View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10241_low_7 (Length: 290)
Name: NF10241_low_7
Description: NF10241
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10241_low_7 |
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Alignment Details
Target: chr1 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 282
Target Start/End: Complemental strand, 34092646 - 34092365
Alignment:
| Q |
1 |
gaactataaaatatctcactttataaatcagttttttaacgagcaattataattaatttaaaaaatcttttattgtaggcttgttaaagannnnnnnaaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
34092646 |
gaactataaaatatctcactttataaatcagttttttaacgagcaattataattaatttaaaaaatcttttattgtaggcttgttaaagatttttttaaa |
34092547 |
T |
|
| Q |
101 |
accaatattgatgttttaattaaatttgaaagatattttnnnnnnncgatgttatgttaaagatgaaataaatattttgattaaccttgtattaaataat |
200 |
Q |
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|||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
34092546 |
accaattttgatgttttaattaaatttgaaagatattttaaaaaaacgatgttatgttaaagattaaataaatattttgattaaccttgtattaaataat |
34092447 |
T |
|
| Q |
201 |
ttttggtagaaaaaatagaaaacttagtctgtatatgatgtgatttgttttcaaaggagattgtatatgatgtgatgtccat |
282 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34092446 |
ttttggtagaaaaaatagaaaacttagtctgtatatgatgtgatttgttttcaaaggagattgtatatgatgtgatgtccat |
34092365 |
T |
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