View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10249_low_5 (Length: 241)
Name: NF10249_low_5
Description: NF10249
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10249_low_5 |
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Alignment Details
Target: chr3 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 29116826 - 29116602
Alignment:
| Q |
1 |
ttaagatcgagtatacaagttaacgtaacttattttcagctgtgcaacaatttattcaagaaaatcttactcacacatttaattcattacaaataagttg |
100 |
Q |
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| T |
29116826 |
ttaagatcgagtatacaagttaacataacttattttcagcggtgcaacaatttattcaagaaaatcttactcacacatttaattcattacaaataagttg |
29116727 |
T |
|
| Q |
101 |
tgtatttgttgcaaattgacaactgtttctatgttatcaataaaactattgttctgtcaactaccaagtgcaaatcatatgaaaagaactcctaactatc |
200 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
29116726 |
tgtatttgttgcaaaatgacaactgtttctatgttatcaataaaactattgttctgtcaactaccaagtgcaaatcatatgaaaagaactccaaactatc |
29116627 |
T |
|
| Q |
201 |
atgaaggcttttcacttaaactttt |
225 |
Q |
| |
|
||||||||||||||||||||||||| |
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| T |
29116626 |
atgaaggcttttcacttaaactttt |
29116602 |
T |
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