View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10254_high_2 (Length: 489)
Name: NF10254_high_2
Description: NF10254
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10254_high_2 |
 | |
|
| [»] scaffold1439 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 473; Significance: 0; HSPs: 34)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 473; E-Value: 0
Query Start/End: Original strand, 7 - 483
Target Start/End: Complemental strand, 22358133 - 22357657
Alignment:
| Q |
7 |
attttttgcatgatattgaatttgctatgattgataacaaaaagggttctaggatattaatcactacaagaaacatggatgttgcgaatacttgtaagaa |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22358133 |
attttttgcatgatattgaatttgctatgattgataacaaaaagggttctaggatattaatcactacaagaaacatggatgttgcgaatacttgtaagaa |
22358034 |
T |
|
| Q |
107 |
atcttcttttgttgaagtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgttcaataagaaggcattccatgacttaaatggacgttgt |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22358033 |
atcttcttttgttgaagtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgttcaataagaaggcattccatgacttaaatggacgttgt |
22357934 |
T |
|
| Q |
207 |
ccagaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattaccactagcaattgtagtcattggtggtattttagctcccaaagata |
306 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22357933 |
ccagaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattaccactagcaattgtagtcattggtggtattttagctcccaaagata |
22357834 |
T |
|
| Q |
307 |
aaattccaatggaatggtataagtttagtgaaaatataaatgcagagttagaggaatattccataataagaaaatttttaggatttagttaccatgattt |
406 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
22357833 |
aaattccaatggaatggtataagtttagtgaaaatataaatgcagagttagaggaatattccataataagaaaaattttaggatttagttaccatgattt |
22357734 |
T |
|
| Q |
407 |
gccttactacctcaagtcatgtttcttgtattttggattatatcctgaagactataaagttcattcaaagacattga |
483 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22357733 |
gccttactacctcaagtcatgtttcttgtattttggattatatcctgaagactataaagttcattcaaagacattga |
22357657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 7 - 483
Target Start/End: Complemental strand, 22442870 - 22442397
Alignment:
| Q |
7 |
attttttgcatgatattgaatttgctatgattgataacaaaaagggttctaggatattaatcactacaagaaacatggatgttgcgaatacttgtaagaa |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
22442870 |
attttttgcatgatattgaatttgctatgattgataacaaaaagggttctaggatattaatcactacaagaaacatggatgttgcaaatacttgtaagaa |
22442771 |
T |
|
| Q |
107 |
atcttcttttgttgaagtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgttcaataagaaggcattccatgacttaaatggacgttgt |
206 |
Q |
| |
|
||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
22442770 |
atcttcttttgtt------tacgaactaaaaggtttgactgtagaacaatctttggagttgttcaataagaaggcatttcatgacttaaacggacgttgt |
22442677 |
T |
|
| Q |
207 |
ccagaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattaccactagcaattgtagtcattggtggtattttagctcccaaagata |
306 |
Q |
| |
|
||| |||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22442676 |
ccaaaaaatcttattggtatatcttccaaaattgttgaaaaatgcaatggattaccactagcaattgtagtcattggtggtattttagctcccaaagata |
22442577 |
T |
|
| Q |
307 |
aaattccaatggaatggtataagtttagtgaaaatataaatgcag---agttagaggaatattccataataagaaaatttttaggatttagttaccatga |
403 |
Q |
| |
|
|| | |||| ||||||||| |||||| ||||||||||||||||| |||| |||||||||||||| |||||||| |||||||| | ||||||||||| |
|
|
| T |
22442576 |
gaaatacaattgaatggtatgagtttaatgaaaatataaatgcagatcagtttaaggaatattccatagtaagaaaaattttaggactcagttaccatga |
22442477 |
T |
|
| Q |
404 |
tttgccttactacctcaagtcatgtttcttgtattttggattatatcctgaagactataaagttcattcaaagacattga |
483 |
Q |
| |
|
|||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||| ||| | |||||||||||||| |
|
|
| T |
22442476 |
tttgccttgcaacctcaagtcatgtttcttgtattttggattatatcccgaagactatgaagcttgttcaaagacattga |
22442397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 16 - 483
Target Start/End: Complemental strand, 22436756 - 22436286
Alignment:
| Q |
16 |
atgatattgaatttgctatgattgataacaaaaagggttctaggatattaatcactacaagaaacatggatgttgcgaatacttgtaagaaatcttcttt |
115 |
Q |
| |
|
||||||||||||||||||||||||||||| ||| ||||||| | |||||||||| ||||| || ||| ||||||| ||| ||| ||||| ||||||||| |
|
|
| T |
22436756 |
atgatattgaatttgctatgattgataacttaaatggttctaaggtattaatcacaacaaggaaaatgaatgttgcaaattcttttaagagatcttcttt |
22436657 |
T |
|
| Q |
116 |
tgttgaagtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgttcaataagaaggcattccatgacttaaatggacgttgtccagaaaat |
215 |
Q |
| |
|
||||||||| ||||||| ||||||| |||| |||| ||||||| || |||||||||||||||||||||||| |||| | |||| |||||||| ||||| |
|
|
| T |
22436656 |
tgttgaagtacatgaacttcaaggtttaactgaagaaaaatctttagaattgttcaataagaaggcattccataacttgagtggatgttgtccacaaaat |
22436557 |
T |
|
| Q |
216 |
cttattgatatatcttccaaaattgttaaaaaatgcaaaggattaccactagcaattgtagtcattggtggtattttagctcccaaagataaaattccaa |
315 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||| || |||||||| || ||| | |
|
|
| T |
22436556 |
cttattgatatatcttccaaaattgttaaaaaatgcaaaggattacctctagcaattgtagtcactggtggtcttttatcttgcaaagatagaaatccta |
22436457 |
T |
|
| Q |
316 |
tggaatggtataagtttagtgaaaatataaatgcaga---gttagaggaatattccataataagaaaatttttaggatttagttaccatgatttgcctta |
412 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| || | | ||||||||||||||||||||| || |||||||||||||||||||||||||||| |
|
|
| T |
22436456 |
ctgaatggtacaagtttagtgaaaatataaatgcagatcagtcaaatgaatattccataataagaaaaattctaggatttagttaccatgatttgcctta |
22436357 |
T |
|
| Q |
413 |
ctacctcaagtcatgtttcttgtattttggattatatcctgaagactataaagttcattcaaagacattga |
483 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||| |
|
|
| T |
22436356 |
ctacctcaagtcgtgtttcttgtattttggattatatcctgaagactatatagttcgttcaaaaacattga |
22436286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 7 - 459
Target Start/End: Complemental strand, 22368058 - 22367603
Alignment:
| Q |
7 |
attttttgcatgatattgaatttgctatgattgataacaaaaagggttctaggatattaatcactacaagaaacatggatgttgcgaatacttgtaagaa |
106 |
Q |
| |
|
|||||| | |||||||||||||| ||||||||||||||||||| |||| || |||||||||||| ||||||||| ||||||||| || |||||||||| |
|
|
| T |
22368058 |
atttttggaatgatattgaattttctatgattgataacaaaaatggttgtaagatattaatcacaacaagaaacgaggatgttgcagatgcttgtaagaa |
22367959 |
T |
|
| Q |
107 |
atcttcttttgttgaagtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgttcaataagaaggcattccatgacttaaatggacgttgt |
206 |
Q |
| |
|
||||||||||||||||||| || |||| ||||||| | || |||| ||||||| || ||||||||||||||||| ||||||||||| | ||| |||| |
|
|
| T |
22367958 |
atcttcttttgttgaagtgcataaacttgaaggtttaagtgaagaaaaatctttagaattgttcaataagaaggcgttccatgacttgagcggatattgt |
22367859 |
T |
|
| Q |
207 |
ccagaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattaccactagcaattgtagtcattggtggtattttagctcccaaagata |
306 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
22367858 |
ccagaaaatcttattgatatatcttccaaaattgttgaaaaatgcaatggattaccactcgcaattgtagtcattggtggtattttagcttgcaaagata |
22367759 |
T |
|
| Q |
307 |
aaattccaatggaatggtataagtttagtgaaaatataaatgcag---agttagaggaatattccataataagaaaatttttaggatttagttaccatga |
403 |
Q |
| |
|
| |||||| ||||||| |||||||||||||||||||||||||| ||| | ||||||||||||| |||| |||| || ||||| ||||||||||||| |
|
|
| T |
22367758 |
ggaatccaattgaatggtctaagtttagtgaaaatataaatgcagatcagtcaaaggaatattccatgataaaaaaaattctaggacttagttaccatga |
22367659 |
T |
|
| Q |
404 |
tttgccttactacctcaagtcatgtttcttgtattttggattatatcctgaagact |
459 |
Q |
| |
|
|||||||| | |||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
22367658 |
tttgccttgcaacctcaagtcatgtttcttgtactttggattatatcctgaagact |
22367603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 6 - 481
Target Start/End: Complemental strand, 22431305 - 22430827
Alignment:
| Q |
6 |
aattttttgcatgatattgaatttgctatgattgataacaaaaagggttctaggatattaatcactacaagaaacatggatgttgcgaatacttgtaaga |
105 |
Q |
| |
|
||||||| | |||||||||||||||||||||||||||||||||| |||| || |||||||||||| |||||||||| ||||| || || ||||||||| |
|
|
| T |
22431305 |
aatttttggtatgatattgaatttgctatgattgataacaaaaatggttgtaagatattaatcacaacaagaaacaaggatggtgtagatgcttgtaaga |
22431206 |
T |
|
| Q |
106 |
aatcttcttttgttgaagtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgttcaataagaaggcattccatgacttaaatggacgttg |
205 |
Q |
| |
|
|||||||||||||||||||| ||||||| |||||||| || | |||| ||||||| || |||||||||||||| | ||||||||||| | ||| ||| |
|
|
| T |
22431205 |
aatcttcttttgttgaagtgcatgaacttaaaggtttaaccgaagaaaaatctttagaattgttcaataagaaagtgttccatgacttgagcggatattg |
22431106 |
T |
|
| Q |
206 |
tccagaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattaccactagcaattgtagtcattggtggtattttagctcccaaagat |
305 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
22431105 |
tccagaaaatcttatagatatatcttccaaaattgttgaaaaatgcaatggattaccactcgcaattgtagtcattggtggtattttagcttgcaaagat |
22431006 |
T |
|
| Q |
306 |
aaaattccaatggaatggtataagtttagtgaaaatataaatgcag---agttagaggaatattccataataagaaaatttttaggatttagttaccatg |
402 |
Q |
| |
|
| | |||||| ||||||| |||||||||||||||||||||||||| || | | ||| || | | ||||||||| ||||||| |||||||||||| |
|
|
| T |
22431005 |
aggaatccaattgaatggtctaagtttagtgaaaatataaatgcagatcaggcaaatgaaaatcctgtgataagaaaaactttaggacttagttaccatg |
22430906 |
T |
|
| Q |
403 |
atttgccttactacctcaagtcatgtttcttgtattttggattatatcctgaagactataaagttcattcaaagacatt |
481 |
Q |
| |
|
||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||| |
|
|
| T |
22430905 |
atttgccttgcaacctcaagtcatgtttcttgtattttggattatatcctaaagactatatagtttattcaaagacatt |
22430827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 16 - 476
Target Start/End: Complemental strand, 22630560 - 22630103
Alignment:
| Q |
16 |
atgatattgaatttgctatgattgataacaaaaagggttctaggatattaatcactacaagaaacatggatgttgcgaatacttgtaagaaatcttcttt |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||| || |||||||||||| |||||||||| ||||||||| || ||||||||||||||| | |
|
|
| T |
22630560 |
atgatattgaatttgctatgattgataacaaaaatggttgtaagatattaatcacaacaagaaacaaggatgttgcagatgcttgtaagaaatctt---t |
22630464 |
T |
|
| Q |
116 |
tgttgaagtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgttcaataagaaggcattccatgacttaaatggacgttgtccagaaaat |
215 |
Q |
| |
|
|| ||||| |||| || || |||| ||| |||||| ||||| || ||||| || ||||| || ||||||||||| ||||| ||||||||||||| |
|
|
| T |
22630463 |
tggcaaagtgcatgagctggaacgtttatctgaagaacagtctttggaattgtttaaaaagaaagcgttccatgacttggatggattttgtccagaaaat |
22630364 |
T |
|
| Q |
216 |
cttattgatatatcttccaaaattgttaaaaaatgcaaaggattaccactagcaattgtagtcattggtggtattttagctcccaaagataaaattccaa |
315 |
Q |
| |
|
||| |||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||| ||||||| ||| ||||| || || ||||| |
|
|
| T |
22630363 |
ctttttgacatatcttccaaaattgttgaaaaatgcaaaggattacctctagcaattgtagtcaccggtgatattttatctcgcaaagttagaaatccaa |
22630264 |
T |
|
| Q |
316 |
tggaatggtataagtttagtgaaaatataaatgcagagttagaggaatattccataataagaaaatttttaggatttagttaccatgatttgccttacta |
415 |
Q |
| |
|
| ||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||| | |
|
|
| T |
22630263 |
ttgaatggtctaagtttagtgaaaatataaatgtagagttagaggaatattccacaataagaaaaaatttaggatttagttaccatgatttaccttacaa |
22630164 |
T |
|
| Q |
416 |
cctcaagtcatgtttcttgtattttggattatatcctgaagactataaagttcattcaaag |
476 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||| |
|
|
| T |
22630163 |
cctcaagtcatgtttcttgtattttggattctatcctgaagactatatagttcgttcaaag |
22630103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 7 - 483
Target Start/End: Complemental strand, 22468079 - 22467606
Alignment:
| Q |
7 |
attttttgcatgatattgaatttgctatgattgataacaaaaagggttctaggatattaatcactacaagaaacatggatgttgcgaatacttgtaagaa |
106 |
Q |
| |
|
|||||| | |||||||||||||||||||||||||||||||||| |||| || |||||||||||| || ||||||| || |||||| || |||||||||| |
|
|
| T |
22468079 |
atttttggtatgatattgaatttgctatgattgataacaaaaatggttgtaagatattaatcacaacgagaaacaaggttgttgcagatgcttgtaagaa |
22467980 |
T |
|
| Q |
107 |
atcttcttttgttgaagtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgttcaataagaaggcattccatgacttaaatggacgttgt |
206 |
Q |
| |
|
||||| ||| | ||||| |||| || || |||| ||| |||||| || || || ||||| || |||||||| ||||||||||| | ||| |||| |
|
|
| T |
22467979 |
atctt---ttggtaaagtgcatgagctggaacgtttatctgaagaacagtccttggaattgtttaaaaagaaggcgttccatgacttggacggagtttgt |
22467883 |
T |
|
| Q |
207 |
ccagaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattaccactagcaattgtagtcattggtggtattttagctcccaaagata |
306 |
Q |
| |
|
|||||||||||| |||| |||||||||||||||||| |||| |||||||||||||| ||||||||||| |||| |||| ||||||| ||| |||| ||| |
|
|
| T |
22467882 |
ccagaaaatctttttgacatatcttccaaaattgttgaaaactgcaaaggattacctctagcaattgttgtcaccggtgatattttatctcgcaaaaata |
22467783 |
T |
|
| Q |
307 |
aaattccaatggaatggtataagtttagtgaaaatataaatgcagagttagaggaatattccataataagaaaatttttaggatttagttaccatgattt |
406 |
Q |
| |
|
|| |||||| ||||||| ||| ||||||||||||||||||| ||||||||||| |||||||| |||||||||| |||||||||||||||||||| |||| |
|
|
| T |
22467782 |
gaaatccaattgaatggtctaaatttagtgaaaatataaatgtagagttagagggatattccacaataagaaaaattttaggatttagttaccataattt |
22467683 |
T |
|
| Q |
407 |
gccttactacctcaagtcatgtttcttgtattttggattatatcctgaagactataaagttcattcaaagacattga |
483 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |
|
|
| T |
22467682 |
accttacaacctcaagtcatgtttcttgtattttggattatatcctgaagactatatagttcattcaaagacgttga |
22467606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 7 - 456
Target Start/End: Complemental strand, 22458620 - 22458171
Alignment:
| Q |
7 |
attttttgcatgatattgaatttgctatgattgataacaaaaagggttctaggatattaatcactacaagaaacatggatgttgcgaatacttgtaagaa |
106 |
Q |
| |
|
|||||| | ||||||| ||||||||||||||||||| |||||||||| || |||||||||||| |||||||||||||||||||| ||| | |||||||| |
|
|
| T |
22458620 |
atttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatcacaacaagaaacatggatgttgcaaatgcatgtaagaa |
22458521 |
T |
|
| Q |
107 |
atcttcttttgttgaagtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgttcaataagaaggcattccatgacttaaatggacgttgt |
206 |
Q |
| |
|
||||||||||||||||||||||||| | ||||||||| ||| | |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||| |
|
|
| T |
22458520 |
atcttcttttgttgaagtgtatgaaatgaaaggtttggctgaacaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttgt |
22458421 |
T |
|
| Q |
207 |
ccagaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattaccactagcaattgtagtcattggtggtattttagctcccaaagata |
306 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||| |||||||||| ||||| ||||||||||||||| ||||||||||||||||| || |||||||| |
|
|
| T |
22458420 |
ccagaaaatcttattgatatatcttttaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttgcaaagata |
22458321 |
T |
|
| Q |
307 |
aaattccaatggaatggtataagtttagtgaaaatataaatgcagagttagaggaatattccataataagaaaatttttaggatttagttaccatgattt |
406 |
Q |
| |
|
|| | || |||||||||||||||||||||||| ||||| ||||||| | ||| ||| | |||| |||| || |||| | ||||||||||| | |
|
|
| T |
22458320 |
gaaatacatcagaatggtataagtttagtgaaaatctaaatatagagttaaaagaagatttgaagataaaaaaaattgtaggtctcggttaccatgatct |
22458221 |
T |
|
| Q |
407 |
gccttactacctcaagtcatgtttcttgtattttggattatatcctgaag |
456 |
Q |
| |
|
| ||||| | |||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
22458220 |
gtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaag |
22458171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 7 - 456
Target Start/End: Complemental strand, 22481601 - 22481152
Alignment:
| Q |
7 |
attttttgcatgatattgaatttgctatgattgataacaaaaagggttctaggatattaatcactacaagaaacatggatgttgcgaatacttgtaagaa |
106 |
Q |
| |
|
|||||| | ||||||| ||||||||||||||||||| |||||||||| || |||||||||||| |||||||||||||||||||| ||| | |||||||| |
|
|
| T |
22481601 |
atttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatcacaacaagaaacatggatgttgcaaatgcatgtaagaa |
22481502 |
T |
|
| Q |
107 |
atcttcttttgttgaagtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgttcaataagaaggcattccatgacttaaatggacgttgt |
206 |
Q |
| |
|
||||||||||||||||||||||||| | ||||||||| ||| | |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||| |
|
|
| T |
22481501 |
atcttcttttgttgaagtgtatgaaatgaaaggtttggctgaacaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttgt |
22481402 |
T |
|
| Q |
207 |
ccagaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattaccactagcaattgtagtcattggtggtattttagctcccaaagata |
306 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||| |||||||||| ||||| ||||||||||||||| ||||||||||||||||| || |||||||| |
|
|
| T |
22481401 |
ccagaaaatcttattgatatatcttttaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttgcaaagata |
22481302 |
T |
|
| Q |
307 |
aaattccaatggaatggtataagtttagtgaaaatataaatgcagagttagaggaatattccataataagaaaatttttaggatttagttaccatgattt |
406 |
Q |
| |
|
|| | || |||||||||||||||||||||||| ||||| ||||||| | ||| ||| | |||| |||| || |||| | ||||||||||| | |
|
|
| T |
22481301 |
gaaatacatcagaatggtataagtttagtgaaaatctaaatatagagttaaaagaagatttgaagataaaaaaaattgtaggtctcggttaccatgatct |
22481202 |
T |
|
| Q |
407 |
gccttactacctcaagtcatgtttcttgtattttggattatatcctgaag |
456 |
Q |
| |
|
| ||||| | |||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
22481201 |
gtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaag |
22481152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 22 - 483
Target Start/End: Complemental strand, 22353926 - 22353467
Alignment:
| Q |
22 |
ttgaatttgctatgattgataacaaaaagggttctaggatattaatcactacaagaaacatggatgttgcgaatacttgtaagaaatcttcttttgttga |
121 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| || |||||||||||| |||||||||| ||||||| | || |||||||||||||| | | | | |
|
|
| T |
22353926 |
ttgaatttgctatgattgataacaaaaatggttgtaagatattaatcacaacaagaaacaaggatgttacagatgattgtaagaaatctt---tcggtaa |
22353830 |
T |
|
| Q |
122 |
agtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgttcaataagaaggcattccatgacttaaatggacgttgtccagaaaatcttatt |
221 |
Q |
| |
|
|||| |||| || || |||| ||| | |||||||||| || ||||| || |||||||| |||| |||||| | ||| ||||||| |||||||| || |
|
|
| T |
22353829 |
agtgcatgagctggaacgtttatctgaaaaacaatctttggatttgtttaaaaagaaggcgttccgtgacttggacggattttgtccaaaaaatcttttt |
22353730 |
T |
|
| Q |
222 |
gatatatcttccaaaattgttaaaaaatgcaaaggattaccactagcaattgtagtcattggtggtattttagctcccaaagataaaattccaatggaat |
321 |
Q |
| |
|
||||||||||| ||||| || ||||||||||||||||||| || |||||||||||||| ||| ||||||| ||| |||||||| || |||||| |||| |
|
|
| T |
22353729 |
tatatatcttccgaaattattgaaaaatgcaaaggattacctctcgcaattgtagtcataggtaatattttatctcgcaaagatagaaatccaattgaat |
22353630 |
T |
|
| Q |
322 |
ggtataagtttagtgaaaatataaatgcagagttagaggaatattccataataagaaaatttttaggatttagttaccatgatttgcc-ttactacctca |
420 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
22353629 |
ggtctaagtttagtgaaaatataaatgcagagttagaggaatattccataataagaaaaattttaggatttagttaccatgatttgcctttactacctca |
22353530 |
T |
|
| Q |
421 |
agtcatgtttcttgtattttggattatatcctgaagactataaagttcattcaaagacattga |
483 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| ||||| ||||| | ||||||| |
|
|
| T |
22353529 |
agtcatgtttcttgtattttggattatatctcgaagactacgaagtttattcagatacattga |
22353467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 17 - 483
Target Start/End: Complemental strand, 22635624 - 22635161
Alignment:
| Q |
17 |
tgatattgaatttgctatgattgataacaaaaagggttctaggatattaatcactacaagaaacatggatgttgcgaatacttgtaagaaatcttctttt |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||| | ||||||||| ||| ||||||| ||||||| || |
|
|
| T |
22635624 |
tgatattgaatttgctatgattgataacaaaaatagttgtaggatattaatcacaacaagaaaaaaggatgttgcaaatgcttgtaataaatctt---tt |
22635528 |
T |
|
| Q |
117 |
gttgaagtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgttcaataagaaggcattccatgacttaaatggacgttgtccagaaaatc |
216 |
Q |
| |
|
| | ||||| || | || || |||| ||| | |||||||||| || ||||| |||||||| |||||| ||| | || || ||| ||| ||| |
|
|
| T |
22635527 |
ggtaaagtgcataatctggaacgtttatctgaaaaacaatctttggaattgtttctaaagaaggcgctccatggcttggacggcatttttcctgaatatc |
22635428 |
T |
|
| Q |
217 |
ttattgatatatcttccaaaattgttaaaaaatgcaaaggattaccactagcaattgtagtcattggtggtattttagctcccaaagataaaattccaat |
316 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||| || ||| || |||| || | |||| |
|
|
| T |
22635427 |
ttattgatatatcttccaaaattgtcgaaaaatgcaaaggattacctctagcaattgtagtcattggtgatattctatctcgcacggatagaaattcaat |
22635328 |
T |
|
| Q |
317 |
ggaatggtataagtttagtgaaaatataaatgcagagttagaggaatattccataataagaaaatttttaggatttagttaccatgatttgccttactac |
416 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||| | |||| |
|
|
| T |
22635327 |
agaatggtcgaagtttagtgaaaatataaatgcagagttagaggaatattccatgataagaaaaattttaggacttagttaccatgatttgccatgctac |
22635228 |
T |
|
| Q |
417 |
ctcaagtcatgtttcttgtattttggattatatcctgaagactataaagttcattcaaagacattga |
483 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||| |
|
|
| T |
22635227 |
ctcaagtcatgtttcttgtattttggattatatcctgaagactatatagttcgttcaaaaacattga |
22635161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 34 - 293
Target Start/End: Complemental strand, 22621018 - 22620756
Alignment:
| Q |
34 |
tgattgataacaaaaagggttctaggatattaatcactacaagaaacatggatgttgcgaatacttgtaagaaatcttcttttgttgaagtgtatgaact |
133 |
Q |
| |
|
|||||||||| ||||| || || |||||| || || ||||||| ||||||||||| | | |||||| |||||||||||| |||| ||| ||||||| |
|
|
| T |
22621018 |
tgattgataataaaaatgggagtaagatattgattacaacaagaagtatggatgttgctatttattgtaaaaaatcttcttttattgaggtgcatgaact |
22620919 |
T |
|
| Q |
134 |
aaaaggtttgactgtagaacaatcttttgagttgttcaataagaaggcattcca---tgacttaaatggacgttgtccagaaaatcttattgatatatct |
230 |
Q |
| |
|
| || ||| |||| ||||||||||||||||||||||||||||||| ||| | |||||| ||||| |||||||| || |||| |||||||||||| |
|
|
| T |
22620918 |
acaacctttaactgaggaacaatcttttgagttgttcaataagaaggtatttcgatttgactttgatggaagttgtccaaaagatctaattgatatatct |
22620819 |
T |
|
| Q |
231 |
tccaaaattgttaaaaaatgcaaaggattaccactagcaattgtagtcattggtggtatttta |
293 |
Q |
| |
|
||| |||||| || ||||||||| || ||||||||||||||||||| | |||||||| ||||| |
|
|
| T |
22620818 |
tccgaaattgctagaaaatgcaagggtttaccactagcaattgtagccgttggtggtctttta |
22620756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 59 - 274
Target Start/End: Complemental strand, 22657145 - 22656927
Alignment:
| Q |
59 |
gatattaatcactacaagaaacatggatgttgcgaatacttgtaagaaatcttcttttgttgaagtgtatgaactaaaaggtttgactgtagaacaatct |
158 |
Q |
| |
|
|||||| || || |||||||| |||||||||||| ||||||||||||||||||| |||||||| |||||||| | ||| || |||||||||||| |
|
|
| T |
22657145 |
gatatttattacaacaagaaatatggatgttgcggtgtattgtaagaaatcttcttttattgaagtgcatgaactacatcctttaacagtagaacaatct |
22657046 |
T |
|
| Q |
159 |
tttgagttgttcaataagaaggcattcca---tgacttaaatggacgttgtccagaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaag |
255 |
Q |
| |
|
||||||||||| ||||||||||| || || |||||| |||||| |||||||| || | || ||||||||||||||| |||||| || ||||||||||| |
|
|
| T |
22657045 |
tttgagttgtttaataagaaggcctttcaatttgactttaatggatgttgtccaaaagagctcattgatatatcttccgaaattgctagaaaatgcaaag |
22656946 |
T |
|
| Q |
256 |
gattaccactagcaattgt |
274 |
Q |
| |
|
| ||||| || |||||||| |
|
|
| T |
22656945 |
gtttaccgctggcaattgt |
22656927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 382 - 484
Target Start/End: Complemental strand, 30989049 - 30988947
Alignment:
| Q |
382 |
ttttaggatttagttaccatgatttgccttactacctcaagtcatgtttcttgtattttggattatatcctgaagactataaagttcattcaaagacatt |
481 |
Q |
| |
|
||||||| || |||||| ||||||||||||||| ||||||||||| || |||||||||||| ||||||| ||||| ||| ||||| | ||||||| ||| |
|
|
| T |
30989049 |
ttttaggcttaagttacgatgatttgccttactctctcaagtcatgcttgttgtattttggaatatatccagaagattatgaagttaaatcaaagagatt |
30988950 |
T |
|
| Q |
482 |
gat |
484 |
Q |
| |
|
||| |
|
|
| T |
30988949 |
gat |
30988947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 34 - 287
Target Start/End: Complemental strand, 22648288 - 22648032
Alignment:
| Q |
34 |
tgattgataacaaaaagggttctaggatattaatcactacaagaaacatggatgttgcga-atacttgtaagaaatcttcttttgttgaagtgtatgaac |
132 |
Q |
| |
|
|||||||||| ||||| || || |||||| || || |||||||| ||||||||||| | ||| |||||||||||||||||| |||||||||||||| |
|
|
| T |
22648288 |
tgattgataataaaaatgggagtaagatatttattacaacaagaaatatggatgttgccatata-ttgtaagaaatcttctttcattgaagtgtatgaat |
22648190 |
T |
|
| Q |
133 |
taaaaggtttgactgtagaacaatcttttgagttgttcaataagaaggcattcca---tgacttaaatggacgttgtccagaaaatcttattgatatatc |
229 |
Q |
| |
|
| || ||| || ||||||||||||||||||||||| |||||| |||| || |||| |||||| |||||||| || | || ||||||||||| |
|
|
| T |
22648189 |
tgcaacctttaacaaatgaacaatcttttgagttgttcaacaagaagacatttcagtttgacaacaatggatgttgtccaaaagaactcattgatatatc |
22648090 |
T |
|
| Q |
230 |
ttccaaaattgttaaaaaatgcaaaggattaccactagcaattgtagtcattggtggt |
287 |
Q |
| |
|
|| ||||| || ||||||||| || ||||| || |||||||| | |||||||||| |
|
|
| T |
22648089 |
ttttgaaatttctagaaaatgcaagggtttaccgctggcaattgttgccattggtggt |
22648032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 400 - 477
Target Start/End: Original strand, 21931161 - 21931238
Alignment:
| Q |
400 |
atgatttgccttactacctcaagtcatgtttcttgtattttggattatatcctgaagactataaagttcattcaaaga |
477 |
Q |
| |
|
|||||||||||||||| |||||| |||| ||||||||||||||| ||||||| ||||| ||| ||||| | ||||||| |
|
|
| T |
21931161 |
atgatttgccttactatctcaagccatgcttcttgtattttggagtatatccagaagattatgaagttaaatcaaaga |
21931238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 423 - 484
Target Start/End: Complemental strand, 22620599 - 22620538
Alignment:
| Q |
423 |
tcatgtttcttgtattttggattatatcctgaagactataaagttcattcaaagacattgat |
484 |
Q |
| |
|
|||||||| |||||||||||||||||||| ||||| ||||||||| ||||||||| |||||| |
|
|
| T |
22620599 |
tcatgtttattgtattttggattatatccagaagattataaagttgattcaaagagattgat |
22620538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 22053446 - 22053522
Alignment:
| Q |
400 |
atgatttgccttactacctcaagtcatgtttcttgtattttggattatatcctgaagactataaagttcattcaaag |
476 |
Q |
| |
|
|||||||||||||||| ||| ||||||| || |||||||||||| ||||||| ||||| ||| ||||| |||||||| |
|
|
| T |
22053446 |
atgatttgccttactatctcgagtcatgcttgttgtattttggagtatatccagaagattatgaagttaattcaaag |
22053522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 451
Target Start/End: Original strand, 22180157 - 22180208
Alignment:
| Q |
400 |
atgatttgccttactacctcaagtcatgtttcttgtattttggattatatcc |
451 |
Q |
| |
|
|||||||||||||||| |||||||||||||| |||||||||||| ||||||| |
|
|
| T |
22180157 |
atgatttgccttactatctcaagtcatgtttgttgtattttggagtatatcc |
22180208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 185
Target Start/End: Complemental strand, 30989436 - 30989258
Alignment:
| Q |
7 |
attttttgcatgatattgaatttgctatgattgataacaaaaagggttctaggatattaatcactacaagaaacatggatgttgcgaatacttgtaagaa |
106 |
Q |
| |
|
|||||| | ||||||||||||||||| | |||||||| ||||| || || |||||| ||||| ||||||||| | ||||||| | ||||||| || |
|
|
| T |
30989436 |
atttttgggatgatattgaatttgctgtaattgataataaaaatggaagtaagatatttatcacaacaagaaacctagatgttgtgttgtcttgtaaaaa |
30989337 |
T |
|
| Q |
107 |
atcttcttttgttgaagtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgttcaataagaaggcattc |
185 |
Q |
| |
|
|||||||| | |||||||| ||| | || ||| | || | |||||||||| |||||||||||||||||||||||| |
|
|
| T |
30989336 |
atcttcttatattgaagtgcttgagttgcaacctttaaatgaacaacaatctttggagttgttcaataagaaggcattc |
30989258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 400 - 457
Target Start/End: Original strand, 21937893 - 21937950
Alignment:
| Q |
400 |
atgatttgccttactacctcaagtcatgtttcttgtattttggattatatcctgaaga |
457 |
Q |
| |
|
|||||||||||||||| ||||||||||| || |||||||||||| ||||||| ||||| |
|
|
| T |
21937893 |
atgatttgccttactatctcaagtcatgcttgttgtattttggagtatatccagaaga |
21937950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 400 - 477
Target Start/End: Original strand, 22028740 - 22028817
Alignment:
| Q |
400 |
atgatttgccttactacctcaagtcatgtttcttgtattttggattatatcctgaagactataaagttcattcaaaga |
477 |
Q |
| |
|
|||||||||||||||| |||||| |||| || |||||||||||| ||||||| ||||| ||| ||||| | ||||||| |
|
|
| T |
22028740 |
atgatttgccttactatctcaagccatgcttgttgtattttggagtatatccagaagattatgaagttaaatcaaaga |
22028817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 400 - 457
Target Start/End: Original strand, 22115825 - 22115882
Alignment:
| Q |
400 |
atgatttgccttactacctcaagtcatgtttcttgtattttggattatatcctgaaga |
457 |
Q |
| |
|
|||||||||||||||| |||||||||||||| |||||||||||| |||| || ||||| |
|
|
| T |
22115825 |
atgatttgccttactatctcaagtcatgtttgttgtattttggagtatacccagaaga |
22115882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 400 - 477
Target Start/End: Original strand, 22187728 - 22187805
Alignment:
| Q |
400 |
atgatttgccttactacctcaagtcatgtttcttgtattttggattatatcctgaagactataaagttcattcaaaga |
477 |
Q |
| |
|
|||||||||||||||| |||||| |||| || |||||||||||| ||||||| ||||| ||| ||||| | ||||||| |
|
|
| T |
22187728 |
atgatttgccttactatctcaagccatgcttgttgtattttggagtatatccagaagattatgaagttaaatcaaaga |
22187805 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 202 - 274
Target Start/End: Complemental strand, 22615204 - 22615132
Alignment:
| Q |
202 |
gttgtccagaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattaccactagcaattgt |
274 |
Q |
| |
|
|||||||| || | || ||||||||||||| | |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
22615204 |
gttgtccaaaagagctcattgatatatcttatgatattgttaaaaaatgcaaaggtttaccactagcaattgt |
22615132 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 400 - 467
Target Start/End: Original strand, 22105448 - 22105515
Alignment:
| Q |
400 |
atgatttgccttactacctcaagtcatgtttcttgtattttggattatatcctgaagactataaagtt |
467 |
Q |
| |
|
|||||||||||||||| ||||||||||| || ||||| |||||| ||||||| ||||| ||| ||||| |
|
|
| T |
22105448 |
atgatttgccttactatctcaagtcatgcttgttgtactttggagtatatccagaagattatgaagtt |
22105515 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 400 - 457
Target Start/End: Original strand, 22035257 - 22035314
Alignment:
| Q |
400 |
atgatttgccttactacctcaagtcatgtttcttgtattttggattatatcctgaaga |
457 |
Q |
| |
|
|||||||||||||||| |||||| |||| || |||||||||||| ||||||| ||||| |
|
|
| T |
22035257 |
atgatttgccttactatctcaagccatgcttgttgtattttggagtatatccagaaga |
22035314 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 22187464 - 22187501
Alignment:
| Q |
148 |
tagaacaatcttttgagttgttcaataagaaggcattc |
185 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
22187464 |
tagaacaatctttggagttgttcaataagaaggcattc |
22187501 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 400 - 461
Target Start/End: Complemental strand, 22614997 - 22614936
Alignment:
| Q |
400 |
atgatttgccttactacctcaagtcatgtttcttgtattttggattatatcctgaagactat |
461 |
Q |
| |
|
|||||||||||||||| || | |||||||| ||||||||||||||||| || ||||||||| |
|
|
| T |
22614997 |
atgatttgccttactatcttagatcatgtttgttgtattttggattatacccagaagactat |
22614936 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 400 - 477
Target Start/End: Complemental strand, 22656792 - 22656715
Alignment:
| Q |
400 |
atgatttgccttactacctcaagtcatgtttcttgtattttggattatatcctgaagactataaagttcattcaaaga |
477 |
Q |
| |
|
|||||||||||| || || ||||||||||| |||||||||||| ||||||| ||||| ||| ||||| | ||||||| |
|
|
| T |
22656792 |
atgatttgcctttttatcttaagtcatgtttgttgtattttggaatatatccagaagattatgaagttgaatcaaaga |
22656715 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 185
Target Start/End: Original strand, 21930899 - 21930934
Alignment:
| Q |
150 |
gaacaatcttttgagttgttcaataagaaggcattc |
185 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||| |
|
|
| T |
21930899 |
gaacaatctttggagttgttcaataagaaggcattc |
21930934 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 185
Target Start/End: Original strand, 21937631 - 21937666
Alignment:
| Q |
150 |
gaacaatcttttgagttgttcaataagaaggcattc |
185 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||| |
|
|
| T |
21937631 |
gaacaatctttggagttgttcaataagaaggcattc |
21937666 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 467
Target Start/End: Original strand, 21946364 - 21946431
Alignment:
| Q |
400 |
atgatttgccttactacctcaagtcatgtttcttgtattttggattatatcctgaagactataaagtt |
467 |
Q |
| |
|
|||||||||||| ||| ||||||||||| || || ||||||||| ||||||| ||||| ||| ||||| |
|
|
| T |
21946364 |
atgatttgccttgctatctcaagtcatgcttgttttattttggagtatatccagaagattatgaagtt |
21946431 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 467
Target Start/End: Complemental strand, 22647938 - 22647843
Alignment:
| Q |
372 |
ataagaaaatttttaggatttagttaccatgatttgccttactacctcaagtcatgtttcttgtattttggattatatcctgaagactataaagtt |
467 |
Q |
| |
|
||||| ||| |||||||||| || ||| |||||||||||| ||| || || |||||||||| ||||||||| | ||||| ||||| ||| ||||| |
|
|
| T |
22647938 |
ataagcaaaattttaggattcagctacaatgatttgcctttctatcttaaaccatgtttcttatattttggaatgtatcccgaagattatgaagtt |
22647843 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 16 - 293
Target Start/End: Complemental strand, 2305607 - 2305327
Alignment:
| Q |
16 |
atgatattgaatttgctatgattgataacaaaaagggttctaggatattaatcactacaagaaacatggatgttgcga-atacttgtaagaaatcttctt |
114 |
Q |
| |
|
|||| ||||||| |||||||| |||| | ||||| ||| || |||||| || || |||||||| ||||||||||| | ||| ||||||||||||||||| |
|
|
| T |
2305607 |
atgagattgaatatgctatgagtgatcataaaaatggtagtaagatatttattaccacaagaaatatggatgttgccatata-ttgtaagaaatcttctt |
2305509 |
T |
|
| Q |
115 |
ttgttgaagtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgttcaataagaaggcattcca---tgacttaaatggacgttgtccaga |
211 |
Q |
| |
|
|| || ||||| |||||||| || ||| |||| ||| ||| ||||| ||||| |||||||||||||| || |||||| | ||| |||||||| | |
|
|
| T |
2305508 |
ttattcaagtgcatgaactacaacttttaactgaggaaaaataatttgatttgtttaataagaaggcatttcaatttgactttgaaggatgttgtccaaa |
2305409 |
T |
|
| Q |
212 |
aaatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattaccactagcaattgtagtcattggtggtatttta |
293 |
Q |
| |
|
| | || ||||||||||||| |||| | || || ||||| || ||||| |||||||||||| ||||||||| ||||| |
|
|
| T |
2305408 |
agagctcattgatatatcttttgaaatcgctaggaagtgcaagggcttacccctagcaattgtaactattggtggtctttta |
2305327 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 16 - 274
Target Start/End: Original strand, 34989561 - 34989822
Alignment:
| Q |
16 |
atgatattgaatttgctatgattgataacaaaaagggttctaggatattaatcactacaagaaacatggatgttgcgaatacttgtaagaaatcttcttt |
115 |
Q |
| |
|
|||| ||||||| || | ||| |||||| ||||| ||| || |||||| || || |||||||| | ||||||||| | ||||||||||||||| || |
|
|
| T |
34989561 |
atgagattgaatatgttgtgagtgataataaaaatggtagtaagatatttattaccacaagaaataaggatgttgccatgtattgtaagaaatcttcatt |
34989660 |
T |
|
| Q |
116 |
tgttgaagtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgttcaataagaaggcattcca---tgacttaaatggacgttgtccagaa |
212 |
Q |
| |
|
| |||||||| |||||||| || || |||| ||||||||| |||| |||||||||||||||||||| || |||||| | ||| |||||||| || |
|
|
| T |
34989661 |
tattgaagtgcatgaactacaaccattaactgaagaacaatcaattgatttgttcaataagaaggcatttcaatttgacttggaaggatgttgtccaaaa |
34989760 |
T |
|
| Q |
213 |
aatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattaccactagcaattgt |
274 |
Q |
| |
|
| || ||||||||| ||| |||||| || || ||||| || ||||||||||||||||| |
|
|
| T |
34989761 |
gagctcattgatatagcttttgaaattgctaggaagtgcaagggcttaccactagcaattgt |
34989822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1439 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold1439
Description:
Target: scaffold1439; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 98 - 184
Target Start/End: Complemental strand, 1633 - 1547
Alignment:
| Q |
98 |
ttgtaagaaatcttcttttgttgaagtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgttcaataagaaggcatt |
184 |
Q |
| |
|
||||||||||||||||||| |||||||| |||||||| || ||| |||| |||| |||| ||||| ||||| |||||||||||||| |
|
|
| T |
1633 |
ttgtaagaaatcttcttttattgaagtgcatgaactacaacctttaactgaagaaaaatcatttgatttgtttaataagaaggcatt |
1547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 40580337 - 40580500
Alignment:
| Q |
21 |
attgaatttgctatgattgataacaaaaagggttctaggatattaatcactacaagaaacatggatgttgc-gaatacttgtaagaaatcttcttttgtt |
119 |
Q |
| |
|
||||||| |||||||| |||||| ||||| ||| || |||||| || || |||||| ||||||||||| | || ||||||||||| ||||||| || |
|
|
| T |
40580337 |
attgaatatgctatgagtgataataaaaatggtagtaagatatttattacctcaagaagtatggatgttgcagtgta-ttgtaagaaattttcttttatt |
40580435 |
T |
|
| Q |
120 |
gaagtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgttcaataagaaggcatt |
184 |
Q |
| |
|
|||||| |||||||| || ||| || | |||| |||| ||||| |||||||| ||||||||||| |
|
|
| T |
40580436 |
gaagtgcatgaactacaacctttaacagaagaaaaatcatttgatttgttcaacaagaaggcatt |
40580500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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