc 40473873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 61 - 206
Target Start/End: Original strand, 2510753 - 2510898
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| |  | ||||||||||||||| ||||| || || || |||||||||||||| ||||| || |||||||| || |    
T  2510753 attgtgtttgagaaagctgaatcctctgtgagtgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtgggaatggtatcagctg 2510852  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    |||||||||||||||||||||| ||||| ||||| ||||| |||||    
T  2510853 gagccggtcaatccatggctaccgttgctcctatcaatgcagccca 2510898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 200
Target Start/End: Original strand, 9317153 - 9317292
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| |  | ||||||||||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  9317153 attgtgtttgagaaagctgaatcctctgtgagtgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 9317252  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  9317253 gagccggtcaatcaatggctactgttgctcctatcaatgc 9317292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 61 - 200
Target Start/End: Original strand, 6874004 - 6874143
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| |  | ||||||||||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  6874004 attgtgtttgagaaagctgaatcctctgtgagtgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 6874103  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    ||||||||||||| ||| |||||||||| ||||| |||||    
T  6874104 gagccggtcaatcaatgactactgttgctcctatcaatgc 6874143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 93 - 200
Target Start/End: Original strand, 12131889 - 12131996
Alignment:
Q  93 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 192  Q
    |||||| |||||||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||    
T  12131889 tgcatcgaagaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 12131988  T
Q  193 attaatgc 200  Q
    || |||||    
T  12131989 atcaatgc 12131996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 93 - 200
Target Start/End: Original strand, 24681171 - 24681278
Alignment:
Q  93 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 192  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||||||||| |||    
T  24681171 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctactgttgcacct 24681270  T
Q  193 attaatgc 200  Q
    || |||||    
T  24681271 atcaatgc 24681278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 93 - 200
Target Start/End: Original strand, 24723698 - 24723805
Alignment:
Q  93 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 192  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||||||||| |||    
T  24723698 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctactgttgcacct 24723797  T
Q  193 attaatgc 200  Q
    || |||||    
T  24723798 atcaatgc 24723805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 93 - 200
Target Start/End: Complemental strand, 37771427 - 37771320
Alignment:
Q  93 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 192  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||||| |||    
T  37771427 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctggagccggtcaatcaatggctactgttgcacct 37771328  T
Q  193 attaatgc 200  Q
    || |||||    
T  37771327 atcaatgc 37771320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 200
Target Start/End: Original strand, 5637561 - 5637751
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| |  | |||||| ||||| || |    
T  5637561 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatg 5637660  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| ||||| |||||    
T  5637661 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcctatcaatgc 5637751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 94 - 200
Target Start/End: Complemental strand, 8665902 - 8665796
Alignment:
Q  94 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgccccta 193  Q
    ||||| |||||||| ||||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||||| ||||    
T  8665902 gcatcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctggagccggtcaatcaatggctactgttgctccta 8665803  T
Q  194 ttaatgc 200  Q
    | |||||    
T  8665802 tcaatgc 8665796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 58 - 200
Target Start/End: Complemental strand, 15759320 - 15759178
Alignment:
Q  58 attattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctg 157  Q
    |||||||| || ||||||| |||||| || |||| ||| || |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || |    
T  15759320 attattgtgtttgagaaagctgaatcttctgcaagtgcgtcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtgtcag 15759221  T
Q  158 ccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    | ||||| |||||||| |||||||||||||| ||||| |||||    
T  15759220 ctggagcaggtcaatcaatggctactgttgctcctatcaatgc 15759178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 188
Target Start/End: Complemental strand, 18375923 - 18375745
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| ||  | | |||||| || |||||||    
T  18375923 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaaaaggtacg 18375824  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgc 188  Q
    |||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| ||||||||||||||    
T  18375823 gtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctggagccggtcaatcaatggctactgttgc 18375745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 188
Target Start/End: Original strand, 30151669 - 30151847
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| ||  | | |||||| || |||||||    
T  30151669 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaaaaggtacg 30151768  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgc 188  Q
    |||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| ||||||||||||||    
T  30151769 gtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctggagccggtcaatcaatggctactgttgc 30151847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 200
Target Start/End: Complemental strand, 37359154 - 37358976
Alignment:
Q  22 atggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatc 121  Q
    ||||| || ||||| || |||||  ||||||| || || |||||||| ||||||| |||||| ||  | | |||||| |||||||| ||||| || || |    
T  37359154 atgggaacccgtcttgaggaagcagtcagagatgggatcattgtatttgagaaagctgaatcttctacgagtgcatcgaagaggtatggtaatggacacc 37359055  T
Q  122 ataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    | |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||| ||||| ||||| |||||    
T  37359054 acaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatctatggctaccgttgctcctatcaatgc 37358976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 61 - 194
Target Start/End: Complemental strand, 9549003 - 9548870
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| |  | |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  9549003 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 9548904  T
Q  161 gagccggtcaatccatggctactgttgcccctat 194  Q
    ||||||||||||||||||| |||||||| |||||    
T  9548903 gagccggtcaatccatggccactgttgctcctat 9548870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 41674420 - 41674544
Alignment:
Q  70 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 169  Q
    |||||||  |||||||| |  ||||| || |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||    
T  41674420 gagaaagccgaatcctctgtgaatgcgtcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtc 41674519  T
Q  170 aatccatggctactgttgcccctat 194  Q
    ||||||||||||||||||| |||||    
T  41674520 aatccatggctactgttgctcctat 41674544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 61 - 200
Target Start/End: Complemental strand, 18501208 - 18501069
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  18501208 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 18501109  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  18501108 gagccggtcaatcaatggctactgttgctcctatcaatgc 18501069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 61 - 200
Target Start/End: Original strand, 26480094 - 26480233
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  26480094 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaactgaagtggggatggtgtcagctg 26480193  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  26480194 gagccggtcaatcaatggctactgttgctcctatcaatgc 26480233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 61 - 188
Target Start/End: Original strand, 30168171 - 30168298
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| || ||||| || || || |||||||||||||| ||||| ||||||||||| || |    
T  30168171 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctg 30168270  T
Q  161 gagccggtcaatccatggctactgttgc 188  Q
    ||||||||||||||||||||||| ||||    
T  30168271 gagccggtcaatccatggctactattgc 30168298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 61 - 200
Target Start/End: Original strand, 31431130 - 31431269
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| || ||||| || || || |||||||||||||| ||||| ||||||||||| || |    
T  31431130 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctg 31431229  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||||||||||||  ||||||||||||| ||||| |||||    
T  31431230 gagccggtcaatctgtggctactgttgctcctatcaatgc 31431269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 93 - 200
Target Start/End: Complemental strand, 31826847 - 31826740
Alignment:
Q  93 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 192  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||    
T  31826847 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 31826748  T
Q  193 attaatgc 200  Q
    || |||||    
T  31826747 atcaatgc 31826740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 93 - 200
Target Start/End: Complemental strand, 37671920 - 37671813
Alignment:
Q  93 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 192  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || ||||||||||||||||| |||||||| ||||| |||    
T  37671920 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagccggagccggtcaatctatggctaccgttgctcct 37671821  T
Q  193 attaatgc 200  Q
    || |||||    
T  37671820 atcaatgc 37671813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 61 - 200
Target Start/End: Original strand, 37754670 - 37754809
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| |||||| || |||| ||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  37754670 attgtgtttgagaaagctgaatcttctgcaagtgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 37754769  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  37754770 gagccggtcaatcaatggctactgttgcacctatcaatgc 37754809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 200
Target Start/End: Original strand, 3789177 - 3789367
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| |  | |||||| ||||| || |    
T  3789177 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatg 3789276  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||| ||||| ||||| |||||    
T  3789277 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctaccgttgctcctatcaatgc 3789367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 61 - 206
Target Start/End: Original strand, 34616223 - 34616368
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  34616223 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 34616322  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    ||||||||||| | |||||||||||||| ||||| ||||| |||||    
T  34616323 gagccggtcaagctatggctactgttgcacctatcaatgcagccca 34616368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 173 - 232
Target Start/End: Original strand, 22888287 - 22888346
Alignment:
Q  173 ccatggctactgttgcccctattaatgctgcccagttatttccgtcgtacccgtatgcgc 232  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||    
T  22888287 ccatggctactgttgcccctattaatgctgcccagttacctccgtcgtacccatatgcgc 22888346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 33516090 - 33516185
Alignment:
Q  93 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgc 188  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| |||||    
T  33516090 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtgtcagctggagccggtcaatccatggctaccgttgc 33516185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 200
Target Start/End: Original strand, 43077900 - 43078090
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| |  ||||| || ||||| || |    
T  43077900 gagatggtcaccatgggaacccgtctcgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatg 43077999  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| ||||| |||||||| ||  | |||||||||||| | |||||||||||||| ||||| |||||    
T  43078000 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcaactggagccggtcaagctatggctactgttgcacctatcaatgc 43078090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 206
Target Start/End: Complemental strand, 32599897 - 32599784
Alignment:
Q  93 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 192  Q
    |||||| |||||||| ||||| || || || |||||||| ||||| ||||| |||||||| || || |||||||||||||| ||| |||||||||| |||    
T  32599897 tgcatcgaagaggtatggtaatggacaccacaagaagaaggaaacggaagtggggatggtgtcagctggagccggtcaatcaatgactactgttgctcct 32599798  T
Q  193 attaatgctgccca 206  Q
    || ||||| |||||    
T  32599797 atcaatgcagccca 32599784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 200
Target Start/End: Complemental strand, 13325304 - 13325165
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  13325304 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 13325205  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| |||||||| |||||||| ||||| ||||| |||||    
T  13325204 gagctggtcaatcaatggctaccgttgctcctatcaatgc 13325165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 188
Target Start/End: Original strand, 28648937 - 28649055
Alignment:
Q  70 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 169  Q
    ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||    
T  28648937 gagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtc 28649036  T
Q  170 aatccatggctactgttgc 188  Q
    || | ||||||||||||||    
T  28649037 aagctatggctactgttgc 28649055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 28960226 - 28960120
Alignment:
Q  93 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 192  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||| ||||| | |||||||||||| |||    
T  28960226 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccgggcaatcaacggctactgttgcacct 28960127  T
Q  193 attaatg 199  Q
    || ||||    
T  28960126 atcaatg 28960120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 200
Target Start/End: Complemental strand, 29967517 - 29967387
Alignment:
Q  70 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 169  Q
    ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || || ||||||||||| ||||| |||||||| || || |||||||| |    
T  29967517 gagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaaaaagaaagaaacggaagtggggatggtgtcagctggagccgggc 29967418  T
Q  170 aatccatggctactgttgcccctattaatgc 200  Q
    |||| |||||||||||||| ||||| |||||    
T  29967417 aatcaatggctactgttgctcctatcaatgc 29967387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 200
Target Start/End: Original strand, 30029126 - 30029256
Alignment:
Q  70 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 169  Q
    ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || || ||||||||||| ||||| |||||||| || || |||||||| |    
T  30029126 gagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaaaaagaaagaaacggaagtggggatggtgtcagctggagccgggc 30029225  T
Q  170 aatccatggctactgttgcccctattaatgc 200  Q
    |||| |||||||||||||| ||||| |||||    
T  30029226 aatcaatggctactgttgctcctatcaatgc 30029256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 123; Significance: 3e-63; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 10 - 232
Target Start/End: Original strand, 16283091 - 16283313
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| |||||||| ||||||||  |||||||||| || |||||||||||||||| ||||||||| |  ||||||||||||||||| |    
T  16283091 gagatggtcaccatgggaactcgtctggaagaagccgtcagagaaggaatcattgtattcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 16283190  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagtt 209  Q
    ||||||| || || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||  |    
T  16283191 gtaacggacaccacaagaagaaagaaacggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctattaatgctgcccaaat 16283290  T
Q  210 atttccgtcgtacccgtatgcgc 232  Q
       |||||||||||| |||||||    
T  16283291 gcctccgtcgtacccatatgcgc 16283313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 10 - 206
Target Start/End: Original strand, 19687740 - 19687936
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| ||||||||  |||| ||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  19687740 gagatggtcaccatgggaacccgtctggaagaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 19687839  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    |||| || || || |||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  19687840 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagccggagccggtcaatccatggctactgttgctcctatcaatgctgccca 19687936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 9 - 203
Target Start/End: Complemental strand, 22081446 - 22081252
Alignment:
Q  9 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 108  Q
    |||||||| || |||||| || ||  ||||||| ||| ||||||| ||||||||||| || || |||  ||||||||| ||||||||||||| || |||     
T  22081446 tgagatggtcaccatgggaacccgcttagaagaggctgtcagagatggcattattgtgtttgaaaaatgtgaatcctctgcaaatgcatcaaggaagtat 22081347  T
Q  109 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgc 203  Q
    || || |||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||| || ||||||||    
T  22081346 ggcaatggtcatcataagaagaaagagacagaagtagggatggtatctgccggaaccagtcaatccatggctactgttgcccccatcaatgctgc 22081252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 10 - 206
Target Start/End: Original strand, 16277196 - 16277392
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| |||||||| ||||||||  |||| ||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  16277196 gagatggtcaccatgggaactcgtctggaagaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 16277295  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  16277296 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 16277392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 206
Target Start/End: Original strand, 14557269 - 14557465
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| |||||||| ||||||||  |||| || || || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  14557269 gagatggtcaccatgggaactcgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 14557368  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    |||| || || || |||||||||||||| |||||||||||||| || || |||||||||||||||||||||||||| || ||||| ||||| |||||    
T  14557369 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgtcgctcctatcaatgcagccca 14557465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 206
Target Start/End: Complemental strand, 2137832 - 2137636
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| ||| | || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  2137832 gagatggtcaccatgggaacccgtctggaggaagccgtcagggaatgaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 2137733  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  2137732 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 2137636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 10 - 206
Target Start/End: Complemental strand, 27609478 - 27609282
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| |||||||| || |||||  |||| || || || ||||| ||||||||||  |||||||| |  ||||||||||||||||| |    
T  27609478 gagatggtcaccatgggaactcgtctggaggaagccgtcagggatggaatcattgtgttcgagaaagccgaatcctctgtgaatgcatcaaagaggtatg 27609379  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    |||| || || || |||||||||||||| ||| |||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  27609378 gtaatggacaccacaagaagaaagaaacggaaatagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 27609282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 200
Target Start/End: Original strand, 18710228 - 18710418
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  18710228 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 18710327  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| ||||| || ||||| || || |||||||||||||| |||||||| ||||| ||||| |||||    
T  18710328 gtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctggagccggtcaatcaatggctaccgttgctcctatcaatgc 18710418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 200
Target Start/End: Original strand, 19674080 - 19674270
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || |||||||| |||||||||| |||||| || || | ||| || |||||||| |    
T  19674080 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaattattgtgttcgagaaagctgaatcttctgcgagtgcgtcgaagaggtatg 19674179  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || ||||| |||||||||||||| || || |||||||| || || |||||| |||||||||||||||| ||||| ||||| |||||    
T  19674180 gtaatggacatcacaagaagaaagaaacggacgtggggatggtgtcagctggagccagtcaatccatggctaccgttgctcctatcaatgc 19674270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 70 - 200
Target Start/End: Complemental strand, 31490263 - 31490133
Alignment:
Q  70 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 169  Q
    ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||    
T  31490263 gagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaactgaagtggggatggtgtcagctggagccggtc 31490164  T
Q  170 aatccatggctactgttgcccctattaatgc 200  Q
    |||| |||||||||||||||||||| |||||    
T  31490163 aatcaatggctactgttgcccctatcaatgc 31490133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 94 - 206
Target Start/End: Original strand, 31354250 - 31354362
Alignment:
Q  94 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgccccta 193  Q
    ||||| |||||||| ||||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||||||||| || ||||| ||||    
T  31354250 gcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctggagccggtcaatccatggccaccgttgctccta 31354349  T
Q  194 ttaatgctgccca 206  Q
    | ||||| |||||    
T  31354350 tcaatgcagccca 31354362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 93 - 200
Target Start/End: Complemental strand, 19208850 - 19208743
Alignment:
Q  93 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 192  Q
    |||||| |||| ||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||    
T  19208850 tgcatcgaagaagtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 19208751  T
Q  193 attaatgc 200  Q
    || |||||    
T  19208750 atcaatgc 19208743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 61 - 200
Target Start/End: Original strand, 19286158 - 19286297
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| |||||| || || | ||| || |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  19286158 attgtgtttgagaaagctgaatcttctgcgagtgcgtcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgg 19286257  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    ||||||||||||||||||| |||||||| ||||| |||||    
T  19286258 gagccggtcaatccatggccactgttgctcctatcaatgc 19286297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 61 - 188
Target Start/End: Complemental strand, 28362477 - 28362350
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| || ||||| || || || |||||||||||||| ||||| ||||||||||| || |    
T  28362477 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctg 28362378  T
Q  161 gagccggtcaatccatggctactgttgc 188  Q
    |||||||||||||||||||||| |||||    
T  28362377 gagccggtcaatccatggctaccgttgc 28362350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 200
Target Start/End: Complemental strand, 3330080 - 3329902
Alignment:
Q  22 atggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatc 121  Q
    ||||| |||||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || |    
T  3330080 atgggaactcgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacacc 3329981  T
Q  122 ataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    | |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||  ||||| ||||| |||||    
T  3329980 acaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctatcgttgctcctatcaatgc 3329902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 200
Target Start/End: Original strand, 29828967 - 29829145
Alignment:
Q  22 atggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatc 121  Q
    ||||| || ||||| || |||||  ||||||| || || ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || |    
T  29828967 atgggaacccgtcttgaggaagccgtcagagatggaatcattgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacacc 29829066  T
Q  122 ataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    | |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||| ||||| ||||| |||||    
T  29829067 acaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctaccgttgctcctatcaatgc 29829145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 61 - 200
Target Start/End: Complemental strand, 19518665 - 19518526
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  19518665 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 19518566  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    ||||||||||||| ||| |||||||||| ||||| |||||    
T  19518565 gagccggtcaatcaatgactactgttgctcctatcaatgc 19518526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 70 - 200
Target Start/End: Original strand, 33258425 - 33258555
Alignment:
Q  70 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 169  Q
    ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||| |    
T  33258425 gagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatgggcaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccgggc 33258524  T
Q  170 aatccatggctactgttgcccctattaatgc 200  Q
    |||| |||||||||||||| ||||| |||||    
T  33258525 aatcaatggctactgttgctcctatcaatgc 33258555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 200
Target Start/End: Complemental strand, 12093306 - 12093116
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  ||||||| || || ||||| || ||||||| |||||| ||  | | |||||| ||||| || |    
T  12093306 gagatggtcaccatgggaacccgtcttgaggaagcagtcagagatgggatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaagagatatg 12093207  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| ||||| || ||||| || || | |||||| ||||| ||||||||| |||| ||||| |||||    
T  12093206 gtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctgcagccggccaatctatggctactattgctcctatcaatgc 12093116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 111; Significance: 4e-56; HSPs: 3)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 10 - 232
Target Start/End: Original strand, 29405 - 29627
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| |||||||| ||||||||  |||| ||||| || ||||| ||||| |||| ||||||||| |  ||||||||||||||||| |    
T  29405 gagatggtcaccatgggaactcgtctggaagaagccgtcagggaaggaatcattgtgttcgaaaaagctgaatcctctgtgaatgcatcaaagaggtatg 29504  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagtt 209  Q
    ||||||| || || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||  |    
T  29505 gtaacggacaccacaagaagaaagaaacggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctattaatgctgcccaaat 29604  T
Q  210 atttccgtcgtacccgtatgcgc 232  Q
       ||| ||||||||||||||||    
T  29605 gcctccatcgtacccgtatgcgc 29627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 10 - 206
Target Start/End: Complemental strand, 40683 - 40487
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| |||||||| || |||||  |||| ||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  40683 gagatggtcaccatgggaactcgtctggaggaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 40584  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    ||||||| || || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  40583 gtaacggacaccacaagaagaaagaaacggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctatcaatgcagccca 40487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 10 - 206
Target Start/End: Complemental strand, 47599 - 47403
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| ||||||||  |||| || || || ||||| |||||||||| |||||||||||  ||||||||||||||||| |    
T  47599 gagatggtcaccatgggaacccgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctccgtgaatgcatcaaagaggtatg 47500  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    |||| || || || |||||||||||||| ||| |||||||||| || || |||||||||||| |||||||||||||||| | ||| ||||| |||||    
T  47499 gtaatggacaccacaagaagaaagaaacggaaatagggatggtgtcagctggagccggtcaacccatggctactgttgctcttatcaatgcagccca 47403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 9 - 201
Target Start/End: Original strand, 21208 - 21400
Alignment:
Q  9 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 108  Q
    |||||||| || |||||| || ||  ||||||| ||| ||||||| || |||||||| || ||||||| ||||||||| ||||||||||||| || |||     
T  21208 tgagatggtcaccatgggaacccgcttagaagaggctgtcagagacggaattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtat 21307  T
Q  109 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgct 201  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||| |||||||||||||||| || ||||||    
T  21308 ggtaatggtcatcataagaagaaagagacagaagtagggatggtatctgccggaaccagtcaatccgtggctactgttgcccccatcaatgct 21400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 10 - 206
Target Start/End: Original strand, 26934 - 27130
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| |||||||| ||||||||  |||| || || || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  26934 gagatggtcaccatgggaactcgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 27033  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  27034 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 27130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 5e-43; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 10 - 206
Target Start/End: Complemental strand, 13299508 - 13299312
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| |||||||| ||||||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||||||||| || |    
T  13299508 gagatggtcaccatgggaactcgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagagatatg 13299409  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    |||| || || || |||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||| |||||    
T  13299408 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtctgccggagctggtcaatccatggctactgttgctcctatcaatgcagccca 13299312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 10 - 206
Target Start/End: Complemental strand, 22935434 - 22935238
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| |||||||| ||||||||  |||| ||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  22935434 gagatggtcaccatgggaactcgtctggaagaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 22935335  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    ||||||| || || |||||||||||||| ||| |||||||||| || ||||| ||||||||||||||| |||||||||| ||||| ||||| |||||    
T  22935334 gtaacggacaccacaagaagaaagaaacggaaatagggatggtgtcagccggggccggtcaatccatgactactgttgctcctatcaatgcagccca 22935238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 10 - 206
Target Start/End: Complemental strand, 23857879 - 23857683
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| |||||||| ||||||||  |||| ||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  23857879 gagatggtcaccatgggaactcgtctggaagaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 23857780  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    ||||||| || || |||||||||||||| ||| |||||||||| || ||||| ||||||||||||||| |||||||||| ||||| ||||| |||||    
T  23857779 gtaacggacaccacaagaagaaagaaacggaaatagggatggtgtcagccggggccggtcaatccatgactactgttgctcctatcaatgcagccca 23857683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 10 - 206
Target Start/End: Original strand, 24863356 - 24863552
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||| | |||||||| || |||||  |||| ||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  24863356 gagatggtcaccatgagaactcgtctggaggaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 24863455  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    |||| || || || |||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  24863456 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagccggagccggtcaatccatggctactgttgctcctatcaatgcagccca 24863552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 9 - 201
Target Start/End: Original strand, 20160345 - 20160534
Alignment:
Q  9 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 108  Q
    |||||||| || |||||| || ||||||||||||||| |||| ||||| || ||||| || || |||| |||||||||||  |  ||| |||| ||||||    
T  20160345 tgagatggtcaccatgggaacccgtctagaagaagctgtcagggaaggaatcattgtgtttgataaaggtgaatcctccgtgagcgcaccaaaaaggtac 20160444  T
Q  109 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgct 201  Q
    ||||||||||||||||||||||| ||||||||||||||||||| || |||    |||||||||||||||||||||||||||||| ||||||||    
T  20160445 ggtaacggtcatcataagaagaaggaaacagaagtagggatggaatttgc---tgccggtcaatccatggctactgttgcccctgttaatgct 20160534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 9 - 201
Target Start/End: Complemental strand, 22172486 - 22172297
Alignment:
Q  9 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 108  Q
    |||||||| || |||||| || ||||||||||||||| |||| ||||| || ||||| || || |||| |||||||||||  |  ||| |||| ||||||    
T  22172486 tgagatggtcaccatgggaacccgtctagaagaagctgtcagggaaggaatcattgtgtttgataaaggtgaatcctccgtgagcgcaccaaaaaggtac 22172387  T
Q  109 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgct 201  Q
    ||||||||||||||||||||||| ||||||||||||||||||| || |||    |||||||||||||||||||||||||||||| ||||||||    
T  22172386 ggtaacggtcatcataagaagaaggaaacagaagtagggatggaatttgc---tgccggtcaatccatggctactgttgcccctgttaatgct 22172297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 206
Target Start/End: Complemental strand, 15424874 - 15424678
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| |||||||| || |||||  |||| ||||| || ||||| |||||||||| |||||| || |  ||||||||||||||||| |    
T  15424874 gagatggtcaccatgggaactcgtctggaggaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcttctgtgaatgcatcaaagaggtatg 15424775  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  15424774 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 15424678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 206
Target Start/End: Original strand, 26988640 - 26988836
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| |||||||| ||||||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  26988640 gagatggtcaccatgggaactcgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 26988739  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  26988740 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 26988836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 206
Target Start/End: Original strand, 26999712 - 26999908
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| ||||| || ||||| |||||||||| ||||||||| |  ||||||||||||||||| |    
T  26999712 gagatggtcaccatgggaacccgtctggaggaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 26999811  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  26999812 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 26999908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 61 - 206
Target Start/End: Complemental strand, 24305124 - 24304979
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| |||||||||| ||||||||| |  ||||||||||||||||| ||||| || || || |||||||||||||| |||||||||||||| || || |    
T  24305124 attgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctg 24305025  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    ||||||||||||||||||||||||| || ||||| |||||||||||    
T  24305024 gagccggtcaatccatggctactgtcgctcctatcaatgctgccca 24304979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 61 - 200
Target Start/End: Original strand, 26918070 - 26918209
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| |||||||||| ||||||||| |  |||||||| |||||||| ||||| || || || |||||||||||||| |||||||||||||| || || |    
T  26918070 attgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctg 26918169  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||||||||||||||||||||||||||| ||||| |||||    
T  26918170 gagccggtcaatccatggctactgttgctcctatcaatgc 26918209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 10 - 194
Target Start/End: Original strand, 16749493 - 16749677
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| |||||||||| ||||||||| |  | |||||| |||||||| |    
T  16749493 gagatggtcaccatgggaacccgtctggaggaagccgtcagggatgggatcattgtgttcgagaaagctgaatcctctgtgagtgcatcgaagaggtatg 16749592  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctat 194  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| |||||    
T  16749593 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctat 16749677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 200
Target Start/End: Original strand, 29549117 - 29549307
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| |  | |||||| |||||||| |    
T  29549117 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgagtgcatcgaagaggtatg 29549216  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || ||||| |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||| ||||| ||||| |||||    
T  29549217 gtaatggacatcacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatctatggctaccgttgctcctatcaatgc 29549307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 10 - 206
Target Start/End: Original strand, 27044029 - 27044225
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| |  | |||||| ||||| || |    
T  27044029 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatg 27044128  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| ||||| ||||| ||||| |||||    
T  27044129 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctaccgttgctcctatcaatgcagccca 27044225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 200
Target Start/End: Original strand, 3695702 - 3695892
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| |  |||||||| ||||| || |    
T  3695702 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgaatgcatcgaagagatatg 3695801  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||| ||||| ||||| |||||    
T  3695802 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctaccgttgctcctatcaatgc 3695892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 10 - 206
Target Start/End: Original strand, 17024901 - 17025097
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || |||||||  |||||||| |  |||||||| |||||||| |    
T  17024901 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagccgaatcctctgtgaatgcatcgaagaggtatg 17025000  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgccca 206  Q
    |||| || || || |||||||||||||| ||||| || ||||| || || |||||||||||| | |||||||||||||| ||||| ||||| |||||    
T  17025001 gtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctggagccggtcaagctatggctactgttgctcctatcaatgcagccca 17025097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 93 - 200
Target Start/End: Original strand, 4525011 - 4525118
Alignment:
Q  93 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 192  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||    
T  4525011 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatctatggctactgttgcacct 4525110  T
Q  193 attaatgc 200  Q
    || |||||    
T  4525111 atcaatgc 4525118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 93 - 200
Target Start/End: Original strand, 4757483 - 4757590
Alignment:
Q  93 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 192  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || ||||||||||||||||| ||||||||||| || |||    
T  4757483 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagccggagccggtcaatcaatggctactgtcgctcct 4757582  T
Q  193 attaatgc 200  Q
    || |||||    
T  4757583 atcaatgc 4757590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 61 - 200
Target Start/End: Original strand, 4772687 - 4772826
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || ||||    
T  4772687 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagccg 4772786  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    ||||||||||||| |||||||| ||||| ||||| |||||    
T  4772787 gagccggtcaatctatggctaccgttgctcctatcaatgc 4772826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 61 - 200
Target Start/End: Original strand, 27007402 - 27007541
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  27007402 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 27007501  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    ||||||||||||| |||||||||||||| ||||| |||||    
T  27007502 gagccggtcaatcaatggctactgttgctcctatcaatgc 27007541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 61 - 200
Target Start/End: Original strand, 27484807 - 27484946
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| |  | |||||| ||||| |||||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  27484807 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 27484906  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    ||||||||||||| |||||||| ||||| ||||| |||||    
T  27484907 gagccggtcaatcaatggctaccgttgctcctatcaatgc 27484946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 93 - 200
Target Start/End: Original strand, 29572735 - 29572842
Alignment:
Q  93 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 192  Q
    |||||| || ||||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||    
T  29572735 tgcatcgaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 29572834  T
Q  193 attaatgc 200  Q
    || |||||    
T  29572835 atcaatgc 29572842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 61 - 200
Target Start/End: Original strand, 29501096 - 29501235
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||  |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  29501096 attgtgtttgagaaagctgaatcctttgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 29501195  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||||||||||||||||||||| ||||| ||||| |||||    
T  29501196 gagccggtcaatccatggctaccgttgctcctatcaatgc 29501235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 30558490 - 30558395
Alignment:
Q  93 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgc 188  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| |||||    
T  30558490 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtgtcagctggagccggtcaatccatggctaccgttgc 30558395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 61 - 200
Target Start/End: Complemental strand, 34463867 - 34463728
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  34463867 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 34463768  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    ||||||||||||| ||| |||||||||| ||||| |||||    
T  34463767 gagccggtcaatcaatgactactgttgctcctatcaatgc 34463728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 200
Target Start/End: Complemental strand, 4546341 - 4546151
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  ||||||| || || ||||| || ||||||| |||||| ||  | | |||||| |||||||| |    
T  4546341 gagatggtcaccatgggaacccgtcttgaggaagcagtcagagatgggatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatg 4546242  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| ||||| || ||||| || || | |||||||||||| |||||||| ||||| ||||| |||||    
T  4546241 gtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctgcagccggtcaatctatggctaccgttgctcctatcaatgc 4546151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 70 - 200
Target Start/End: Complemental strand, 16944524 - 16944394
Alignment:
Q  70 gagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 169  Q
    ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||| |    
T  16944524 gagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccgggc 16944425  T
Q  170 aatccatggctactgttgcccctattaatgc 200  Q
    |||| |||||||||||||| ||||| |||||    
T  16944424 aatcaatggctactgttgctcctatcaatgc 16944394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 22477673 - 22477607
Alignment:
Q  167 gtcaatccatggctactgttgcccctattaatgctgcccagttatttccgtcgtacccgtatgcgca 233  Q
    ||||||||||||||||||||||||| |||||||||||||| |||  || ||||||||||||||||||    
T  22477673 gtcaatccatggctactgttgccccaattaatgctgcccaattacctctgtcgtacccgtatgcgca 22477607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 200
Target Start/End: Original strand, 28207081 - 28207271
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  ||||||| || || ||||| || ||||||| |||||| ||  | | |||||| |||||||| |    
T  28207081 gagatggtcaccatgggaacccgtcttgaggaagcagtcagagatgggatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatg 28207180  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| ||||| || ||||| || || | |||||||||||| |||||||| ||||| ||||| |||||    
T  28207181 gtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctgcagccggtcaatctatggctaccgttgctcctatcaatgc 28207271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 94 - 194
Target Start/End: Complemental strand, 26778100 - 26778000
Alignment:
Q  94 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgccccta 193  Q
    ||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||| ||||| |||||||||||||| ||||    
T  26778100 gcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccgggcaatcaatggctactgttgcaccta 26778001  T
Q  194 t 194  Q
    |    
T  26778000 t 26778000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 93 - 200
Target Start/End: Complemental strand, 27360484 - 27360377
Alignment:
Q  93 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 192  Q
    |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||| ||||| |||    
T  27360484 tgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatctatggctaccgttgctcct 27360385  T
Q  193 attaatgc 200  Q
    || |||||    
T  27360384 atcaatgc 27360377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 93 - 200
Target Start/End: Complemental strand, 27450827 - 27450720
Alignment:
Q  93 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 192  Q
    |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||| ||||| |||    
T  27450827 tgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatctatggctaccgttgctcct 27450728  T
Q  193 attaatgc 200  Q
    || |||||    
T  27450727 atcaatgc 27450720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 61 - 200
Target Start/End: Original strand, 16673817 - 16673956
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| || ||||| || || |    
T  16673817 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctg 16673916  T
Q  161 gagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    ||||||||||||| || ||||| ||||| ||||| |||||    
T  16673917 gagccggtcaatcaatagctaccgttgctcctatcaatgc 16673956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 200
Target Start/End: Complemental strand, 4724688 - 4724510
Alignment:
Q  22 atggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatc 121  Q
    ||||| || ||||| || |||||  ||||||| || || ||||| || ||||||| |||||| ||  | | |||||| || ||||| ||||| || || |    
T  4724688 atgggaacccgtcttgaggaagcagtcagagatgggatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaaaaggtatggtaatggacacc 4724589  T
Q  122 ataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    | |||||||||||||| ||||| || ||||| || || | |||||||||||| |||||||| ||||| ||||| |||||    
T  4724588 acaagaagaaagaaacggaagtgggaatggtgtcagctgcagccggtcaatctatggctaccgttgctcctatcaatgc 4724510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 26116893 - 26116792
Alignment:
Q  93 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 192  Q
    |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| || ||||| ||||| |||    
T  26116893 tgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatctatagctaccgttgctcct 26116794  T
Q  193 at 194  Q
    ||    
T  26116793 at 26116792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 203
Target Start/End: Complemental strand, 27273128 - 27272947
Alignment:
Q  22 atggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatc 121  Q
    ||||||||||||||||| |||||  |||| ||||| || |||||||| ||||| | ||| || ||  ||||||  |  |||||||| || || || || |    
T  27273128 atggggactcgtctagaggaagccgtcagggaaggtatcattgtatttgagaagggtgagtcttctacaaatgggttgaagaggtatggcaatggccacc 27273029  T
Q  122 ataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgc 203  Q
    | |||||||| |||||||| || || ||||||||  | ||||| |||||  | |  |||||||| |||||| ||||||||||    
T  27273028 acaagaagaaggaaacagaggttggaatggtatcctctggagcaggtcagactacagctactgtcgcccctgttaatgctgc 27272947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 199
Target Start/End: Complemental strand, 27630254 - 27630077
Alignment:
Q  22 atggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatc 121  Q
    ||||||||||||||||| || ||  ||||||| || || |||||||| ||||| | ||| || ||  ||| ||  || |||||||| || || || || |    
T  27630254 atggggactcgtctagaggaggccgtcagagagggtatcattgtatttgagaagggtgagtcttctacaagtgggtcgaagaggtatggcaatggccacc 27630155  T
Q  122 ataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatg 199  Q
    | |||||||| |||||||| || || ||||||||  | ||||| ||||| || | ||||||||| |||||| ||||||    
T  27630154 acaagaagaaggaaacagaggttggaatggtatcctcgggagcaggtcagtctacggctactgtcgcccctgttaatg 27630077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 200
Target Start/End: Complemental strand, 744 - 554
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| ||||||||  |||| || || || ||||| |||||||||| ||||||||| |  |||||||| |||||||| |    
T  744 gagatggtcaccatgggaacccgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 645  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| |||||||||||||| ||  | ||||||||||||||||||||||||||||| ||||| |||||    
T  644 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcaactggagccggtcaatccatggctactgttgctcctatcaatgc 554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 200
Target Start/End: Original strand, 7874 - 8064
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| |  |||||||| |||||||| |    
T  7874 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 7973  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| ||||| ||||||||||| || ||||||||||||||  ||||||||||||| ||||| |||||    
T  7974 gtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctggagccggtcaatctgtggctactgttgctcctatcaatgc 8064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 204
Target Start/End: Complemental strand, 48769 - 48568
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatc-aaagaggtac 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||||||||| || ||||| |||||||||| ||||||||| |  |||||||| |||||||||     
T  48769 gagatggtcaccatgggaactcgtctggaagaagccgtcagagaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaaagaggtat 48670  T
Q  109 ggtaac-ggtcatcataagaagaaagaaacagaagta-gggatggtatc-tgccggagccgg--tcaatccatggcta-ctgttgcccctattaatgctg 202  Q
    |||||| || || || |||||||||||||| |||||| |||||||| || ||||||||||||   ||||||||||||| ||||||| ||||| |||||||    
T  48669 ggtaacgggacaccacaagaagaaagaaacggaagtaggggatggtgtcttgccggagccgggtccaatccatggctacctgttgctcctatcaatgctg 48570  T
Q  203 cc 204  Q
    ||    
T  48569 cc 48568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 200
Target Start/End: Complemental strand, 26816 - 26626
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| ||||||||| | |||||| || ||||| || |    
T  26816 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtaaatgcgtcgaagagatatg 26717  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| ||||| |||||    
T  26716 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcctatcaatgc 26626  T

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Target: scaffold0350 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 93 - 200
Target Start/End: Complemental strand, 7770 - 7663
Alignment:
Q  93 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccct 192  Q
    |||||| |||||||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||||||||||||| |||    
T  7770 tgcatcgaagaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 7671  T
Q  193 attaatgc 200  Q
    || |||||    
T  7670 atcaatgc 7663  T

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Target: scaffold0237 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 188
Target Start/End: Complemental strand, 15544 - 15366
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || ||||||| |||||| ||  | | |||||| || |||||||    
T  15544 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaaaaggtacg 15445  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgc 188  Q
    |||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| ||||||||||||||    
T  15444 gtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctggagccggtcaatcaatggctactgttgc 15366  T

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Target: scaffold0038 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 200
Target Start/End: Original strand, 7579 - 7769
Alignment:
Q  10 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacg 109  Q
    ||||||| || |||||| || ||||| || |||||  ||||||| || || ||||| || ||||||| |||||| ||  | | |||||| |||||||| |    
T  7579 gagatggtcaccatgggaacccgtcttgaggaagcagtcagagatgggatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatg 7678  T
Q  110 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||| || || || |||||||||||||| ||||| || ||||| || || | |||||||||||| |||||||| ||||| ||||| |||||    
T  7679 gtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctgcagccggtcaatctatggctaccgttgctcctatcaatgc 7769  T

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Target: scaffold0159 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 200
Target Start/End: Complemental strand, 9593 - 9490
Alignment:
Q  97 tcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctatta 196  Q
    |||||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||| || || ||||| |    
T  9593 tcaaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgggagccggtcaatccatggctaccgtcgctcctatca 9494  T
Q  197 atgc 200  Q
    ||||    
T  9493 atgc 9490  T

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Target: scaffold0415 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 200
Target Start/End: Original strand, 5682 - 5821
Alignment:
Q  61 attgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 160  Q
    ||||| || ||||||| ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  5682 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagt-gggatggtgtcagctg 5780  T
Q  161 gagccggtcaatc-catggctactgttgcccctattaatgc 200  Q
    |||||||||||||  |||||||||||||| ||||| |||||    
T  5781 gagccggtcaatcaaatggctactgttgctcctatcaatgc 5821  T

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Target: scaffold0496 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0496
Description:

Target: scaffold0496; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 200
Target Start/End: Complemental strand, 197 - 157
Alignment:
Q  160 ggagccggtcaatccatggctactgttgcccctattaatgc 200  Q
    |||||||||||||| |||||||||||||| ||||| |||||    
T  197 ggagccggtcaatcaatggctactgttgcacctatcaatgc 157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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