View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10253_low_4 (Length: 284)

Name: NF10253_low_4
Description: NF10253
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10253_low_4
NF10253_low_4
[»] chr4 (19 HSPs)
chr4 (102-284)||(19429569-19429751)
chr4 (7-114)||(19429763-19429870)
chr4 (29-124)||(3639099-3639194)
chr4 (205-280)||(4663781-4663856)
chr4 (204-278)||(3249801-3249875)
chr4 (20-93)||(1017103-1017176)
chr4 (192-284)||(46019707-46019799)
chr4 (175-231)||(4684243-4684299)
chr4 (17-112)||(28615391-28615485)
chr4 (16-130)||(22239470-22239584)
chr4 (20-74)||(46860012-46860066)
chr4 (213-284)||(4191657-4191729)
chr4 (17-130)||(7730638-7730750)
chr4 (29-114)||(21157822-21157907)
chr4 (240-284)||(23815314-23815359)
chr4 (40-85)||(51555712-51555757)
chr4 (61-114)||(56249578-56249631)
chr4 (61-105)||(13126538-13126582)
chr4 (17-85)||(25717676-25717744)
[»] chr3 (17 HSPs)
chr3 (16-130)||(21872213-21872327)
chr3 (15-111)||(24624267-24624363)
chr3 (225-284)||(3015930-3015988)
chr3 (204-272)||(16790181-16790249)
chr3 (183-279)||(54775016-54775112)
chr3 (105-145)||(21131537-21131577)
chr3 (17-93)||(25459549-25459625)
chr3 (201-275)||(27888693-27888768)
chr3 (17-75)||(26603286-26603344)
chr3 (219-284)||(38462205-38462270)
chr3 (107-168)||(52323929-52323990)
chr3 (174-277)||(905058-905161)
chr3 (196-232)||(21862309-21862345)
chr3 (102-130)||(24158531-24158559)
chr3 (242-278)||(32069097-32069133)
chr3 (17-85)||(45590734-45590802)
chr3 (113-170)||(49586975-49587034)
[»] scaffold0590 (1 HSPs)
scaffold0590 (180-280)||(1159-1259)
[»] scaffold0275 (1 HSPs)
scaffold0275 (180-280)||(2716-2816)
[»] chr6 (20 HSPs)
chr6 (182-284)||(32975865-32975967)
chr6 (180-284)||(3155061-3155165)
chr6 (51-114)||(32976032-32976095)
chr6 (40-130)||(27857396-27857486)
chr6 (183-279)||(5328862-5328958)
chr6 (190-235)||(24330013-24330058)
chr6 (196-284)||(34429771-34429859)
chr6 (174-277)||(21959607-21959710)
chr6 (39-95)||(34538159-34538215)
chr6 (36-111)||(33385586-33385661)
chr6 (179-284)||(9833178-9833283)
chr6 (203-284)||(31672549-31672630)
chr6 (242-280)||(32513771-32513809)
chr6 (29-86)||(24973958-24974015)
chr6 (102-147)||(32578014-32578059)
chr6 (204-284)||(33068642-33068722)
chr6 (47-111)||(283152-283216)
chr6 (53-129)||(4248973-4249049)
chr6 (240-284)||(11393831-11393875)
chr6 (225-284)||(24836280-24836339)
[»] chr8 (23 HSPs)
chr8 (182-279)||(34563137-34563234)
chr8 (17-79)||(37353091-37353153)
chr8 (183-282)||(39392744-39392843)
chr8 (18-85)||(4560585-4560652)
chr8 (23-93)||(2364385-2364455)
chr8 (17-130)||(10488501-10488614)
chr8 (40-85)||(13652299-13652344)
chr8 (40-85)||(13710942-13710987)
chr8 (17-129)||(4763933-4764045)
chr8 (15-130)||(34770906-34771021)
chr8 (242-284)||(40728499-40728542)
chr8 (182-283)||(787188-787289)
chr8 (169-274)||(4558672-4558777)
chr8 (15-92)||(2487925-2488002)
chr8 (191-283)||(29699150-29699242)
chr8 (196-261)||(31884495-31884559)
chr8 (30-95)||(31884872-31884937)
chr8 (40-129)||(31915235-31915324)
chr8 (207-239)||(10488404-10488436)
chr8 (191-239)||(12972752-12972800)
chr8 (27-79)||(39881650-39881702)
chr8 (173-284)||(41336726-41336837)
chr8 (27-95)||(43208085-43208153)
[»] chr2 (22 HSPs)
chr2 (19-125)||(28803451-28803557)
chr2 (174-237)||(11393494-11393557)
chr2 (174-237)||(11410155-11410218)
chr2 (214-284)||(35809852-35809921)
chr2 (203-284)||(42817457-42817538)
chr2 (17-114)||(18884921-18885018)
chr2 (182-278)||(31461325-31461421)
chr2 (184-284)||(35459799-35459899)
chr2 (18-111)||(43456627-43456720)
chr2 (191-239)||(17221666-17221714)
chr2 (200-284)||(29430661-29430744)
chr2 (180-284)||(18884766-18884871)
chr2 (17-75)||(7103392-7103450)
chr2 (219-284)||(10143096-10143161)
chr2 (175-284)||(15171130-15171239)
chr2 (191-284)||(33576675-33576768)
chr2 (180-222)||(37474656-37474698)
chr2 (29-95)||(42852633-42852699)
chr2 (17-75)||(43199928-43199986)
chr2 (182-255)||(15200440-15200512)
chr2 (18-58)||(31558833-31558873)
chr2 (191-278)||(38239638-38239725)
[»] chr1 (17 HSPs)
chr1 (180-283)||(23895221-23895324)
chr1 (17-92)||(23373232-23373307)
chr1 (17-75)||(6292585-6292643)
chr1 (228-284)||(15360827-15360883)
chr1 (17-74)||(24460320-24460377)
chr1 (103-152)||(26179464-26179513)
chr1 (202-284)||(4338555-4338638)
chr1 (39-79)||(15581343-15581383)
chr1 (180-239)||(29794048-29794107)
chr1 (102-170)||(46499902-46499972)
chr1 (180-239)||(49365914-49365973)
chr1 (17-103)||(33723301-33723387)
chr1 (19-92)||(5157148-5157221)
chr1 (247-284)||(24502916-24502953)
chr1 (169-222)||(29665890-29665943)
chr1 (180-220)||(5090757-5090797)
chr1 (210-284)||(49516984-49517059)
[»] chr5 (13 HSPs)
chr5 (203-281)||(6739780-6739858)
chr5 (15-130)||(38047796-38047911)
chr5 (17-114)||(14331421-14331517)
chr5 (180-272)||(26516183-26516275)
chr5 (122-170)||(16380639-16380686)
chr5 (201-280)||(35135747-35135826)
chr5 (203-277)||(20982223-20982297)
chr5 (242-284)||(33234308-33234350)
chr5 (102-147)||(36774735-36774778)
chr5 (17-65)||(17369306-17369354)
chr5 (245-284)||(29117011-29117051)
chr5 (102-130)||(30217096-30217124)
chr5 (27-95)||(38033956-38034024)
[»] scaffold0024 (1 HSPs)
scaffold0024 (203-284)||(27484-27565)
[»] chr7 (8 HSPs)
chr7 (15-116)||(23214907-23215008)
chr7 (16-93)||(30751594-30751671)
chr7 (17-73)||(29363603-29363659)
chr7 (184-278)||(49060429-49060523)
chr7 (203-284)||(27481375-27481456)
chr7 (203-280)||(47003995-47004072)
chr7 (203-278)||(1431395-1431470)
chr7 (39-95)||(31002822-31002878)


Alignment Details
Target: chr4 (Bit Score: 175; Significance: 3e-94; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 102 - 284
Target Start/End: Complemental strand, 19429751 - 19429569
Alignment:
Q  102 atttccataagctctccaggatagcttatatcaaaacaatttgactattttatcttatattatagaaatgggcttgtatggataaatagcttagttaagc 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19429751 atttccataagctctccaggatagcttatatcaaaacaatttgactattttatcttatattatagaaatgggcttgtatggataaatagcttagttaagc 19429652  T
Q  202 acttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatgacaaagataaaataaagtcaaactgttt 284  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  19429651 acttatagcataagcgtttatcggataagtgtttatgttttaagttatttcgatgacaaagataaaataaagtcaaactgttt 19429569  T

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Target: chr4; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 7 - 114
Target Start/End: Complemental strand, 19429870 - 19429763
Alignment:
Q  7 atggacatcatgtttggatcgacttattagaacttatctactcacataagcacatgtgagattgtttggaagatcttataaaaacagctcattacatttc 106  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |    
T  19429870 atggacatcatgtttggatcgacttatttgaacttatctactcgcataagcacatgtgagattgtttggaagatcttacaaaaacagctcattacattgc 19429771  T
Q  107 cataagct 114  Q
    ||||||||    
T  19429770 cataagct 19429763  T

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Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 124
Target Start/End: Original strand, 3639099 - 3639194
Alignment:
Q  29 cttattagaacttatctactcacataagcacatgtgagattgtttggaagatcttataaaaacagctcattacatttccataagctctccaggata 124  Q
    |||||| || |||||||||  |||||||||| ||||||||| ||||||||| || ||| |||||||| || |||  ||||||||||||||| ||||    
T  3639099 cttatttgagcttatctaccgacataagcacctgtgagattatttggaagagctgatagaaacagcttatgacaagtccataagctctccaagata 3639194  T

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Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 205 - 280
Target Start/End: Complemental strand, 4663856 - 4663781
Alignment:
Q  205 tatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatgacaaag-ataaaataaagtcaaact 280  Q
    ||||||||| |||||||||||||||||| ||||| | |||||||||||||| |||||| ||||||| ||| ||||||    
T  4663856 tatagcatatgcgtttatcgtataagtgcttatg-tataagttatttctataacaaagaataaaatgaagccaaact 4663781  T

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Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 3249875 - 3249801
Alignment:
Q  204 ttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatga-caaagataaaataaagtcaaa 278  Q
    |||||||||||||| ||||| ||||||||| |||| | ||||||||||||||||  |||||| |||||||||||||    
T  3249875 ttatagcataagcgcttatcatataagtgtgtatg-tgtaagttatttctatgataaaagatgaaataaagtcaaa 3249801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 1017176 - 1017103
Alignment:
Q  20 ttggatcgacttattagaacttatctactcacataagcacatgtgagattgtttggaagatcttataaaaacag 93  Q
    |||||| |||||||| || || ||||||| |||||| ||| ||||||| ||||||||||| |||||| ||||||    
T  1017176 ttggattgacttatttgagctaatctactgacataaacacttgtgagactgtttggaagaacttatagaaacag 1017103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 284
Target Start/End: Complemental strand, 46019799 - 46019707
Alignment:
Q  192 ttagttaagcacttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatgac-aaagataaaataaagtcaaactgttt 284  Q
    |||||||||||||||||| ||||||| | ||  |||||||||||||| | |||| ||||||||  || ||||| ||||||||| ||||||||||    
T  46019799 ttagttaagcacttatagtataagcgataattatataagtgtttatg-tgtaagctatttctagaacaaaagaaaaaataaagccaaactgttt 46019707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 4684299 - 4684243
Alignment:
Q  175 ttgtatggataaatagcttagttaagcacttatagcataagcgtttatcgtataagt 231  Q
    |||| ||||||||||||||| |||||||||| || |||||| ||||||| |||||||    
T  4684299 ttgtttggataaatagcttaattaagcacttctatcataagtgtttatcatataagt 4684243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 28615485 - 28615391
Alignment:
Q  17 tgtttggatcgacttattagaacttatctactcacataagcacatgtgagattgtttggaagatcttataaaaacagctcattacatttccataag 112  Q
    ||||||||| ||||||||  |  |||||||||  ||||| ||| ||||||||||||||| ||| ||||| ||||||||| || |||||| ||||||    
T  28615485 tgtttggattgacttatttaagtttatctactagcataaacacttgtgagattgtttgg-agaacttatgaaaacagctaatgacattttcataag 28615391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 22239470 - 22239584
Alignment:
Q  16 atgtttggatcgacttattagaacttatctactcacataagcacatgtgagattgtttggaagatcttataaaaacagctcattacatttccataagctc 115  Q
    ||||| |||| || ||||| ||||||||||||| ||| |||||| ||||||| | |||| ||||   || | |||||||| || | || ||  |||||||    
T  22239470 atgttaggattgaattattcgaacttatctactgacacaagcacttgtgagactatttgaaagagtgtagataaacagcttatgaaatgtctttaagctc 22239569  T
Q  116 tccaggatagcttat 130  Q
    |||||||||||||||    
T  22239570 tccaggatagcttat 22239584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 46860066 - 46860012
Alignment:
Q  20 ttggatcgacttattagaacttatctactcacataagcacatgtgagattgtttg 74  Q
    |||||| |||||||| ||||||||||| |||||||||||| ||||| | ||||||    
T  46860066 ttggattgacttatttgaacttatctattcacataagcacttgtgaaactgtttg 46860012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 284
Target Start/End: Original strand, 4191657 - 4191729
Alignment:
Q  213 aagcgtttatcgtataagtgtttatgttttaagttatttctatgacaaa-gataaaa-taaagtcaaactgttt 284  Q
    ||||||||||| |||||||| |||||| | ||| ||||||||| ||||| ||||||| ||||||||||||||||    
T  4191657 aagcgtttatcatataagtgcttatgtat-aagctatttctataacaaaagataaaaataaagtcaaactgttt 4191729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 7730750 - 7730638
Alignment:
Q  17 tgtttggatcgacttattagaacttatctactcacataagcacatgtgagattgtttggaagatcttataaaaacagctcattacatttccataagctct 116  Q
    |||||||||||||||||| || || ||||| | |||||| |||  |||||| | ||| | ||| ||||   ||||| || || |||| ||||||||||||    
T  7730750 tgtttggatcgacttatttgagct-atctaatgacataaacacgcgtgagactattttggagagcttaaggaaacaacttatgacatgtccataagctct 7730652  T
Q  117 ccaggatagcttat 130  Q
    ||||||||||||||    
T  7730651 ccaggatagcttat 7730638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 21157907 - 21157822
Alignment:
Q  29 cttattagaacttatctactcacataagcacatgtgagattgtttggaagatcttataaaaacagctcattacatttccataagct 114  Q
    |||||| || || ||||||| |||||||||| ||| ||| ||||||||||| |||| | |||||||| || |||||| || |||||    
T  21157907 cttatttgagctcatctactgacataagcacttgtaagactgtttggaagagcttacagaaacagcttatgacatttacaaaagct 21157822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 284
Target Start/End: Original strand, 23815314 - 23815359
Alignment:
Q  240 tttaagttatttctatgacaaa-gataaaataaagtcaaactgttt 284  Q
    |||||||||||||||| ||||| |||||||||| ||||||||||||    
T  23815314 tttaagttatttctataacaaaagataaaataatgtcaaactgttt 23815359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 51555712 - 51555757
Alignment:
Q  40 ttatctactcacataagcacatgtgagattgtttggaagatcttat 85  Q
    |||||||||||||||||||| | ||||||||||| ||||| |||||    
T  51555712 ttatctactcacataagcacttatgagattgtttagaagagcttat 51555757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 56249631 - 56249578
Alignment:
Q  61 tgtgagattgtttggaagatcttataaaaacagctcattacatttccataagct 114  Q
    ||||||||||||||||| | ||||| ||||||||| || |||||| ||||||||    
T  56249631 tgtgagattgtttggaacaacttatcaaaacagcttatgacattttcataagct 56249578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 13126538 - 13126582
Alignment:
Q  61 tgtgagattgtttggaagatcttataaaaacagctcattacattt 105  Q
    ||||||| ||||||||||| ||||||||||||||| || ||||||    
T  13126538 tgtgagactgtttggaagaacttataaaaacagcttatgacattt 13126582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 25717744 - 25717676
Alignment:
Q  17 tgtttggatcgacttattagaacttatctactcacataagcacatgtgagattgtttggaagatcttat 85  Q
    ||||||||| | |||||| || ||||| |||  |||||||||| ||||| ||||||||||||| |||||    
T  25717744 tgtttggattgtcttatttgagcttatgtaccgacataagcacttgtgaaattgtttggaagagcttat 25717676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 7e-18; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 21872213 - 21872327
Alignment:
Q  16 atgtttggatcgacttattagaacttatctactcacataagcacatgtgagattgtttggaagatcttataaaaacagctcattacatttccataagctc 115  Q
    ||||||||||  ||||||| || |||||||||| |||||||||| ||||||| ||||||||| | ||| | |||| |||| || |||| ||||||| ||     
T  21872213 atgtttggattaacttatttgatcttatctactgacataagcacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccataaactt 21872312  T
Q  116 tccaggatagcttat 130  Q
    |||||||||||||||    
T  21872313 tccaggatagcttat 21872327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 111
Target Start/End: Complemental strand, 24624363 - 24624267
Alignment:
Q  15 catgtttggatcgacttattagaacttatctactcacataagcacatgtgagattgtttggaagatcttataaaaacagctcattacatttccataa 111  Q
    ||||| ||||| | |||| | |||||||||||||||||| ||||| ||| ||| ||||||||||| ||||| ||||||||| || |||| |||||||    
T  24624363 catgtgtggattggcttagttgaacttatctactcacattagcacttgtaagactgtttggaagagcttatgaaaacagcttatgacatgtccataa 24624267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 284
Target Start/End: Complemental strand, 3015988 - 3015930
Alignment:
Q  225 tataagtgtttatgttttaagttatttctatgacaaagataaaataaagtcaaactgttt 284  Q
    |||||||| |||||| |||| |||||||||| ||||||||||||| ||||||||||||||    
T  3015988 tataagtgcttatgtattaa-ttatttctataacaaagataaaatgaagtcaaactgttt 3015930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 272
Target Start/End: Complemental strand, 16790249 - 16790181
Alignment:
Q  204 ttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatgac-aaagataaaataaa 272  Q
    |||||||||||||||||||| |||||||| ||||  | |||||||||||||| || ||||||||||||||    
T  16790249 ttatagcataagcgtttatcatataagtgcttat-atataagttatttctataacaaaagataaaataaa 16790181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 279
Target Start/End: Original strand, 54775016 - 54775112
Alignment:
Q  183 ataaatagcttagttaagcacttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatgacaaa-gataaaataaagtcaaac 279  Q
    ||||| |||||| |||| ||| ||||||||||  | ||||| || ||||| ||| |||| ||||||||||||| ||||| ||||||||||||||||||    
T  54775016 ataaacagcttaattaaccacatatagcataaatgattatcataaaagtgcttacgttt-aagttatttctataacaaaagataaaataaagtcaaac 54775112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 145
Target Start/End: Original strand, 21131537 - 21131577
Alignment:
Q  105 tccataagctctccaggatagcttatatcaaaacaatttga 145  Q
    ||||||||||||||| |||||||||||||||||| ||||||    
T  21131537 tccataagctctccaagatagcttatatcaaaaccatttga 21131577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 25459549 - 25459625
Alignment:
Q  17 tgtttggatcgacttattagaacttatctactcacataagcacatgtgagattgtttggaagatcttataaaaacag 93  Q
    ||||||||| || ||||| || |||||| |||  ||||||||| ||||||||||||||||||| |||| | ||||||    
T  25459549 tgtttggattgatttatttgagcttatcaactagcataagcacttgtgagattgtttggaagagcttagagaaacag 25459625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 275
Target Start/End: Complemental strand, 27888768 - 27888693
Alignment:
Q  201 cacttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatgac-aaagataaaataaagtc 275  Q
    ||||||||||||||||||||||| ||||| | |||||||  || | ||||| ||| || |||||||||||||||||    
T  27888768 cacttatagcataagcgtttatcatataattatttatgtaataggctatttgtataacaaaagataaaataaagtc 27888693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 26603344 - 26603286
Alignment:
Q  17 tgtttggatcgacttattagaacttatctactcacataagcacatgtgagattgtttgg 75  Q
    ||||||||| |||| ||| ||| ||| |||||  |||||||||||||||||||||||||    
T  26603344 tgtttggattgactgatttgaatttacctactgtcataagcacatgtgagattgtttgg 26603286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 38462205 - 38462270
Alignment:
Q  219 ttatcgtataagtgtttatgttttaagttatttctatgacaaa-gataaaataaagtcaaactgttt 284  Q
    ||||| ||||||||||||| || |||| |||||||||  |||| |||||||||||||||||||||||    
T  38462205 ttatcatataagtgtttat-ttataagctatttctataccaaaagataaaataaagtcaaactgttt 38462270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 168
Target Start/End: Original strand, 52323929 - 52323990
Alignment:
Q  107 cataagctctccaggatagcttatatcaaaacaatttgac--tattttatcttatattatagaa 168  Q
    ||||||||||||| |||||||  |||||||||||||||||  ||||||||||| ||| ||||||    
T  52323929 cataagctctccaagatagct--tatcaaaacaatttgaccttattttatcttttatcatagaa 52323990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 277
Target Start/End: Complemental strand, 905161 - 905058
Alignment:
Q  174 cttgtatggataaatagcttagttaagcacttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatgac-aaagataaaataaa 272  Q
    ||||| || ||||||||||||  ||||| ||| |||||||||| | |||| |||||| | ||| | | |||| ||||||||| || ||||||||||||||    
T  905161 cttgtttgcataaatagcttaagtaagcgcttttagcataagcctatatcatataagcgcttaag-tataagctatttctataacaaaagataaaataaa 905063  T
Q  273 gtcaa 277  Q
    |||||    
T  905062 gtcaa 905058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 232
Target Start/End: Complemental strand, 21862345 - 21862309
Alignment:
Q  196 ttaagcacttatagcataagcgtttatcgtataagtg 232  Q
    ||||||||||||||||||| |||||||| ||||||||    
T  21862345 ttaagcacttatagcataaacgtttatcttataagtg 21862309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 130
Target Start/End: Original strand, 24158531 - 24158559
Alignment:
Q  102 atttccataagctctccaggatagcttat 130  Q
    |||||||||||||||||||||||||||||    
T  24158531 atttccataagctctccaggatagcttat 24158559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 32069097 - 32069133
Alignment:
Q  242 taagttatttctatgacaaagataaaataaagtcaaa 278  Q
    |||||||||||||| | ||||||||||||||||||||    
T  32069097 taagttatttctataaaaaagataaaataaagtcaaa 32069133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 45590802 - 45590734
Alignment:
Q  17 tgtttggatcgacttattagaacttatctactcacataagcacatgtgagattgtttggaagatcttat 85  Q
    |||||| || ||||| || |||||||||||||  ||||||||| ||||||| ||||||| ||| |||||    
T  45590802 tgtttgaattgacttttttgaacttatctactagcataagcacttgtgagactgtttgggagagcttat 45590734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 170
Target Start/End: Original strand, 49586975 - 49587034
Alignment:
Q  113 ctctccaggatagcttatatcaaaacaatttgac--tattttatcttatattatagaaat 170  Q
    ||||||| |||||||||||| |||||| ||||||  ||||||||||| | ||||||||||    
T  49586975 ctctccaagatagcttatatgaaaacagtttgactttattttatcttttgttatagaaat 49587034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 280
Target Start/End: Complemental strand, 1259 - 1159
Alignment:
Q  180 tggataaatagcttagttaagcacttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatgac-aaagataaaataaagtcaaa 278  Q
    |||||||| | |||| ||||| ||||||||||||| ||| |||| |||||||| ||||| | |||| ||||||||| || ||||||||||||||||||||    
T  1259 tggataaacaacttaattaagtacttatagcataaacgtctatcatataagtgcttatg-tataagctatttctataacaaaagataaaataaagtcaaa 1161  T
Q  279 ct 280  Q
    ||    
T  1160 ct 1159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 280
Target Start/End: Original strand, 2716 - 2816
Alignment:
Q  180 tggataaatagcttagttaagcacttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatgac-aaagataaaataaagtcaaa 278  Q
    |||||||| | |||| ||||| ||||||||||||| ||| |||| |||||||| ||||| | |||| ||||||||| || ||||||||||||||||||||    
T  2716 tggataaacaacttaattaagtacttatagcataaacgtctatcatataagtgcttatg-tataagctatttctataacaaaagataaaataaagtcaaa 2814  T
Q  279 ct 280  Q
    ||    
T  2815 ct 2816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 284
Target Start/End: Original strand, 32975865 - 32975967
Alignment:
Q  182 gataaatagcttagttaagcacttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatgac-aaagataaaataaagtcaaact 280  Q
    |||||| | |||| ||||||  |||||||||||||| || || |||||||||||||| | |||||||||||| | || ||| ||||||||||||||||||    
T  32975865 gataaacaacttaattaagcgtttatagcataagcgcttctcatataagtgtttatg-tataagttatttctgtaacaaaatataaaataaagtcaaact 32975963  T
Q  281 gttt 284  Q
    ||||    
T  32975964 gttt 32975967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 284
Target Start/End: Original strand, 3155061 - 3155165
Alignment:
Q  180 tggataaatagcttagttaagcacttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatgac-aaagataaaataaagtcaaa 278  Q
    |||||||| | |||| |||||| ||||||||||||||||||||| ||||| || ||||| | |||| ||| ||| | || |||||||||| |||||||||    
T  3155061 tggataaacaacttatttaagcgcttatagcataagcgtttatcatataaatggttatg-tataagctatctcttttacaaaagataaaacaaagtcaaa 3155159  T
Q  279 ctgttt 284  Q
    ||||||    
T  3155160 ctgttt 3155165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 114
Target Start/End: Complemental strand, 32976095 - 32976032
Alignment:
Q  51 cataagcacatgtgagattgtttggaagatcttataaaaacagctcattacatttccataagct 114  Q
    |||||| || ||||||| ||||||||||| |||||| |||||||| || |||||||||||||||    
T  32976095 cataagtacttgtgagactgtttggaagagcttatagaaacagcttatgacatttccataagct 32976032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 27857486 - 27857396
Alignment:
Q  40 ttatctactcacataagcacatgtgagattgtttggaagatcttataaaaacagctcattacatttccataagctctccaggatagcttat 130  Q
    ||||||||| |||||  ||| ||||| | ||||||| ||| ||||| |||||| || || |||| ||||||||||||||| ||||||||||    
T  27857486 ttatctactgacatagacacttgtgaaactgtttgggagagcttatgaaaacaacttatgacatctccataagctctccatgatagcttat 27857396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 279
Target Start/End: Original strand, 5328862 - 5328958
Alignment:
Q  183 ataaatagcttagttaagcacttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatgacaaa-gataaaataaagtcaaac 279  Q
    ||||| |||||| |||| ||| ||||||||||  | ||||| || ||||| ||| |||| ||||||||||||| ||||| ||||||||||||||||||    
T  5328862 ataaacagcttaattaaccacatatagcataaatgattatcataaaagtgcttacgttt-aagttatttctataacaaaagataaaataaagtcaaac 5328958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 24330058 - 24330013
Alignment:
Q  190 gcttagttaagcacttatagcataagcgtttatcgtataagtgttt 235  Q
    ||||| ||||||||||||||||||| | ||||||||||||||||||    
T  24330058 gcttaattaagcacttatagcataaacatttatcgtataagtgttt 24330013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 284
Target Start/End: Complemental strand, 34429859 - 34429771
Alignment:
Q  196 ttaagcacttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatgacaa-agataaaataaagtcaaactgttt 284  Q
    |||| ||||||||||||||| |||||| |||  |||| |||||| | ||||||||||||| | || ||||||||||||||| ||||||||    
T  34429859 ttaatcacttatagcataagtgtttattgtactagtgattatgtat-aagttatttctataataagagataaaataaagtctaactgttt 34429771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 277
Target Start/End: Original strand, 21959607 - 21959710
Alignment:
Q  174 cttgtatggataaatagcttagttaagcacttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatgac-aaagataaaataaa 272  Q
    ||||| || ||||||||||||  ||||||||| |||||||||| |||||| || ||||| ||| | | |||| |||||| || || ||||||||||||||    
T  21959607 cttgtttgcataaatagcttacgtaagcacttttagcataagcctttatcatagaagtgcttaag-tataagctatttccataacaaaagataaaataaa 21959705  T
Q  273 gtcaa 277  Q
    |||||    
T  21959706 gtcaa 21959710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 34538159 - 34538215
Alignment:
Q  39 cttatctactcacataagcacatgtgagattgtttggaagatcttataaaaacagct 95  Q
    |||||||||||| |||||||| ||||||| | ||||  |||||||||||||||||||    
T  34538159 cttatctactcatataagcacttgtgagactatttgagagatcttataaaaacagct 34538215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 111
Target Start/End: Complemental strand, 33385661 - 33385586
Alignment:
Q  36 gaacttatctactcacataagcacatgtgagattgtttggaagatcttataaaaacagctcattacatttccataa 111  Q
    ||||||||||||| | |||||||| ||||| | |||||||||||  ||||  ||||||||||| |||| |||||||    
T  33385661 gaacttatctactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 33385586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 284
Target Start/End: Complemental strand, 9833283 - 9833178
Alignment:
Q  179 atggataaatagcttagttaagcacttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatgacaa-agataaaataaagtcaa 277  Q
    ||||||||| | |||| |||||   ||||| |||||||||||||| |||||||| || | | | ||| ||||||||| |||| | |||||||||||||||    
T  9833283 atggataaacaacttaattaagtgtttataacataagcgtttatcatataagtgcttctctat-aagatatttctattacaataaataaaataaagtcaa 9833185  T
Q  278 actgttt 284  Q
    |||||||    
T  9833184 actgttt 9833178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 284
Target Start/End: Complemental strand, 31672630 - 31672549
Alignment:
Q  203 cttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatgacaaaga-taaaataaagtcaaactgttt 284  Q
    |||||||| |||||| ||||| || |||||||||||| | || | ||||| |||||||| | |||||||||||||||||||||    
T  31672630 cttatagcttaagcgattatcatacaagtgtttatgtataaact-atttccatgacaaaaaataaaataaagtcaaactgttt 31672549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 280
Target Start/End: Original strand, 32513771 - 32513809
Alignment:
Q  242 taagttatttctatgacaaagataaaataaagtcaaact 280  Q
    |||||||||||||| ||||| ||||||||||||||||||    
T  32513771 taagttatttctataacaaaaataaaataaagtcaaact 32513809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 24973958 - 24974015
Alignment:
Q  29 cttattagaacttatctactcacataagcacatgtgagattgtttggaagatcttata 86  Q
    |||||| |||||||||| || |||||||||| ||| ||||||||||| ||| ||||||    
T  24973958 cttatttgaacttatctgctgacataagcacttgtaagattgtttggtagagcttata 24974015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 32578014 - 32578059
Alignment:
Q  102 atttccataagctctccaggatagcttatatcaaaacaatttgact 147  Q
    ||||||||| ||||| ||||||||||||||| | ||||||||||||    
T  32578014 atttccatatgctcttcaggatagcttatatgagaacaatttgact 32578059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 284
Target Start/End: Complemental strand, 33068722 - 33068642
Alignment:
Q  204 ttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatgacaaa-gataaaataaagtcaaactgttt 284  Q
    |||||||||||||| |||||  |||| || |||||| | ||||||||||||| ||||| ||||||||||  |||||||||||    
T  33068722 ttatagcataagcgcttatcaaataaatgcttatgtat-aagttatttctataacaaaagataaaataatatcaaactgttt 33068642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 283216 - 283152
Alignment:
Q  47 ctcacataagcacatgtgagattgtttggaagatcttataaaaacagctcattacatttccataa 111  Q
    ||||||||||||| ||||| | |||||||| || | ||||||||||||| || |||| |||||||    
T  283216 ctcacataagcacttgtgaaactgtttggaggaacgtataaaaacagcttatgacatgtccataa 283152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 129
Target Start/End: Complemental strand, 4249049 - 4248973
Alignment:
Q  53 taagcacatgtgagattgtttggaagatcttataaaaacagctcattacatttccataagctctccaggatagctta 129  Q
    ||||||| ||||| ||||||| ||||| ||||| |||||| || ||  ||| ||||||||||||||  |||||||||    
T  4249049 taagcacttgtgaaattgttttgaagagcttatgaaaacaccttatggcatgtccataagctctccgagatagctta 4248973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 284
Target Start/End: Original strand, 11393831 - 11393875
Alignment:
Q  240 tttaagttatttctatgacaaagataaaataaagtcaaactgttt 284  Q
    |||||||||||| ||||  |||||||||||||| |||||||||||    
T  11393831 tttaagttatttttatgcaaaagataaaataaaatcaaactgttt 11393875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 284
Target Start/End: Complemental strand, 24836339 - 24836280
Alignment:
Q  225 tataagtgtttatgttttaagttatttctatgacaaa-gataaaataaagtcaaactgttt 284  Q
    ||||||| ||||||| | ||||||||||||| ||||| ||||||||||||||||| |||||    
T  24836339 tataagtatttatgtat-aagttatttctataacaaaagataaaataaagtcaaattgttt 24836280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 279
Target Start/End: Original strand, 34563137 - 34563234
Alignment:
Q  182 gataaatagcttagttaagcacttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatgacaaa-gataaaataaagtcaaac 279  Q
    |||||| | |||| |||| | |||||||||||| | |||||| |||||||| |||| | | ||||||||||||||||||| ||||||||||||||||||    
T  34563137 gataaacaacttaattaaacgcttatagcataaacatttatcatataagtgcttatatat-aagttatttctatgacaaaggataaaataaagtcaaac 34563234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 37353091 - 37353153
Alignment:
Q  17 tgtttggatcgacttattagaacttatctactcacataagcacatgtgagattgtttggaaga 79  Q
    |||||||||||||||||  |||| |||||||| |||||||||| ||||||| |||||||||||    
T  37353091 tgtttggatcgacttatctgaacctatctactgacataagcacttgtgagactgtttggaaga 37353153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 282
Target Start/End: Complemental strand, 39392843 - 39392744
Alignment:
Q  183 ataaatagcttagttaagcacttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatgac-aaagataaaataaagtcaaactg 281  Q
    ||||||| |||| ||||||| |||||||||||| | ||||| ||||||||  |||| | |||  ||||||||| || |||||||||||||||||||||||    
T  39392843 ataaataacttaattaagcatttatagcataagtgcttatcatataagtggctatg-tataaactatttctataacaaaagataaaataaagtcaaactg 39392745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 4560652 - 4560585
Alignment:
Q  18 gtttggatcgacttattagaacttatctactcacataagcacatgtgagattgtttggaagatcttat 85  Q
    |||||||| |||||||| || |||||||| | |||||||||| |||||| |||||||||||| |||||    
T  4560652 gtttggattgacttatttgagcttatctattgacataagcacttgtgaggttgtttggaagaacttat 4560585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 2364385 - 2364455
Alignment:
Q  23 gatcgacttattagaacttatctactcacataagcacatgtgagattgtttggaagatcttataaaaacag 93  Q
    |||||||||||| |||||||||| || ||||||| || ||||||| |||||||||||  |||| |||||||    
T  2364385 gatcgacttatttgaacttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 2364455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 10488614 - 10488501
Alignment:
Q  17 tgtttggatcgacttattagaacttatctactcacataagcacatgtgagattgtttggaagatcttataaaaacagctcattacatttccataagctct 116  Q
    ||||||||| | |||||| || |||||| ||| |||||| ||||||||||| |||| |||||| | || | |||||||| ||  |||  ||||||||||     
T  10488614 tgtttggattggcttatttgagcttatcaactaacataaacacatgtgagactgttcggaagagcatacagaaacagcttatggcatgaccataagctca 10488515  T
Q  117 ccaggatagcttat 130  Q
    ||||||||| ||||    
T  10488514 ccaggatagtttat 10488501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 13652344 - 13652299
Alignment:
Q  40 ttatctactcacataagcacatgtgagattgtttggaagatcttat 85  Q
    |||||||||||||||||||| |||||| |||||||||||| |||||    
T  13652344 ttatctactcacataagcacttgtgaggttgtttggaagagcttat 13652299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 13710987 - 13710942
Alignment:
Q  40 ttatctactcacataagcacatgtgagattgtttggaagatcttat 85  Q
    |||||||||||||||||||| |||||| |||||||||||| |||||    
T  13710987 ttatctactcacataagcacttgtgaggttgtttggaagagcttat 13710942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 129
Target Start/End: Complemental strand, 4764045 - 4763933
Alignment:
Q  17 tgtttggatcgacttattagaacttatctactcacataagcacatgtgagattgtttggaagatcttataaaaacagctcattacatttccataagctct 116  Q
    ||||||||| |||||||| ||||||||| |||  ||||||||| | ||||| | |||   ||| ||| | |||||| || || |||| ||||||||||||    
T  4764045 tgtttggattgacttatttgaacttatccactagcataagcacctatgagactatttaagagagcttttgaaaacatctaatgacatgtccataagctct 4763946  T
Q  117 ccaggatagctta 129  Q
     ||||||||||||    
T  4763945 tcaggatagctta 4763933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 34771021 - 34770906
Alignment:
Q  15 catgtttggatcgacttattagaacttatctactcacataagcacatgtgagattgtttggaagatcttataaaaacagctcattacatttccataagct 114  Q
    ||||||||| | |||||||| ||  |||||| ||  ||||||||| ||||| | ||||||  ||||| ||| ||||||||| || |||| ||||| | ||    
T  34771021 catgtttggtttgacttatttgagtttatctgctagcataagcacttgtgaaactgtttgagagatcctatgaaaacagcttatgacatgtccatgaact 34770922  T
Q  115 ctccaggatagcttat 130  Q
    ||| ||||||||||||    
T  34770921 ctctaggatagcttat 34770906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 284
Target Start/End: Complemental strand, 40728542 - 40728499
Alignment:
Q  242 taagttatttctatgacaaa-gataaaataaagtcaaactgttt 284  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  40728542 taagttatttctataacaaaagataaaataaagtcaaactgttt 40728499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 283
Target Start/End: Complemental strand, 787289 - 787188
Alignment:
Q  182 gataaatagcttagttaagcacttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatgaca-aagataaaataaagtcaaact 280  Q
    |||||||| || | |||||||||||||||||||  ||||||| | |||||| |||||||| ||| | ||||  | ||| ||||||||||||||||||| |    
T  787289 gataaataactcaattaagcacttatagcataaatgtttatcatctaagtgcttatgttt-aagctgtttccgtaacataagataaaataaagtcaaatt 787191  T
Q  281 gtt 283  Q
    |||    
T  787190 gtt 787188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 274
Target Start/End: Original strand, 4558672 - 4558777
Alignment:
Q  169 atgggcttgtatggataaatagcttagttaagcacttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatga-caaagataaa 267  Q
    |||| ||||| |||||||| | |||| ||| || |||||||||||| |||||||  | |||||||||||| | |||| ||||||||| |  |||||||||    
T  4558672 atggtcttgtttggataaacaacttaattacgcgcttatagcataaacgtttattatgtaagtgtttatg-tataagctatttctataataaaagataaa 4558770  T
Q  268 ataaagt 274  Q
    |||||||    
T  4558771 ataaagt 4558777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 2487925 - 2488002
Alignment:
Q  15 catgtttggatcgacttattagaacttatctactcacataagcacatgtgagattgtttggaagatcttataaaaaca 92  Q
    ||||||||||| | |||||| ||  | ||||||| |||||||||| ||||||| ||||||| ||| ||||| ||||||    
T  2487925 catgtttggattggcttatttgagttcatctactgacataagcacttgtgagactgtttgggagaacttatgaaaaca 2488002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 283
Target Start/End: Original strand, 29699150 - 29699242
Alignment:
Q  191 cttagttaagcacttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatgacaaa-gataaaataaagtcaaactgtt 283  Q
    ||||||||||  ||||||||||||   |||||| ||||| || ||||||   ||||||||||||| ||||| ||||||||||||||||| ||||    
T  29699150 cttagttaagtgcttatagcataaatatttatcatataaatgcttatgtac-aagttatttctataacaaaagataaaataaagtcaaaatgtt 29699242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 31884495 - 31884559
Alignment:
Q  196 ttaagcacttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatgacaaa 261  Q
    |||||||||||||||||||||| ||||| || |||||  |||| | |||||||||||||| |||||    
T  31884495 ttaagcacttatagcataagcgcttatcatacaagtgcatatg-tataagttatttctataacaaa 31884559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 31884872 - 31884937
Alignment:
Q  30 ttattagaacttatctactcacataagcacatgtgagattgtttggaagatcttataaaaacagct 95  Q
    ||||| || ||||||||||  ||||||||| ||||||| ||||||| | | |||||||||||||||    
T  31884872 ttatttgagcttatctactagcataagcacttgtgagagtgtttgggaaaacttataaaaacagct 31884937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 31915235 - 31915324
Alignment:
Q  40 ttatctactcacataagcacatgtgagattgtttggaagatcttataaaaacagctcattacatttccataagctctccaggatagctta 129  Q
    ||||||| ||||||||  || ||||||| ||||||  | | |||||| ||||| || || |||  |||||||||||||||||||||||||    
T  31915235 ttatctattcacataaatacttgtgagactgtttgagaaagcttatacaaacaacttatgacaagtccataagctctccaggatagctta 31915324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 239
Target Start/End: Original strand, 10488404 - 10488436
Alignment:
Q  207 tagcataagcgtttatcgtataagtgtttatgt 239  Q
    ||||||||||||||||| |||||||||||||||    
T  10488404 tagcataagcgtttatcatataagtgtttatgt 10488436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 12972752 - 12972800
Alignment:
Q  191 cttagttaagcacttatagcataagcgtttatcgtataagtgtttatgt 239  Q
    |||| |||||| |||||||||||||| |||||| |||||||| ||||||    
T  12972752 cttaattaagcgcttatagcataagcatttatcatataagtgcttatgt 12972800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 39881650 - 39881702
Alignment:
Q  27 gacttattagaacttatctactcacataagcacatgtgagattgtttggaaga 79  Q
    |||||||| ||||||||||| |  ||||| ||| |||||||||||||||||||    
T  39881650 gacttatttgaacttatctattggcataaacacttgtgagattgtttggaaga 39881702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 284
Target Start/End: Complemental strand, 41336837 - 41336726
Alignment:
Q  173 gcttgtatggataaatagcttagttaagcacttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatgac-aaagataaaataa 271  Q
    |||||| |||||||| | |||| ||||   |||||||||||||||||||||  |||| || ||||| | ||| | |||| |||||| ||||||||||||     
T  41336837 gcttgtttggataaacaacttaattaattgcttatagcataagcgtttatcaaataaatgcttatg-tataaatcatttttatgacaaaagataaaatat 41336739  T
Q  272 agtcaaactgttt 284  Q
    ||||||| |||||    
T  41336738 agtcaaattgttt 41336726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 43208085 - 43208153
Alignment:
Q  27 gacttattagaacttatctactcacataagcacatgtgagattgtttggaagatcttataaaaacagct 95  Q
    |||||||| ||||||||||||| |||||  |||   ||||| |||||| |||| |||||||||||||||    
T  43208085 gacttatttgaacttatctactgacatacacactactgagactgtttgaaagagcttataaaaacagct 43208153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 28803451 - 28803557
Alignment:
Q  19 tttggatcgacttattagaacttatctactcacataagcacatgtgagattgtttggaagatcttataaaaacagctcattacatttccataagctctcc 118  Q
    ||||||| |||||||| || |||||||||   ||||||||||||||||| ||||||  ||| | |||  ||||| || || |||| ||||||||||||||    
T  28803451 tttggattgacttatttgagcttatctaccggcataagcacatgtgagactgtttgagagaacatatggaaacaacttatgacatgtccataagctctcc 28803550  T
Q  119 aggatag 125  Q
    |||||||    
T  28803551 aggatag 28803557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 11393557 - 11393494
Alignment:
Q  174 cttgtatggataaatagcttagttaagcacttatagcataagcgtttatcgtataagtgtttat 237  Q
    ||||| |||||||| |||||| |||||||||||||||| ||| ||||||| |||||||| ||||    
T  11393557 cttgtttggataaacagcttaattaagcacttatagcacaagtgtttatcatataagtgcttat 11393494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 11410218 - 11410155
Alignment:
Q  174 cttgtatggataaatagcttagttaagcacttatagcataagcgtttatcgtataagtgtttat 237  Q
    ||||| |||||||| |||||| |||||||||||||||| ||| ||||||| |||||||| ||||    
T  11410218 cttgtttggataaacagcttaattaagcacttatagcacaagtgtttatcatataagtgcttat 11410155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 35809852 - 35809921
Alignment:
Q  214 agcgtttatcgtataagtgtttatgttttaagttatttctatgacaaagataaaataaagtcaaactgttt 284  Q
    |||| ||||| |||||||| |||||| | |||||||||| ||||||||||||||||||| ||||| |||||    
T  35809852 agcgcttatcatataagtgcttatgtat-aagttatttccatgacaaagataaaataaaatcaaattgttt 35809921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 284
Target Start/End: Complemental strand, 42817538 - 42817457
Alignment:
Q  203 cttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatgac-aaagataaaataaagtcaaactgttt 284  Q
    ||||||||||||||||||||| |||||||||| || || || |||||||||||  | ||||||||||| ||||||| ||||||    
T  42817538 cttatagcataagcgtttatcatataagtgttgat-ttatatgttatttctataccaaaagataaaatgaagtcaagctgttt 42817457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 18885018 - 18884921
Alignment:
Q  17 tgtttggatcgacttattagaacttatctactcacataagcacatgtgagattgtttggaagatcttataaaaacagctcattacatttccataagct 114  Q
    |||||||||||||||||| || | |||||| | ||||||| || ||| ||  ||||||| ||| |||||| |||||||| || |||||||||| ||||    
T  18885018 tgtttggatcgacttattcgagcgtatctattgacataagaacttgtaaggctgtttgggagagcttatagaaacagcttatgacatttccattagct 18884921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 278
Target Start/End: Original strand, 31461325 - 31461421
Alignment:
Q  182 gataaatagcttagttaagcacttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatgacaaa-gataaaataaagtcaaa 278  Q
    |||||| | |||| |||||||||| |||||||| ||| |||| |||||||| |||| | | ||| ||||||||| ||||| |||||||||||||||||    
T  31461325 gataaacaacttaattaagcacttctagcataaacgtatatcatataagtggttatatat-aagctatttctataacaaaagataaaataaagtcaaa 31461421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 284
Target Start/End: Original strand, 35459799 - 35459899
Alignment:
Q  184 taaatagcttagttaagcacttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatgac-aaagataaaataaagtcaaactgt 282  Q
    ||||||||||| || ||| ||||||||||||| ||||||| |||||||| || || | |||| ||||| |||  | |||||||||||||||||||| |||    
T  35459799 taaatagcttaattcagctcttatagcataagtgtttatcatataagtgattttg-tataagctatttgtataccaaaagataaaataaagtcaaattgt 35459897  T
Q  283 tt 284  Q
    ||    
T  35459898 tt 35459899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 111
Target Start/End: Original strand, 43456627 - 43456720
Alignment:
Q  18 gtttggatcgacttattagaacttatctactcacataagcacatgtgagattgtttggaagatcttataaaaacagctcattacatttccataa 111  Q
    ||||||||  ||||||| |||||||| ||||||||||| ||| ||| ||| |||||| |||| ||| | |||||| ||||| |||| |||||||    
T  43456627 gtttggatttacttatttgaacttatttactcacataaacacttgtaagactgtttgaaagagcttgtgaaaacaactcatgacatgtccataa 43456720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 17221714 - 17221666
Alignment:
Q  191 cttagttaagcacttatagcataagcgtttatcgtataagtgtttatgt 239  Q
    |||| ||||||||||||||||||||| |||||| | |||||||||||||    
T  17221714 cttaattaagcacttatagcataagcctttatcatttaagtgtttatgt 17221666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 284
Target Start/End: Original strand, 29430661 - 29430744
Alignment:
Q  200 gcacttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatgacaaagataaaataaagtcaaactgttt 284  Q
    |||||| ||| ||||||||||||| || ||| |||||||| | ||| ||||||||| |||||  | |||||||||||||||||||    
T  29430661 gcacttgtagtataagcgtttatcatacaagggtttatgtat-aagctatttctataacaaaagttaaataaagtcaaactgttt 29430744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 284
Target Start/End: Original strand, 18884766 - 18884871
Alignment:
Q  180 tggataaatagcttagttaagcacttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctat--gacaaagataaaataaagtcaa 277  Q
    |||||||| |||||| | ||||||||||||||| ||  |||||| |||||||| | ||| | ||||||||||||||   | ||| |||||||||| ||||    
T  18884766 tggataaacagcttaatcaagcacttatagcattagtttttatcatataagtgctcatg-tataagttatttctataaaaaaaatataaaataaaatcaa 18884864  T
Q  278 actgttt 284  Q
    |||||||    
T  18884865 actgttt 18884871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 7103392 - 7103450
Alignment:
Q  17 tgtttggatcgacttattagaacttatctactcacataagcacatgtgagattgtttgg 75  Q
    ||||||||| |||||||| ||  ||||||| | |||| |||||||||||||||||||||    
T  7103392 tgtttggattgacttatttgagtttatctattgacatgagcacatgtgagattgtttgg 7103450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 10143096 - 10143161
Alignment:
Q  219 ttatcgtataagtgtttatgttttaagttatttctatgacaaa-gataaaataaagtcaaactgttt 284  Q
    |||||| ||||||| |||||| | ||||||||||||| ||||| |||||||| ||||||||||||||    
T  10143096 ttatcgaataagtgcttatgtat-aagttatttctataacaaaagataaaattaagtcaaactgttt 10143161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 284
Target Start/End: Original strand, 15171130 - 15171239
Alignment:
Q  175 ttgtatggataaatagcttagttaagcacttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatgaca-aagataaaataaag 273  Q
    |||| |||||||||| |||| |||||   |||||||||||||   |||  |||||||||||||| | |||||| ||||||| ||| |||||||| |||||    
T  15171130 ttgtttggataaataacttaattaagtgtttatagcataagctcgtattttataagtgtttatg-tataagttttttctataacagaagataaattaaag 15171228  T
Q  274 tcaaactgttt 284  Q
    ||||| |||||    
T  15171229 tcaaaatgttt 15171239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 284
Target Start/End: Complemental strand, 33576768 - 33576675
Alignment:
Q  191 cttagttaagcacttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatgacaaa-gataaaataaagtcaaactgttt 284  Q
    ||||||||| ||||||||  |||||||| ||||  |||| || |||||| | | ||||||||||| ||||| |||| ||||||||||||||||||    
T  33576768 cttagttaaacacttataagataagcgtctatcacataaatgcttatgtat-aggttatttctataacaaaagatacaataaagtcaaactgttt 33576675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 37474656 - 37474698
Alignment:
Q  180 tggataaatagcttagttaagcacttatagcataagcgtttat 222  Q
    ||||||||||||||| ||||||||||||||| |||| ||||||    
T  37474656 tggataaatagcttaattaagcacttatagcttaagtgtttat 37474698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 42852633 - 42852699
Alignment:
Q  29 cttattagaacttatctactcacataagcacatgtgagattgtttggaagatcttataaaaacagct 95  Q
    |||||| |||||||||| ||  ||||||||| ||||||| ||||||||||| | ||| |||||||||    
T  42852633 cttatttgaacttatctgctggcataagcacttgtgagactgtttggaagagcctatgaaaacagct 42852699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 43199986 - 43199928
Alignment:
Q  17 tgtttggatcgacttattagaacttatctactcacataagcacatgtgagattgtttgg 75  Q
    |||||||||  | ||||| ||||||||||||||| |||||||| ||||||| |||||||    
T  43199986 tgtttggattcatttatttgaacttatctactcatataagcacttgtgagactgtttgg 43199928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 15200512 - 15200440
Alignment:
Q  182 gataaatagcttagttaagcacttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctat 255  Q
    |||||| | |||| ||||||| ||||||||||| | ||||||||||||||| |||| | ||||| |||||||||    
T  15200512 gataaaaaacttaattaagcatttatagcataaccatttatcgtataagtgcttat-tcttaagctatttctat 15200440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 31558873 - 31558833
Alignment:
Q  18 gtttggatcgacttattagaacttatctactcacataagca 58  Q
    ||||| ||||||||||| |||||||||||||| ||||||||    
T  31558873 gtttgaatcgacttatttgaacttatctactcccataagca 31558833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 278
Target Start/End: Complemental strand, 38239725 - 38239638
Alignment:
Q  191 cttagttaagcacttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatgac-aaagataaaataaagtcaaa 278  Q
    |||| |||||||||| ||||||||||  | ||| | |||||||||||| | |||| ||||||||| || ||||||||||| ||||||||    
T  38239725 cttaattaagcacttgtagcataagcactcatcatgtaagtgtttatg-tataagctatttctataacaaaagataaaatcaagtcaaa 38239638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000006; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 180 - 283
Target Start/End: Original strand, 23895221 - 23895324
Alignment:
Q  180 tggataaatagcttagttaagcacttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatgac-aaagataaaataaagtcaaa 278  Q
    ||||| |||| |||| ||||||||||| |||||||||  ||||| |||||||  ||||| | |||| ||||||||| || |||||||||||||| |||||    
T  23895221 tggatgaataacttaattaagcacttaaagcataagcccttatcatataagttattatg-tataagctatttctataacaaaagataaaataaattcaaa 23895319  T
Q  279 ctgtt 283  Q
    |||||    
T  23895320 ctgtt 23895324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 23373232 - 23373307
Alignment:
Q  17 tgtttggatcgacttattagaacttatctactcacataagcacatgtgagattgtttggaagatcttataaaaaca 92  Q
    |||||| || |||||||| |||||| |||||| | |||||||| ||||||||||||||| ||| |||||| |||||    
T  23373232 tgtttgaattgacttatttgaacttgtctactgatataagcacttgtgagattgtttgggagagcttatagaaaca 23373307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 6292643 - 6292585
Alignment:
Q  17 tgtttggatcgacttattagaacttatctactcacataagcacatgtgagattgtttgg 75  Q
    ||||||||| |||||||| || |||||||||| |||||||||| | |||||||||||||    
T  6292643 tgtttggattgacttatttgagcttatctactgacataagcacttttgagattgtttgg 6292585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 15360827 - 15360883
Alignment:
Q  228 aagtgtttatgttttaagttatttctatgacaaa-gataaaataaagtcaaactgttt 284  Q
    |||||||||||| ||| ||||||||||| ||||| |||||||||||||||||||||||    
T  15360827 aagtgtttatgtatta-gttatttctataacaaaagataaaataaagtcaaactgttt 15360883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 24460320 - 24460377
Alignment:
Q  17 tgtttggatcgacttattagaacttatctactcacataagcacatgtgagattgtttg 74  Q
    ||||||||| |||||||| ||||||||||||| |||| ||||| ||||||| ||||||    
T  24460320 tgtttggattgacttatttgaacttatctactgacatgagcacttgtgagactgtttg 24460377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 26179513 - 26179464
Alignment:
Q  103 tttccataagctctccaggatagcttatatcaaaacaatttgactatttt 152  Q
    ||||||||| ||||||| ||||||||||||||||||||||| ||| ||||    
T  26179513 tttccataaactctccaagatagcttatatcaaaacaattttactttttt 26179464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 284
Target Start/End: Original strand, 4338555 - 4338638
Alignment:
Q  202 acttatagcataagcgtttatcgtataagtg-tttatgttttaagttatttctatgaca-aagataaaataaagtcaaactgttt 284  Q
    |||||||| ||||| ||||||| |||||||| ||||||| | ||||||| ||||  ||| |||||||||||||||||||||||||    
T  4338555 acttatagtataagtgtttatcatataagtgctttatgtat-aagttatgtctagaacagaagataaaataaagtcaaactgttt 4338638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 15581383 - 15581343
Alignment:
Q  39 cttatctactcacataagcacatgtgagattgtttggaaga 79  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  15581383 cttatctactgacataagcacttgtgagattgtttggaaga 15581343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 29794107 - 29794048
Alignment:
Q  180 tggataaatagcttagttaagcacttatagcataagcgtttatcgtataagtgtttatgt 239  Q
    |||||||| |||||| |||||| ||||||||||||| |||| || |||| ||||||||||    
T  29794107 tggataaacagcttaattaagcgcttatagcataagtgtttttcatatatgtgtttatgt 29794048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 46499902 - 46499972
Alignment:
Q  102 atttccataagctctccaggatagcttatatcaaaacaatttgac--tattttatcttatattatagaaat 170  Q
    |||| ||||||||||||| || |||||| || |||||||||||||  ||||||||||| | ||||||||||    
T  46499902 attttcataagctctccatgaaagcttaaataaaaacaatttgactttattttatcttttcttatagaaat 46499972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 49365973 - 49365914
Alignment:
Q  180 tggataaatagcttagttaagcacttatagcataagcgtttatcgtataagtgtttatgt 239  Q
    |||||||| | ||||||||||| |||||||||||| |||||||  |||||||| ||||||    
T  49365973 tggataaacaacttagttaagcgcttatagcataaacgtttataatataagtgcttatgt 49365914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 33723301 - 33723387
Alignment:
Q  17 tgtttggatcgacttattagaacttatctactcacataagcacatgtgagattgtttggaagatcttataaaaacagctcattacat 103  Q
    ||||||||| |||||||| |||||||||||||  ||||| ||| ||||||| || |||| | | |||||  ||||||||||| ||||    
T  33723301 tgtttggattgacttatttgaacttatctactaccataaacacttgtgagactgcttgggaaaacttatggaaacagctcatgacat 33723387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 5157221 - 5157148
Alignment:
Q  19 tttggatcgacttattagaacttatctactcacataagcacatgtgagattgtttggaagatcttataaaaaca 92  Q
    ||||||| |||||||| ||||||||||||  |||||| ||| ||||| | ||||||| ||| |||||| |||||    
T  5157221 tttggattgacttatttgaacttatctacggacataaacacttgtgaaactgtttgggagagcttatagaaaca 5157148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 24502953 - 24502916
Alignment:
Q  247 tatttctatgacaaagataaaataaagtcaaactgttt 284  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  24502953 tatttctataacaaagataaaatatagtcaaactgttt 24502916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 222
Target Start/End: Complemental strand, 29665943 - 29665890
Alignment:
Q  169 atgggcttgtatggataaatagcttagttaagcacttatagcataagcgtttat 222  Q
    |||| ||||| |||||||| |||||| |||| ||||||||||||||||| ||||    
T  29665943 atggccttgtttggataaacagcttaattaaacacttatagcataagcgcttat 29665890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 5090757 - 5090797
Alignment:
Q  180 tggataaatagcttagttaagcacttatagcataagcgttt 220  Q
    ||||||||||||||| ||||||||||| |||||||| ||||    
T  5090757 tggataaatagcttaattaagcacttaaagcataagagttt 5090797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 284
Target Start/End: Original strand, 49516984 - 49517059
Alignment:
Q  210 cataagcgtttatcgtataagt-gtttatgttttaagttatttctatgacaaa-gataaaataaagtcaaactgttt 284  Q
    |||||||||||||| ||||| | |||| ||| | ||||||||||||| ||||| ||||||||||||||||| |||||    
T  49516984 cataagcgtttatcatataaattgtttgtgtat-aagttatttctataacaaaagataaaataaagtcaaattgttt 49517059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000003; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 281
Target Start/End: Original strand, 6739780 - 6739858
Alignment:
Q  203 cttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctat-gacaaagataaaataaagtcaaactg 281  Q
    |||||| |||||||||||||| |||||| ||||||| | ||||| ||||||||  | |||||||||||||||||||||||    
T  6739780 cttatatcataagcgtttatcatataagcgtttatg-tataagtcatttctataaataaagataaaataaagtcaaactg 6739858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 130
Target Start/End: Original strand, 38047796 - 38047911
Alignment:
Q  15 catgtttggatcgacttattagaacttatctactcacataagcacatgtgagattgtttggaagatcttataaaaacagctcattacatttccataagct 114  Q
    ||||||| ||| | |||| | |||||||||||||   ||||| || |||| || ||||||| ||| |||||  ||||| || || |||| ||||||||||    
T  38047796 catgtttagattggcttacttgaacttatctactattataagtacttgtgtgactgtttgggagagcttatggaaacaacttatgacatgtccataagct 38047895  T
Q  115 ctccaggatagcttat 130  Q
    ||||||||||||||||    
T  38047896 ctccaggatagcttat 38047911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 14331517 - 14331421
Alignment:
Q  17 tgtttggatcgacttattagaacttatctactcacataagcacatgtgagattgtttggaagatcttataaaaacagctcattacatttccataagct 114  Q
    ||||||||| |||||||| || ||||||||||  |||||||||   ||||||||||||||| | ||||  ||||||||| || |||| ||||||||||    
T  14331517 tgtttggattgacttatttgagcttatctactgtcataagcactcttgagattgtttggaaaaactta-caaaacagcttatgacatgtccataagct 14331421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 272
Target Start/End: Original strand, 26516183 - 26516275
Alignment:
Q  180 tggataaatagcttagttaagcacttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatgac-aaagataaaataaa 272  Q
    |||||||| | |||| |||||| ||||||||||||||| ||||| |||||||| ||||| | |||| ||||||||  || ||||||||||||||    
T  26516183 tggataaacaacttaattaagcgcttatagcataagcgcttatcatataagtgcttatg-tataagctatttctaaaacaaaagataaaataaa 26516275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 16380639 - 16380686
Alignment:
Q  122 atagcttatatcaaaacaatttgactattttatcttatattatagaaat 170  Q
    ||||||||||||||| |||||||||||||||||||| | ||||||||||    
T  16380639 atagcttatatcaaaccaatttgactattttatctt-tgttatagaaat 16380686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 280
Target Start/End: Complemental strand, 35135826 - 35135747
Alignment:
Q  201 cacttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatgacaaa-gataaaataaagtcaaact 280  Q
    |||| |||||||||| | ||| | ||||||||||||||| | ||| ||||||||| ||||| |||||||||||||||||||    
T  35135826 cactcatagcataagtgcttaacatataagtgtttatgtat-aagatatttctataacaaaagataaaataaagtcaaact 35135747  T

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Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 203 - 277
Target Start/End: Complemental strand, 20982297 - 20982223
Alignment:
Q  203 cttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatgacaaa-gataaaataaagtcaa 277  Q
    ||||||||||||| | ||||| |||||||| ||||| | |||| ||||||||| ||||| ||||||||||||||||    
T  20982297 cttatagcataagtgcttatcatataagtgcttatg-tataagctatttctataacaaaggataaaataaagtcaa 20982223  T

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Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 284
Target Start/End: Original strand, 33234308 - 33234350
Alignment:
Q  242 taagttatttctatgacaaagataaaataaagtcaaactgttt 284  Q
    ||||||||||||| |||||| ||||||| ||||||||||||||    
T  33234308 taagttatttctacgacaaatataaaatgaagtcaaactgttt 33234350  T

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Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 36774735 - 36774778
Alignment:
Q  102 atttccataagctctccaggatagcttatatcaaaacaatttgact 147  Q
    ||||||||||||||||||||||||||||||  |||||| |||||||    
T  36774735 atttccataagctctccaggatagcttata--aaaacagtttgact 36774778  T

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Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 17369354 - 17369306
Alignment:
Q  17 tgtttggatcgacttattagaacttatctactcacataagcacatgtga 65  Q
    ||||||||| |||||||| ||||||||||||| |||||| ||| |||||    
T  17369354 tgtttggattgacttatttgaacttatctactgacataatcacttgtga 17369306  T

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Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 284
Target Start/End: Complemental strand, 29117051 - 29117011
Alignment:
Q  245 gttatttctatgacaaa-gataaaataaagtcaaactgttt 284  Q
    ||||||||||| ||||| |||||||||||||||||||||||    
T  29117051 gttatttctataacaaaagataaaataaagtcaaactgttt 29117011  T

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Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 130
Target Start/End: Complemental strand, 30217124 - 30217096
Alignment:
Q  102 atttccataagctctccaggatagcttat 130  Q
    |||||||||||||||||||||||||||||    
T  30217124 atttccataagctctccaggatagcttat 30217096  T

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Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 38033956 - 38034024
Alignment:
Q  27 gacttattagaacttatctactcacataagcacatgtgagattgtttggaagatcttataaaaacagct 95  Q
    |||||||| || ||| ||||||  ||||||||| ||||||| |||||||||||  |||| |||||||||    
T  38033956 gacttatttgagcttttctactggcataagcacctgtgagactgtttggaagaagttattaaaacagct 38034024  T

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Target: scaffold0024 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 284
Target Start/End: Original strand, 27484 - 27565
Alignment:
Q  203 cttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatgaca-aagataaaataaagtcaaactgttt 284  Q
    ||||||||||||||  ||||| | |||||| |||||| | ||||||||||||| ||| ||||||||||||||||||| |||||    
T  27484 cttatagcataagctcttatcatgtaagtgcttatgtat-aagttatttctataacagaagataaaataaagtcaaattgttt 27565  T

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Target: chr7 (Bit Score: 34; Significance: 0.0000000004; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 116
Target Start/End: Complemental strand, 23215008 - 23214907
Alignment:
Q  15 catgtttggatcgacttattagaacttatctactcacataagcacatgtgagattgtttggaagatcttataaaaacagctcattacatttccataagct 114  Q
    ||||||||||| |||||||| || ||||||||||  ||||| ||| | ||||| ||||||  |||  |||| |||||| || || |||||||||||||||    
T  23215008 catgtttggattgacttatttgaccttatctactagcataaacacttatgagactgtttgagagaatttatgaaaacaacttatgacatttccataagct 23214909  T
Q  115 ct 116  Q
    ||    
T  23214908 ct 23214907  T

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Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 30751671 - 30751594
Alignment:
Q  16 atgtttggatcgacttattagaacttatctactcacataagcacatgtgagattgtttggaagatcttataaaaacag 93  Q
    ||||||||||  |||||||  |||||||||||| |||||||||| |||| || ||||||| ||| |||||| ||||||    
T  30751671 atgtttggattaacttatttaaacttatctactgacataagcacttgtgcgactgtttgggagagcttatagaaacag 30751594  T

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Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 29363659 - 29363603
Alignment:
Q  17 tgtttggatcgacttattagaacttatctactcacataagcacatgtgagattgttt 73  Q
    ||||||||| | |||||| ||||||||||||| |||||||||| ||||||| |||||    
T  29363659 tgtttggattggcttatttgaacttatctactaacataagcacttgtgagactgttt 29363603  T

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Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 278
Target Start/End: Original strand, 49060429 - 49060523
Alignment:
Q  184 taaatagcttagttaagcacttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatgac-aaagataaaataaagtcaaa 278  Q
    |||| |||||| |||||||||||||| ||||  | ||||| ||||||| |||||| | |||| ||||||||| || ||| ||||||||||||||||    
T  49060429 taaacagcttaattaagcacttatagtataatggcttatcatataagtatttatg-tataagctatttctataacaaaaaataaaataaagtcaaa 49060523  T

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Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 284
Target Start/End: Complemental strand, 27481456 - 27481375
Alignment:
Q  203 cttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatgacaaa-gataaaataaagtcaaactgttt 284  Q
    ||||||||||||  ||||||  |||||||||||||| | |||| ||||||||| ||||| |||||||  ||||||||||||||    
T  27481456 cttatagcataaatgtttattatataagtgtttatg-tataagctatttctataacaaaggataaaacgaagtcaaactgttt 27481375  T

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Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 280
Target Start/End: Original strand, 47003995 - 47004072
Alignment:
Q  203 cttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatgacaa-agataaaataaagtcaaact 280  Q
    ||||||||| ||  ||||||| ||||||||||||| | | ||| ||||||||| |||| ||||||||||||||||||||    
T  47003995 cttatagcaaaaatgtttatcatataagtgtttatatgt-aagctatttctataacaatagataaaataaagtcaaact 47004072  T

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Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 1431470 - 1431395
Alignment:
Q  203 cttatagcataagcgtttatcgtataagtgtttatgttttaagttatttctatga-caaagataaaataaagtcaaa 278  Q
    ||||||||||||| | ||||| |||||||||||||| | ||||||||||| || |  ||| ||||||||||||||||    
T  1431470 cttatagcataagtgcttatcatataagtgtttatg-tataagttatttccataatgaaaaataaaataaagtcaaa 1431395  T

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Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 31002822 - 31002878
Alignment:
Q  39 cttatctactcacataagcacatgtgagattgtttggaagatcttataaaaacagct 95  Q
    ||||||||||  ||||||||  ||||||| |||||||| || |||||||||||||||    
T  31002822 cttatctactgtcataagcaattgtgagactgtttggatgagcttataaaaacagct 31002878  T

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