View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10249_low_3 (Length: 244)

Name: NF10249_low_3
Description: NF10249
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10249_low_3
NF10249_low_3
[»] scaffold0116 (1 HSPs)
scaffold0116 (77-233)||(29978-30134)
[»] chr2 (27 HSPs)
chr2 (77-233)||(25601911-25602067)
chr2 (87-162)||(22274681-22274755)
chr2 (77-162)||(22283914-22283998)
chr2 (77-165)||(28974003-28974092)
chr2 (77-164)||(27261761-27261849)
chr2 (77-156)||(32465822-32465901)
chr2 (153-230)||(67856-67933)
chr2 (77-164)||(22580063-22580151)
chr2 (77-164)||(23836909-23836996)
chr2 (78-155)||(19433537-19433614)
chr2 (77-154)||(36890889-36890966)
chr2 (77-164)||(271126-271213)
chr2 (77-143)||(4448337-4448402)
chr2 (78-160)||(25305405-25305487)
chr2 (78-159)||(722356-722437)
chr2 (78-150)||(19666498-19666570)
chr2 (153-211)||(7321586-7321644)
chr2 (77-164)||(24571496-24571583)
chr2 (81-154)||(9653112-9653186)
chr2 (121-162)||(12728352-12728393)
chr2 (121-162)||(24686036-24686077)
chr2 (77-154)||(25876123-25876200)
chr2 (121-162)||(34824435-34824476)
chr2 (83-154)||(67958-68029)
chr2 (133-162)||(42178236-42178265)
chr2 (78-154)||(23821810-23821886)
chr2 (78-154)||(23830889-23830965)
[»] chr8 (50 HSPs)
chr8 (77-233)||(41507021-41507177)
chr8 (85-233)||(24929018-24929165)
chr8 (114-216)||(2544855-2544957)
chr8 (77-162)||(24717074-24717159)
chr8 (77-164)||(41246614-41246701)
chr8 (153-233)||(23217924-23218004)
chr8 (78-165)||(23837153-23837240)
chr8 (77-164)||(20567203-20567290)
chr8 (77-164)||(20567362-20567449)
chr8 (77-164)||(20573396-20573483)
chr8 (77-164)||(20573555-20573642)
chr8 (87-143)||(29759919-29759975)
chr8 (153-230)||(22981241-22981318)
chr8 (77-165)||(19993258-19993346)
chr8 (153-233)||(22321574-22321654)
chr8 (77-128)||(21680994-21681045)
chr8 (81-154)||(20481571-20481644)
chr8 (81-164)||(20648037-20648121)
chr8 (81-164)||(20654113-20654197)
chr8 (83-160)||(21198362-21198439)
chr8 (80-164)||(39446973-39447057)
chr8 (78-150)||(23226281-23226353)
chr8 (77-129)||(38533640-38533692)
chr8 (78-164)||(31194529-31194615)
chr8 (166-244)||(43685584-43685662)
chr8 (81-154)||(274409-274482)
chr8 (81-154)||(641367-641440)
chr8 (81-154)||(827173-827246)
chr8 (77-164)||(37611624-37611711)
chr8 (153-244)||(22907516-22907607)
chr8 (166-244)||(5238125-5238203)
chr8 (78-164)||(17285223-17285309)
chr8 (81-143)||(22736046-22736108)
chr8 (166-244)||(24661395-24661473)
chr8 (121-162)||(15319414-15319455)
chr8 (121-162)||(15499783-15499824)
chr8 (81-154)||(16039097-16039170)
chr8 (121-162)||(22006513-22006554)
chr8 (121-162)||(22089049-22089090)
chr8 (78-155)||(33528391-33528468)
chr8 (77-146)||(39115249-39115318)
chr8 (174-222)||(21259637-21259685)
chr8 (131-162)||(13662530-13662561)
chr8 (77-124)||(22235007-22235054)
chr8 (77-143)||(25122513-25122579)
chr8 (133-162)||(3431548-3431577)
chr8 (78-155)||(5854579-5854656)
chr8 (133-162)||(13721195-13721224)
chr8 (78-143)||(15969796-15969860)
chr8 (78-150)||(23149751-23149823)
[»] chr5 (31 HSPs)
chr5 (77-233)||(2031697-2031853)
chr5 (131-233)||(17471854-17471956)
chr5 (153-233)||(25004863-25004943)
chr5 (87-143)||(11342661-11342717)
chr5 (77-143)||(1168408-1168474)
chr5 (77-164)||(21906675-21906763)
chr5 (77-155)||(11584016-11584094)
chr5 (77-156)||(21397053-21397132)
chr5 (77-164)||(24475539-24475626)
chr5 (77-143)||(19405514-19405580)
chr5 (77-164)||(11337390-11337476)
chr5 (77-143)||(23466434-23466500)
chr5 (77-143)||(28261498-28261564)
chr5 (81-154)||(20712042-20712115)
chr5 (78-164)||(16595463-16595550)
chr5 (77-164)||(21646943-21647030)
chr5 (84-164)||(4865218-4865298)
chr5 (77-116)||(24183333-24183372)
chr5 (166-244)||(20623007-20623085)
chr5 (81-154)||(21204891-21204965)
chr5 (166-244)||(21233675-21233753)
chr5 (121-162)||(1219775-1219816)
chr5 (81-154)||(21650661-21650734)
chr5 (121-162)||(22883339-22883380)
chr5 (77-154)||(23493885-23493962)
chr5 (78-146)||(19862183-19862251)
chr5 (133-162)||(9730650-9730679)
chr5 (133-162)||(23514521-23514550)
chr5 (78-143)||(32966352-32966417)
chr5 (78-150)||(6456594-6456666)
chr5 (78-150)||(29917935-29918007)
[»] scaffold1734 (1 HSPs)
scaffold1734 (97-233)||(1286-1422)
[»] scaffold0122 (1 HSPs)
scaffold0122 (77-233)||(24401-24557)
[»] chr4 (34 HSPs)
chr4 (77-233)||(34395144-34395300)
chr4 (91-162)||(5682753-5682824)
chr4 (86-162)||(25119428-25119505)
chr4 (77-164)||(16732124-16732212)
chr4 (87-154)||(14951728-14951795)
chr4 (77-164)||(44055871-44055958)
chr4 (77-164)||(23270138-23270225)
chr4 (153-216)||(34177767-34177830)
chr4 (77-129)||(55376801-55376853)
chr4 (162-233)||(19559410-19559481)
chr4 (85-164)||(18494540-18494620)
chr4 (77-154)||(53704937-53705014)
chr4 (78-165)||(14901187-14901274)
chr4 (77-164)||(53907900-53907987)
chr4 (78-164)||(47535251-47535337)
chr4 (77-129)||(13809714-13809766)
chr4 (77-164)||(21959667-21959755)
chr4 (77-129)||(44346818-44346870)
chr4 (85-160)||(41166158-41166233)
chr4 (81-142)||(12837408-12837468)
chr4 (78-143)||(37957230-37957295)
chr4 (79-117)||(45459061-45459099)
chr4 (121-162)||(18168930-18168971)
chr4 (78-143)||(19821981-19822046)
chr4 (159-244)||(26680070-26680155)
chr4 (77-129)||(27960963-27961014)
chr4 (81-167)||(15272528-15272615)
chr4 (81-128)||(30232704-30232751)
chr4 (77-115)||(820117-820154)
chr4 (153-183)||(9795314-9795344)
chr4 (78-155)||(7964916-7964993)
chr4 (77-154)||(15044794-15044871)
chr4 (77-154)||(15109553-15109630)
chr4 (77-164)||(30457859-30457946)
[»] scaffold0160 (2 HSPs)
scaffold0160 (77-233)||(3406-3562)
scaffold0160 (77-140)||(1-64)
[»] scaffold0012 (1 HSPs)
scaffold0012 (77-233)||(253193-253349)
[»] chr3 (64 HSPs)
chr3 (92-233)||(13838783-13838923)
chr3 (146-233)||(15468630-15468717)
chr3 (146-233)||(22275088-22275175)
chr3 (77-162)||(17956196-17956281)
chr3 (153-233)||(48421624-48421704)
chr3 (87-154)||(30152908-30152975)
chr3 (77-155)||(33341847-33341924)
chr3 (77-154)||(14295404-14295481)
chr3 (153-233)||(18969968-18970048)
chr3 (77-155)||(7853948-7854025)
chr3 (77-155)||(19946664-19946741)
chr3 (153-233)||(39656390-39656467)
chr3 (77-154)||(45581597-45581674)
chr3 (77-164)||(22144476-22144563)
chr3 (153-222)||(14177158-14177227)
chr3 (77-154)||(14298388-14298464)
chr3 (77-154)||(14304015-14304091)
chr3 (77-154)||(28558172-28558249)
chr3 (77-154)||(54038336-54038413)
chr3 (77-164)||(35123652-35123739)
chr3 (77-164)||(55441053-55441141)
chr3 (77-164)||(13817471-13817558)
chr3 (77-147)||(11329165-11329235)
chr3 (81-147)||(14528220-14528286)
chr3 (77-147)||(17139481-17139551)
chr3 (77-155)||(54685513-54685590)
chr3 (77-154)||(17523094-17523170)
chr3 (77-164)||(50112255-50112342)
chr3 (78-164)||(17204656-17204742)
chr3 (77-142)||(14059417-14059482)
chr3 (77-154)||(14301031-14301108)
chr3 (77-164)||(16996263-16996349)
chr3 (81-147)||(12560444-12560510)
chr3 (81-154)||(23492339-23492412)
chr3 (81-154)||(38167880-38167953)
chr3 (77-154)||(54423979-54424055)
chr3 (77-165)||(317712-317800)
chr3 (77-129)||(16182149-16182201)
chr3 (78-164)||(17191500-17191583)
chr3 (83-143)||(47784957-47785017)
chr3 (81-128)||(17100645-17100692)
chr3 (81-128)||(17101330-17101377)
chr3 (80-143)||(17960520-17960583)
chr3 (78-129)||(53898660-53898710)
chr3 (78-140)||(3576643-3576705)
chr3 (81-154)||(3992515-3992589)
chr3 (121-162)||(49232396-49232437)
chr3 (80-164)||(6146953-6147036)
chr3 (78-150)||(12952934-12953006)
chr3 (81-121)||(19261047-19261087)
chr3 (77-164)||(19570892-19570978)
chr3 (81-167)||(53770993-53771080)
chr3 (78-155)||(1990767-1990845)
chr3 (77-115)||(12349934-12349971)
chr3 (77-143)||(38811212-38811278)
chr3 (77-154)||(12488930-12489007)
chr3 (133-162)||(16934241-16934270)
chr3 (77-109)||(8631801-8631833)
chr3 (78-150)||(9590959-9591031)
chr3 (109-153)||(11196444-11196488)
chr3 (77-165)||(15876023-15876111)
chr3 (172-244)||(16744436-16744508)
chr3 (134-162)||(16821099-16821127)
chr3 (77-129)||(16880114-16880166)
[»] scaffold0001 (4 HSPs)
scaffold0001 (105-233)||(171794-171922)
scaffold0001 (105-233)||(177497-177625)
scaffold0001 (77-164)||(70826-70913)
scaffold0001 (77-143)||(60784-60849)
[»] scaffold0075 (1 HSPs)
scaffold0075 (77-233)||(4831-4984)
[»] scaffold0009 (1 HSPs)
scaffold0009 (85-233)||(271914-272061)
[»] scaffold0396 (1 HSPs)
scaffold0396 (77-233)||(11912-12068)
[»] scaffold0032 (3 HSPs)
scaffold0032 (117-229)||(13537-13649)
scaffold0032 (153-230)||(116284-116361)
scaffold0032 (81-154)||(55546-55620)
[»] chr6 (33 HSPs)
chr6 (77-162)||(35015369-35015454)
chr6 (77-162)||(19983503-19983588)
chr6 (78-164)||(18381888-18381974)
chr6 (77-155)||(18583299-18583376)
chr6 (159-233)||(15889840-15889914)
chr6 (77-164)||(32898746-32898833)
chr6 (77-143)||(31628245-31628311)
chr6 (153-230)||(25640683-25640760)
chr6 (77-155)||(18823600-18823677)
chr6 (77-155)||(18839455-18839532)
chr6 (160-233)||(22585681-22585754)
chr6 (160-233)||(22590512-22590585)
chr6 (153-233)||(15005034-15005114)
chr6 (81-167)||(15742439-15742525)
chr6 (81-154)||(18777112-18777185)
chr6 (77-164)||(25744417-25744504)
chr6 (79-129)||(25367443-25367493)
chr6 (77-129)||(18432634-18432686)
chr6 (85-164)||(21623124-21623203)
chr6 (80-142)||(15740207-15740269)
chr6 (77-115)||(16086022-16086060)
chr6 (77-147)||(28195298-28195367)
chr6 (81-154)||(18002712-18002784)
chr6 (77-150)||(18398909-18398981)
chr6 (81-154)||(18570246-18570318)
chr6 (77-164)||(22440890-22440977)
chr6 (81-167)||(23994875-23994962)
chr6 (121-159)||(16556394-16556432)
chr6 (121-159)||(16632950-16632988)
chr6 (121-162)||(22225993-22226034)
chr6 (78-143)||(25919590-25919655)
chr6 (78-154)||(17083383-17083459)
chr6 (78-150)||(33538574-33538646)
[»] scaffold0016 (4 HSPs)
scaffold0016 (87-162)||(162401-162476)
scaffold0016 (77-162)||(166469-166554)
scaffold0016 (78-164)||(116718-116804)
scaffold0016 (81-164)||(164171-164254)
[»] scaffold0686 (1 HSPs)
scaffold0686 (77-162)||(6295-6380)
[»] scaffold0184 (1 HSPs)
scaffold0184 (77-162)||(31492-31577)
[»] scaffold0078 (1 HSPs)
scaffold0078 (77-162)||(41267-41352)
[»] scaffold0483 (2 HSPs)
scaffold0483 (161-233)||(1017-1089)
scaffold0483 (78-164)||(6617-6703)
[»] scaffold0109 (1 HSPs)
scaffold0109 (161-233)||(45804-45876)
[»] scaffold0021 (3 HSPs)
scaffold0021 (153-222)||(22186-22255)
scaffold0021 (77-164)||(132454-132541)
scaffold0021 (77-147)||(11660-11730)
[»] scaffold1295 (1 HSPs)
scaffold1295 (153-229)||(157-233)
[»] scaffold0507 (1 HSPs)
scaffold0507 (153-229)||(1629-1705)
[»] chr7 (39 HSPs)
chr7 (77-164)||(11287372-11287460)
chr7 (77-143)||(126392-126458)
chr7 (77-162)||(1937212-1937297)
chr7 (77-164)||(17224142-17224229)
chr7 (153-233)||(13351999-13352079)
chr7 (80-155)||(7284267-7284341)
chr7 (77-164)||(15822635-15822722)
chr7 (77-154)||(32494258-32494335)
chr7 (77-129)||(16570210-16570262)
chr7 (77-129)||(16595400-16595452)
chr7 (77-164)||(35094773-35094860)
chr7 (78-164)||(49047879-49047966)
chr7 (77-147)||(12248325-12248395)
chr7 (77-154)||(111481-111557)
chr7 (77-154)||(26070468-26070545)
chr7 (77-154)||(26094255-26094332)
chr7 (159-230)||(15977975-15978046)
chr7 (77-164)||(39046827-39046914)
chr7 (77-164)||(13274742-13274830)
chr7 (153-244)||(7292886-7292977)
chr7 (77-143)||(45452370-45452435)
chr7 (81-154)||(3894991-3895064)
chr7 (81-128)||(3049575-3049622)
chr7 (83-154)||(12370050-12370121)
chr7 (166-244)||(11516265-11516343)
chr7 (78-164)||(12758944-12759029)
chr7 (166-244)||(15441711-15441789)
chr7 (166-244)||(30262276-30262354)
chr7 (77-165)||(47289736-47289824)
chr7 (77-164)||(143601-143688)
chr7 (174-230)||(18151494-18151550)
chr7 (81-167)||(42056505-42056592)
chr7 (77-163)||(44865184-44865270)
chr7 (133-162)||(371048-371077)
chr7 (77-154)||(13377495-13377572)
chr7 (133-162)||(14251165-14251194)
chr7 (78-155)||(14272091-14272168)
chr7 (121-162)||(15951046-15951087)
chr7 (78-155)||(48356609-48356686)
[»] chr1 (25 HSPs)
chr1 (87-162)||(44035192-44035267)
chr1 (77-154)||(15861636-15861713)
chr1 (77-154)||(22366985-22367062)
chr1 (83-164)||(13377050-13377131)
chr1 (77-164)||(35522523-35522610)
chr1 (77-164)||(51627868-51627956)
chr1 (77-164)||(20177131-20177218)
chr1 (77-154)||(21859977-21860054)
chr1 (78-143)||(22829629-22829694)
chr1 (77-154)||(41212035-41212112)
chr1 (77-164)||(21718184-21718271)
chr1 (77-165)||(49967606-49967693)
chr1 (83-165)||(41229149-41229231)
chr1 (78-143)||(19603074-19603139)
chr1 (78-147)||(22143566-22143635)
chr1 (78-143)||(27674774-27674838)
chr1 (81-154)||(35054722-35054795)
chr1 (121-162)||(18060013-18060054)
chr1 (77-164)||(22403314-22403401)
chr1 (77-116)||(9784304-9784343)
chr1 (81-120)||(27329963-27330002)
chr1 (78-148)||(21194986-21195056)
chr1 (166-244)||(51452530-51452608)
chr1 (133-162)||(21650307-21650336)
chr1 (77-164)||(36356497-36356581)
[»] scaffold0120 (2 HSPs)
scaffold0120 (77-155)||(31176-31254)
scaffold0120 (77-155)||(21477-21555)
[»] scaffold0338 (1 HSPs)
scaffold0338 (77-164)||(8942-9030)
[»] scaffold0035 (2 HSPs)
scaffold0035 (77-164)||(109666-109754)
scaffold0035 (77-164)||(118167-118255)
[»] scaffold0833 (1 HSPs)
scaffold0833 (77-155)||(3265-3342)
[»] scaffold0053 (1 HSPs)
scaffold0053 (78-164)||(77052-77138)
[»] scaffold0342 (1 HSPs)
scaffold0342 (77-162)||(663-747)
[»] scaffold0673 (2 HSPs)
scaffold0673 (77-156)||(1026-1105)
scaffold0673 (77-161)||(7052-7136)
[»] scaffold0480 (2 HSPs)
scaffold0480 (77-164)||(5450-5537)
scaffold0480 (77-147)||(9086-9156)
[»] scaffold0011 (2 HSPs)
scaffold0011 (77-164)||(255018-255105)
scaffold0011 (77-164)||(261624-261711)
[»] scaffold1164 (1 HSPs)
scaffold1164 (77-154)||(1347-1424)
[»] scaffold0610 (1 HSPs)
scaffold0610 (77-154)||(780-857)
[»] scaffold0195 (1 HSPs)
scaffold0195 (77-154)||(722-799)
[»] scaffold0039 (2 HSPs)
scaffold0039 (77-154)||(12732-12809)
scaffold0039 (77-154)||(19113-19190)
[»] scaffold0022 (3 HSPs)
scaffold0022 (78-143)||(112747-112812)
scaffold0022 (77-164)||(109545-109633)
scaffold0022 (77-143)||(103126-103192)
[»] scaffold0014 (2 HSPs)
scaffold0014 (77-164)||(85287-85375)
scaffold0014 (77-164)||(159257-159345)
[»] scaffold0008 (1 HSPs)
scaffold0008 (77-161)||(22650-22734)
[»] scaffold1867 (1 HSPs)
scaffold1867 (77-155)||(110-187)
[»] scaffold0158 (2 HSPs)
scaffold0158 (77-155)||(24925-25001)
scaffold0158 (77-114)||(25218-25254)
[»] scaffold0740 (1 HSPs)
scaffold0740 (77-165)||(4262-4350)
[»] scaffold0554 (1 HSPs)
scaffold0554 (77-164)||(1871-1959)
[»] scaffold0359 (2 HSPs)
scaffold0359 (77-129)||(1308-1360)
scaffold0359 (77-164)||(11855-11942)
[»] scaffold0091 (2 HSPs)
scaffold0091 (77-164)||(32159-32246)
scaffold0091 (77-164)||(42057-42144)
[»] scaffold0044 (1 HSPs)
scaffold0044 (77-164)||(38254-38341)
[»] scaffold0589 (1 HSPs)
scaffold0589 (81-147)||(7807-7873)
[»] scaffold0310 (1 HSPs)
scaffold0310 (77-155)||(318-395)
[»] scaffold0190 (1 HSPs)
scaffold0190 (77-143)||(9914-9980)
[»] scaffold0013 (1 HSPs)
scaffold0013 (78-164)||(35435-35520)
[»] scaffold0077 (1 HSPs)
scaffold0077 (81-154)||(15682-15755)
[»] scaffold0092 (1 HSPs)
scaffold0092 (81-129)||(3310-3358)
[»] scaffold0079 (1 HSPs)
scaffold0079 (153-233)||(3969-4049)
[»] scaffold0031 (1 HSPs)
scaffold0031 (77-164)||(30999-31087)
[»] scaffold0574 (1 HSPs)
scaffold0574 (81-154)||(9723-9796)
[»] scaffold0465 (1 HSPs)
scaffold0465 (81-154)||(10182-10255)
[»] scaffold0095 (1 HSPs)
scaffold0095 (80-164)||(33935-34019)
[»] scaffold0063 (1 HSPs)
scaffold0063 (160-233)||(44249-44322)
[»] scaffold0057 (1 HSPs)
scaffold0057 (153-230)||(5933-6010)
[»] scaffold0150 (1 HSPs)
scaffold0150 (83-155)||(28501-28573)
[»] scaffold0083 (2 HSPs)
scaffold0083 (77-164)||(14173-14260)
scaffold0083 (77-164)||(14833-14920)
[»] scaffold0034 (1 HSPs)
scaffold0034 (77-128)||(79856-79907)
[»] scaffold1272 (1 HSPs)
scaffold1272 (78-164)||(265-351)
[»] scaffold0597 (1 HSPs)
scaffold0597 (81-154)||(1194-1268)
[»] scaffold0244 (1 HSPs)
scaffold0244 (81-154)||(22720-22793)
[»] scaffold0037 (2 HSPs)
scaffold0037 (81-154)||(94941-95014)
scaffold0037 (81-154)||(24936-25009)
[»] scaffold0025 (1 HSPs)
scaffold0025 (81-154)||(146567-146640)
[»] scaffold0706 (1 HSPs)
scaffold0706 (81-145)||(6759-6823)
[»] scaffold0251 (2 HSPs)
scaffold0251 (81-154)||(13602-13676)
scaffold0251 (81-154)||(21576-21650)
[»] scaffold0234 (1 HSPs)
scaffold0234 (81-147)||(17620-17686)
[»] scaffold0175 (1 HSPs)
scaffold0175 (81-154)||(14914-14988)
[»] scaffold0117 (1 HSPs)
scaffold0117 (77-143)||(11772-11837)
[»] scaffold0004 (2 HSPs)
scaffold0004 (81-154)||(193703-193777)
scaffold0004 (81-128)||(186741-186789)
[»] scaffold0162 (1 HSPs)
scaffold0162 (78-167)||(7230-7319)
[»] scaffold0080 (1 HSPs)
scaffold0080 (78-155)||(44003-44080)
[»] scaffold0240 (1 HSPs)
scaffold0240 (77-108)||(7581-7612)
[»] scaffold0213 (1 HSPs)
scaffold0213 (131-162)||(29122-29153)
[»] scaffold0107 (1 HSPs)
scaffold0107 (132-162)||(39606-39636)
[»] scaffold0076 (1 HSPs)
scaffold0076 (121-162)||(39063-39104)
[»] scaffold0023 (1 HSPs)
scaffold0023 (121-162)||(154262-154303)
[»] scaffold0970 (1 HSPs)
scaffold0970 (78-154)||(2421-2497)
[»] scaffold0303 (1 HSPs)
scaffold0303 (81-145)||(244-308)


Alignment Details
Target: scaffold0116 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 77 - 233
Target Start/End: Complemental strand, 30134 - 29978
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaattatgacatgttgt 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30134 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaattatgacatgttgt 30035  T
Q  177 tgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatg 233  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  30034 tgttgaaatatgatggaatgcatgatcataagttgttgttgtggttaattgttgatg 29978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 149; Significance: 8e-79; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 77 - 233
Target Start/End: Complemental strand, 25602067 - 25601911
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaattatgacatgttgt 176  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25602067 atgataaatcatggcttaggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaattatgacatgttgt 25601968  T
Q  177 tgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatg 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25601967 tgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatg 25601911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 87 - 162
Target Start/End: Complemental strand, 22274755 - 22274681
Alignment:
Q  87 atggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaa 162  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22274755 atggcttgggtt-gcatgattcatgaattgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaa 22274681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 77 - 162
Target Start/End: Complemental strand, 22283998 - 22283914
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||| || ||||||||||||| ||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  22283998 atgatgatacatggcttgggtt-gcatgattcatgaattgctgttgagaaatgaattgttgttggtggttttgtgaaattggtgaa 22283914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 77 - 165
Target Start/End: Complemental strand, 28974092 - 28974003
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtg-aaattggtgaatta 165  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||   ||||||||||| ||| ||| ||||||||||||||    
T  28974092 atgataattcatggcttgggtttgcatgattcatgatttgttgatgagaaatgagatgttgttggtgttttagtgaaaattggtgaatta 28974003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 27261849 - 27261761
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa-ttggtgaatt 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||   ||||||||||| ||| |||||| ||||||||||    
T  27261849 atgataattcatggcttgggtttgcatgattcatgatttgttgttaagaaatgagatgttgttggtgttttggtgaaacttggtgaatt 27261761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 77 - 156
Target Start/End: Complemental strand, 32465901 - 32465822
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaatt 156  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||   ||||||||||| ||| ||||||||    
T  32465901 atgataattcatggcttgggtttgcatgattcatggtttgttgttgagaaatgagatgttgttggtgttttggtgaaatt 32465822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 153 - 230
Target Start/End: Complemental strand, 67933 - 67856
Alignment:
Q  153 aattggtgaattatgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttg 230  Q
    ||||||||| ||||||||||||||||||| |||||||||||||| ||||| |||| |||| |||||||||||||||||    
T  67933 aattggtgatttatgacatgttgttgttgtaatatgatggaatgtatgattataatttgtcgttgtggttaattgttg 67856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 22580063 - 22580151
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgt-gaaattggtgaatt 164  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||   ||||||||||| ||| ||  |||||||||||||    
T  22580063 atgataattcatggcttgggtatgcatgattcatgatttgttgtggagaaatgagatgttgttggtgttttggtaaaaattggtgaatt 22580151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 23836909 - 23836996
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    ||||||||||||| ||||||||||||| |||| ||||||||||||||||||||   ||||||||||| |||  ||||| |||||||||    
T  23836909 atgataattcatgacttgggtttgcataattcttgatttgttgttgagaaatgagatgttgttggtgttttgatgaaaatggtgaatt 23836996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 78 - 155
Target Start/End: Original strand, 19433537 - 19433614
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaat 155  Q
    |||| ||||||||||||||| | ||| ||||||||||||||| |||||||||  ||||||||||||||||||| ||||    
T  19433537 tgatgattcatggcttgggtgttcataattcatgatttgttgatgagaaatgagttgttgttggtggttttgtaaaat 19433614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 154
Target Start/End: Original strand, 36890889 - 36890966
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||| ||||||||||||||| |||||||||| |||||||||||||||||||   ||||||||| |||||| ||||||    
T  36890889 atgattattcatggcttgggtatgcatgattcttgatttgttgttgagaaataagttgttgttgttggtttggtgaaa 36890966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 271213 - 271126
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtg-aaattggtgaatt 164  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||| ||||   ||||||||||| ||| ||| |||||||||||||    
T  271213 atgataattcatagcttgggtttgcatgattcatgatttg-tgttgaggaatgagatgttgttggtgctttggtgaaaattggtgaatt 271126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 143
Target Start/End: Original strand, 4448337 - 4448402
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtg 143  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||   |||||||||||    
T  4448337 atgataattcatggcttgggtttgcatgattcatgatttg-tgttgaaaaatgagatgttgttggtg 4448402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 160
Target Start/End: Complemental strand, 25305487 - 25305405
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtg 160  Q
    |||| ||||||||| ||||| | ||| ||||||||||||||| |||||||||  ||||||||||| |||||| ||||||||||    
T  25305487 tgatgattcatggcctgggtattcataattcatgatttgttgatgagaaatgagttgttgttggtagttttgcgaaattggtg 25305405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 78 - 159
Target Start/End: Complemental strand, 722437 - 722356
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggt 159  Q
    |||||||||||||||||||| ||||| ||||||||||| ||| ||||| |||  ||||||||||||  ||||| ||||||||    
T  722437 tgataattcatggcttgggtgtgcataattcatgatttattgatgagatatgagttgttgttggtgactttgtaaaattggt 722356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 150
Target Start/End: Complemental strand, 19666570 - 19666498
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgt 150  Q
    |||| ||||||||||||||| | ||| ||||||| |||| || |||||||||||||||||||| |||||||||    
T  19666570 tgatgattcatggcttgggtattcataattcatgttttgatgatgagaaatggattgttgttgttggttttgt 19666498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 7321644 - 7321586
Alignment:
Q  153 aattggtgaattatgacatgttgttgttgaaatatgatggaatgcatgatcataagttg 211  Q
    ||||| |||||| |||||||||||||||||| | |||||||||||||||| ||||||||    
T  7321644 aattgatgaattgtgacatgttgttgttgaattttgatggaatgcatgattataagttg 7321586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 24571496 - 24571583
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgt-gaaattggtgaatt 164  Q
    ||||||| ||||| ||||| | || ||||||||||||||||||||||||||||   ||||||||||||||| ||  |||||||||||||    
T  24571496 atgataactcatg-cttggctatgtatgattcatgatttgttgttgagaaatgagatgttgttggtggtttggtaaaaattggtgaatt 24571583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 9653112 - 9653186
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatga-tttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||||||||||||||| |||||||||||| | |||||||||| |||||   ||||||||| |||||| ||||||    
T  9653112 taattcatggcttgggtatgcatgattcataattttgttgttgtgaaataagttgttgttgttggtttggtgaaa 9653186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 162
Target Start/End: Complemental strand, 12728393 - 12728352
Alignment:
Q  121 tgagaaatggattgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||||||  ||||||||||||||||||||||||||||||||    
T  12728393 tgagaaataaattgttgttggtggttttgtgaaattggtgaa 12728352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 24686036 - 24686077
Alignment:
Q  121 tgagaaatggattgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||||||  ||||||||||||||||||||||||||||||||    
T  24686036 tgagaaataaattgttgttggtggttttgtgaaattggtgaa 24686077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 154
Target Start/End: Original strand, 25876123 - 25876200
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||||||||||||||||||||||||| |||| ||  ||||| ||| |||||   ||||||||| |||||| ||||||    
T  25876123 atgataattcatggcttgggtttgcataattcttggcttgttattgtgaaataagttgttgttgttggtttggtgaaa 25876200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 162
Target Start/End: Complemental strand, 34824476 - 34824435
Alignment:
Q  121 tgagaaatggattgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||||||  ||||||||||||||||||||||||||||||||    
T  34824476 tgagaaataaattgttgttggtggttttgtgaaattggtgaa 34824435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 154
Target Start/End: Complemental strand, 68029 - 67958
Alignment:
Q  83 attcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    |||||||||||| || | ||| |||||||||||| || ||||||||   ||||||||| |||||||||||||    
T  68029 attcatggcttgcgtgttcataattcatgatttgatgatgagaaataagttgttgttgttggttttgtgaaa 67958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 162
Target Start/End: Original strand, 42178236 - 42178265
Alignment:
Q  133 tgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||||||||||||||||||||||||||||    
T  42178236 tgttgttggtggttttgtgaaattggtgaa 42178265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 23821810 - 23821886
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    |||| ||||||||| ||||| | ||| |||||||||||| || || |||||   ||||||||| |||||||||||||    
T  23821810 tgatgattcatggcatgggtgttcataattcatgatttgatgatgtgaaataagttgttgttgttggttttgtgaaa 23821886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 23830889 - 23830965
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    |||| ||||||||| ||||| | ||| |||||||||||| || || |||||   ||||||||| |||||||||||||    
T  23830889 tgatgattcatggcatgggtgttcataattcatgatttgatgatgtgaaataagttgttgttgttggttttgtgaaa 23830965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 145; Significance: 2e-76; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 77 - 233
Target Start/End: Original strand, 41507021 - 41507177
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaattatgacatgttgt 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||    
T  41507021 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggtttagtggaattggtgagttatgacatgttgt 41507120  T
Q  177 tgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatg 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41507121 tgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatg 41507177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 85 - 233
Target Start/End: Original strand, 24929018 - 24929165
Alignment:
Q  85 tcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaattatgacatgttgttgttgaaa 184  Q
    |||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24929018 tcattgcttgggtatgcat-attcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaattacgacatgttgttgttgaaa 24929116  T
Q  185 tatgatggaatgcatgatcataagttgtggttgtggttaattgttgatg 233  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  24929117 tatgatggaatgcatgatcataagttctggttgtggttaattgttgatg 24929165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 114 - 216
Target Start/End: Complemental strand, 2544957 - 2544855
Alignment:
Q  114 ttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaattatgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtg 213  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||    
T  2544957 ttgttgttgagaaatggactgttgttagtggttttgtgaaattggtgaattacgacatgttgttgttgaaatatgatggtatgcataatcataagttgtg 2544858  T
Q  214 gtt 216  Q
    |||    
T  2544857 gtt 2544855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 77 - 162
Target Start/End: Original strand, 24717074 - 24717159
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||| || ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  24717074 atgatgatacatggcttgggtttgcatgattcataatttgttgttgataaatggattgttgttggtggttttgtaaaattggtgaa 24717159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 41246701 - 41246614
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||| ||| |||||||| |||||||    
T  41246701 atgataattcatggcttgggtttgcatgattcatggtttgttgttgagaaatgaaatgttgttggtgttttggtgaaatttgtgaatt 41246614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 23218004 - 23217924
Alignment:
Q  153 aattggtgaattatgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatg 233  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||| ||||||||||    
T  23218004 aattgatgaattatgacatgttgttgttgaaatgtgatggaatgcatgattataagttgtagttgtggttgattgttgatg 23217924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 78 - 165
Target Start/End: Complemental strand, 23837240 - 23837153
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatta 165  Q
    |||| ||||||||||||||| | ||| ||||||||||||||| |||||||||  |||||| |||||||||||||||||||||||||||    
T  23837240 tgatgattcatggcttgggtattcataattcatgatttgttgatgagaaatgagttgttggtggtggttttgtgaaattggtgaatta 23837153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 20567203 - 20567290
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtg-aaattggtgaatt 164  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||   ||||||||||| ||| ||| |||||||||||||    
T  20567203 atgataattcatggcttgggtttgcatgattcatgatttg-tgttgagaaatgagatgttgttggtgttttggtgaaaattggtgaatt 20567290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 20567362 - 20567449
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtg-aaattggtgaatt 164  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||   ||||||||||| ||| ||| |||||||||||||    
T  20567362 atgataattcatggcttgggtttgcatgattcatgatttg-tgttgagaaatgagatgttgttggtgttttggtgaaaattggtgaatt 20567449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 20573396 - 20573483
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtg-aaattggtgaatt 164  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||   ||||||||||| ||| ||| |||||||||||||    
T  20573396 atgataattcatggcttgggtttgcatgattcatgatttg-tgttgagaaatgagatgttgttggtgttttggtgaaaattggtgaatt 20573483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 20573555 - 20573642
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtg-aaattggtgaatt 164  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||   ||||||||||| ||| ||| |||||||||||||    
T  20573555 atgataattcatggcttgggtttgcatgattcatgatttg-tgttgagaaatgagatgttgttggtgttttggtgaaaattggtgaatt 20573642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 87 - 143
Target Start/End: Complemental strand, 29759975 - 29759919
Alignment:
Q  87 atggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtg 143  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  29759975 atggcttgggtttgcatgattcatgatttgttgttgagaaatggtttgttgttggtg 29759919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 230
Target Start/End: Complemental strand, 22981318 - 22981241
Alignment:
Q  153 aattggtgaattatgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttg 230  Q
    ||||| |||||| |||||||||||||||||| | |||||||||||||||| ||||||||| ||||||||| |||||||    
T  22981318 aattgatgaattgtgacatgttgttgttgaattttgatggaatgcatgattataagttgttgttgtggttgattgttg 22981241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 77 - 165
Target Start/End: Original strand, 19993258 - 19993346
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatta 165  Q
    |||||||||||||||| |||||||||| |||| ||  ||||||||||||||||   ||||||||||| ||| |||||| ||||||||||    
T  19993258 atgataattcatggctagggtttgcataattcttggattgttgttgagaaatgagatgttgttggtgttttggtgaaaatggtgaatta 19993346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 22321574 - 22321654
Alignment:
Q  153 aattggtgaattatgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatg 233  Q
    |||||||||||||| ||||||| ||||| || | |||||||||||||||| ||| |||||| |||||||| ||||||||||    
T  22321574 aattggtgaattataacatgttattgttaaattgtgatggaatgcatgattatatgttgtgattgtggttgattgttgatg 22321654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 77 - 128
Target Start/End: Complemental strand, 21681045 - 21680994
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaat 128  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  21681045 atgataattcatggcttgggtatgcatgattcatgatttgttgtggagaaat 21680994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 20481644 - 20481571
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||||||||||||||| |||||||||||| ||||||||||| |||||   ||||||||| |||||| ||||||    
T  20481644 taattcatggcttgggtatgcatgattcataatttgttgttgtgaaataagttgttgttgttggtttggtgaaa 20481571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 164
Target Start/End: Original strand, 20648037 - 20648121
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatgatttgttgttgagaaatg-gattgttgttggtggttttgtgaaa-ttggtgaatt 164  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||| || |||| ||||||||| ||| |||||| ||||||||||    
T  20648037 taatccatggcttgggtttgcatgattcatgatttgttgtggagaagtgagatt-ttgttggtgttttggtgaaacttggtgaatt 20648121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 164
Target Start/End: Original strand, 20654113 - 20654197
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatgatttgttgttgagaaatg-gattgttgttggtggttttgtgaaa-ttggtgaatt 164  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||| || |||| ||||||||| ||| |||||| ||||||||||    
T  20654113 taattcattgcttgggtttgcatgattcatgatttgttgtggagaagtgagatt-ttgttggtgttttggtgaaacttggtgaatt 20654197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 21198362 - 21198439
Alignment:
Q  83 attcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtg 160  Q
    ||||||||||||||| | ||| ||||||||||||| | |||||||||  |||||||||||||||| || |||||||||    
T  21198362 attcatggcttgggtgttcataattcatgatttgtggatgagaaatgagttgttgttggtggtttggtaaaattggtg 21198439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 80 - 164
Target Start/End: Original strand, 39446973 - 39447057
Alignment:
Q  80 ataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgt-gaaattggtgaatt 164  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||   |||||||||| |||| ||  |||||||||||||    
T  39446973 ataattcatggcttgggtatgcatgatt-atgatttgttgttgagaaatgagatgttgttggtagtttggtaaaaattggtgaatt 39447057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 150
Target Start/End: Original strand, 23226281 - 23226353
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgt 150  Q
    |||| ||||||||||||||| | ||| |||||||||||| |  |||||||||||||||||||| |||||||||    
T  23226281 tgatgattcatggcttgggtattcataattcatgatttgattatgagaaatggattgttgttgttggttttgt 23226353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 129
Target Start/End: Complemental strand, 38533692 - 38533640
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatg 129  Q
    ||||||||||||||||||||| ||||| ||||||||||||||| |||||||||    
T  38533692 atgataattcatggcttgggtgtgcataattcatgatttgttgatgagaaatg 38533640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 164
Target Start/End: Original strand, 31194529 - 31194615
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    |||| |||||| ||||||||   ||||||||||||||||||| ||| |||||  ||||||||||||  ||||| |||||||||||||    
T  31194529 tgatgattcatagcttgggtgcacatgattcatgatttgttggtgaaaaatgagttgttgttggtgactttgtaaaattggtgaatt 31194615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 244
Target Start/End: Complemental strand, 43685662 - 43685584
Alignment:
Q  166 tgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatgtccatctcatt 244  Q
    |||||||||||||||||| ||||||||| || ||||| ||| ||| || |||||||| |||||||||||  ||||||||    
T  43685662 tgacatgttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatgttgatctcatt 43685584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 274482 - 274409
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||||||||||||||| ||||||| |||| ||||||||||| |||||   ||||||||| |||||| ||||||    
T  274482 taattcatggcttgggtatgcatgaatcataatttgttgttgtgaaataagttgttgttgttggtttggtgaaa 274409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 641367 - 641440
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||||||||||||||| ||||||| |||| ||||||||||| |||||   ||||||||| |||||| ||||||    
T  641367 taattcatggcttgggtatgcatgaatcataatttgttgttgtgaaataagttgttgttgttggtttggtgaaa 641440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 827173 - 827246
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||||||||||||||| ||||||| |||| ||||||||||| |||||   ||||||||| |||||| ||||||    
T  827173 taattcatggcttgggtatgcatgaatcataatttgttgttgtgaaataagttgttgttgttggtttggtgaaa 827246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 37611711 - 37611624
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatga-tttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    |||||||||||||||||||| |||||| |||||||| |||||| | |||||||| | ||||||||||| |||  ||||| |||||||||    
T  37611711 atgataattcatggcttggg-ttgcataattcatgattttgttatggagaaatgaaatgttgttggtgttttgatgaaaatggtgaatt 37611624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 244
Target Start/End: Original strand, 22907516 - 22907607
Alignment:
Q  153 aattggtgaattatgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatgtccatctcatt 244  Q
    ||||| |||| ||||| | |||||||||||| ||||||||| || ||||| ||| ||| || |||||||| |||||||||||  ||||||||    
T  22907516 aattgatgaaatatgataagttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatgttgatctcatt 22907607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 244
Target Start/End: Complemental strand, 5238203 - 5238125
Alignment:
Q  166 tgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatgtccatctcatt 244  Q
    |||||||||||||||||| ||||||||| || ||||| ||| ||| || |||||||| |||| ||||||  ||||||||    
T  5238203 tgacatgttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgatgatgttgatctcatt 5238125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 164
Target Start/End: Complemental strand, 17285309 - 17285223
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    |||| ||||||||||||||| | ||| |||||||| |||  | |||||||||  ||||||||||| ||||||  |||||||||||||    
T  17285309 tgatgattcatggcttgggtattcataattcatgacttgaggatgagaaatgagttgttgttggtagttttgcaaaattggtgaatt 17285223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 143
Target Start/End: Original strand, 22736046 - 22736108
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtg 143  Q
    ||||||||||||||||| ||||| |||||||| |||||| ||| |||||  ||||||||||||    
T  22736046 taattcatggcttgggtgtgcataattcatgaattgttgatgaaaaatgagttgttgttggtg 22736108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 244
Target Start/End: Original strand, 24661395 - 24661473
Alignment:
Q  166 tgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatgtccatctcatt 244  Q
    |||||||||||||||||| ||||||||| || ||||| ||| ||| || |||||||| |||| ||||||  ||||||||    
T  24661395 tgacatgttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgatgatgttgatctcatt 24661473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 15319414 - 15319455
Alignment:
Q  121 tgagaaatggattgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||||||  ||||||||||||||||||||||||||||||||    
T  15319414 tgagaaataaattgttgttggtggttttgtgaaattggtgaa 15319455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 15499783 - 15499824
Alignment:
Q  121 tgagaaatggattgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||||||  ||||||||||||||||||||||||||||||||    
T  15499783 tgagaaataaattgttgttggtggttttgtgaaattggtgaa 15499824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 16039097 - 16039170
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||| ||||||||| | |||||||||||| ||||||||||| |||||   ||||||||| |||||| ||||||    
T  16039097 taatttatggcttggatatgcatgattcataatttgttgttgtgaaataagttgttgttgttggtttggtgaaa 16039170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 22006513 - 22006554
Alignment:
Q  121 tgagaaatggattgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||||||  ||||||||||||||||||||||||||||||||    
T  22006513 tgagaaataaattgttgttggtggttttgtgaaattggtgaa 22006554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 22089049 - 22089090
Alignment:
Q  121 tgagaaatggattgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||||||  ||||||||||||||||||||||||||||||||    
T  22089049 tgagaaataaattgttgttggtggttttgtgaaattggtgaa 22089090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 155
Target Start/End: Complemental strand, 33528468 - 33528391
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaat 155  Q
    |||| ||||||||||||||| | ||| | |||||||||| || |||||||||| ||||||||| || |||||| ||||    
T  33528468 tgatgattcatggcttgggtgttcataaatcatgatttgatgatgagaaatgggttgttgttgttgattttgtaaaat 33528391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 146
Target Start/End: Complemental strand, 39115318 - 39115249
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggtt 146  Q
    ||||||||||||| |||| || |||||||||||| |||| ||||||||||||  |||||| ||| |||||    
T  39115318 atgataattcatgacttgtgtatgcatgattcataatttattgttgagaaataaattgttattgttggtt 39115249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 222
Target Start/End: Original strand, 21259637 - 21259685
Alignment:
Q  174 tgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggtt 222  Q
    |||||||||| | |||||||||||||||| ||||||||| |||||||||    
T  21259637 tgttgttgaattttgatggaatgcatgattataagttgttgttgtggtt 21259685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 162
Target Start/End: Original strand, 13662530 - 13662561
Alignment:
Q  131 attgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||||||||||||||||||||||||||||||    
T  13662530 attgttgttggtggttttgtgaaattggtgaa 13662561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 124
Target Start/End: Original strand, 22235007 - 22235054
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgag 124  Q
    |||||||||||||| |||||||||||| |||| || ||||||||||||    
T  22235007 atgataattcatggattgggtttgcataattcttggtttgttgttgag 22235054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 143
Target Start/End: Complemental strand, 25122579 - 25122513
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatga-tttgttgttgagaaatggattgttgttggtg 143  Q
    |||||||||||||||||||| ||||||||||||||| |||||| | ||||||||   |||||||||||    
T  25122579 atgataattcatggcttggg-ttgcatgattcatgattttgttatggagaaatgagatgttgttggtg 25122513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 162
Target Start/End: Original strand, 3431548 - 3431577
Alignment:
Q  133 tgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||||||||||||||||||||||||||||    
T  3431548 tgttgttggtggttttgtgaaattggtgaa 3431577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 155
Target Start/End: Complemental strand, 5854656 - 5854579
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaat 155  Q
    |||| ||||||||||||||| | ||| | |||||||||| || |||||| ||  ||||||||| ||||||||| ||||    
T  5854656 tgatgattcatggcttgggtgttcataaatcatgatttgatgatgagaattgagttgttgttgttggttttgtaaaat 5854579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 162
Target Start/End: Original strand, 13721195 - 13721224
Alignment:
Q  133 tgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||||||||||||||||||||||||||||    
T  13721195 tgttgttggtggttttgtgaaattggtgaa 13721224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 15969860 - 15969796
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtg 143  Q
    |||||||||||||||||||| ||||| |||||||| |||| |  ||||||||  ||||||||||||    
T  15969860 tgataattcatggcttgggtgtgcataattcatga-ttgtagaggagaaatgagttgttgttggtg 15969796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 150
Target Start/End: Complemental strand, 23149823 - 23149751
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgt 150  Q
    |||| |||||||||||| || | ||| |||||||||||| || ||| |||||  ||||||||| |||||||||    
T  23149823 tgatgattcatggcttgagtattcataattcatgatttgatgatgaaaaatgagttgttgttgttggttttgt 23149751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 141; Significance: 5e-74; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 77 - 233
Target Start/End: Complemental strand, 2031853 - 2031697
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaattatgacatgttgt 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||| ||||||||||||||    
T  2031853 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggtttaatggaattggtgagttatgacatgttgt 2031754  T
Q  177 tgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatg 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2031753 tgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatg 2031697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 131 - 233
Target Start/End: Original strand, 17471854 - 17471956
Alignment:
Q  131 attgttgttggtggttttgtgaaattggtgaattatgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttg 230  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  17471854 attgttgttggtgttttggtgaaattggtgaattatgacatgttgttgttgaaacatgatggaatgcatgatcataagttgtggttgtggttaattgttg 17471953  T
Q  231 atg 233  Q
    |||    
T  17471954 atg 17471956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 25004943 - 25004863
Alignment:
Q  153 aattggtgaattatgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatg 233  Q
    ||||||||| ||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  25004943 aattggtgatttatgacatgttgttgttggaatatgatgaaatgcatgattataagttgtggttgtggttaattgttgatg 25004863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 87 - 143
Target Start/End: Complemental strand, 11342717 - 11342661
Alignment:
Q  87 atggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtg 143  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11342717 atggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtg 11342661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 77 - 143
Target Start/End: Original strand, 1168408 - 1168474
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtg 143  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||    
T  1168408 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatgagatgttgttggtg 1168474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 21906763 - 21906675
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa-ttggtgaatt 164  Q
    ||||||||||||||||||||||||||||||||||| ||||| | ||||||||| | ||||||||||| ||  |||||| ||||||||||    
T  21906763 atgataattcatggcttgggtttgcatgattcatggtttgtggctgagaaatgaaatgttgttggtgtttgggtgaaacttggtgaatt 21906675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 77 - 155
Target Start/End: Complemental strand, 11584094 - 11584016
Alignment:
Q  77 atgataattcatggcttgggttt-gcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaat 155  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||  |||||||| |||||||||| ||||    
T  11584094 atgataattcatggcttgggttttgcatgattcatgatt-gttgttgagaaatgagttgttgttcgtggttttgtaaaat 11584016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 77 - 156
Target Start/End: Complemental strand, 21397132 - 21397053
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaatt 156  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||   |||| |||||| ||| ||||||||    
T  21397132 atgataattcatggcttgggtttgcatgattcatggtttgttattgagaaatgagatgttcttggtgttttggtgaaatt 21397053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 24475626 - 24475539
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    ||||||||||||||||||||||||||| |||| || |||||||||||||||||   ||||||||||| ||| |||||| || ||||||    
T  24475626 atgataattcatggcttgggtttgcataattcttggtttgttgttgagaaatgagatgttgttggtgttttggtgaaaatgatgaatt 24475539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 77 - 143
Target Start/End: Complemental strand, 19405580 - 19405514
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtg 143  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||   |||||||||||    
T  19405580 atgataattcatggcttgggtatgcatgattcatgatttgttgtggagaaatgagatgttgttggtg 19405514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 11337390 - 11337476
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtg-aaattggtgaatt 164  Q
    |||||||||||||||||| |||| |||||||||||| ||||||||||||||||   |||||||||| |||||||| |||||||||||||    
T  11337390 atgataattcatggcttgagtttacatgattcatga-ttgttgttgagaaatgagatgttgttggt-gttttgtgaaaattggtgaatt 11337476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 143
Target Start/End: Complemental strand, 23466500 - 23466434
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtg 143  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||| ||||   |||||||||||    
T  23466500 atgatagttcatggcttgggtatgcatgattcatgatttgttgttgaggaatgatatgttgttggtg 23466434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 143
Target Start/End: Complemental strand, 28261564 - 28261498
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtg 143  Q
    ||||||||||||||||||||||||||| |||| || |||||||||||||||||   |||||||||||    
T  28261564 atgataattcatggcttgggtttgcataattcttggtttgttgttgagaaatgagatgttgttggtg 28261498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 20712115 - 20712042
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||||||||||||||| |||||||||||| ||||||||||| |||||   ||||||||| |||||| ||||||    
T  20712115 taattcatggcttgggtatgcatgattcataatttgttgttgtgaaataagttgttgttgttggtttggtgaaa 20712042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 164
Target Start/End: Complemental strand, 16595550 - 16595463
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgt-gaaattggtgaatt 164  Q
    |||||||||||| ||||||| |||||||||||||| |||||| |||||||||   |||||||||| |||| ||  |||||||||||||    
T  16595550 tgataattcatgacttgggtgtgcatgattcatgaattgttgatgagaaatgagatgttgttggtagtttggtaaaaattggtgaatt 16595463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 21646943 - 21647030
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    |||||||||||||||||||||||| || |||  || |||||||||||||||||   ||||||||||| ||| |||||| || ||||||    
T  21646943 atgataattcatggcttgggtttgtataattattggtttgttgttgagaaatgagatgttgttggtgttttggtgaaaatgatgaatt 21647030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 164
Target Start/End: Complemental strand, 4865298 - 4865218
Alignment:
Q  84 ttcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    |||||||||||||||||||| |||| ||| |||||||||||| |||   ||||||||||| |||  ||||| |||||||||    
T  4865298 ttcatggcttgggtttgcataattcttgaattgttgttgagagatgaggtgttgttggtgttttgatgaaaatggtgaatt 4865218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 116
Target Start/End: Original strand, 24183333 - 24183372
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttg 116  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  24183333 atgataattaatggcttgggtttgcatgattcatgatttg 24183372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 244
Target Start/End: Complemental strand, 20623085 - 20623007
Alignment:
Q  166 tgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatgtccatctcatt 244  Q
    |||||||||||||||||| ||||||||| || ||||| ||| ||| || |||||||| |||| ||||||  ||||||||    
T  20623085 tgacatgttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgatgatgttgatctcatt 20623007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 21204965 - 21204891
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatga-tttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||||||||||||||| |||||||||||| | |||||||||| |||||   ||||||||| |||||| ||||||    
T  21204965 taattcatggcttgggtatgcatgattcataattttgttgttgtgaaataagttgttgttgttggtttggtgaaa 21204891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 244
Target Start/End: Original strand, 21233675 - 21233753
Alignment:
Q  166 tgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatgtccatctcatt 244  Q
    |||||||||||||||||| ||||||||| || ||||| ||| ||| || |||||||| |||| ||||||  ||||||||    
T  21233675 tgacatgttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgatgatgttgatctcatt 21233753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 1219775 - 1219816
Alignment:
Q  121 tgagaaatggattgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||||||  ||||||||||||||||||||||||||||||||    
T  1219775 tgagaaataaattgttgttggtggttttgtgaaattggtgaa 1219816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 21650734 - 21650661
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    |||||||||| |||||| |||||||||||| ||||||||| | |||||   ||||||||| |||||| ||||||    
T  21650734 taattcatggtttgggtatgcatgattcataatttgttgtggtgaaataagttgttgttgttggtttggtgaaa 21650661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 22883339 - 22883380
Alignment:
Q  121 tgagaaatggattgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||||||  ||||||||||||||||||||||||||||||||    
T  22883339 tgagaaataaattgttgttggtggttttgtgaaattggtgaa 22883380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 154
Target Start/End: Complemental strand, 23493962 - 23493885
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||| ||||||||||||||| | ||| |||||||||||| || ||||||||   ||||||||| |||||| ||||||    
T  23493962 atgatgattcatggcttgggtgttcataattcatgatttgatgatgagaaataagttgttgttgttggtttggtgaaa 23493885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 19862251 - 19862183
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggtt 146  Q
    |||| ||||||| ||||||| | ||| |||||||||||| || |||||||||  |||||||||||||||    
T  19862251 tgatgattcatgacttgggtgttcataattcatgatttgatgatgagaaatgagttgttgttggtggtt 19862183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 162
Target Start/End: Original strand, 9730650 - 9730679
Alignment:
Q  133 tgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||||||||||||||||||||||||||||    
T  9730650 tgttgttggtggttttgtgaaattggtgaa 9730679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 162
Target Start/End: Complemental strand, 23514550 - 23514521
Alignment:
Q  133 tgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||||||||||||||||||||||||||||    
T  23514550 tgttgttggtggttttgtgaaattggtgaa 23514521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 143
Target Start/End: Original strand, 32966352 - 32966417
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtg 143  Q
    ||||||||||||||||| |  ||||| |||||| ||| |||| |||||||||  ||||||||||||    
T  32966352 tgataattcatggcttgagcgtgcataattcataattggttgatgagaaatgagttgttgttggtg 32966417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 150
Target Start/End: Complemental strand, 6456666 - 6456594
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgt 150  Q
    |||| ||||||||||||||| | ||||| |||||||||| || ||||||||   ||||||||| || ||||||    
T  6456666 tgatgattcatggcttgggtgttcatgaatcatgatttgatgatgagaaataagttgttgttgttgtttttgt 6456594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 150
Target Start/End: Complemental strand, 29918007 - 29917935
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgt 150  Q
    |||| ||||||||||||||| | ||| | |||||||||| |||||||||||  ||| |||| | |||||||||    
T  29918007 tgatgattcatggcttgggtgttcataaatcatgatttgatgttgagaaataaattattgtcgttggttttgt 29917935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1734 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold1734
Description:

Target: scaffold1734; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 97 - 233
Target Start/End: Complemental strand, 1422 - 1286
Alignment:
Q  97 tttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaattatgacatgttgttgttgaaatatgatggaatg 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1422 tttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaattatgacatgttgttgttgaaatatgatggaatg 1323  T
Q  197 catgatcataagttgtggttgtggttaattgttgatg 233  Q
    |||||||||||||||||||||||||||||||||||||    
T  1322 catgatcataagttgtggttgtggttaattgttgatg 1286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 77 - 233
Target Start/End: Original strand, 24401 - 24557
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaattatgacatgttgt 176  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||| ||||||||||    
T  24401 atgataattcatgtcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggtttaaagaaattggtgaattaagacatgttgt 24500  T
Q  177 tgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatg 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24501 tgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatg 24557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 137; Significance: 1e-71; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 77 - 233
Target Start/End: Complemental strand, 34395300 - 34395144
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaattatgacatgttgt 176  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34395300 atgataattcatggcttgagtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaattacgacatgttgt 34395201  T
Q  177 tgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatg 233  Q
    |||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||    
T  34395200 tgttgaaacatgatggaatgcttgatcataagttgtgattgtggttaattgttgatg 34395144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 5682753 - 5682824
Alignment:
Q  91 cttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5682753 cttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaa 5682824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 86 - 162
Target Start/End: Original strand, 25119428 - 25119505
Alignment:
Q  86 catggcttgggtttgcatgattcatgattt-gttgttgagaaatggattgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  25119428 catggcttgggtttgcatgattcataattttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaa 25119505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 16732212 - 16732124
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa-ttggtgaatt 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||| ||| |||||| ||||||||||    
T  16732212 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatgagatgttgttggtgttttggtgaaacttggtgaatt 16732124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 87 - 154
Target Start/End: Complemental strand, 14951795 - 14951728
Alignment:
Q  87 atggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  14951795 atggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtgttttggtgaaa 14951728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 44055958 - 44055871
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||   ||||||||||| ||| |||||||| |||||||    
T  44055958 atgataattcatggcttgggtttgcatgattcatggtttgttgttgagaaatgagatgttgttggtgttttggtgaaatttgtgaatt 44055871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 23270138 - 23270225
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||||||   ||||||||||| ||| |||||| |||||||||    
T  23270138 atgataattcatggcttgggtttgcatgattcatggtttgtggttgagaaatgagatgttgttggtgttttcgtgaaaatggtgaatt 23270225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 34177767 - 34177830
Alignment:
Q  153 aattggtgaattatgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggtt 216  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  34177767 aattggtgaattatgacttgttgttgttgaaatatgatggaatgcatgattataagttgtggtt 34177830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 129
Target Start/End: Original strand, 55376801 - 55376853
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatg 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55376801 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatg 55376853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 162 - 233
Target Start/End: Complemental strand, 19559481 - 19559410
Alignment:
Q  162 attatgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatg 233  Q
    |||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||  ||||||||||    
T  19559481 attatgacatgttgttgttgaattgtgatggaatgcatgattataagttgtggttgtggtagattgttgatg 19559410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 164
Target Start/End: Original strand, 18494540 - 18494620
Alignment:
Q  85 tcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtg-aaattggtgaatt 164  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  18494540 tcatggcttgggtatgcatgattcatgacttgttgttgagaaatgagatgttgttggtggtttggtgaaaattggtgaatt 18494620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 154
Target Start/End: Original strand, 53704937 - 53705014
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||||||||||||||||||||||||| |||| || |||||||||||||||||   ||||||||||| ||| ||||||    
T  53704937 atgataattcatggcttgggtttgcataattcttggtttgttgttgagaaatgagatgttgttggtgttttggtgaaa 53705014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 165
Target Start/End: Complemental strand, 14901274 - 14901187
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatta 165  Q
    |||| ||||||| | ||||| ||||| |||||||| ||| || |||||||||| ||||||||||||||||||| |||||||| |||||    
T  14901274 tgatgattcatgacatgggtgtgcataattcatgaattgatgatgagaaatgggttgttgttggtggttttgtaaaattggtaaatta 14901187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 53907900 - 53907987
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    ||||||||||||||||||||||||||| |||| || |||||||||||||||||   ||||||||||| |||  ||||| || ||||||    
T  53907900 atgataattcatggcttgggtttgcataattcttggtttgttgttgagaaatgagatgttgttggtgttttgatgaaaatgatgaatt 53907987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 164
Target Start/End: Original strand, 47535251 - 47535337
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    |||| |||||||||||| || | ||| ||||||||||||||  |||||||||  ||||||||| ||||||||| |||||||||||||    
T  47535251 tgatgattcatggcttgagtgttcataattcatgatttgttaatgagaaatgagttgttgttgatggttttgtaaaattggtgaatt 47535337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 129
Target Start/End: Original strand, 13809714 - 13809766
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatg 129  Q
    ||||||||||||||||||| | |||||||||||||||| ||||||||||||||    
T  13809714 atgataattcatggcttggatatgcatgattcatgattggttgttgagaaatg 13809766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 21959667 - 21959755
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa-ttggtgaatt 164  Q
    |||||||||||||||||||| |||||||||||||  ||||| ||||||||||  | ||||||||||| ||  |||||| ||||||||||    
T  21959667 atgataattcatggcttgggcttgcatgattcatagtttgtggttgagaaattaaatgttgttggtgtttgagtgaaacttggtgaatt 21959755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 129
Target Start/End: Complemental strand, 44346870 - 44346818
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatg 129  Q
    ||||||||||||||||||||||||||| |||| || |||||||||||||||||    
T  44346870 atgataattcatggcttgggtttgcataattcttggtttgttgttgagaaatg 44346818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 85 - 160
Target Start/End: Original strand, 41166158 - 41166233
Alignment:
Q  85 tcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtg 160  Q
    ||||||||||||| | ||| | | ||||||||||| |||||||||  ||||||| |||||||||||||||||||||    
T  41166158 tcatggcttgggtattcataacttatgatttgttgatgagaaatgagttgttgtgggtggttttgtgaaattggtg 41166233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 142
Target Start/End: Original strand, 12837408 - 12837468
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggt 142  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||   |||||||||||    
T  12837408 taattcatggcttgggtatgcatgattcatgatttgttg-tgagaaataagttgttgttggt 12837468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 143
Target Start/End: Original strand, 37957230 - 37957295
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtg 143  Q
    |||||||||| ||||||||| ||||| ||||||||||||||| ||| |||||  ||||||||||||    
T  37957230 tgataattcacggcttgggtgtgcataattcatgatttgttgatgataaatgagttgttgttggtg 37957295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 79 - 117
Target Start/End: Original strand, 45459061 - 45459099
Alignment:
Q  79 gataattcatggcttgggtttgcatgattcatgatttgt 117  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  45459061 gataatccatggcttgggtttgcatgattcatgatttgt 45459099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 162
Target Start/End: Complemental strand, 18168971 - 18168930
Alignment:
Q  121 tgagaaatggattgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||||||  ||||||||||||||||||||||||||||||||    
T  18168971 tgagaaataaattgttgttggtggttttgtgaaattggtgaa 18168930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 143
Target Start/End: Original strand, 19821981 - 19822046
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtg 143  Q
    |||| ||||||||||||||| | ||| ||||||||||||||| |||||||||  ||||| ||||||    
T  19821981 tgatgattcatggcttgggtattcataattcatgatttgttgatgagaaatgagttgtttttggtg 19822046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 26680155 - 26680070
Alignment:
Q  159 tgaattatgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatgtccatctcatt 244  Q
    |||| ||||| | |||||||||||| ||||||||| || ||||| ||| ||| || |||||||| |||||||||||  ||||||||    
T  26680155 tgaaatatgataagttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatgttgatctcatt 26680070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 129
Target Start/End: Complemental strand, 27961014 - 27960963
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatg 129  Q
    |||||||||||||| |||||| ||||||||| ||||||| |||||||||||||    
T  27961014 atgataattcatggtttgggtatgcatgatt-atgatttattgttgagaaatg 27960963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 167
Target Start/End: Original strand, 15272528 - 15272615
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatga-tttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaattatg 167  Q
    ||||||||||||||||| |||||||||||| | |||||||||| |||||   ||||||||| | |||| |||||| |||  |||||||    
T  15272528 taattcatggcttgggtatgcatgattcataattttgttgttgtgaaataagttgttgttgttagtttggtgaaaatggataattatg 15272615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 128
Target Start/End: Original strand, 30232704 - 30232751
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatgatttgttgttgagaaat 128  Q
    ||||||||||||||||| ||||| |||||| ||||||||||| |||||    
T  30232704 taattcatggcttgggtatgcattattcataatttgttgttgtgaaat 30232751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 115
Target Start/End: Original strand, 820117 - 820154
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgattt 115  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  820117 atgataattcatggcttggg-ttgcatgattcatgattt 820154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 183
Target Start/End: Complemental strand, 9795344 - 9795314
Alignment:
Q  153 aattggtgaattatgacatgttgttgttgaa 183  Q
    |||||||||||||||||||||||||||||||    
T  9795344 aattggtgaattatgacatgttgttgttgaa 9795314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 155
Target Start/End: Original strand, 7964916 - 7964993
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaat 155  Q
    |||| |||||||||||| || | ||| | |||||||||| || |||||||||  ||||||||| ||||||||| ||||    
T  7964916 tgatgattcatggcttgagtgttcataaatcatgatttgatgatgagaaatgagttgttgttgttggttttgtaaaat 7964993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 154
Target Start/End: Complemental strand, 15044871 - 15044794
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||| ||||||||||||||| | ||| | |||||||||| || ||||||||  |||||||||| || ||| ||||||    
T  15044871 atgatgattcatggcttgggtgttcataaatcatgatttgatgatgagaaataaattgttgttgttgctttggtgaaa 15044794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 154
Target Start/End: Original strand, 15109553 - 15109630
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||| ||||||||||||||| | ||| | |||||||||| || ||||||||  |||||||||| || ||| ||||||    
T  15109553 atgatgattcatggcttgggtgttcataaatcatgatttgatgatgagaaataaattgttgttgttgctttggtgaaa 15109630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 30457946 - 30457859
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatga-tttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    |||||||||||||||||||| |||||| |||||| | |||||| | ||||||||   ||||||||||| |||  ||||| |||||||||    
T  30457946 atgataattcatggcttggg-ttgcataattcattattttgttatagagaaatgagatgttgttggtgttttgatgaaaatggtgaatt 30457859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 133; Significance: 3e-69; HSPs: 2)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 77 - 233
Target Start/End: Complemental strand, 3562 - 3406
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaattatgacatgttgt 176  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||| ||| ||||||||| ||||||||||||||    
T  3562 atgataattcatggcttgggtttgcatgtttcattatttgttgttgagaaatggaatgttgttggtggtttagtggaattggtgagttatgacatgttgt 3463  T
Q  177 tgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatg 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3462 tgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatg 3406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 77 - 140
Target Start/End: Complemental strand, 64 - 1
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttg 140  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  64 atgataattcatggcttgggtttgcatgtttcattatttgttgttgagaaatggattgttgttg 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 77 - 233
Target Start/End: Original strand, 253193 - 253349
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaattatgacatgttgt 176  Q
    ||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  253193 atgataattcaaggcttgggtttgcatgattcatgatttcttgatgagaaatggattgttgttggtggttttgtgaaattggtgaattatgacatgttgt 253292  T
Q  177 tgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatg 233  Q
    |||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||    
T  253293 tgttgaaatatgatggaatgcatgattataagttgtgggtttggttaattgttgatg 253349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 122; Significance: 1e-62; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 92 - 233
Target Start/End: Complemental strand, 13838923 - 13838783
Alignment:
Q  92 ttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaattatgacatgttgttgttgaaatatgatg 191  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  13838923 ttgggtatgcat-attcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaattacgacatgttgttgttgaaatatgatg 13838825  T
Q  192 gaatgcatgatcataagttgtggttgtggttaattgttgatg 233  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  13838824 gaatgaatgatcataagttgtggttgtggttaattgttgatg 13838783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 146 - 233
Target Start/End: Original strand, 15468630 - 15468717
Alignment:
Q  146 tttgtgaaattggtgaattatgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatg 233  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15468630 tttgtgaaattggtgaattatgacatgttgttgttgaaacatgatggaatgtatgatcataagttgtggttgtggttaattgttgatg 15468717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 146 - 233
Target Start/End: Complemental strand, 22275175 - 22275088
Alignment:
Q  146 tttgtgaaattggtgaattatgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatg 233  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22275175 tttgtgaaattagtgaattatgacatgttgttgttgaaacatgatggaatgcatgatcataagttgtggttgtggttaattgttgatg 22275088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 77 - 162
Target Start/End: Original strand, 17956196 - 17956281
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17956196 atgatgatacatgacttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaa 17956281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 48421704 - 48421624
Alignment:
Q  153 aattggtgaattatgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatg 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  48421704 aattggtgaattatgacatgttgttgttgaaatatgatggaatgcatgattataaattgtggttgtggttaattgttgatg 48421624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 87 - 154
Target Start/End: Complemental strand, 30152975 - 30152908
Alignment:
Q  87 atggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  30152975 atggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtgttttggtgaaa 30152908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 77 - 155
Target Start/End: Complemental strand, 33341924 - 33341847
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaat 155  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||| ||||    
T  33341924 atgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgttggtggttttgtaaaat 33341847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 77 - 154
Target Start/End: Complemental strand, 14295481 - 14295404
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||| ||| ||||||    
T  14295481 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatgagatgttgttggtgttttggtgaaa 14295404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 18970048 - 18969968
Alignment:
Q  153 aattggtgaattatgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatg 233  Q
    ||||| ||||||||||||||||||||||||| | |||||||| ||||||| ||||||||||||||||||| ||||||||||    
T  18970048 aattgatgaattatgacatgttgttgttgaattctgatggaaagcatgattataagttgtggttgtggttgattgttgatg 18969968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 77 - 155
Target Start/End: Complemental strand, 7854025 - 7853948
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaat 155  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||  ||||||||||||||||||| ||||    
T  7854025 atgataattcatggcttgggtttgcatgaatcatga-ttgttgttgagaaatgagttgttgttggtggttttgtaaaat 7853948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 77 - 155
Target Start/End: Complemental strand, 19946741 - 19946664
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaat 155  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||| ||||    
T  19946741 atgataatccatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgttggtggttttgtaaaat 19946664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 39656467 - 39656390
Alignment:
Q  153 aattggtgaattatgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatg 233  Q
    |||||||||||||||||||||||||    ||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  39656467 aattggtgaattatgacatgttgttc---aaatatgatggcatgcatgattataagttgtggttgtggttaattgttgatg 39656390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 77 - 154
Target Start/End: Complemental strand, 45581674 - 45581597
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||  |||||||||| |||||| ||||||    
T  45581674 atgataattcatggcttgggtatgcatgattcataatttgttgttgagaaataaattgttgttgttggtttggtgaaa 45581597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 22144476 - 22144563
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    |||||||| |||||||||||||||||||||||||| ||||| |||||||||||   ||||||||||| ||| |||||||| |||||||    
T  22144476 atgataatacatggcttgggtttgcatgattcatggtttgtggttgagaaatgagatgttgttggtgttttggtgaaatttgtgaatt 22144563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 222
Target Start/End: Original strand, 14177158 - 14177227
Alignment:
Q  153 aattggtgaattatgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggtt 222  Q
    ||||| |||||||||||||||||| |||||| | |||||||||||||||| |||||||||||||||||||    
T  14177158 aattgatgaattatgacatgttgtggttgaattgtgatggaatgcatgattataagttgtggttgtggtt 14177227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 77 - 154
Target Start/End: Complemental strand, 14298464 - 14298388
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||   ||||||||||| ||| ||||||    
T  14298464 atgataattcatggcttgggtttgcatgattcatgatttg-tgttgagaaatgagatgttgttggtgttttggtgaaa 14298388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 77 - 154
Target Start/End: Complemental strand, 14304091 - 14304015
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||   ||||||||||| ||| ||||||    
T  14304091 atgataattcatggcttgggtttgcatgattcatgatttg-tgttgagaaatgagatgttgttggtgttttggtgaaa 14304015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 77 - 154
Target Start/End: Complemental strand, 28558249 - 28558172
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||  |||||||||| | |||| ||||||    
T  28558249 atgataattcatggcttgggtatgcatgattcataatttgttgttgagaaataaattgttgttgtttgtttggtgaaa 28558172  T

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Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 77 - 154
Target Start/End: Original strand, 54038336 - 54038413
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||||||||||||||||||| |||||||||||| |||||||||| ||||||  |||||||||| |||||| ||||||    
T  54038336 atgataattcatggcttgggtatgcatgattcataatttgttgttaagaaataaattgttgttgttggtttggtgaaa 54038413  T

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Target: chr3; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 35123739 - 35123652
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtg-aaattggtgaatt 164  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||   ||||||||||| ||| ||| |||||||||||||    
T  35123739 atgataattcatggtttgggtttgcatgattcatgatttg-tgttgagaaatgagatgttgttggtgttttggtgaaaattggtgaatt 35123652  T

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Target: chr3; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 55441053 - 55441141
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtg-aaattggtgaatt 164  Q
    ||||||||||||| ||||||| ||||| ||||||||||| |||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  55441053 atgataattcatgacttgggtatgcataattcatgattttttgttgagaaatgagatgttgttggtggtttggtgaaaattggtgaatt 55441141  T

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Target: chr3; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 13817558 - 13817471
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    ||||||||||||||||||||||||||| |||| || |||||||||||||||||   ||||||||||| |||  ||||| |||||||||    
T  13817558 atgataattcatggcttgggtttgcataattcttggtttgttgttgagaaatgagatgttgttggtgttttgatgaaaatggtgaatt 13817471  T

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Target: chr3; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 11329165 - 11329235
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttt 147  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||   |||||||||| ||||    
T  11329165 atgataattcatggcttgggtatgcatgattcatgatttgttgatgagaaatgagatgttgttggtagttt 11329235  T

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Target: chr3; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 147
Target Start/End: Original strand, 14528220 - 14528286
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttt 147  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||   |||||||||||||||    
T  14528220 taattcatggcttgggtatgaatgattcatgatttgttgttgagaaatgagatgttgttggtggttt 14528286  T

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Target: chr3; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 17139551 - 17139481
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttt 147  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||||   |||||||||| ||||    
T  17139551 atgataattcatggcttgggtatgcatgattcatgatttgttgttgcgaaatgagatgttgttggtagttt 17139481  T

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Target: chr3; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 77 - 155
Target Start/End: Original strand, 54685513 - 54685590
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaat 155  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||  ||| ||||| ||||||||| ||||    
T  54685513 atgataattcatggcttggatttgcatgattcatga-ttgttgttgagaaatgagttgctgttgctggttttgtaaaat 54685590  T

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Target: chr3; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 154
Target Start/End: Original strand, 17523094 - 17523170
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||||   ||||||||||| ||| ||||||    
T  17523094 atgataattcatggcttgggtttgcatgatttatgatttg-tgttgagaaatgagatgttgttggtgttttggtgaaa 17523170  T

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Target: chr3; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 50112255 - 50112342
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    |||||||||||||||||| |||||||||||||||| |||||| ||||||||||   || | |||||| ||| |||||||| |||||||    
T  50112255 atgataattcatggcttgagtttgcatgattcatggtttgtttttgagaaatgagatgctattggtgttttggtgaaatttgtgaatt 50112342  T

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Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 164
Target Start/End: Complemental strand, 17204742 - 17204656
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    |||| ||||||||||||||| |  || ||||||||||||||| |||||||||  |||||||| |||||||||| || ||||||||||    
T  17204742 tgatgattcatggcttgggtgtttataattcatgatttgttgatgagaaatgagttgttgttagtggttttgtaaagttggtgaatt 17204656  T

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Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 14059417 - 14059482
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggt 142  Q
    ||||||||||||||||||||||||||| ||||||||| ||||| |||||||||   ||||||||||    
T  14059417 atgataattcatggcttgggtttgcataattcatgatctgttgatgagaaatgagatgttgttggt 14059482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 154
Target Start/End: Complemental strand, 14301108 - 14301031
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||| ||||||| ||| ||||||||||||||||| |||||||||||||||||   ||||||||||| ||| ||||||    
T  14301108 atgattattcatgtctttggtttgcatgattcatgttttgttgttgagaaatgagatgttgttggtgttttggtgaaa 14301031  T

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Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 16996263 - 16996349
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    |||||||||||||||||| |||||||| |||| || |||||||||||||||||  ||| |||||||| |||  ||||| |||||||||    
T  16996263 atgataattcatggcttgagtttgcataattcttggtttgttgttgagaaatgagttg-tgttggtgttttgatgaaaatggtgaatt 16996349  T

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Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 147
Target Start/End: Original strand, 12560444 - 12560510
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttt 147  Q
    |||||| |||||||||| |||||||||||||||||| ||||||||||||   |||||||||| ||||    
T  12560444 taattcctggcttgggtatgcatgattcatgatttgatgttgagaaatgagatgttgttggtagttt 12560510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 23492412 - 23492339
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||||||||||||||| ||||||||||||  |||||||||| |||||   ||||||||| |||||| ||||||    
T  23492412 taattcatggcttgggtatgcatgattcatagtttgttgttgtgaaataagttgttgttgttggtttggtgaaa 23492339  T

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Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 38167953 - 38167880
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||||||||||||||| |||||||||||| ||||||||||| |||||   ||||||||| || ||| ||||||    
T  38167953 taattcatggcttgggtatgcatgattcataatttgttgttgtgaaataagttgttgttgttgttttggtgaaa 38167880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 154
Target Start/End: Complemental strand, 54424055 - 54423979
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||| ||||||||||||||| ||||||||||||||||||||  ||||||||   ||||||||| |||||| ||||||    
T  54424055 atgattattcatggcttgggtatgcatgattcatgatttgtt-atgagaaataagttgttgttgttggtttggtgaaa 54423979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 165
Target Start/End: Original strand, 317712 - 317800
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatta 165  Q
    |||||||||||||||||| ||||| || |||| || |||||||| ||||||||   ||||||||||| |||  ||||| ||||||||||    
T  317712 atgataattcatggcttgagtttgtataattcttggtttgttgtggagaaatgagatgttgttggtgttttgatgaaaatggtgaatta 317800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 129
Target Start/End: Original strand, 16182149 - 16182201
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatg 129  Q
    ||||||||||||||||||||||||||| |||| ||  ||||||||||||||||    
T  16182149 atgataattcatggcttgggtttgcataattcttggattgttgttgagaaatg 16182201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 164
Target Start/End: Complemental strand, 17191583 - 17191500
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    |||| |||||||||||| || | ||| ||||||||||||||| |||||||||    ||||||||||||||||| || ||||||||||    
T  17191583 tgatgattcatggcttgagtgttcataattcatgatttgttgatgagaaatg---agttgttggtggttttgtaaagttggtgaatt 17191500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 47784957 - 47785017
Alignment:
Q  83 attcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtg 143  Q
    ||||||||||||||| | ||| ||||||||||||||| |||||||||  ||||||||||||    
T  47784957 attcatggcttgggtgttcataattcatgatttgttggtgagaaatgagttgttgttggtg 47785017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 128
Target Start/End: Complemental strand, 17100692 - 17100645
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatgatttgttgttgagaaat 128  Q
    ||||||||||||||||| |||||||||||| ||||||||||| |||||    
T  17100692 taattcatggcttgggtatgcatgattcataatttgttgttgtgaaat 17100645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 128
Target Start/End: Complemental strand, 17101377 - 17101330
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatgatttgttgttgagaaat 128  Q
    ||||||||||||||||| |||||||||||| ||||||||||| |||||    
T  17101377 taattcatggcttgggtatgcatgattcataatttgttgttgtgaaat 17101330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 143
Target Start/End: Original strand, 17960520 - 17960583
Alignment:
Q  80 ataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtg 143  Q
    |||||||||| ||||||| ||||| ||||||||||||||| || ||||||  ||||||||||||    
T  17960520 ataattcatgacttgggtgtgcataattcatgatttgttgatgggaaatgagttgttgttggtg 17960583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 129
Target Start/End: Original strand, 53898660 - 53898710
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatg 129  Q
    ||||||||||||||||||||||||| ||||||||||||  ||||||||||||    
T  53898660 tgataattcatggcttgggtttgcaagattcatgattt-atgttgagaaatg 53898710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 140
Target Start/End: Original strand, 3576643 - 3576705
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttg 140  Q
    |||| ||||||||||||||| | ||| ||||||||||||||| |||||||||  |||||||||    
T  3576643 tgatgattcatggcttgggtgttcataattcatgatttgttgatgagaaatgagttgttgttg 3576705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 3992589 - 3992515
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatga-tttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||||||||||||||| |||||||||||| | |||||||||| |||||   ||||||||| |||||| ||||||    
T  3992589 taattcatggcttgggtatgcatgattcataattttgttgttgtgaaataagttgttgttgttggtttggtgaaa 3992515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 162
Target Start/End: Complemental strand, 49232437 - 49232396
Alignment:
Q  121 tgagaaatggattgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||||||  ||||||||||||||||||||||||||||||||    
T  49232437 tgagaaataaattgttgttggtggttttgtgaaattggtgaa 49232396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 164
Target Start/End: Original strand, 6146953 - 6147036
Alignment:
Q  80 ataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    |||||||||||||||||||| |||||||||||||||  | | ||||||||   ||||||||||| |||  ||||| |||||||||    
T  6146953 ataattcatggcttgggttt-catgattcatgattttgtatggagaaatgagatgttgttggtgttttgatgaaaatggtgaatt 6147036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 150
Target Start/End: Complemental strand, 12953006 - 12952934
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgt 150  Q
    |||| ||||||||||||||| | ||| | |||||||||| || |||||||||  ||||||||| |||||||||    
T  12953006 tgatgattcatggcttgggtgttcataaatcatgatttgatgatgagaaatgagttgttgttgttggttttgt 12952934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 121
Target Start/End: Original strand, 19261047 - 19261087
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatgatttgttgtt 121  Q
    ||||||||||||||||| |||||||||||| ||||||||||    
T  19261047 taattcatggcttgggtatgcatgattcataatttgttgtt 19261087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 19570892 - 19570978
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    |||||||||||||||||| |||||||| |||| ||  ||||||||||||||||   ||||||||||| |||  ||||| || ||||||    
T  19570892 atgataattcatggcttgagtttgcataattcttg-gttgttgttgagaaatgagatgttgttggtgttttgatgaaaatgatgaatt 19570978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 167
Target Start/End: Complemental strand, 53771080 - 53770993
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatga-tttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaattatg 167  Q
    ||||||||||||||||| |||||||||||| | |||||||||| |||||   ||||||||| | |||| |||||| |||  |||||||    
T  53771080 taattcatggcttgggtatgcatgattcataattttgttgttgtgaaataagttgttgttgttagtttggtgaaaatggataattatg 53770993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 155
Target Start/End: Complemental strand, 1990845 - 1990767
Alignment:
Q  78 tgataattcatggcttgggtt-tgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaat 155  Q
    |||| ||||||||||||| || | ||| | |||||||||| || |||||||||  ||||||||||||||||||| ||||    
T  1990845 tgatgattcatggcttggtttgttcataaatcatgatttgatgatgagaaatgagttgttgttggtggttttgtaaaat 1990767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 115
Target Start/End: Original strand, 12349934 - 12349971
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgattt 115  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  12349934 atgataattcatggcttggg-ttgcatgattcatgattt 12349971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 143
Target Start/End: Original strand, 38811212 - 38811278
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtg 143  Q
    ||||| ||||||||||||||| ||||| ||||||| |||| || | |||||||  ||||||||||||    
T  38811212 atgatgattcatggcttgggtgtgcataattcatgttttgatgatcagaaatgagttgttgttggtg 38811278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 154
Target Start/End: Original strand, 12488930 - 12489007
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||||||||||||||||||| | ||| |||||||||||  || || |||||   ||||||||| |||||| ||||||    
T  12488930 atgataattcatggcttgggtgttcataattcatgatttaatgatgggaaataagttgttgttgttggtttggtgaaa 12489007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 162
Target Start/End: Original strand, 16934241 - 16934270
Alignment:
Q  133 tgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||||||||||||||||||||||||||||    
T  16934241 tgttgttggtggttttgtgaaattggtgaa 16934270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 8631833 - 8631801
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattca 109  Q
    ||||| |||||||||||||||||||||||||||    
T  8631833 atgatcattcatggcttgggtttgcatgattca 8631801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 150
Target Start/End: Original strand, 9590959 - 9591031
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgt 150  Q
    |||| ||||||| ||||||| | |||  ||||||||||| || |||||||||  ||||||||| |||||||||    
T  9590959 tgatgattcatgacttgggtgttcatagttcatgatttgatgatgagaaatgagttgttgttgttggttttgt 9591031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 153
Target Start/End: Original strand, 11196444 - 11196488
Alignment:
Q  109 atgatttgttgttgagaaatggattgttgttggtggttttgtgaa 153  Q
    |||||||||||||||||||||   ||||||||||||||| |||||    
T  11196444 atgatttgttgttgagaaatgagatgttgttggtggtttggtgaa 11196488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 165
Target Start/End: Complemental strand, 15876111 - 15876023
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatta 165  Q
    ||||| ||||||||||| ||| | ||| ||||||||||||| | |||||||||  ||| ||||||| |||| || ||| | ||||||||    
T  15876111 atgatgattcatggcttaggtattcataattcatgatttgtggatgagaaatgagttggtgttggtagtttggtaaaaattgtgaatta 15876023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 244
Target Start/End: Original strand, 16744436 - 16744508
Alignment:
Q  172 gttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatgtccatctcatt 244  Q
    |||||||||||| ||||||||| || ||||| ||| ||| || |||||||| || ||||||||  ||||||||    
T  16744436 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgatagttgatgttgatctcatt 16744508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 162
Target Start/End: Complemental strand, 16821127 - 16821099
Alignment:
Q  134 gttgttggtggttttgtgaaattggtgaa 162  Q
    |||||||||||||||||||||||||||||    
T  16821127 gttgttggtggttttgtgaaattggtgaa 16821099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 129
Target Start/End: Complemental strand, 16880166 - 16880114
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatg 129  Q
    ||||||||||||||||||||| ||||| |||||||| || ||| ||| |||||    
T  16880166 atgataattcatggcttgggtgtgcataattcatgaattattggtgataaatg 16880114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 117; Significance: 1e-59; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 105 - 233
Target Start/End: Complemental strand, 171922 - 171794
Alignment:
Q  105 attcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaattatgacatgttgttgttgaaatatgatggaatgcatgatca 204  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  171922 attcatgatttgttgttaagaaatggattgttgttggtggttttgtgaaattggtgaattacaacatgttgttgttgaaatatgatggaatgcatgatca 171823  T
Q  205 taagttgtggttgtggttaattgttgatg 233  Q
    |||||||||||||||||||||||||||||    
T  171822 taagttgtggttgtggttaattgttgatg 171794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 105 - 233
Target Start/End: Complemental strand, 177625 - 177497
Alignment:
Q  105 attcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaattatgacatgttgttgttgaaatatgatggaatgcatgatca 204  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  177625 attcatgatttgttgttaagaaatggattgttgttggtggttttgtgaaattggtgaattacaacatgttgttgttgaaatatgatggaatgcatgatca 177526  T
Q  205 taagttgtggttgtggttaattgttgatg 233  Q
    |||||||||||||||||||||||||||||    
T  177525 taagttgtggttgtggttaattgttgatg 177497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 70826 - 70913
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||   ||||||||||| ||| |||||||| |||||||    
T  70826 atgataattcatgacttgggtttgcatgattcatggtttgttgttgagaaatgagatgttgttggtgttttggtgaaatttgtgaatt 70913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 143
Target Start/End: Complemental strand, 60849 - 60784
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtg 143  Q
    ||||||||||||| |||||||||||||||||||||||||| ||| ||||||||   |||||||||||    
T  60849 atgataattcatgacttgggtttgcatgattcatgatttg-tgtggagaaatgagatgttgttggtg 60784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 77 - 233
Target Start/End: Complemental strand, 4984 - 4831
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaattatgacatgttgt 176  Q
    ||||||||||||||||||| | | ||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  4984 atgataattcatggcttggttgttcataattcatgatttgctgatgagaaatggattgttgttggtggttttgtgaaattggtgaattatgacatgtt-- 4887  T
Q  177 tgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatg 233  Q
     ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  4886 -gttgaaatatgatggaatgcatgattataagttgtggttgtggttaattgttgatg 4831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 85 - 233
Target Start/End: Complemental strand, 272061 - 271914
Alignment:
Q  85 tcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaattatgacatgttgttgttgaaa 184  Q
    |||| |||||||| ||||| |||||||| ||||| | ||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||    
T  272061 tcattgcttgggtatgcat-attcatgaattgttatagagaaatggattgttgttggtggttttgtgaaattagtgaattaagacatgtagttgttgaaa 271963  T
Q  185 tatgatggaatgcatgatcataagttgtggttgtggttaattgttgatg 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  271962 tatgatggaatgcatgatcataagttgtggttgtggttaattgttgatg 271914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 77 - 233
Target Start/End: Original strand, 11912 - 12068
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa-ttggtgaattatgacatgttg 175  Q
    |||||||||||||||||| ||||||||| ||||||||| || |||||||||||   |||| |||||| ||| |||||| |||||||||||||||||||||    
T  11912 atgataattcatggcttgagtttgcatggttcatgattggt-gttgagaaatgagatgtttttggtgttttggtgaaaattggtgaattatgacatgttg 12010  T
Q  176 ttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatg 233  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  12011 ttgttgaaatatgatggaatgcatgattataagttgtggttgtgtttaattgttgatg 12068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 97; Significance: 9e-48; HSPs: 3)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 117 - 229
Target Start/End: Original strand, 13537 - 13649
Alignment:
Q  117 ttgttgagaaatggattgttgttggtggttttgtgaaattggtgaattatgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggtt 216  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  13537 ttgttgagaaatggattgttgttagtggttttgtgaaattggtgaattacgacatgttcttgttgaaatatgatggaatgcatgatcataaattgtggtt 13636  T
Q  217 gtggttaattgtt 229  Q
    |||||||||||||    
T  13637 gtggttaattgtt 13649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 230
Target Start/End: Original strand, 116284 - 116361
Alignment:
Q  153 aattggtgaattatgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttg 230  Q
    ||||| |||||| |||||||||||| ||||  | || | |||| |||||| ||||||||||||||| |||||||||||    
T  116284 aattgatgaattgtgacatgttgttattgatttgtggttgaatacatgattataagttgtggttgttgttaattgttg 116361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 55620 - 55546
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatga-tttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||||||||||||||| |||||||||||| | ||||||||||  ||||   ||||||||| |||||| ||||||    
T  55620 taattcatggcttgggtatgcatgattcataattttgttgttgtaaaataagttgttgttgttggtttggtgaaa 55546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 2e-36; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 77 - 162
Target Start/End: Original strand, 35015369 - 35015454
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35015369 atgatgatacatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaa 35015454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 77 - 162
Target Start/End: Original strand, 19983503 - 19983588
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19983503 atgatgatacatggcttgggtttgcatgattcatggtttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaa 19983588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 78 - 164
Target Start/End: Original strand, 18381888 - 18381974
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    |||| ||||||||||||||| | ||| ||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||    
T  18381888 tgatgattcatggcttgggtattcataattcatgatttgttgatgagaaatgagttgttgttggtggttttgtgaaattggtgaatt 18381974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 77 - 155
Target Start/End: Complemental strand, 18583376 - 18583299
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaat 155  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||| ||||    
T  18583376 atgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgttggtggttttgtaaaat 18583299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 233
Target Start/End: Original strand, 15889840 - 15889914
Alignment:
Q  159 tgaattatgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatg 233  Q
    |||||||||||||||||||| |||| | |||||||||||||||| ||||||||||||||||||| ||||||||||    
T  15889840 tgaattatgacatgttgttgatgaattgtgatggaatgcatgattataagttgtggttgtggttgattgttgatg 15889914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 32898833 - 32898746
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||   || |||||||| ||| |||||||| |||||||    
T  32898833 atgataattaatggcttgggtttgcatgattcatggtttgttgttgagaaatgagatgatgttggtgttttggtgaaatttgtgaatt 32898746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 77 - 143
Target Start/End: Complemental strand, 31628311 - 31628245
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtg 143  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||   |||||||||||    
T  31628311 atgataattcatggcttgggtttgcatgattcatgatttgttgtggagaaatgagatgttgttggtg 31628245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 230
Target Start/End: Original strand, 25640683 - 25640760
Alignment:
Q  153 aattggtgaattatgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttg 230  Q
    ||||| |||||| |||||||||||||||||| | |||||||||||||||| ||||||||| ||||||||| |||||||    
T  25640683 aattgatgaattgtgacatgttgttgttgaattttgatggaatgcatgattataagttgttgttgtggttgattgttg 25640760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 77 - 155
Target Start/End: Original strand, 18823600 - 18823677
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaat 155  Q
    |||||||| ||||||||||||||||||||||||||| ||||||| ||||||||  |||||| |||||||||||| ||||    
T  18823600 atgataatccatggcttgggtttgcatgattcatga-ttgttgtggagaaatgagttgttggtggtggttttgtaaaat 18823677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 77 - 155
Target Start/End: Original strand, 18839455 - 18839532
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaat 155  Q
    |||||||| ||||||||||||||||||||||||||| ||||||| ||||||||  |||||| |||||||||||| ||||    
T  18839455 atgataatccatggcttgggtttgcatgattcatga-ttgttgtggagaaatgagttgttggtggtggttttgtaaaat 18839532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 233
Target Start/End: Original strand, 22585681 - 22585754
Alignment:
Q  160 gaattatgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatg 233  Q
    |||||||||||||||||||||||| | ||||| |||||||||| ||||||||||||| | ||| ||||||||||    
T  22585681 gaattatgacatgttgttgttgaattgtgatgcaatgcatgattataagttgtggttatagttgattgttgatg 22585754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 233
Target Start/End: Original strand, 22590512 - 22590585
Alignment:
Q  160 gaattatgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatg 233  Q
    |||||||||||||||||||||||| | ||||| |||||||||| ||||||||||||| | ||| ||||||||||    
T  22590512 gaattatgacatgttgttgttgaattgtgatgcaatgcatgattataagttgtggttatagttgattgttgatg 22590585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 15005034 - 15005114
Alignment:
Q  153 aattggtgaattatgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatg 233  Q
    ||||| ||||||||||||||||||||||||| | |||| ||||| ||||| ||||||||||||||| ||| ||| ||||||    
T  15005034 aattgatgaattatgacatgttgttgttgaattgtgatagaatgaatgattataagttgtggttgtagttgattattgatg 15005114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 167
Target Start/End: Original strand, 15742439 - 15742525
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaattatg 167  Q
    ||||||||||||||||| |||||||||||| ||||||||||| |||||   ||||||||| |||||| |||||| |||  |||||||    
T  15742439 taattcatggcttgggtatgcatgattcataatttgttgttgtgaaataagttgttgttgctggtttggtgaaaatggataattatg 15742525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 18777185 - 18777112
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||||||||||||||| |||||||||||| ||||||||||| |||||   ||||||||| |||||| ||||||    
T  18777185 taattcatggcttgggtatgcatgattcataatttgttgttgtgaaataagttgttgttgttggtttggtgaaa 18777112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 25744417 - 25744504
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    ||||||||||||||||||||||||||| |||| || |||||||| ||||||||   ||||||||||| |||  ||||| |||| ||||    
T  25744417 atgataattcatggcttgggtttgcataattcttggtttgttgtagagaaatgagatgttgttggtgttttgatgaaaatggtaaatt 25744504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 79 - 129
Target Start/End: Original strand, 25367443 - 25367493
Alignment:
Q  79 gataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatg 129  Q
    ||||||||||||||||||| |||||||||||||| |||||| |||||||||    
T  25367443 gataattcatggcttgggtgtgcatgattcatgaattgttgatgagaaatg 25367493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 129
Target Start/End: Complemental strand, 18432686 - 18432634
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatg 129  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||||||| |||||    
T  18432686 atgataattcatggcttgggtttgcatgattaatggtttattgttgaaaaatg 18432634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 21623203 - 21623124
Alignment:
Q  85 tcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    ||||||||||||| | ||| ||||||||||||| | ||| |||||  ||||||||||| |||| || |||||||||||||    
T  21623203 tcatggcttgggtattcataattcatgatttgtggatgaaaaatgagttgttgttggtagtttggtaaaattggtgaatt 21623124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 80 - 142
Target Start/End: Complemental strand, 15740269 - 15740207
Alignment:
Q  80 ataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggt 142  Q
    ||||||||||| |||||| |||||||||||||| |||||| |||||||||   ||||||||||    
T  15740269 ataattcatggtttgggtgtgcatgattcatgaattgttgatgagaaatgagatgttgttggt 15740207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 115
Target Start/End: Complemental strand, 16086060 - 16086022
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgattt 115  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  16086060 atgataattcatgacttgggtttgcatgattcatgattt 16086022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 28195298 - 28195367
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttt 147  Q
    |||||||||||||||||| |||||||| ||| ||||||| |||||||||||||   |||||||||| ||||    
T  28195298 atgataattcatggcttgagtttgcataatt-atgatttattgttgagaaatgagatgttgttggtagttt 28195367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 18002712 - 18002784
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||||||||||||||| |||||||||||| | ||||||||| |||||   ||||||||| |||||| ||||||    
T  18002712 taattcatggcttgggtatgcatgattcat-acttgttgttgtgaaataagttgttgttgttggtttggtgaaa 18002784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 18398981 - 18398909
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgt 150  Q
    ||||||||||||||||||||| ||||| |||||||| ||| || | |||||||  ||||||||| |||||||||    
T  18398981 atgataattcatggcttgggtgtgcataattcatgaattg-tgataagaaatgagttgttgttgttggttttgt 18398909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 18570318 - 18570246
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||||||||| ||||| |||||||||||| ||||||||||| |||||  | |||||||| |||||| ||||||    
T  18570318 taattcatggcctgggtatgcatgattcataatttgttgttgtgaaat-aagtgttgttgttggtttggtgaaa 18570246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 22440977 - 22440890
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatga-tttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    |||||||||||||||||||| ||||||||||||||| |||||| | ||||||||   ||||||||||| |||  ||||| | |||||||    
T  22440977 atgataattcatggcttggg-ttgcatgattcatgattttgttatggagaaatgagatgttgttggtgttttgatgaaaattgtgaatt 22440890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 167
Target Start/End: Complemental strand, 23994962 - 23994875
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatga-tttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaattatg 167  Q
    ||||||||||||||||| |||||||||||| | |||||||||| |||||   ||||||||| | |||| |||||| |||  |||||||    
T  23994962 taattcatggcttgggtatgcatgattcataattttgttgttgtgaaataagttgttgttgttagtttggtgaaaatggataattatg 23994875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 159
Target Start/End: Original strand, 16556394 - 16556432
Alignment:
Q  121 tgagaaatggattgttgttggtggttttgtgaaattggt 159  Q
    ||||||||  |||||||||||||||||||||||||||||    
T  16556394 tgagaaataaattgttgttggtggttttgtgaaattggt 16556432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 159
Target Start/End: Original strand, 16632950 - 16632988
Alignment:
Q  121 tgagaaatggattgttgttggtggttttgtgaaattggt 159  Q
    ||||||||  |||||||||||||||||||||||||||||    
T  16632950 tgagaaataaattgttgttggtggttttgtgaaattggt 16632988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 22225993 - 22226034
Alignment:
Q  121 tgagaaatggattgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||||||  ||| ||||||||||||||||||||||||||||    
T  22225993 tgagaaataaattcttgttggtggttttgtgaaattggtgaa 22226034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 25919655 - 25919590
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtg 143  Q
    |||| ||||||||||||||| | ||| ||||||||||||||| ||| |||||  || |||||||||    
T  25919655 tgatgattcatggcttgggtattcataattcatgatttgttgatgaaaaatgagttattgttggtg 25919590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 17083383 - 17083459
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    |||| ||||||||||||||| | ||| | |||||||||| || | |||||||  ||||||||| || ||||||||||    
T  17083383 tgatgattcatggcttgggtgttcataaatcatgatttgatgattagaaatgagttgttgttgttgtttttgtgaaa 17083459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 150
Target Start/End: Original strand, 33538574 - 33538646
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgt 150  Q
    |||| |||||||||||| || | ||| | |||||||||| || |||||||||  ||||||||| |||||||||    
T  33538574 tgatgattcatggcttgagtgttcataaatcatgatttgatgatgagaaatgagttgttgttgttggttttgt 33538646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 76; Significance: 3e-35; HSPs: 4)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 87 - 162
Target Start/End: Original strand, 162401 - 162476
Alignment:
Q  87 atggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  162401 atggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaa 162476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 77 - 162
Target Start/End: Original strand, 166469 - 166554
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  166469 atgatgatacatggcttgggtttgcatgattcatgatttgttgttgaaaaatggattgttgttggtggttttgtgaaattggtgaa 166554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 78 - 164
Target Start/End: Original strand, 116718 - 116804
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    |||| ||||||||||||||| | ||| ||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||    
T  116718 tgatgattcatggcttgggtgttcataattcatgatttgttgatgaaaaatggattgttgttggtggttttgtaaaattggtgaatt 116804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 164
Target Start/End: Complemental strand, 164254 - 164171
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    ||||||||||||||||||||||| |||| || |||||||||||||||||   || |||||||| ||| |||||| |||||||||    
T  164254 taattcatggcttgggtttgcataattcttggtttgttgttgagaaatgagatggtgttggtgttttggtgaaaatggtgaatt 164171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 77 - 162
Target Start/End: Original strand, 6295 - 6380
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6295 atgatgatacatgacttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaa 6380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 77 - 162
Target Start/End: Original strand, 31492 - 31577
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||| || |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31492 atgatgatacatggcttaggtttgcatgattcataatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaa 31577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 77 - 162
Target Start/End: Complemental strand, 41352 - 41267
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||| || |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41352 atgatgatacatggcttaggtttgcatgattcataatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaa 41267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 69; Significance: 4e-31; HSPs: 2)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 1017 - 1089
Alignment:
Q  161 aattatgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatg 233  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1017 aattatgacatgttgttgttgaaatatgatggaatgcatgattataagttgtggttgtggttaattgttgatg 1089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 164
Target Start/End: Complemental strand, 6703 - 6617
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    |||| |||||||||||||||   ||| ||||||||||||||| |||||||||  ||||||||||||||||||| || | ||||||||    
T  6703 tgatgattcatggcttgggtggtcataattcatgatttgttgatgagaaatgagttgttgttggtggttttgtaaactgggtgaatt 6617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 45804 - 45876
Alignment:
Q  161 aattatgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatg 233  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  45804 aattatgacatgttgttgttgaaatatgatggaatgcatgattataagttgtggttgtggttaattgttgatg 45876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 66; Significance: 3e-29; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 153 - 222
Target Start/End: Original strand, 22186 - 22255
Alignment:
Q  153 aattggtgaattatgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggtt 222  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22186 aattggtgaattatgacatgttgttgttgaaatatgatggaatgcatgattataagttgtggttgtggtt 22255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 132454 - 132541
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||| ||| |||||||| |||||||    
T  132454 atgataattcatggcttgggtttgcatgattcatggtttgttgttgagaaatgaaatgttgttggtgttttggtgaaatttgtgaatt 132541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 11730 - 11660
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttt 147  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||||   |||||||||||||||    
T  11730 atgataattcatggcttggttatgcatgattcatgatttgttgttgagaaatgagatgttgttggtggttt 11660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1295 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 153 - 229
Target Start/End: Complemental strand, 233 - 157
Alignment:
Q  153 aattggtgaattatgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgtt 229  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  233 aattgttgaattatgacatgttgttgttgaaatatgatggaatgcatgattataagttgtggttgtgattaattgtt 157  T

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Target: scaffold0507 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 153 - 229
Target Start/End: Original strand, 1629 - 1705
Alignment:
Q  153 aattggtgaattatgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgtt 229  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  1629 aattgatgaattatgacatgttgttgttgaaatatgatggaatgcatgattataagttgtggttgtgattaattgtt 1705  T

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Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 11287460 - 11287372
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtg-aaattggtgaatt 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  11287460 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatgagatgttgttggtggtttggtgaaaattggtgaatt 11287372  T

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Target: chr7; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 77 - 143
Target Start/End: Complemental strand, 126458 - 126392
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtg 143  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  126458 atgatgatacatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtg 126392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 77 - 162
Target Start/End: Original strand, 1937212 - 1937297
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||| || |||| |||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||| ||||    
T  1937212 atgatgatacatgacttgggtttgcatgattcataattttttgttgagaaatggattattgttggtggttttgtgaaattgatgaa 1937297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 17224142 - 17224229
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    ||||| ||||||||||||||| | ||| ||||||||||||||| |||||||||  ||||||||||||||||||| |||||||||||||    
T  17224142 atgatgattcatggcttgggtattcataattcatgatttgttgatgagaaatgagttgttgttggtggttttgtaaaattggtgaatt 17224229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 13352079 - 13351999
Alignment:
Q  153 aattggtgaattatgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatg 233  Q
    ||||| ||||||||||||||||||||||||| |  ||||||||||||||| ||||||||||||||||||  ||||||||||    
T  13352079 aattgatgaattatgacatgttgttgttgaattgggatggaatgcatgattataagttgtggttgtggtagattgttgatg 13351999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 80 - 155
Target Start/End: Original strand, 7284267 - 7284341
Alignment:
Q  80 ataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaat 155  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||  ||||||||||||||||||| ||||    
T  7284267 ataattcatggcttgagtttgcatgattcatga-ttgttgttgagaaatgagttgttgttggtggttttgttaaat 7284341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 15822635 - 15822722
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    ||||| ||||||||||||||||||||||||||||| ||||| |||||||||||   ||||||||||| ||| |||||||| |||||||    
T  15822635 atgatcattcatggcttgggtttgcatgattcatggtttgtggttgagaaatgagatgttgttggtgttttggtgaaatttgtgaatt 15822722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 77 - 154
Target Start/End: Original strand, 32494258 - 32494335
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    |||||||||||||||||| || |||||||||||| |||||||||||||||||  |||||||||| |||||| ||||||    
T  32494258 atgataattcatggcttgtgtatgcatgattcataatttgttgttgagaaataaattgttgttgttggtttggtgaaa 32494335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 77 - 129
Target Start/End: Original strand, 16570210 - 16570262
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatg 129  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16570210 atgataattcatggcttgggtatgcatgattcatgatttgttgttgagaaatg 16570262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 77 - 129
Target Start/End: Complemental strand, 16595452 - 16595400
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatg 129  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16595452 atgataattcatggcttgggtatgcatgattcatgatttgttgttgagaaatg 16595400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 35094860 - 35094773
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    ||||||| ||||||||||||||||||| |||| ||||||||||||||||||||   ||||||||||| ||| |||||| || ||||||    
T  35094860 atgataaatcatggcttgggtttgcataattcttgatttgttgttgagaaatgagatgttgttggtgttttggtgaaaatgatgaatt 35094773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 78 - 164
Target Start/End: Original strand, 49047879 - 49047966
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgt-gaaattggtgaatt 164  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |   |||||||||| |||| ||  |||||||||||||    
T  49047879 tgataattcatggcttgggtatgcatgattcatgatttgttgttgagaaacgagatgttgttggtagtttggtaaaaattggtgaatt 49047966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 12248325 - 12248395
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttt 147  Q
    |||||||| |||| ||||||| |||||||||||||||||||||||||||||||   |||||||||||||||    
T  12248325 atgataatgcatgacttgggtatgcatgattcatgatttgttgttgagaaatgagatgttgttggtggttt 12248395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 154
Target Start/End: Original strand, 111481 - 111557
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||||||||||||||||||| |||||||||||  |||||||||||||||||  |||||||||| |||||| ||||||    
T  111481 atgataattcatggcttgggtatgcatgattca-aatttgttgttgagaaataaattgttgttgttggtttggtgaaa 111557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 154
Target Start/End: Original strand, 26070468 - 26070545
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||   ||||||||| | |||| ||||||    
T  26070468 atgattattcatggcttgggtatgcatgattcatgatttgttgttgagaaataagttgttgttgttagtttggtgaaa 26070545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 154
Target Start/End: Original strand, 26094255 - 26094332
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||   ||||||||| | |||| ||||||    
T  26094255 atgattattcatggcttgggtatgcatgattcatgatttgttgttgagaaataagttgttgttgttagtttggtgaaa 26094332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 15977975 - 15978046
Alignment:
Q  159 tgaattatgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttg 230  Q
    ||||||||||||||||||||||||| | || | |||| |||||| ||||||||||||||| |||||||||||    
T  15977975 tgaattatgacatgttgttgttgaattgtggttgaatacatgattataagttgtggttgttgttaattgttg 15978046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 39046827 - 39046914
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    ||||||||||||||||||||||||||| |||| |||| |||||||||||||||   ||||||||||| |||  ||||| || ||||||    
T  39046827 atgataattcatggcttgggtttgcataattcttgatctgttgttgagaaatgagatgttgttggtgttttgatgaaaatgatgaatt 39046914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 13274830 - 13274742
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgt-gaaattggtgaatt 164  Q
    ||||| ||||||||||| ||| ||||||||||||| |||||||||||||||||   |||||||||| |||| ||  |||||||||||||    
T  13274830 atgatgattcatggctttggtatgcatgattcatgttttgttgttgagaaatgagatgttgttggtagtttggtaaaaattggtgaatt 13274742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 153 - 244
Target Start/End: Complemental strand, 7292977 - 7292886
Alignment:
Q  153 aattggtgaattatgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatgtccatctcatt 244  Q
    ||||| |||| ||||| | |||||||||||| ||||||||| || ||||| ||| |||||| |||||||| |||||||||||  ||||||||    
T  7292977 aattgatgaaatatgataagttgttgttgaattatgatggagtgtatgattatatgttgtgattgtggttgattgttgatgttgatctcatt 7292886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 143
Target Start/End: Original strand, 45452370 - 45452435
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtg 143  Q
    |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||   |||||||||||    
T  45452370 atgataattcatggcttgggttggcatgattcatgatttg-tgtggagaaatgagatgttgttggtg 45452435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 3895064 - 3894991
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||||||||||||||| |||||||||||| |||||||||||  ||||   ||||||||| |||||| ||||||    
T  3895064 taattcatggcttgggtatgcatgattcataatttgttgttgtaaaataagttgttgttgttggtttggtgaaa 3894991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 128
Target Start/End: Complemental strand, 3049622 - 3049575
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatgatttgttgttgagaaat 128  Q
    ||||||||||||||||| |||||||||||| ||||||||||| |||||    
T  3049622 taattcatggcttgggtatgcatgattcataatttgttgttgtgaaat 3049575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 154
Target Start/End: Original strand, 12370050 - 12370121
Alignment:
Q  83 attcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||||||||| ||| |||||||||||||||||||| |||||||||   |||| |||| |||||| ||||||    
T  12370050 attcatggcttaggtatgcatgattcatgatttgttattgagaaataagttgtagttgttggtttggtgaaa 12370121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 244
Target Start/End: Complemental strand, 11516343 - 11516265
Alignment:
Q  166 tgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatgtccatctcatt 244  Q
    |||||||||||||||||| ||||||||| || ||||  ||| ||| || |||||||| |||||||||||  ||||||||    
T  11516343 tgacatgttgttgttgaattatgatggagtgtatgagtatatgttatgattgtggttgattgttgatgttgatctcatt 11516265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 164
Target Start/End: Complemental strand, 12759029 - 12758944
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    ||||||||||||||||||||||||| |||| |||||||| ||| ||||||||   ||||||||||| |||  | ||| |||||||||    
T  12759029 tgataattcatggcttgggtttgcaggatttatgatttg-tgtggagaaatgagatgttgttggtgttttgataaaaatggtgaatt 12758944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 244
Target Start/End: Original strand, 15441711 - 15441789
Alignment:
Q  166 tgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatgtccatctcatt 244  Q
    |||||||||||||||||| ||||||||| || ||||| ||| ||| || |||||||| |||| ||||||  ||||||||    
T  15441711 tgacatgttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgatgatgttgatctcatt 15441789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 244
Target Start/End: Original strand, 30262276 - 30262354
Alignment:
Q  166 tgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatgtccatctcatt 244  Q
    |||||||||||||||||| ||||||||| || ||||| ||| ||| || |||||||| |||| ||||||  ||||||||    
T  30262276 tgacatgttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgatgatgttgatctcatt 30262354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 165
Target Start/End: Complemental strand, 47289824 - 47289736
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatga-tttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatta 165  Q
    |||||||||||||||||| ||| ||||||||||||| |||||| | ||||||||   ||||||||||| |||  ||||| ||||||||||    
T  47289824 atgataattcatggcttgtgtt-gcatgattcatgattttgttatggagaaatgagatgttgttggtgttttgatgaaaatggtgaatta 47289736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 143688 - 143601
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatga-tttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    |||||||||||||||||||| |||||| |||||||| |||||| | ||||||||   ||||||||||| |||  ||||| |||||||||    
T  143688 atgataattcatggcttggg-ttgcataattcatgattttgttatggagaaatgagatgttgttggtgttttgatgaaaatggtgaatt 143601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 18151494 - 18151550
Alignment:
Q  174 tgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttg 230  Q
    |||||||||| | |||| |||| |||||| ||||||||||||||||||| |||||||    
T  18151494 tgttgttgaattgtgattgaatacatgattataagttgtggttgtggttgattgttg 18151550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 167
Target Start/End: Original strand, 42056505 - 42056592
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatga-tttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaattatg 167  Q
    ||||||||||||||||| |||||||||||| | |||||||||| |||||   ||||||||| | |||| |||||| |||  |||||||    
T  42056505 taattcatggcttgggtatgcatgattcataattttgttgttgtgaaataagttgttgttgttagtttggtgaaaatggataattatg 42056592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 163
Target Start/End: Complemental strand, 44865270 - 44865184
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatga-tttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaat 163  Q
    |||||||||||||||||||| |||||| |||||||| |||||| | ||||||||   ||||||||||| |||  ||||| ||||||||    
T  44865270 atgataattcatggcttggg-ttgcataattcatgattttgttatggagaaatgagatgttgttggtgttttgatgaaaatggtgaat 44865184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 162
Target Start/End: Complemental strand, 371077 - 371048
Alignment:
Q  133 tgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||||||||||||||||||||||||||||    
T  371077 tgttgttggtggttttgtgaaattggtgaa 371048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 154
Target Start/End: Complemental strand, 13377572 - 13377495
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||| ||||||||||||||| | ||| | |||||||||| || ||||||||   ||||||||| |||||| ||||||    
T  13377572 atgatgattcatggcttgggtgttcataaatcatgatttgatgatgagaaataagttgttgttgttggtttggtgaaa 13377495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 162
Target Start/End: Original strand, 14251165 - 14251194
Alignment:
Q  133 tgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||||||||||||||||||||||||||||    
T  14251165 tgttgttggtggttttgtgaaattggtgaa 14251194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 155
Target Start/End: Original strand, 14272091 - 14272168
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaat 155  Q
    |||| |||||||||||| || | ||| |||||||||| | || |||||||||  |||||| |||||||||||| ||||    
T  14272091 tgatgattcatggcttgagtgttcataattcatgattagatgatgagaaatgagttgttggtggtggttttgtaaaat 14272168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 15951046 - 15951087
Alignment:
Q  121 tgagaaatggattgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||||||  |||||||||||||||||| |||||||||||||    
T  15951046 tgagaaataaattgttgttggtggttttctgaaattggtgaa 15951087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 155
Target Start/End: Complemental strand, 48356686 - 48356609
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaat 155  Q
    |||| ||||||||||||||| | ||| | |||||||||| || |||||| ||  ||||||||| ||||||||| ||||    
T  48356686 tgatgattcatggcttgggtgttcataaatcatgatttgatgatgagaattgagttgttgttgttggttttgtaaaat 48356609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 4e-28; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 87 - 162
Target Start/End: Original strand, 44035192 - 44035267
Alignment:
Q  87 atggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaa 162  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  44035192 atggcttgagtttgcatgattcataatttgttgttgagaaatggattgttgttggtggttttgtgcaattggtgaa 44035267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 77 - 154
Target Start/End: Original strand, 15861636 - 15861713
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  15861636 atgatgatgcatgacttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtgttttggtgaaa 15861713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 77 - 154
Target Start/End: Complemental strand, 22367062 - 22366985
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  22367062 atgatgatacatgacttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtgttttggtgaaa 22366985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 83 - 164
Target Start/End: Original strand, 13377050 - 13377131
Alignment:
Q  83 attcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    |||||||||||| || | ||| ||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||    
T  13377050 attcatggcttgagtattcataattcatgatttgttgatgagaaatgaattgttgttggcggttttgtgaaattggtgaatt 13377131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 35522523 - 35522610
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtg-aaattggtgaatt 164  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||   ||||||||||| ||| ||| |||||||||||||    
T  35522523 atgataattcatggcttgggtttgcatgattcatgatttg-tgttgagaaatgagatgttgttggtgttttggtgaaaattggtgaatt 35522610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 51627868 - 51627956
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgt-gaaattggtgaatt 164  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||||   ||||||||||||||| ||  |||||||||||||    
T  51627868 atgataattcatggcttgggtatgcatgattcatgatttgctgttgagaaatgagatgttgttggtggtttggtaaaaattggtgaatt 51627956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 20177218 - 20177131
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    ||||| ||||||||||||| | | ||| |||||||||||||||  ||||||||  |||||||||||||||||||||||||||||||||    
T  20177218 atgatgattcatggcttggatattcataattcatgatttgttgaagagaaatgagttgttgttggtggttttgtgaaattggtgaatt 20177131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 77 - 154
Target Start/End: Complemental strand, 21860054 - 21859977
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||| || ||||||| ||||||||||||||||| |||||||||||||||||| |||||||||| |||||| ||||||    
T  21860054 atgatgatacatggctcgggtttgcatgattcataatttgttgttgagaaatgaattgttgttgttggtttggtgaaa 21859977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 78 - 143
Target Start/End: Original strand, 22829629 - 22829694
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtg 143  Q
    |||||||||||||||||||| ||||| ||||||||||||||| |||||||||  ||||||||||||    
T  22829629 tgataattcatggcttgggtgtgcataattcatgatttgttgatgagaaatgagttgttgttggtg 22829694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 154
Target Start/End: Complemental strand, 41212112 - 41212035
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||||||||||||||||||||||||| |||| || |||||||||||||||||   ||||||||||| ||| ||||||    
T  41212112 atgataattcatggcttgggtttgcataattcttggtttgttgttgagaaatgagatgttgttggtgttttggtgaaa 41212035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 21718271 - 21718184
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtg-aaattggtgaatt 164  Q
    |||||||||||||||||||||||||||||||||||  ||||| ||||||||||   ||||||||||| |||  || |||||||||||||    
T  21718271 atgataattcatggcttgggtttgcatgattcatg-gttgttcttgagaaatgagatgttgttggtgttttgatgaaaattggtgaatt 21718184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 165
Target Start/End: Complemental strand, 49967693 - 49967606
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatta 165  Q
    |||||||||||| |||| |||||||||||||||||  ||||||||||| ||||   ||||||||||| ||| |||||||| ||||||||    
T  49967693 atgataattcattgcttcggtttgcatgattcatg-gttgttgttgaggaatgagatgttgttggtgttttggtgaaatttgtgaatta 49967606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 165
Target Start/End: Original strand, 41229149 - 41229231
Alignment:
Q  83 attcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatta 165  Q
    |||||||||||| || | ||| ||||||||||||| | |||||||||  ||||||||||| |||| || ||||||||||||||    
T  41229149 attcatggcttgagtgttcataattcatgatttgtggatgagaaatgagttgttgttggtagtttggtaaaattggtgaatta 41229231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 19603139 - 19603074
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtg 143  Q
    |||||||||||| ||||||| || || ||||||||||||||| |||||||||  ||||||||||||    
T  19603139 tgataattcatgacttgggtgtgaataattcatgatttgttgatgagaaatgagttgttgttggtg 19603074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 22143566 - 22143635
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttt 147  Q
    |||| ||||||||||||||| | ||| |||||||||||| || |||||||| ||||||||||| ||||||    
T  22143566 tgatgattcatggcttgggtattcataattcatgatttgatgatgagaaatcgattgttgttgttggttt 22143635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 27674838 - 27674774
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtg 143  Q
    |||||||||||||||||||| ||||| ||||||||||| ||| |||||||||  ||||||||||||    
T  27674838 tgataattcatggcttgggtgtgcataattcatgattt-ttgatgagaaatgagttgttgttggtg 27674774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 35054795 - 35054722
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||||||||||||||| |||||||||||| ||||||||||| | |||   ||||||||| |||||| ||||||    
T  35054795 taattcatggcttgggtatgcatgattcataatttgttgttgtggaataagttgttgttgttggtttggtgaaa 35054722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 18060013 - 18060054
Alignment:
Q  121 tgagaaatggattgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||||||  ||||||||||||||||||||||||||||||||    
T  18060013 tgagaaataaattgttgttggtggttttgtgaaattggtgaa 18060054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 22403314 - 22403401
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatga-tttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    ||||||||||||||||||||||| |||||||||||| |||||| | ||||||||   ||||||||||  |||  ||||| |||||||||    
T  22403314 atgataattcatggcttgggttt-catgattcatgattttgttatggagaaatgagatgttgttggtattttgatgaaaatggtgaatt 22403401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 116
Target Start/End: Original strand, 9784304 - 9784343
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttg 116  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  9784304 atgatcattcatggcttgggcttgcatgattcatgatttg 9784343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 120
Target Start/End: Original strand, 27329963 - 27330002
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatgatttgttgt 120  Q
    ||||||||||||||||| |||||||||||| |||||||||    
T  27329963 taattcatggcttgggtatgcatgattcataatttgttgt 27330002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 148
Target Start/End: Complemental strand, 21195056 - 21194986
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggtttt 148  Q
    |||| ||||||||||||||| | ||| | |||||||||| || |||||||||  ||||||||| |||||||    
T  21195056 tgatgattcatggcttgggtgttcataaatcatgatttgatgatgagaaatgagttgttgttgttggtttt 21194986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 244
Target Start/End: Complemental strand, 51452608 - 51452530
Alignment:
Q  166 tgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatgtccatctcatt 244  Q
    |||||||||||||||||| ||||||||| || ||||| ||| ||| || |||| ||| |||| ||||||  ||||||||    
T  51452608 tgacatgttgttgttgaattatgatggagtgtatgattatatgttatgattgtagttgattgatgatgttgatctcatt 51452530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 162
Target Start/End: Original strand, 21650307 - 21650336
Alignment:
Q  133 tgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||||||||||||||||||||||||||||    
T  21650307 tgttgttggtggttttgtgaaattggtgaa 21650336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 36356497 - 36356581
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    ||||| ||| ||||||||||| | ||| ||||||||||||| | |||||||||    ||||||||| |||| || |||||||||||||    
T  36356497 atgatgatttatggcttgggtgttcataattcatgatttgtggatgagaaatg---agttgttggtagtttggtaaaattggtgaatt 36356581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 77 - 155
Target Start/End: Complemental strand, 31254 - 31176
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaat 155  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||| ||||    
T  31254 atgataattcatggcttgggtttgcatgattcatgaattgttgttgagaaatgagttgttgttggtggttttgtaaaat 31176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 77 - 155
Target Start/End: Complemental strand, 21555 - 21477
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaat 155  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||  ||||||||||||||||||| ||||    
T  21555 atgataattcatggcttgggtttgcatgattcatgaattgttgttaagaaatgagttgttgttggtggttttgtaaaat 21477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 9030 - 8942
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtg-aaattggtgaatt 164  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  9030 atgataattcatggcttgggtttgcttgattcatgatttgttgttgagaaatgagatgttgttggtggtttggtgaaaattggtgaatt 8942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 109666 - 109754
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtg-aaattggtgaatt 164  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  109666 atgataattcatggcttgggattgcatgattcatgatttgttgttgagaaatgagatgttgttggtggtttggtgaaaattggtgaatt 109754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 118167 - 118255
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtg-aaattggtgaatt 164  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  118167 atgataattcatggcttggggttgcatgattcatgatttgttgttgagaaatgagatgttgttggtggtttggtgaaaattggtgaatt 118255  T

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Target: scaffold0833 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0833
Description:

Target: scaffold0833; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 77 - 155
Target Start/End: Complemental strand, 3342 - 3265
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaat 155  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||| ||||    
T  3342 atgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgttggtggttttgtaaaat 3265  T

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Target: scaffold0053 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 78 - 164
Target Start/End: Original strand, 77052 - 77138
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    |||| ||||||||||||||| | ||| ||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||    
T  77052 tgatgattcatggcttgggtattcataattcatgatttgttgatgagaaatgagttgttgttggtggttttgtgaaattggtgaatt 77138  T

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Target: scaffold0342 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 77 - 162
Target Start/End: Original strand, 663 - 747
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||| || |||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  663 atgatgatacatggcttgggtttgcatgattaataatttgttgttgagaaatggattattgttggtggttttgtg-aattggtgaa 747  T

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Target: scaffold0673 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 77 - 156
Target Start/End: Original strand, 1026 - 1105
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaatt 156  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||   ||||||||||| ||| ||||||||    
T  1026 atgataattcatggcttgggtttgcatgattcatggtttgttgttgagaaatgagatgttgttggtgatttggtgaaatt 1105  T

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Target: scaffold0673; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 77 - 161
Target Start/End: Original strand, 7052 - 7136
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtga 161  Q
    ||||||||||||||||||||||||||| |||| || |||||||||||||||||   ||||||||||| |||  ||||| ||||||    
T  7052 atgataattcatggcttgggtttgcataattcttggtttgttgttgagaaatgagatgttgttggtgttttgatgaaaatggtga 7136  T

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Target: scaffold0480 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 5450 - 5537
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||||   ||||||||||| ||| |||||| |||||||||    
T  5450 atgataattcatggtttgggtttgcatgattcatggtttgttgttgagaaatgagatgttgttggtgttttggtgaaaatggtgaatt 5537  T

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Target: scaffold0480; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 9086 - 9156
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttt 147  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||||   |||||| ||||||||    
T  9086 atgataattcatggcttaggtatgcatgattcatgatttgttgttgagaaatgagatgttgtcggtggttt 9156  T

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Target: scaffold0011 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 255018 - 255105
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||||||   ||||||||||| ||| |||||||| |||||||    
T  255018 atgataattcatggcttgagtttgcatgattcatggtttgttgttgagaaatgagatgttgttggtgttttcgtgaaatttgtgaatt 255105  T

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Target: scaffold0011; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 261624 - 261711
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||||||   ||||||||||| ||| |||||||| |||||||    
T  261624 atgataattcatggcttgagtttgcatgattcatggtttgttgttgagaaatgagatgttgttggtgttttcgtgaaatttgtgaatt 261711  T

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Target: scaffold1164 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 77 - 154
Target Start/End: Complemental strand, 1424 - 1347
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||| ||| ||||||    
T  1424 atgataaatcatggcttgggtttgcatgattcatgatttgttgttgagaaatgagatgttgttggtgttttggtgaaa 1347  T

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Target: scaffold0610 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 77 - 154
Target Start/End: Original strand, 780 - 857
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||   ||||||||||| ||| ||||||    
T  780 atgataattcatggcttgggttggcatgattcatgatttgttgttgagaaatgagatgttgttggtgttttggtgaaa 857  T

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Target: scaffold0195 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 77 - 154
Target Start/End: Original strand, 722 - 799
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||   ||||||||||| ||| ||||||    
T  722 atgataattcatggcttgggttggcatgattcatgatttgttgttgagaaatgagatgttgttggtgttttggtgaaa 799  T

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Target: scaffold0039 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 77 - 154
Target Start/End: Original strand, 12732 - 12809
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||  |||||||||| |||||| ||||||    
T  12732 atgataattcatggcttgggtatgcatgattcataatttgttgttgagaaataaattgttgttgttggtttggtgaaa 12809  T

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Target: scaffold0039; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 77 - 154
Target Start/End: Original strand, 19113 - 19190
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||  |||||||||| |||||| ||||||    
T  19113 atgataattcatggcttgggtatgcatgattcataatttgttgttgagaaataaattgttgttgttggtttggtgaaa 19190  T

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Target: scaffold0022 (Bit Score: 54; Significance: 4e-22; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 78 - 143
Target Start/End: Original strand, 112747 - 112812
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtg 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||    
T  112747 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatgagatgttgttggtg 112812  T

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Target: scaffold0022; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 109633 - 109545
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgt-gaaattggtgaatt 164  Q
    ||||||||||||||||||||| |||| |||||||||||||||| |||||||||   |||||||||| |||| ||  |||||||||||||    
T  109633 atgataattcatggcttgggtatgcacgattcatgatttgttgatgagaaatgagatgttgttggtagtttggtaaaaattggtgaatt 109545  T

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Target: scaffold0022; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 143
Target Start/End: Original strand, 103126 - 103192
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtg 143  Q
    |||||||||||||| |||||| ||||| |||||||| |||||| ||| |||||  ||||||||||||    
T  103126 atgataattcatggtttgggtgtgcataattcatgaattgttggtgataaatgagttgttgttggtg 103192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 85375 - 85287
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa-ttggtgaatt 164  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||    |||||||||| ||| |||||| ||||||||||    
T  85375 atgataattcatggtttgggtttgcatgattcatgatttgttgttgagaaatgagacgttgttggtgttttggtgaaacttggtgaatt 85287  T

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Target: scaffold0014; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 159345 - 159257
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtg-aaattggtgaatt 164  Q
    |||||||||  |||||||||| |||||||||||||||||||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  159345 atgataatttttggcttgggtatgcatgattcatgatttgttgttgagaaatgagatgttgttggtggtttggtgaaaattggtgaatt 159257  T

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Target: scaffold0008 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 161
Target Start/End: Complemental strand, 22734 - 22650
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtga 161  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||   ||||||||||| ||| |||||||| ||||    
T  22734 atgataattcatggcttgggtttgcatgattcatggtttgttattgagaaatgagatgttgttggtgttttggtgaaatttgtga 22650  T

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Target: scaffold1867 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold1867
Description:

Target: scaffold1867; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 77 - 155
Target Start/End: Complemental strand, 187 - 110
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaat 155  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||||||  ||||||||| ||||||||| ||||    
T  187 atgataattcatggcttgggtttgcatgattcatga-ttgttgctgagaaatgagttgttgttgttggttttgtaaaat 110  T

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Target: scaffold0158 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 77 - 155
Target Start/End: Complemental strand, 25001 - 24925
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaat 155  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||  ||||||||||||||||||| ||||    
T  25001 atgataattcatggcttgggtt-gcatgattcatgatt-gttgttgagaaatgagttgttgttggtggttttgtaaaat 24925  T

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Target: scaffold0158; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 25254 - 25218
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatt 114  Q
    |||||||||||||||||||| |||||||||||||||||    
T  25254 atgataattcatggcttggg-ttgcatgattcatgatt 25218  T

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Target: scaffold0740 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 77 - 165
Target Start/End: Complemental strand, 4350 - 4262
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatta 165  Q
    |||||||||||||| |||||||||||| |||| || |||||||||||||||||   ||||||||||| ||| |||||| ||||||||||    
T  4350 atgataattcatggtttgggtttgcataattcttggtttgttgttgagaaatgagatgttgttggtgttttggtgaaaatggtgaatta 4262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 1959 - 1871
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtg-aaattggtgaatt 164  Q
    |||||||||| ||||||| || |||||||||||||||||||||||||||||||   ||||||| ||||||| ||| |||||||||||||    
T  1959 atgataattcttggcttgagtatgcatgattcatgatttgttgttgagaaatgagatgttgttagtggtttggtgaaaattggtgaatt 1871  T

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Target: scaffold0359 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 77 - 129
Target Start/End: Complemental strand, 1360 - 1308
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatg 129  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  1360 atgatcattcatggcttgggtttgcatgattcatgatttgttgttgagaaatg 1308  T

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Target: scaffold0359; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 11855 - 11942
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatga-tttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    |||||||||||||||||||| |||||| | |||||| |||||| | ||||||||   ||||||||||| |||  ||||| |||||||||    
T  11855 atgataattcatggcttggg-ttgcataactcatgattttgttatggagaaatgagatgttgttggtgttttgatgaaaatggtgaatt 11942  T

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Target: scaffold0091 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 32246 - 32159
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    ||||||||||||||||||||||||||| || | || |||||||||||||||||   ||||||||||| ||| |||||| |||||||||    
T  32246 atgataattcatggcttgggtttgcataatccttggtttgttgttgagaaatgagatgttgttggtgttttggtgaaaatggtgaatt 32159  T

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Target: scaffold0091; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 42057 - 42144
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    ||||||||||||||||||||||||||| || | || |||||||||||||||||   ||||||||||| ||| |||||| |||||||||    
T  42057 atgataattcatggcttgggtttgcataatccttggtttgttgttgagaaatgagatgttgttggtgttttggtgaaaatggtgaatt 42144  T

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Target: scaffold0044 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 38341 - 38254
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    ||||||||||||  ||||||||||||||||||||| |||||||||||||||||   || |||||||| ||| |||||||| |||||||    
T  38341 atgataattcataacttgggtttgcatgattcatggtttgttgttgagaaatgagatgatgttggtgttttggtgaaatttgtgaatt 38254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 147
Target Start/End: Complemental strand, 7873 - 7807
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttt 147  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||   |||||||||| ||||    
T  7873 taattcatggcttgggtatgcatgattcatgatttgttgttgagaaatgagatgttgttggtagttt 7807  T

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Target: scaffold0310 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 77 - 155
Target Start/End: Original strand, 318 - 395
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaat 155  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||||||   | |||||||||||||||| ||||    
T  318 atgataattcatagcttgggtttgcatgattcatga-ttgttgttgagaaatgagcttttgttggtggttttgtaaaat 395  T

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Target: scaffold0190 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 77 - 143
Target Start/End: Complemental strand, 9980 - 9914
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtg 143  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||||   |||||||||||    
T  9980 atgattattcatggcttgggtttgcatgattcatgatttgttgtggagaaatgagatgttgttggtg 9914  T

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Target: scaffold0013 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 78 - 164
Target Start/End: Complemental strand, 35520 - 35435
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    |||| ||||||||||||||| | ||| ||||||||||||||| |||||||||  ||| ||||||||||||||| |||||||||||||    
T  35520 tgatgattcatggcttgggtattcataattcatgatttgttgatgagaaatgagttg-tgttggtggttttgtaaaattggtgaatt 35435  T

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Target: scaffold0077 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 15682 - 15755
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||||||||||||||| |||||||||||| |||| ||||||||||||  |||||||||| |||||| ||||||    
T  15682 taattcatggcttgggtatgcatgattcataattttttgttgagaaataaattgttgttgttggtttggtgaaa 15755  T

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Target: scaffold0092 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 129
Target Start/End: Complemental strand, 3358 - 3310
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatgatttgttgttgagaaatg 129  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  3358 taattcatggcttgggtatgcatgattcatgatttgttgttgagaaatg 3310  T

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Target: scaffold0079 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 3969 - 4049
Alignment:
Q  153 aattggtgaattatgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatg 233  Q
    ||||| ||||||| ||||||||||| ||||| | ||||||||||||| || |||||||||||||||| || ||||||||||    
T  3969 aattgatgaattacgacatgttgttattgaattgtgatggaatgcataattataagttgtggttgtgcttgattgttgatg 4049  T

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Target: scaffold0031 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 31087 - 30999
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgt-gaaattggtgaatt 164  Q
    ||||||||| ||||||||||| |||||||||||||| ||||||||||||||||   ||||||||||| ||| ||  |||||||||||||    
T  31087 atgataatttatggcttgggtatgcatgattcatgacttgttgttgagaaatgagatgttgttggtgttttggtaaaaattggtgaatt 30999  T

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Target: scaffold0574 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 9723 - 9796
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||||||||||||||| |||||||||||| ||||||||||| |||||   ||||||||| |||||| ||||||    
T  9723 taattcatggcttgggtatgcatgattcataatttgttgttgtgaaataagttgttgttgttggtttggtgaaa 9796  T

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Target: scaffold0465 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 10182 - 10255
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||||||||||||||| |||||||||||| ||||||||||| |||||   ||||||||| |||||| ||||||    
T  10182 taattcatggcttgggtatgcatgattcataatttgttgttgtgaaataagttgttgttgatggtttggtgaaa 10255  T

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Target: scaffold0095 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 80 - 164
Target Start/End: Original strand, 33935 - 34019
Alignment:
Q  80 ataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgt-gaaattggtgaatt 164  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||   |||||||||| |||| ||  |||||||||||||    
T  33935 ataattcatggcttgggtatgcatgatt-atgatttgttgttgagaaatgagatgttgttggtagtttggtaaaaattggtgaatt 34019  T

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Target: scaffold0063 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 233
Target Start/End: Original strand, 44249 - 44322
Alignment:
Q  160 gaattatgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatg 233  Q
    |||||||||||||||||||||||| | |||||| ||||||||| | |||||||||||| |||| ||| ||||||    
T  44249 gaattatgacatgttgttgttgaattgtgatgggatgcatgattacaagttgtggttgaggttgattattgatg 44322  T

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Target: scaffold0057 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 153 - 230
Target Start/End: Complemental strand, 6010 - 5933
Alignment:
Q  153 aattggtgaattatgacatgttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttg 230  Q
    ||||| ||| |||||||||||||| |||||| | |||| |||||||||||  |||||||||||||||||| |||||||    
T  6010 aattgatgatttatgacatgttgtagttgaattgtgatcgaatgcatgattgtaagttgtggttgtggttgattgttg 5933  T

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Target: scaffold0150 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 155
Target Start/End: Complemental strand, 28573 - 28501
Alignment:
Q  83 attcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaat 155  Q
    ||||||||||||||| | ||| ||||||||||| ||| |||||||||  ||||||||||||||||||| ||||    
T  28573 attcatggcttgggtgttcataattcatgatttattggtgagaaatgagttgttgttggtggttttgtaaaat 28501  T

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Target: scaffold0083 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 14260 - 14173
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    ||||||||||||||||||||||||||| ||||  | |||||||||||||||||   ||||||||||| |||  ||||| |||| ||||    
T  14260 atgataattcatggcttgggtttgcataattctcggtttgttgttgagaaatgagatgttgttggtgttttgatgaaaatggttaatt 14173  T

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Target: scaffold0083; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 14920 - 14833
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    ||||||||||||||||||||||||||| ||||  | |||||||||||||||||   ||||||||||| |||  ||||| |||| ||||    
T  14920 atgataattcatggcttgggtttgcataattctcggtttgttgttgagaaatgagatgttgttggtgttttgatgaaaatggttaatt 14833  T

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Target: scaffold0034 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 77 - 128
Target Start/End: Complemental strand, 79907 - 79856
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaat 128  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||| |||||    
T  79907 atgataattcatggcttgggtatgcatgattcataatttgttgttgtgaaat 79856  T

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Target: scaffold1272 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 164
Target Start/End: Complemental strand, 351 - 265
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaatt 164  Q
    |||| ||||||| |||||||   ||| ||||||||||||||| |||||||||  ||||||||||||||||||| || | ||||||||    
T  351 tgattattcatgccttgggtgctcataattcatgatttgttgatgagaaatgagttgttgttggtggttttgtaaactgggtgaatt 265  T

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Target: scaffold0597 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 1194 - 1268
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatga-tttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||||||||||||||| |||||||||||| | ||||||||||||||||   ||||||||| |||||| ||||||    
T  1194 taattcatggcttgggtatgcatgattcataattttgttgttgagaaataagttgttgttgttggtttggtgaaa 1268  T

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Target: scaffold0244 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 22720 - 22793
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    |||||||||| |||||| |||||||||||| ||||||||||| |||||   ||||||||| |||||| ||||||    
T  22720 taattcatggtttgggtatgcatgattcataatttgttgttgtgaaataagttgttgttgttggtttggtgaaa 22793  T

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Target: scaffold0037 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 95014 - 94941
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    |||||||||| |||||| |||||||||||| ||||||||||| |||||   ||||||||| |||||| ||||||    
T  95014 taattcatggtttgggtatgcatgattcataatttgttgttgtgaaataagttgttgttgttggtttggtgaaa 94941  T

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Target: scaffold0037; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 24936 - 25009
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    |||||| |||||||||| | |||||||||| ||||||||||| |||||   ||||||||| |||||| ||||||    
T  24936 taattcttggcttgggtattcatgattcataatttgttgttgtgaaataagttgttgttgttggtttggtgaaa 25009  T

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Target: scaffold0025 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 146640 - 146567
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||||||||||||||| |||||||||||| ||||||| ||| |||||   ||||||||| |||||| ||||||    
T  146640 taattcatggcttgggtatgcatgattcataatttgtttttgtgaaataagttgttgttgttggtttggtgaaa 146567  T

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Target: scaffold0706 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 81 - 145
Target Start/End: Original strand, 6759 - 6823
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggt 145  Q
    ||||||||||||||||| |||||||||||| ||||||||||| |||||   ||||||||| ||||    
T  6759 taattcatggcttgggtatgcatgattcataatttgttgttgtgaaataagttgttgttgttggt 6823  T

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Target: scaffold0251 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 13602 - 13676
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatga-tttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||||||||||||||| |||||||||||| | |||||||||| |||||   ||||||||| |||||| ||||||    
T  13602 taattcatggcttgggtatgcatgattcataattttgttgttgtgaaataagttgttgttgttggtttggtgaaa 13676  T

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Target: scaffold0251; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 21576 - 21650
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatga-tttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||||||||||||||| |||||||||||| | |||||||||| |||||   ||||||||| | |||| ||||||    
T  21576 taattcatggcttgggtatgcatgattcataattttgttgttgtgaaataagttgttgttgttagtttggtgaaa 21650  T

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Target: scaffold0234 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 147
Target Start/End: Original strand, 17620 - 17686
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttt 147  Q
    ||||||||||||||||| |||||||||||| || |||||||| |||||   ||||||||| ||||||    
T  17620 taattcatggcttgggtatgcatgattcataatatgttgttgtgaaataagttgttgttgttggttt 17686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 14988 - 14914
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatga-tttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||||||||||||||| |||||||||||| | |||||||||| |||||   ||||||||| |||||| ||||||    
T  14988 taattcatggcttgggtatgcatgattcataattttgttgttgtgaaataagttgttgttgttggtttggtgaaa 14914  T

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Target: scaffold0117 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 143
Target Start/End: Original strand, 11772 - 11837
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtg 143  Q
    ||||||||||||| ||||||||||||| |||||||||||| ||| ||||||||   |||||||||||    
T  11772 atgataattcatgacttgggtttgcataattcatgatttg-tgtggagaaatgagatgttgttggtg 11837  T

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Target: scaffold0004 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 193703 - 193777
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatga-tttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    ||||||||||||||||| |||||||||||| | |||||||||| |||||   ||||||||| |||||| ||||||    
T  193703 taattcatggcttgggtatgcatgattcataattttgttgttgcgaaataagttgttgttgttggtttcgtgaaa 193777  T

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Target: scaffold0004; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 128
Target Start/End: Original strand, 186741 - 186789
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatga-tttgttgttgagaaat 128  Q
    ||||||||||||||||| |||||||||||| | |||||||||| |||||    
T  186741 taattcatggcttgggtatgcatgattcataattttgttgttgtgaaat 186789  T

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Target: scaffold0162 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 167
Target Start/End: Original strand, 7230 - 7319
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaattggtgaattatg 167  Q
    |||| |||||||||||| || | ||| |||||||| |||||| |||||||||  ||||   || ||||||||| ||||||||||||||||    
T  7230 tgatgattcatggcttgagtgttcataattcatgaattgttgatgagaaatgagttgtgaatgatggttttgtaaaattggtgaattatg 7319  T

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Target: scaffold0080 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 155
Target Start/End: Original strand, 44003 - 44080
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaat 155  Q
    |||| ||||||||||||||| | ||| | |||||||||| || |||||||||  ||||||||| ||||||||| ||||    
T  44003 tgatgattcatggcttgggtgttcataaatcatgatttgatgatgagaaatgagttgttgttgttggttttgtaaaat 44080  T

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Target: scaffold0240 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 108
Target Start/End: Complemental strand, 7612 - 7581
Alignment:
Q  77 atgataattcatggcttgggtttgcatgattc 108  Q
    ||||||||||||||||||||||||||||||||    
T  7612 atgataattcatggcttgggtttgcatgattc 7581  T

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Target: scaffold0213 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 162
Target Start/End: Complemental strand, 29153 - 29122
Alignment:
Q  131 attgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||||||||||||||||||||||||||||||    
T  29153 attgttgttggtggttttgtgaaattggtgaa 29122  T

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Target: scaffold0107 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 162
Target Start/End: Complemental strand, 39636 - 39606
Alignment:
Q  132 ttgttgttggtggttttgtgaaattggtgaa 162  Q
    |||||||||||||||||||||||||||||||    
T  39636 ttgttgttggtggttttgtgaaattggtgaa 39606  T

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Target: scaffold0076 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 162
Target Start/End: Complemental strand, 39104 - 39063
Alignment:
Q  121 tgagaaatggattgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||||||  |||||||||| |||||||||||||||||||||    
T  39104 tgagaaataaattgttgttgatggttttgtgaaattggtgaa 39063  T

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Target: scaffold0023 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 154262 - 154303
Alignment:
Q  121 tgagaaatggattgttgttggtggttttgtgaaattggtgaa 162  Q
    ||||||||  ||||||| ||||||||||||||||||||||||    
T  154262 tgagaaataaattgttgatggtggttttgtgaaattggtgaa 154303  T

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Target: scaffold0970 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 2497 - 2421
Alignment:
Q  78 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaa 154  Q
    |||| ||||||||||||||| | ||| |||| | ||||| || ||||||||   ||||||||| |||||||||||||    
T  2497 tgatgattcatggcttgggtattcataattccttatttgatgatgagaaataagttgttgttgttggttttgtgaaa 2421  T

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Target: scaffold0303 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 145
Target Start/End: Original strand, 244 - 308
Alignment:
Q  81 taattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggt 145  Q
    |||||||||||||| || |||||||||||| |||| |||||| |||||   ||||||||| ||||    
T  244 taattcatggcttgagtatgcatgattcataatttattgttgtgaaataagttgttgttgttggt 308  T

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