View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10243_low_7 (Length: 217)
Name: NF10243_low_7
Description: NF10243
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10243_low_7 |
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Alignment Details
Target: chr4 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 13 - 200
Target Start/End: Original strand, 39979172 - 39979357
Alignment:
| Q |
13 |
cataggtacaagtatgttcaatctgtgagaaagcataggtttcgcaggaatcattttgtctaaagtgtggctatctcctcttatcctctcttcaggaaga |
112 |
Q |
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| T |
39979172 |
cataggtacaagtatgttcaatctgtgagaaagcataggtttcgcaggaatcattttgtctaaagtgtggctatctcctcttatcctctcttcaggaaga |
39979271 |
T |
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| Q |
113 |
acatgttgcaatcatacactactatgttttgtagctagctcatcagaattttcacaatttagtcgatgatggactagcatggcttcac |
200 |
Q |
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| T |
39979272 |
acatgttgcaatcatacactactatgttttgtag--agctcatcagaattttcacaatttagtcgatgatggactagcatggcttcac |
39979357 |
T |
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