View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10242_high_4 (Length: 209)
Name: NF10242_high_4
Description: NF10242
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10242_high_4 |
 |  |
|
| [»] scaffold0015 (1 HSPs) |
 |  |  |
|
| [»] scaffold0011 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr1 (Bit Score: 166; Significance: 5e-89; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 4 - 201
Target Start/End: Complemental strand, 33799929 - 33799732
Alignment:
| Q |
4 |
gtttccgagtgtgcgtctctgttgcgtaatgttgttttgtaggactatattcatgacaggtggcggtggtttcttgaccctattaatggttatttcgtta |
103 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
33799929 |
gtttccgagtgtgcgtctctgttgcgtaatgttgttttgtaggactatattcatgacaggtggcggtggattcttgaccctattaatggttattccgtta |
33799830 |
T |
 |
| Q |
104 |
atgggacatataattatccgaggacggcaggtgtctcttctgagcgttgtttgttcgatgatttttggaagaagcaagtttcgcttaaggtctctgtg |
201 |
Q |
| |
|
|| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||| |||||| |||||||||||||||||||||||||| |
|
|
| T |
33799829 |
attggacatataattatccgacgacggcaggtgtctcttctgagcgtggtttgttcgacgatttgtggaagtagcaagtttcgcttaaggtctctgtg |
33799732 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 7 - 110
Target Start/End: Original strand, 37716190 - 37716293
Alignment:
| Q |
7 |
tccgagtgtgcgtctctgttgcgtaatgttgttttgtaggactatattcatgacaggtggcggtggtttcttgaccctattaatggttatttcgttaatg |
106 |
Q |
| |
|
|||||||||| |||||| |||| |||||||||||| ||| | ||||||||||||||||||| ||| ||||||||||||||||||| ||| |||||| | |
|
|
| T |
37716190 |
tccgagtgtgtgtctctattgcacaatgttgttttgcaggcccatattcatgacaggtggcgatggattcttgaccctattaatggctataccgttaaag |
37716289 |
T |
 |
| Q |
107 |
ggac |
110 |
Q |
| |
|
|||| |
|
|
| T |
37716290 |
ggac |
37716293 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 13 - 121
Target Start/End: Original strand, 17540767 - 17540875
Alignment:
| Q |
13 |
tgtgcgtctctgttgcgtaatgttgttttgtaggactatattcatgacaggtggcggtggtttcttgaccctattaatggttatttcgttaatgggacat |
112 |
Q |
| |
|
|||| |||| ||||||||||||||||||| ||| | ||||| ||||||||| | ||||| |||||||||||||||| || |||| ||||| ||||| | |
|
|
| T |
17540767 |
tgtgtgtctatgttgcgtaatgttgttttccaggtccatatttatgacaggttgtggtggattcttgaccctattaacggctattatgttaaggggactt |
17540866 |
T |
 |
| Q |
113 |
ataattatc |
121 |
Q |
| |
|
||||||||| |
|
|
| T |
17540867 |
ataattatc |
17540875 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 42910657 - 42910742
Alignment:
| Q |
10 |
gagtgtgcgtctctgttgcgtaatgttgttttgtaggactatattcatgacaggtggcggtggtttcttgaccctattaatggtta |
95 |
Q |
| |
|
|||||| ||||| ||||| ||||| |||||||| ||||| || ||| ||| |||||||||| | || | || |||||||||||||| |
|
|
| T |
42910657 |
gagtgttcgtctttgttgtgtaatattgttttgcaggaccatgttcttgataggtggcggttggttttggatcctattaatggtta |
42910742 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 4693448 - 4693516
Alignment:
| Q |
3 |
agtttccgagtgtgcgtctctgttgcgtaatgttgttttgtaggactatattcatgacaggtggcggtg |
71 |
Q |
| |
|
|||| |||||||| |||| ||||| ||||| |||||||| |||| || ||||||||||||||||||| |
|
|
| T |
4693448 |
agttaccgagtgttcgtccttgttgtgtaatattgttttgcaggatcatgttcatgacaggtggcggtg |
4693516 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 109; Significance: 5e-55; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 13850920 - 13851120
Alignment:
| Q |
1 |
acagtttccgagtgtgcgtctctgttgcgtaatgttgttttgtaggactatattcatgacaggtggcggtggtttcttgaccctattaatggttatttcg |
100 |
Q |
| |
|
||||||||||||||||| |||||||||| ||||||||||||| | ||| |||||||||||||||||| |||| |||||||||||||||||||||||| | |
|
|
| T |
13850920 |
acagtttccgagtgtgcatctctgttgcataatgttgttttgcatgaccatattcatgacaggtggcagtggattcttgaccctattaatggttattcca |
13851019 |
T |
 |
| Q |
101 |
ttaatgggacatataattatccgaggacggcaggtgtctcttctgagcgttgtttgttcgatgatttttggaagaagcaagtttcgcttaaggtctctgt |
200 |
Q |
| |
|
||| |||||||||| ||||| | ||||||||||||||||| |||||| || ||||||| ||||| ||||||||||||||| || ||||||||||||| |
|
|
| T |
13851020 |
ataaggggacatatacttatctcacaacggcaggtgtctcttcggagcgtggtatgttcgacgatttgtggaagaagcaagttccggttaaggtctctgt |
13851119 |
T |
 |
| Q |
201 |
g |
201 |
Q |
| |
|
| |
|
|
| T |
13851120 |
g |
13851120 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 12464239 - 12464358
Alignment:
| Q |
2 |
cagtttccgagtgtgcgtctctgttgcgtaatgttgttttgtaggactatattcatgacaggtggcggtggtttcttgaccctattaatggttatttcgt |
101 |
Q |
| |
|
||||| |||| ||||||| ||| |||| |||||||||| || |||| | |||| ||||||||||| ||| | ||||||| ||||||||| |||| || |
|
|
| T |
12464239 |
cagttaccgaatgtgcgtttctattgcataatgttgttctgcaggataacattcttgacaggtggcattggatccttgaccatattaatggatattatgt |
12464338 |
T |
 |
| Q |
102 |
taatgggacatataattatc |
121 |
Q |
| |
|
||| ||||| ||||| |||| |
|
|
| T |
12464339 |
taaggggacttataactatc |
12464358 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 9600990 - 9600934
Alignment:
| Q |
32 |
atgttgttttgtaggactatattcatgacaggtggcggtggtttcttgaccctatta |
88 |
Q |
| |
|
|||||||||||||||| | || || |||||||||||||||| | ||||| ||||||| |
|
|
| T |
9600990 |
atgttgttttgtaggattctactcttgacaggtggcggtggatccttgatcctatta |
9600934 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 9828561 - 9828505
Alignment:
| Q |
32 |
atgttgttttgtaggactatattcatgacaggtggcggtggtttcttgaccctatta |
88 |
Q |
| |
|
|||||||||||||||| | || || |||||||||||||||| | ||||| ||||||| |
|
|
| T |
9828561 |
atgttgttttgtaggattctactcttgacaggtggcggtggatccttgatcctatta |
9828505 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 69; Significance: 4e-31; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 10235658 - 10235538
Alignment:
| Q |
1 |
acagtttccgagtgtgcgtctctgttgcgtaatgttgttttgtaggactatattcatgacaggtggcggtggtttcttgaccctattaatggttatttcg |
100 |
Q |
| |
|
||||| || |||||||| |||||||||| ||||||||||||| |||| |||||| ||||||||||| |||| |||||||||| |||||||||||||||| |
|
|
| T |
10235658 |
acagtgtcggagtgtgcatctctgttgcataatgttgttttgcaggaacatattcttgacaggtggcagtggattcttgaccccattaatggttatttcg |
10235559 |
T |
 |
| Q |
101 |
ttaatgggacatataattatc |
121 |
Q |
| |
|
|||| |||||||||| ||||| |
|
|
| T |
10235558 |
ttaaggggacatatacttatc |
10235538 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 4 - 201
Target Start/End: Original strand, 32115809 - 32116006
Alignment:
| Q |
4 |
gtttccgagtgtgcgtctctgttgcgtaatgttgttttgtaggactatattcatgacaggtggcggtggtttcttgaccctattaatggttatttcgtta |
103 |
Q |
| |
|
||||| |||||||| ||| |||||| ||||||||||||| ||| ||| || |||||||||| ||||| |||| ||||||||||||||||||| |||| |
|
|
| T |
32115809 |
gtttcagagtgtgcatctttgttgcataatgttgttttgcgggatcataatcttgacaggtggaggtggattctcgaccctattaatggttattctgtta |
32115908 |
T |
 |
| Q |
104 |
atgggacatataattatccgaggacggcaggtgtctcttctgagcgttgtttgttcgatgatttttggaagaagcaagtttcgcttaaggtctctgtg |
201 |
Q |
| |
|
| |||||||||| ||||| | ||| ||||||| ||| |||||| || |||| ||||| || |||||||||||| || | ||||||||||||||| |
|
|
| T |
32115909 |
aggggacatatacttatctcatgacaccaggtgttcctttggagcgtggtatgtttgatgaattgtggaagaagcaaattcctcttaaggtctctgtg |
32116006 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 183
Target Start/End: Complemental strand, 9678298 - 9678149
Alignment:
| Q |
34 |
gttgttttgtaggactatattcatgacaggtggcggtggtttcttgaccctattaatggttatttcgttaatgggacatataattatccgaggacggcag |
133 |
Q |
| |
|
||||||||| ||||| ||||| |||||| ||||||||| |||||||||||||| ||| ||| ||||| || || |||||||||| |||||||| |
|
|
| T |
9678298 |
gttgttttgcaggacaatatttgtgacagatggcggtggattcttgaccctattcgaggtcattatgttaagggaacttataattatcttgtgacggcag |
9678199 |
T |
 |
| Q |
134 |
gtgtctcttctgagcgttgtttgttcgatgatttttggaagaagcaagtt |
183 |
Q |
| |
|
|| | ||| ||| ||| |||||||||||||| | ||| ||||||||||| |
|
|
| T |
9678198 |
ctgccccttatgatcgtggtttgttcgatgatgtgtggcagaagcaagtt |
9678149 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 21829778 - 21829859
Alignment:
| Q |
23 |
tgttgcgtaatgttgttttgtaggactatattcatgacaggtggcggtggtttcttgaccctattaatggttatttcgttaa |
104 |
Q |
| |
|
||||| |||||||||||||| |||| | | || |||||||||| ||||| ||||||| |||||||||||||||| |||||| |
|
|
| T |
21829778 |
tgttgtgtaatgttgttttgcaggattcttctcttgacaggtggtggtggattcttgatcctattaatggttattccgttaa |
21829859 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 200
Target Start/End: Original strand, 19176737 - 19176892
Alignment:
| Q |
45 |
ggactatattcatgacaggtggcggtggtttcttgaccctattaatggttatttcgttaatgggacatataattatccgaggacggcaggtgtctcttct |
144 |
Q |
| |
|
|||| |||||| ||||||||| ||||| | |||||||||||||||||||||| |||||| || || || | ||||| | |||| || |||| ||| |
|
|
| T |
19176737 |
ggaccatattcttgacaggtgaaggtggatgcttgaccctattaatggttattccgttaagggtacttacacttatctcacgacgccaaatgtccattcc |
19176836 |
T |
 |
| Q |
145 |
gagcgttgtttgttcgatgatttttggaagaagcaagtttcgcttaaggtctctgt |
200 |
Q |
| |
|
|||||| | ||| |||||||||||||||| ||||||| ||||||| ||||||| |
|
|
| T |
19176837 |
gagcgtggccggtttgatgatttttggaagatgcaagttccgcttaaaatctctgt |
19176892 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 64; Significance: 4e-28; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 194
Target Start/End: Complemental strand, 22758123 - 22757944
Alignment:
| Q |
15 |
tgcgtctctgttgcgtaatgttgttttgtaggactatattcatgacaggtggcggtggtttcttgaccctattaatggttatttcgttaatgggacatat |
114 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| |||||| | |||||||| ||||| || |||| ||||||| ||||||||| |||| |||||||| |
|
|
| T |
22758123 |
tgcgtctctgttgcgtaatgttgttttgcaggaccatattcttaacaggtggtggtggattgttgattctattaacggttatttcattaagaggacatat |
22758024 |
T |
 |
| Q |
115 |
aattatccgaggacggcaggtgtctcttctgagcgttgtttgttcgatgatttttggaagaagcaagtttcgcttaaggt |
194 |
Q |
| |
|
|||||| || || ||| ||| |||||||||| | |||||||||| ||| | ||| ||||||||||| |||| ||||| |
|
|
| T |
22758023 |
aattatttgacgatcgcatgtgcctcttctgagtgcggtttgttcgacgatctgtggcagaagcaagttccgctgaaggt |
22757944 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 33856786 - 33856591
Alignment:
| Q |
1 |
acagtttccgagtgtgcgtctctgttgcgtaatgttgttttgtaggactatattcatgacaggtggcggtggtttcttgaccctattaatggttatttcg |
100 |
Q |
| |
|
||||| || |||||||| |||||||||| ||||||||||||| ||||| ||||| |||||||||||||||| |||||||||||||| |||| |||| || |
|
|
| T |
33856786 |
acagtgtctgagtgtgcatctctgttgcataatgttgttttgcaggaccatattattgacaggtggcggtggattcttgaccctattcatggctattccg |
33856687 |
T |
 |
| Q |
101 |
ttaatgggacatataattatccgaggacggcaggtgtctcttctgagcgttgtttgttcgatgatttttggaagaagcaagtttcgcttaaggtct |
196 |
Q |
| |
|
| || || || |||| ||||| | |||| ||| || | | | |||||| | ||||||||||| | |||| |||||||||| ||||||||||| |
|
|
| T |
33856686 |
tcaagggcacttatacttatctcacgacgtcagatgaccttccggagcgtggcatgttcgatgatctgtggaggaagcaagttctgcttaaggtct |
33856591 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 25 - 112
Target Start/End: Original strand, 4994712 - 4994799
Alignment:
| Q |
25 |
ttgcgtaatgttgttttgtaggactatattcatgacaggtggcggtggtttcttgaccctattaatggttatttcgttaatgggacat |
112 |
Q |
| |
|
|||| ||||||||||||| |||| |||||| ||||||||||| |||| |||||||||| ||||||||||||| |||||| ||||||| |
|
|
| T |
4994712 |
ttgcataatgttgttttgcaggatcatattcttgacaggtggcagtggattcttgaccccattaatggttattccgttaaggggacat |
4994799 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 28623937 - 28623849
Alignment:
| Q |
30 |
taatgttgttttgtaggactatattcatgacaggtggcggtggtttcttgaccctattaatggttatttcgttaatgggacatataatt |
118 |
Q |
| |
|
|||| |||||||||||||| ||||| ||||| |||| ||||| |||| |||| |||||||||||||| ||||| |||||| ||||||| |
|
|
| T |
28623937 |
taatattgttttgtaggaccatattgttgacaagtggaggtggcttctcgaccttattaatggttattccgttagtgggacttataatt |
28623849 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 110
Target Start/End: Complemental strand, 30188021 - 30187941
Alignment:
| Q |
30 |
taatgttgttttgtaggactatattcatgacaggtggcggtggtttcttgaccctattaatggttatttcgttaatgggac |
110 |
Q |
| |
|
||||||||| ||| |||| | |||| |||||||||||||||| ||||||| |||||||||||||||| |||||| ||||| |
|
|
| T |
30188021 |
taatgttgtcttgcaggattttatttctgacaggtggcggtggattcttgatcctattaatggttattccgttaaggggac |
30187941 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 41737281 - 41737210
Alignment:
| Q |
1 |
acagtttccgagtgtgcgtctctgttgcgtaatgttgttttgtaggactatattcatgacaggtggcggtgg |
72 |
Q |
| |
|
||||| || |||||||| ||| |||||| ||||||||||||| ||||| ||||| |||||||||||||||| |
|
|
| T |
41737281 |
acagtgtctgagtgtgcatctttgttgcataatgttgttttgcaggaccatattattgacaggtggcggtgg |
41737210 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 11306781 - 11306719
Alignment:
| Q |
10 |
gagtgtgcgtctctgttgcgtaatgttgttttgtaggactatattcatgacaggtggcggtgg |
72 |
Q |
| |
|
|||||||| ||||| |||| ||||||||||||| ||||| ||| | |||||||||||||||| |
|
|
| T |
11306781 |
gagtgtgcatctctattgcataatgttgttttgcaggacaatactgttgacaggtggcggtgg |
11306719 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 52; Significance: 5e-21; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 16683522 - 16683617
Alignment:
| Q |
2 |
cagtttccgagtgtgcgtctctgttgcgtaatgttgttttgtaggactatattcatgacaggtggcggtggtttcttgaccctattaatggttatt |
97 |
Q |
| |
|
|||| ||| ||||||| |||||||||| ||||||||||||| | ||| ||||| |||||||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
16683522 |
cagtgtcccagtgtgcatctctgttgcataatgttgttttgcaagaccatattattgacaggtggcggtggcttcttaaccctattaatggttatt |
16683617 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 20695419 - 20695504
Alignment:
| Q |
19 |
tctctgttgcgtaatgttgttttgtaggactatattcatgacaggtggcggtggtttcttgaccctattaatggttatttcgttaa |
104 |
Q |
| |
|
|||||||||| |||||||||||| ||||| ||||| |||||||||||||||| ||||| |||||||| |||| |||| |||||| |
|
|
| T |
20695419 |
tctctgttgcagaatgttgttttgcaggaccatattattgacaggtggcggtggattcttaaccctattcatggctattccgttaa |
20695504 |
T |
 |
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Target: chr5 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 23647456 - 23647346
Alignment:
| Q |
11 |
agtgtgcgtctctgttgcgtaatgttgttttgtaggactatattcatgacaggtggcggtggtttcttgaccctattaatggttatttcgttaatgggac |
110 |
Q |
| |
|
||||||| ||| |||||| ||||||||||||| |||| |||||| ||||||||||| |||| |||||||||| |||||||||||| | ||| ||||| |
|
|
| T |
23647456 |
agtgtgcatctatgttgcataatgttgttttgcaggatcatattcttgacaggtggcagtggattcttgaccccattaatggttatactgataaggggac |
23647357 |
T |
 |
| Q |
111 |
atataattatc |
121 |
Q |
| |
|
||||| ||||| |
|
|
| T |
23647356 |
atatatttatc |
23647346 |
T |
 |
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Target: chr5; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 23811117 - 23811227
Alignment:
| Q |
11 |
agtgtgcgtctctgttgcgtaatgttgttttgtaggactatattcatgacaggtggcggtggtttcttgaccctattaatggttatttcgttaatgggac |
110 |
Q |
| |
|
||||||| ||| |||||| ||||||||||||| |||| |||||| ||||||||||| |||| |||||||||| |||||||||||| | ||| ||||| |
|
|
| T |
23811117 |
agtgtgcatctatgttgcataatgttgttttgcaggatcatattcttgacaggtggcagtggattcttgaccccattaatggttatactgataaggggac |
23811216 |
T |
 |
| Q |
111 |
atataattatc |
121 |
Q |
| |
|
||||| ||||| |
|
|
| T |
23811217 |
atatatttatc |
23811227 |
T |
 |
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Target: scaffold0015 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0015
Description:
Target: scaffold0015; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 5637 - 5561
Alignment:
| Q |
7 |
tccgagtgtgcgtctctgttgcgtaatgttgttttgtaggactatattcatgacaggtggcggtggtttcttgaccc |
83 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||| ||||| | | | |||||||||||||||||| || ||||| |
|
|
| T |
5637 |
tccgagtgtgcatctctgttgtataatgttgttttgcaggaccagacttttgacaggtggcggtggttgctcgaccc |
5561 |
T |
 |
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Target: scaffold0011 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0011
Description:
Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 249040 - 249102
Alignment:
| Q |
10 |
gagtgtgcgtctctgttgcgtaatgttgttttgtaggactatattcatgacaggtggcggtgg |
72 |
Q |
| |
|
|||||||| ||| |||||| ||||||||||||| ||||| ||| | |||||||||||||||| |
|
|
| T |
249040 |
gagtgtgcatctttgttgcataatgttgttttgcaggaccatactactgacaggtggcggtgg |
249102 |
T |
 |
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