View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10257_8 (Length: 339)
Name: NF10257_8
Description: NF10257
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10257_8 |
 |  |
|
| [»] chr8 (5 HSPs) |
 |  |
|
| [»] scaffold0493 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr8 (Bit Score: 258; Significance: 1e-143; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 57 - 339
Target Start/End: Complemental strand, 38341934 - 38341652
Alignment:
| Q |
57 |
atattgtaaaggggaaacccttggaggagagattatctcccattctttcctatttcttagtaaaagtgttctttctattccattcaattgttgggttctt |
156 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38341934 |
atattgtaaaggggaaacccttggaggagagattatctcccattctttcctatttcttagtaaaagtgttctttctattccattcaattgttgggttctt |
38341835 |
T |
 |
| Q |
157 |
aacaatacatcattttatttgcaatctttctcagaatgctgacgggagnnnnnnncctctaaagaagcataaaagatctcctattgttggtgtggaggat |
256 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38341834 |
aacaatacatcattttatttgcaatctttctcagaatgctaacgggagaaaaaaacctctaaagaagcataaaagatctcctattgttggtgtggaggat |
38341735 |
T |
 |
| Q |
257 |
aaaggtagtaaaacctcaaggcagccgagaaaacaagcagttcgtgaactgtctaaaaacccatttaacaaggctgttgaggt |
339 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38341734 |
aaaggtagtaaaacctcaaggcagccgagaaaacaagcagttcgtgaactgtctaaaaacccatttaacaaggctgttgaggt |
38341652 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 213 - 296
Target Start/End: Complemental strand, 38334025 - 38333942
Alignment:
| Q |
213 |
ctctaaagaagcataaaagatctcctattgttggtgtggaggataaaggtagtaaaacctcaaggcagccgagaaaacaagcag |
296 |
Q |
| |
|
|||||||||||||||||| |||| |||||| ||||||||||||||||||| ||||| |||||||| | || ||||||||||||| |
|
|
| T |
38334025 |
ctctaaagaagcataaaatatcttctattgctggtgtggaggataaaggtggtaaatcctcaaggaaaccaagaaaacaagcag |
38333942 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 31
Target Start/End: Original strand, 16515088 - 16515117
Alignment:
| Q |
2 |
agagtatgtgtataaataagagaacacaaa |
31 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
16515088 |
agagtatgtgtataaataagagaacacaaa |
16515117 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 38341971 - 38341932
Alignment:
| Q |
1 |
gagagtatgtgtataaataagagaacacaaaaggttagata |
41 |
Q |
| |
|
||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
38341971 |
gagagtatgtgtataaataggagaacac-aaaggttagata |
38341932 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 126
Target Start/End: Complemental strand, 45000198 - 45000131
Alignment:
| Q |
58 |
tattgtaaaggggaaacccttggaggagagattatctcccattctttcctatttcttagtaaaagtgtt |
126 |
Q |
| |
|
|||||| ||||||||||||||| |||||| ||| ||||| |||| |||||||||||| ||||| |||| |
|
|
| T |
45000198 |
tattgtgaaggggaaacccttg-aggagatattctctcctgttctatcctatttcttaataaaattgtt |
45000131 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 37549926 - 37550029
Alignment:
| Q |
58 |
tattgtaaaggggaaacccttggaggagagattatctcccattctttcctatttcttagtaaaagtgttctttctattccattcaattgttgggttctta |
157 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||||||||| ||||| || ||||||||| ||||||||||||||||||||||| ||| |||||||| || |
|
|
| T |
37549926 |
tattgtgaaggggaaactcttggaggagagattatctcctattctatcatatttcttaaataaagtgttctttctattccattccattcttgggttccta |
37550025 |
T |
 |
| Q |
158 |
acaa |
161 |
Q |
| |
|
|||| |
|
|
| T |
37550026 |
acaa |
37550029 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 135
Target Start/End: Complemental strand, 20642114 - 20642070
Alignment:
| Q |
92 |
tctcccattctttccta-tttcttagtaaaagtgttctttctatt |
135 |
Q |
| |
|
||||||||||||||||| ||||||| ||||||| ||||||||||| |
|
|
| T |
20642114 |
tctcccattctttcctattttcttaataaaagttttctttctatt |
20642070 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 48507450 - 48507494
Alignment:
| Q |
58 |
tattgtaaaggggaaacccttggaggagagattatctcccattct |
102 |
Q |
| |
|
|||||| || ||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
48507450 |
tattgtgaaagggaaacccttggaggagagattctctcctattct |
48507494 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 52; Significance: 9e-21; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 37422960 - 37422857
Alignment:
| Q |
58 |
tattgtaaaggggaaacccttggaggagagattatctcccattctttcctatttcttagtaaaagtgttctttctattccattcaattgttgggttctta |
157 |
Q |
| |
|
|||||| |||| ||||||||||||||||||||| ||||| ||||| ||||||||||| |||||||||||||||| | |||||||| |||||||| || |
|
|
| T |
37422960 |
tattgtgaaggtgaaacccttggaggagagattctctcctattctatcctatttcttcataaaagtgttctttctttggaattcaatttttgggttccta |
37422861 |
T |
 |
| Q |
158 |
acaa |
161 |
Q |
| |
|
|||| |
|
|
| T |
37422860 |
acaa |
37422857 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 21449764 - 21449705
Alignment:
| Q |
1 |
gagagtatgtgtataaataagagaacacaaaaggttagataaagagtatcttttgaatattgtaa |
65 |
Q |
| |
|
||||||||||||||||||| ||||||| |||| || |||||||||||||||||||||||||| |
|
|
| T |
21449764 |
gagagtatgtgtataaataggagaaca-aaaatgt----taaagagtatcttttgaatattgtaa |
21449705 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 115
Target Start/End: Original strand, 13728636 - 13728685
Alignment:
| Q |
67 |
ggggaaacccttggaggagaga-ttatctcccattctttcctatttctta |
115 |
Q |
| |
|
|||||||||||||||||||| | || ||||| |||||||||||||||||| |
|
|
| T |
13728636 |
ggggaaacccttggaggagatatttctctcctattctttcctatttctta |
13728685 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 160
Target Start/End: Complemental strand, 41873654 - 41873557
Alignment:
| Q |
64 |
aaaggggaaacccttggaggagagattatctcccattctttccta-tttcttagtaaaagtgttctttctattccattcaattgttgggttcttaaca |
160 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| |||||| || ||||||| | | ||||||||||||||||||| | |||||||| ||||| |
|
|
| T |
41873654 |
aaaggggaaactcttggaggagagattatctcctggtctttcttattttcttaatttagtggttctttctattccattcagctcttgggttcctaaca |
41873557 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 132
Target Start/End: Complemental strand, 34957970 - 34957894
Alignment:
| Q |
58 |
tattgtaaaggggaaacccttggaggagaga-ttatctcccattctttcctatttc-ttagtaaaagtgttctttct |
132 |
Q |
| |
|
|||||| |||| | ||||||||||||||||| || ||||| ||| ||||||||||| ||| ||||||||||| |||| |
|
|
| T |
34957970 |
tattgtgaaggtgtaacccttggaggagagatttctctcctattatttcctatttctttattaaaagtgttcgttct |
34957894 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 58 - 162
Target Start/End: Original strand, 16502583 - 16502688
Alignment:
| Q |
58 |
tattgtaaaggggaaacccttggaggagaga-ttatctcccattctttcctatttcttagtaaaagtgttctttctattccattcaattgttgggttctt |
156 |
Q |
| |
|
|||||| |||||||||||||||||||||||| || ||||| ||||| || ||||||||| || |||||||||||||| || ||||| |||||||| | |
|
|
| T |
16502583 |
tattgtgaaggggaaacccttggaggagagatttctctcctattctatcatatttcttaatataagtgttctttctaaagaatccaattcttgggttcct |
16502682 |
T |
 |
| Q |
157 |
aacaat |
162 |
Q |
| |
|
|||||| |
|
|
| T |
16502683 |
aacaat |
16502688 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 53504679 - 53504782
Alignment:
| Q |
58 |
tattgtaaaggggaaacccttggaggagagattatctcccattctttcctatttcttagtaaaagtgttctttctattccattcaattgttgggttctta |
157 |
Q |
| |
|
|||||| ||||||||||||||||||||| |||| || || |||| || ||||||||| ||||||| |||||||||||||||||| || ||||| || |
|
|
| T |
53504679 |
tattgtgaaggggaaacccttggaggagtgattctcccctgttctatcatatttcttaaattaagtgttttttctattccattcaattatttggttccta |
53504778 |
T |
 |
| Q |
158 |
acaa |
161 |
Q |
| |
|
|||| |
|
|
| T |
53504779 |
acaa |
53504782 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 115
Target Start/End: Complemental strand, 38870639 - 38870592
Alignment:
| Q |
68 |
gggaaacccttggaggagagattatctcccattctttcctatttctta |
115 |
Q |
| |
|
|||||||||||| |||||||||||||||||| ||| |||||||||||| |
|
|
| T |
38870639 |
gggaaacccttgcaggagagattatctcccactctatcctatttctta |
38870592 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 58 - 132
Target Start/End: Complemental strand, 40020752 - 40020673
Alignment:
| Q |
58 |
tattgtaaaggggaaacccttggaggagagatt-atctccc-attctttcctattt---cttagtaaaagtgttctttct |
132 |
Q |
| |
|
|||||| |||||||| |||||| |||||||||| ||||||| |||||||||||||| |||| |||||||||||||||| |
|
|
| T |
40020752 |
tattgtgaaggggaatcccttgaaggagagatttatctccctattctttcctattttttcttaataaaagtgttctttct |
40020673 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 154
Target Start/End: Complemental strand, 3479248 - 3479153
Alignment:
| Q |
58 |
tattgtaaaggggaaacccttggaggagagattatctcccattctttcctatttcttagtaaaagtgttctttctattccattcaattgttgggttc |
154 |
Q |
| |
|
|||||| ||||||||||||||| |||||||||| |||| |||| || ||||||||| |||||||||||||| || |||||||| |||||||| |
|
|
| T |
3479248 |
tattgtcaaggggaaacccttg-aggagagattctctcttattccatcatatttcttaaataaagtgttctttcttttgaattcaattcttgggttc |
3479153 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 38870727 - 38870697
Alignment:
| Q |
1 |
gagagtatgtgtataaataagagaacacaaa |
31 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
38870727 |
gagagtatgtgtataaataagagaacacaaa |
38870697 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 49445073 - 49445045
Alignment:
| Q |
1 |
gagagtatgtgtataaataagagaacaca |
29 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
49445073 |
gagagtatgtgtataaataagagaacaca |
49445045 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 59 - 154
Target Start/End: Complemental strand, 19607304 - 19607208
Alignment:
| Q |
59 |
attgtaaaggggaaacccttggaggagagattatctcccattctttccta-tttcttagtaaaagtgttctttctattccattcaattgttgggttc |
154 |
Q |
| |
|
||||| |||||||||||||||||||||||||| ||||| | |||||| || ||||||| | ||| |||||||| |||||||| ||||| ||||||| |
|
|
| T |
19607304 |
attgtgaaggggaaacccttggaggagagattctctcctactctttcttattttcttaattaaattgttctttatattccatccaattactgggttc |
19607208 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 53 - 129
Target Start/End: Original strand, 11046900 - 11046978
Alignment:
| Q |
53 |
ttgaatattgtaaaggggaaacccttggaggagaga-ttatctcccattctttccta-tttcttagtaaaagtgttctt |
129 |
Q |
| |
|
||||| ||||| |||||||||||||||||| ||||| |||||||| ||||||||||| ||||||| |||||| |||||| |
|
|
| T |
11046900 |
ttgaacattgtgaaggggaaacccttggagtagagatttatctcctattctttcctattttcttaataaaagagttctt |
11046978 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 162
Target Start/End: Complemental strand, 13818895 - 13818793
Alignment:
| Q |
60 |
ttgtaaaggggaaacccttggaggagagattatctcccattctttcctatttcttagtaaaagtgttctttctattccattcaattgttgggttcttaac |
159 |
Q |
| |
|
|||| ||||||||||||||| |||||||||| ||||||||| | || |||||||| | ||||| |||||||| | |||||||| ||||| || |||| |
|
|
| T |
13818895 |
ttgtgaaggggaaacccttgaaggagagattctctcccattttatcatatttcttcatgaaagttttctttctttcgaattcaattcttgggctcctaac |
13818796 |
T |
 |
| Q |
160 |
aat |
162 |
Q |
| |
|
||| |
|
|
| T |
13818795 |
aat |
13818793 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0493 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0493
Description:
Target: scaffold0493; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 115
Target Start/End: Complemental strand, 4234 - 4167
Alignment:
| Q |
48 |
atcttttgaatattgtaaaggggaaacccttggaggagagattatctcccattctttcctatttctta |
115 |
Q |
| |
|
|||||||||||||||| || |||||||||||| |||||||||| || || ||||| || ||||||||| |
|
|
| T |
4234 |
atcttttgaatattgtgaatgggaaacccttgaaggagagattctcccctattctatcatatttctta |
4167 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 45249274 - 45249228
Alignment:
| Q |
58 |
tattgtaaaggggaaacccttggaggagagattatctcccattcttt |
104 |
Q |
| |
|
|||||| |||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
45249274 |
tattgtgaaggggaaacccttggaggatagattttctcccattcttt |
45249228 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 58 - 145
Target Start/End: Complemental strand, 44208595 - 44208508
Alignment:
| Q |
58 |
tattgtaaaggggaaacccttggaggagagattatctcccattctttcctatttcttagtaaaagtgttctttctattccattcaatt |
145 |
Q |
| |
|
|||||| |||||||||| ||||||||| ||||| |||| ||||| || | ||||||| ||||| ||||||||||| ||||||||| |
|
|
| T |
44208595 |
tattgtgaaggggaaactcttggaggaaagattctctcttattctatcgtgtttcttaaataaagtattctttctatttcattcaatt |
44208508 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 160
Target Start/End: Original strand, 29465695 - 29465797
Alignment:
| Q |
58 |
tattgtaaaggggaaacccttggaggagagattatctcccattctttcctatttcttagtaaaagtgttctttctattccattcaattgttgggttctta |
157 |
Q |
| |
|
|||||| |||||||||| |||||||||||||| ||| ||| || ||||||||| ||||||||||||||||||||||||||| |||| ||| || |
|
|
| T |
29465695 |
tattgtgaaggggaaacggttggaggagagattctcttttcgtctatcatatttcttaaataaagtgttctttctattccattcaattcttggattccta |
29465794 |
T |
 |
| Q |
158 |
aca |
160 |
Q |
| |
|
||| |
|
|
| T |
29465795 |
aca |
29465797 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 65 - 161
Target Start/End: Original strand, 15047156 - 15047253
Alignment:
| Q |
65 |
aaggggaaacccttggaggagaga-ttatctcccattctttcctatttcttagtaaaagtgttctttctattccattcaattgttgggttcttaacaa |
161 |
Q |
| |
|
|||||||||||||||||||||||| || ||||| ||||||| ||| || | | |||||||||||||||| | || ||||| |||||||| |||||| |
|
|
| T |
15047156 |
aaggggaaacccttggaggagagatttctctcctattcttttctacttatcaataaaagtgttctttctttggaatccaattcttgggttcctaacaa |
15047253 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 29075674 - 29075719
Alignment:
| Q |
57 |
atattgtaaaggggaaacccttggaggagagattatctcccattct |
102 |
Q |
| |
|
||||||| ||||||||| |||||||||||||||||||||| ||||| |
|
|
| T |
29075674 |
atattgtgaaggggaaaaccttggaggagagattatctccaattct |
29075719 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 128
Target Start/End: Original strand, 31673991 - 31674063
Alignment:
| Q |
58 |
tattgtaaaggggaaacccttggaggagagattatctcccat--tctttcctatttcttagtaaaagtgttct |
128 |
Q |
| |
|
|||||| |||||||| ||||||||||||||||| ||||| || | | |||||||| ||| |||||||||||| |
|
|
| T |
31673991 |
tattgtgaaggggaaccccttggaggagagattctctcctattatatatcctattttttaataaaagtgttct |
31674063 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 135
Target Start/End: Original strand, 21524218 - 21524262
Alignment:
| Q |
92 |
tctcccattctttccta-tttcttagtaaaagtgttctttctatt |
135 |
Q |
| |
|
||||||||||||||||| ||||||| |||| |||||||||||||| |
|
|
| T |
21524218 |
tctcccattctttcctattttcttaataaatgtgttctttctatt |
21524262 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 135
Target Start/End: Original strand, 21534778 - 21534822
Alignment:
| Q |
92 |
tctcccattctttccta-tttcttagtaaaagtgttctttctatt |
135 |
Q |
| |
|
||||||||||||||||| ||||||| |||| |||||||||||||| |
|
|
| T |
21534778 |
tctcccattctttcctattttcttaataaatgtgttctttctatt |
21534822 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 126
Target Start/End: Complemental strand, 10525324 - 10525257
Alignment:
| Q |
58 |
tattgtaaaggggaaacccttggaggagagattatctcccattctttcctatttcttagtaaaagtgtt |
126 |
Q |
| |
|
|||||| ||||||||||||||| |||||||||| |||| ||||| ||| |||||||| ||||| |||| |
|
|
| T |
10525324 |
tattgtgaaggggaaacccttg-aggagagattttctcgtattctatccaatttcttaataaaattgtt |
10525257 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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