View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10257_5 (Length: 380)
Name: NF10257_5
Description: NF10257
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10257_5 |
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Alignment Details
Target: chr3 (Bit Score: 341; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 341; E-Value: 0
Query Start/End: Original strand, 11 - 355
Target Start/End: Complemental strand, 7333589 - 7333245
Alignment:
| Q |
11 |
aatgaggtgatagggagtggagacttatctcgggtaggagtcatagactctggtatttccctttgttaattcttttgttgctgtcagagcttttagctca |
110 |
Q |
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| T |
7333589 |
aatgaggtgatagggagtggagacttatctcgggtaggagtcatagactctggtatttccctttgttaattcttttgttgctgtcagagcttttagctca |
7333490 |
T |
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| Q |
111 |
tacttccatcaataaaatctctattctactgatacttaagttttcggtttctatcattttctagatatataagaaaaaacaaaattcattttaaagttcg |
210 |
Q |
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| T |
7333489 |
tacttccatcaataaaatctctattctactgatacttaagttttcggtttctatcattttctagatatataagaaaaaacaaaattcattttaaagttcg |
7333390 |
T |
|
| Q |
211 |
gttgtaaaacacgaaacatggtgcatcaatcagaattggtccgaattgggttgattctcaactggtttgatttgatagagttcaacttgcaaaccagttt |
310 |
Q |
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| T |
7333389 |
gttgtaaaacacgaaacatggtgcatcaatcagaatcggtccgaattgggttgattctcaactggtttgatttgatagagttcaacttgcaaaccagttt |
7333290 |
T |
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| Q |
311 |
ggttttccatgctgaactgaaccaaaaccacagttaccgagtaaa |
355 |
Q |
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| T |
7333289 |
ggttttccatgctgaactgaaccaaaaccacagttaccgagtaaa |
7333245 |
T |
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