View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10258_low_7 (Length: 374)

Name: NF10258_low_7
Description: NF10258
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10258_low_7
NF10258_low_7
[»] chr4 (49 HSPs)
chr4 (1-362)||(48645266-48645628)
chr4 (1-254)||(49524557-49524811)
chr4 (2-250)||(54387711-54387958)
chr4 (1-254)||(20493838-20494092)
chr4 (1-250)||(35401760-35402010)
chr4 (1-230)||(39345575-39345805)
chr4 (1-284)||(43507178-43507462)
chr4 (1-284)||(320694-320978)
chr4 (1-284)||(33265804-33266088)
chr4 (1-284)||(43508447-43508731)
chr4 (1-250)||(51013714-51013964)
chr4 (1-284)||(43520903-43521187)
chr4 (1-284)||(4173534-4173818)
chr4 (1-284)||(33264393-33264678)
chr4 (1-284)||(319284-319568)
chr4 (1-216)||(11254130-11254345)
chr4 (11-217)||(42982313-42982520)
chr4 (11-283)||(5439442-5439715)
chr4 (11-283)||(833244-833517)
chr4 (11-283)||(834837-835110)
chr4 (74-283)||(5437895-5438105)
chr4 (1-171)||(4169697-4169867)
chr4 (10-171)||(2691393-2691554)
chr4 (209-308)||(11641860-11641959)
chr4 (5-167)||(20820000-20820156)
chr4 (232-310)||(54387686-54387763)
chr4 (1-70)||(41761790-41761859)
chr4 (312-362)||(833804-833854)
chr4 (312-362)||(5439105-5439155)
chr4 (188-284)||(4172311-4172407)
chr4 (2-66)||(7149551-7149615)
chr4 (76-140)||(41759492-41759556)
chr4 (191-250)||(11641884-11641943)
chr4 (312-362)||(42981972-42982022)
chr4 (312-362)||(51013354-51013404)
chr4 (11-70)||(48646791-48646850)
chr4 (225-284)||(49524561-49524620)
chr4 (312-362)||(11254628-11254678)
chr4 (312-362)||(41760297-41760347)
chr4 (312-362)||(54387371-54387421)
chr4 (1-70)||(49523135-49523204)
chr4 (1-70)||(51011937-51012006)
chr4 (12-96)||(2693271-2693354)
chr4 (1-69)||(48813798-48813866)
chr4 (225-284)||(20494029-20494088)
chr4 (11-70)||(52868193-52868252)
chr4 (188-217)||(2691606-2691635)
chr4 (1-70)||(43519435-43519504)
chr4 (11-67)||(35404492-35404548)
[»] chr6 (42 HSPs)
chr6 (1-362)||(10569635-10569997)
chr6 (1-308)||(21068636-21068944)
chr6 (1-249)||(6902727-6902975)
chr6 (34-308)||(21045354-21045629)
chr6 (1-262)||(9399851-9400113)
chr6 (12-250)||(7051073-7051312)
chr6 (1-284)||(32518291-32518575)
chr6 (1-250)||(11357024-11357272)
chr6 (53-250)||(21091157-21091355)
chr6 (1-254)||(20525158-20525412)
chr6 (7-216)||(33267078-33267288)
chr6 (1-284)||(18644898-18645181)
chr6 (2-250)||(13610702-13610941)
chr6 (225-362)||(7050995-7051132)
chr6 (11-284)||(32454269-32454542)
chr6 (11-284)||(3480452-3480725)
chr6 (5-220)||(7371190-7371406)
chr6 (74-284)||(32437211-32437422)
chr6 (5-250)||(33276816-33277053)
chr6 (11-186)||(14337687-14337861)
chr6 (225-307)||(6902703-6902785)
chr6 (226-308)||(21091297-21091379)
chr6 (225-297)||(33276994-33277066)
chr6 (312-362)||(6902386-6902436)
chr6 (227-285)||(9399862-9399920)
chr6 (312-362)||(32454859-32454909)
chr6 (1-70)||(10568410-10568479)
chr6 (312-360)||(18644650-18644698)
chr6 (312-362)||(7371681-7371731)
chr6 (312-362)||(32437729-32437779)
chr6 (312-362)||(33267595-33267645)
chr6 (1-70)||(6899496-6899565)
chr6 (312-353)||(11356631-11356672)
chr6 (1-70)||(20523377-20523446)
chr6 (1-53)||(8605351-8605403)
chr6 (312-362)||(9399545-9399595)
chr6 (5-63)||(14338526-14338584)
chr6 (312-362)||(20524804-20524854)
chr6 (225-285)||(11357023-11357083)
chr6 (12-70)||(32439135-32439193)
chr6 (2-70)||(13613626-13613694)
chr6 (188-216)||(14337898-14337926)
[»] chr3 (69 HSPs)
chr3 (1-353)||(48829367-48829722)
chr3 (1-310)||(51686162-51686472)
chr3 (1-308)||(610992-611300)
chr3 (34-310)||(46113873-46114150)
chr3 (1-250)||(42282301-42282551)
chr3 (1-250)||(17516801-17517051)
chr3 (2-250)||(23291582-23291830)
chr3 (1-284)||(2661702-2661986)
chr3 (1-250)||(2378811-2379061)
chr3 (1-254)||(54412371-54412625)
chr3 (46-250)||(21350433-21350638)
chr3 (1-284)||(53094067-53094351)
chr3 (1-250)||(30598348-30598598)
chr3 (1-250)||(44267992-44268242)
chr3 (1-284)||(3150263-3150547)
chr3 (1-284)||(38193304-38193588)
chr3 (1-284)||(46308818-46309102)
chr3 (1-284)||(46609160-46609444)
chr3 (1-250)||(41979180-41979430)
chr3 (1-284)||(46310230-46310514)
chr3 (1-284)||(46611097-46611381)
chr3 (1-284)||(53187753-53188037)
chr3 (12-250)||(7883350-7883589)
chr3 (1-250)||(35903836-35904086)
chr3 (1-250)||(54899902-54900152)
chr3 (36-284)||(53092669-53092918)
chr3 (1-230)||(27897162-27897391)
chr3 (46-230)||(43766895-43767080)
chr3 (1-284)||(44795684-44795968)
chr3 (1-284)||(38191906-38192178)
chr3 (74-283)||(28626495-28626705)
chr3 (225-308)||(42282277-42282360)
chr3 (1-70)||(27899145-27899214)
chr3 (312-362)||(41978820-41978870)
chr3 (312-362)||(42281969-42282019)
chr3 (1-79)||(51684621-51684699)
chr3 (312-362)||(51685847-51685897)
chr3 (312-362)||(53188347-53188397)
chr3 (1-70)||(2226216-2226285)
chr3 (1-70)||(21348734-21348803)
chr3 (1-70)||(23293234-23293303)
chr3 (1-70)||(53190823-53190892)
chr3 (225-285)||(17516800-17516860)
chr3 (5-178)||(24846447-24846620)
chr3 (312-362)||(7883896-7883946)
chr3 (312-362)||(27897762-27897812)
chr3 (312-362)||(35904396-35904446)
chr3 (1-70)||(54898448-54898517)
chr3 (1-79)||(2660223-2660301)
chr3 (312-362)||(21350091-21350141)
chr3 (312-362)||(23292141-23292191)
chr3 (84-158)||(23875760-23875834)
chr3 (1-70)||(2377040-2377109)
chr3 (232-285)||(30598546-30598599)
chr3 (1-70)||(46112498-46112567)
chr3 (214-254)||(2378764-2378804)
chr3 (225-285)||(23291771-23291831)
chr3 (1-69)||(43765148-43765216)
chr3 (11-70)||(35905776-35905835)
chr3 (312-362)||(2378410-2378460)
chr3 (312-362)||(43766518-43766568)
chr3 (312-362)||(44274915-44274965)
chr3 (312-353)||(24846052-24846093)
chr3 (312-353)||(30598907-30598947)
chr3 (1-70)||(30599982-30600051)
chr3 (1-70)||(42279518-42279587)
chr3 (312-353)||(46199125-46199166)
chr3 (225-285)||(2378810-2378870)
chr3 (225-285)||(21350432-21350492)
[»] chr2 (49 HSPs)
chr2 (1-353)||(19581425-19581778)
chr2 (2-254)||(19906694-19906947)
chr2 (1-254)||(16376747-16377001)
chr2 (2-250)||(39663166-39663413)
chr2 (34-250)||(39456608-39456825)
chr2 (47-250)||(42517614-42517818)
chr2 (1-254)||(6799231-6799486)
chr2 (1-254)||(34400325-34400573)
chr2 (1-284)||(16764406-16764689)
chr2 (11-282)||(24205619-24205891)
chr2 (1-250)||(40561706-40561956)
chr2 (5-186)||(37646371-37646552)
chr2 (1-284)||(14387360-14387644)
chr2 (11-284)||(2577275-2577548)
chr2 (48-254)||(17697933-17698140)
chr2 (11-283)||(37021981-37022253)
chr2 (5-189)||(31474969-31475154)
chr2 (74-208)||(6783448-6783583)
chr2 (10-186)||(161968-162144)
chr2 (1-96)||(14389122-14389217)
chr2 (312-362)||(6783935-6783985)
chr2 (5-79)||(37645502-37645576)
chr2 (312-353)||(24206180-24206221)
chr2 (1-70)||(40560234-40560303)
chr2 (225-285)||(42517759-42517819)
chr2 (225-284)||(16376938-16376997)
chr2 (312-362)||(2768310-2768360)
chr2 (312-362)||(17697603-17697653)
chr2 (312-362)||(37021614-37021664)
chr2 (316-362)||(40561346-40561392)
chr2 (1-70)||(2766945-2767014)
chr2 (1-70)||(16763087-16763156)
chr2 (312-353)||(34400880-34400921)
chr2 (312-362)||(39663712-39663762)
chr2 (312-362)||(42518127-42518177)
chr2 (192-249)||(6783592-6783649)
chr2 (1-70)||(17696217-17696286)
chr2 (1-70)||(39664812-39664881)
chr2 (225-285)||(39456607-39456667)
chr2 (315-362)||(6798902-6798949)
chr2 (225-284)||(17697937-17697996)
chr2 (225-284)||(19906884-19906943)
chr2 (1-79)||(19908301-19908380)
chr2 (225-284)||(34400510-34400569)
chr2 (252-298)||(31474893-31474939)
chr2 (188-217)||(161902-161931)
chr2 (188-217)||(31474906-31474935)
chr2 (244-297)||(37646293-37646346)
chr2 (1-70)||(44709809-44709878)
[»] chr8 (60 HSPs)
chr8 (1-250)||(26238737-26238987)
chr8 (2-285)||(41823902-41824186)
chr8 (1-254)||(42943250-42943504)
chr8 (75-308)||(3152042-3152276)
chr8 (1-250)||(22273719-22273969)
chr8 (1-249)||(5037893-5038139)
chr8 (1-250)||(13283823-13284073)
chr8 (1-284)||(27692631-27692915)
chr8 (1-250)||(43261967-43262215)
chr8 (1-284)||(29238981-29239265)
chr8 (1-284)||(33761080-33761364)
chr8 (1-250)||(38548659-38548909)
chr8 (1-284)||(35510613-35510897)
chr8 (2-250)||(8608249-8608499)
chr8 (2-250)||(13106816-13107065)
chr8 (1-284)||(601498-601782)
chr8 (1-250)||(33707217-33707467)
chr8 (46-250)||(41040776-41040982)
chr8 (1-284)||(29237162-29237446)
chr8 (1-284)||(33762511-33762791)
chr8 (1-284)||(35509225-35509509)
chr8 (1-216)||(13484556-13484771)
chr8 (11-283)||(15308056-15308329)
chr8 (11-283)||(15488425-15488698)
chr8 (34-188)||(17807063-17807217)
chr8 (75-283)||(27404295-27404504)
chr8 (12-147)||(15562446-15562580)
chr8 (225-310)||(26238928-26239013)
chr8 (191-310)||(41824126-41824245)
chr8 (5-186)||(29694210-29694391)
chr8 (5-70)||(26242378-26242443)
chr8 (2-109)||(9671989-9672096)
chr8 (1-70)||(41825708-41825777)
chr8 (1-70)||(8609851-8609920)
chr8 (1-70)||(34681075-34681144)
chr8 (312-362)||(13107375-13107425)
chr8 (312-362)||(13283463-13283513)
chr8 (312-362)||(15307719-15307769)
chr8 (312-362)||(15488088-15488138)
chr8 (312-362)||(26239280-26239330)
chr8 (312-362)||(27404791-27404841)
chr8 (312-362)||(29238621-29238671)
chr8 (312-362)||(38548299-38548349)
chr8 (188-250)||(41824157-41824219)
chr8 (1-70)||(13282489-13282558)
chr8 (312-350)||(8608809-8608847)
chr8 (312-362)||(22273369-22273419)
chr8 (1-70)||(7745176-7745245)
chr8 (225-288)||(41824092-41824155)
chr8 (312-362)||(41041282-41041332)
chr8 (312-362)||(41824510-41824560)
chr8 (312-362)||(42942896-42942946)
chr8 (225-285)||(41040922-41040983)
chr8 (225-285)||(43261966-43262026)
chr8 (1-79)||(5036456-5036534)
chr8 (312-362)||(40338370-40338420)
chr8 (188-217)||(15562646-15562675)
chr8 (1-70)||(27691165-27691234)
chr8 (312-348)||(29693813-29693849)
chr8 (232-284)||(38548659-38548711)
[»] chr1 (60 HSPs)
chr1 (1-310)||(52641899-52642209)
chr1 (1-250)||(2870904-2871154)
chr1 (1-284)||(37345756-37346040)
chr1 (1-250)||(3011866-3012116)
chr1 (1-249)||(31236830-31237079)
chr1 (1-254)||(50554174-50554428)
chr1 (1-250)||(51894578-51894828)
chr1 (1-250)||(33599229-33599479)
chr1 (1-272)||(25276753-25277025)
chr1 (1-284)||(26223598-26223882)
chr1 (1-284)||(8167953-8168236)
chr1 (74-249)||(45045004-45045180)
chr1 (1-284)||(8169362-8169646)
chr1 (1-284)||(27089073-27089357)
chr1 (1-250)||(4854421-4854671)
chr1 (1-250)||(34776580-34776830)
chr1 (1-254)||(37087960-37088214)
chr1 (1-250)||(46582021-46582271)
chr1 (11-284)||(47011477-47011750)
chr1 (74-284)||(1443976-1444186)
chr1 (11-284)||(9120060-9120333)
chr1 (81-250)||(6816928-6817106)
chr1 (36-171)||(23577682-23577817)
chr1 (1-70)||(25278997-25279066)
chr1 (1-162)||(3369441-3369602)
chr1 (312-362)||(1443626-1443676)
chr1 (312-362)||(4854968-4855018)
chr1 (312-362)||(9120650-9120700)
chr1 (312-362)||(34777139-34777189)
chr1 (312-362)||(47012050-47012100)
chr1 (312-362)||(52642474-52642524)
chr1 (1-70)||(2869590-2869659)
chr1 (192-284)||(25276979-25277071)
chr1 (1-72)||(25278865-25278936)
chr1 (188-250)||(25277009-25277071)
chr1 (316-362)||(26224196-26224242)
chr1 (312-362)||(27088713-27088763)
chr1 (312-362)||(33599790-33599840)
chr1 (1-70)||(3013520-3013589)
chr1 (225-285)||(51894769-51894829)
chr1 (312-362)||(3012425-3012475)
chr1 (312-362)||(15105820-15105870)
chr1 (1-79)||(25278403-25278481)
chr1 (312-362)||(31237389-31237439)
chr1 (312-362)||(37087606-37087656)
chr1 (1-79)||(37344353-37344431)
chr1 (312-362)||(50554750-50554800)
chr1 (159-283)||(20944885-20945010)
chr1 (1-70)||(31238539-31238608)
chr1 (1-70)||(50556141-50556210)
chr1 (225-285)||(3012057-3012117)
chr1 (225-284)||(37087964-37088023)
chr1 (225-284)||(50554365-50554424)
chr1 (225-283)||(31237021-31237079)
chr1 (1-70)||(4856010-4856079)
chr1 (1-70)||(27087294-27087363)
chr1 (1-70)||(34778182-34778251)
chr1 (1-70)||(51896196-51896265)
chr1 (1-70)||(52643659-52643728)
chr1 (278-310)||(15106133-15106165)
[»] chr7 (68 HSPs)
chr7 (1-262)||(47384305-47384567)
chr7 (1-250)||(24226592-24226842)
chr7 (1-250)||(13169511-13169761)
chr7 (1-250)||(39857656-39857906)
chr7 (1-250)||(35691438-35691688)
chr7 (1-250)||(37113952-37114202)
chr7 (1-250)||(6605225-6605475)
chr7 (1-171)||(46437118-46437288)
chr7 (1-284)||(35403413-35403697)
chr7 (74-284)||(29994961-29995172)
chr7 (1-250)||(34775009-34775259)
chr7 (1-284)||(35401980-35402264)
chr7 (1-216)||(48227803-48228019)
chr7 (5-250)||(22155686-22155921)
chr7 (5-250)||(22211601-22211836)
chr7 (2-157)||(38549559-38549714)
chr7 (15-250)||(37791679-37791915)
chr7 (46-220)||(45361134-45361309)
chr7 (108-250)||(38472378-38472521)
chr7 (11-284)||(20479514-20479787)
chr7 (5-185)||(13039536-13039716)
chr7 (1-207)||(27664441-27664648)
chr7 (1-230)||(77862-78092)
chr7 (1-254)||(23904594-23904861)
chr7 (198-310)||(38549714-38549826)
chr7 (1-70)||(37796225-37796294)
chr7 (11-171)||(48311641-48311801)
chr7 (312-362)||(77484-77534)
chr7 (312-362)||(20479147-20479197)
chr7 (312-362)||(38550092-38550142)
chr7 (188-250)||(46437834-46437896)
chr7 (225-285)||(22211600-22211660)
chr7 (225-285)||(38472462-38472522)
chr7 (225-285)||(47384496-47384556)
chr7 (226-285)||(6605224-6605283)
chr7 (312-363)||(35691997-35692048)
chr7 (12-70)||(13168142-13168200)
chr7 (1-79)||(39859264-39859342)
chr7 (312-362)||(45360763-45360813)
chr7 (312-362)||(46438206-46438256)
chr7 (5-70)||(24228453-24228518)
chr7 (312-353)||(34775610-34775651)
chr7 (189-250)||(38549739-38549800)
chr7 (1-70)||(47386253-47386322)
chr7 (312-353)||(48851118-48851159)
chr7 (225-285)||(22155685-22155745)
chr7 (225-285)||(24226783-24226843)
chr7 (225-285)||(35691629-35691689)
chr7 (225-297)||(37791856-37791928)
chr7 (312-362)||(37114500-37114550)
chr7 (312-353)||(24227118-24227159)
chr7 (1-70)||(46439542-46439611)
chr7 (2-70)||(30940469-30940537)
chr7 (225-285)||(34775200-34775260)
chr7 (225-285)||(37114143-37114203)
chr7 (225-285)||(39857847-39857907)
chr7 (312-362)||(6604867-6604916)
chr7 (312-362)||(22155327-22155377)
chr7 (312-362)||(22211242-22211292)
chr7 (1-79)||(38474178-38474256)
chr7 (13-79)||(45359359-45359425)
chr7 (312-362)||(47384854-47384904)
chr7 (188-217)||(13036358-13036387)
chr7 (1-70)||(27666109-27666178)
chr7 (1-70)||(34776959-34777028)
chr7 (312-353)||(38472822-38472863)
chr7 (1-69)||(37115571-37115639)
chr7 (225-285)||(46437837-46437897)
[»] chr5 (47 HSPs)
chr5 (1-223)||(8541126-8541349)
chr5 (34-254)||(28813589-28813810)
chr5 (1-250)||(12738564-12738814)
chr5 (1-250)||(12801387-12801637)
chr5 (1-250)||(30463911-30464161)
chr5 (1-254)||(28821915-28822168)
chr5 (1-284)||(17577729-17578013)
chr5 (12-250)||(32134253-32134497)
chr5 (1-250)||(7269274-7269524)
chr5 (1-250)||(34328651-34328905)
chr5 (1-284)||(21842786-21843070)
chr5 (11-284)||(40782006-40782279)
chr5 (1-207)||(2852897-2853104)
chr5 (11-284)||(29620159-29620432)
chr5 (5-188)||(41493859-41494042)
chr5 (74-249)||(42471632-42471808)
chr5 (34-171)||(27077375-27077512)
chr5 (188-250)||(2181524-2181586)
chr5 (312-362)||(7268923-7268973)
chr5 (1-70)||(8539686-8539755)
chr5 (161-284)||(24539933-24540057)
chr5 (1-68)||(36057659-36057726)
chr5 (312-362)||(21842429-21842479)
chr5 (312-362)||(40781656-40781706)
chr5 (312-362)||(42472130-42472180)
chr5 (1-70)||(17574329-17574398)
chr5 (225-285)||(30464102-30464162)
chr5 (312-362)||(17575362-17575412)
chr5 (312-362)||(17576082-17576132)
chr5 (312-362)||(17577393-17577443)
chr5 (312-362)||(29620749-29620799)
chr5 (1-70)||(7267854-7267923)
chr5 (1-70)||(43492142-43492211)
chr5 (312-362)||(2181198-2181248)
chr5 (312-353)||(8540780-8540821)
chr5 (312-353)||(30464512-30464553)
chr5 (1-70)||(34327646-34327715)
chr5 (225-285)||(2181523-2181583)
chr5 (225-285)||(12738563-12738623)
chr5 (225-285)||(12801386-12801446)
chr5 (91-159)||(19998360-19998430)
chr5 (225-284)||(28813593-28813652)
chr5 (312-351)||(32134806-32134845)
chr5 (312-362)||(18624015-18624065)
chr5 (312-362)||(34328300-34328350)
chr5 (1-70)||(18625052-18625121)
chr5 (312-353)||(41494404-41494445)
[»] scaffold0345 (3 HSPs)
scaffold0345 (1-250)||(1385-1633)
scaffold0345 (312-353)||(992-1033)
scaffold0345 (225-285)||(1384-1444)
[»] scaffold0004 (2 HSPs)
scaffold0004 (1-308)||(106681-106978)
scaffold0004 (312-362)||(107234-107284)
[»] scaffold0058 (2 HSPs)
scaffold0058 (103-284)||(7031-7213)
scaffold0058 (1-129)||(14293-14421)
[»] scaffold1712 (1 HSPs)
scaffold1712 (74-283)||(1066-1276)
[»] scaffold0081 (1 HSPs)
scaffold0081 (11-284)||(54053-54326)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-66)||(436276-436341)
[»] scaffold0001 (1 HSPs)
scaffold0001 (108-183)||(63617-63692)
[»] scaffold0564 (1 HSPs)
scaffold0564 (1-70)||(8273-8342)


Alignment Details
Target: chr4 (Bit Score: 275; Significance: 1e-154; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 1 - 362
Target Start/End: Original strand, 48645266 - 48645628
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||||||||||||  | ||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  48645266 caaattcgtccttgaattttcaaaaatcagtcaaattcgtccatgaattttgcgaaatatctatttagtcctcgaatttacaaaatgttcatcaaatcag 48645365  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagcatg-accaaattgat 199  Q
    |||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| | |||||||||||    
T  48645366 tacctccgttcaattggtctgttaacgaaggtgacgtgtattgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcagggaccaaattgat 48645465  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaaaatttccaacga 299  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||     
T  48645466 tgatttacagaaaattgtcaaggatcaaattgattgattttcagaaaattgccaaggaacaaattgattgattttcagaaaattgcaaaatttccaacgg 48645565  T
Q  300 ctctttctccttttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  48645566 ctctttctccttttcaagctctatgtacaatgatgatgtgagagagcttcaatgttggtgtcc 48645628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 49524811 - 49524557
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||   | ||||||||| | |||||||| ||||| ||||||||||   |||||||||||||||  ||||||||||    
T  49524811 caaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaatttacaaaatgtcaatcaaatcag 49524712  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | | ||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||| |||||||  ||||||||||||    
T  49524711 tccttccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttaccaggcttaccacgtcatatgtcacgcaagcagggaccaaattgat 49524612  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaa 254  Q
    ||||||||||||||||| |||||| |||||| || |||||| |||||||||||||    
T  49524611 tgatttacagaaaattgtcaaggaccaaattgatggattttgagaaaattgtcaa 49524557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 2 - 250
Target Start/End: Complemental strand, 54387958 - 54387711
Alignment:
Q  2 aaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagt 101  Q
    |||||||| ||| |||||| |||||||| || |||| || | ||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  54387958 aaattcgtccttaaatttttaaaaatcagccaaattagttcctaa-ttttgcgaaatatctatttagtcctcgaatttacaaaatgtccatcaaatcagt 54387860  T
Q  102 acctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgatt 200  Q
     | |||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||| ||| || |||||||  ||| ||| |||||    
T  54387859 tcatccgttaagttggtctgttaacggaggtga-gtgtaccgttaacctcttacaaggcttaccacgtcaaatgccacgcaagcagggactaaactgatt 54387761  T
Q  201 gatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  54387760 gatttacagaaaattgccaaggaccaaattgattgattttcagaaaattg 54387711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 20493838 - 20494092
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    |||||||||  ||||||||| ||| |||  || ||||||| ||| ||||||||||||||||||||||||    |||||||||||||||  ||||||||||    
T  20493838 caaattcgtcattgaattttaaaatatcggccaaattcgttcttgaattttgcgaaatatctatttagttcctgaatttacaaaatgtcaatcaaatcag 20493937  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | |||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||| ||| || |||||||  ||||||||||||    
T  20493938 tccctccgttaagttggtgtgttaacggaggtgacgtgtaacgttaacctcttacaaggcttaccacgtcagatgccacgcaagcagggaccaaattgat 20494037  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaa 254  Q
    ||||||||| ||||||| |||||| |||||| || ||||||||||||||||||||    
T  20494038 tgatttacataaaattggcaaggaccaaattgatggattttcagaaaattgtcaa 20494092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 35401760 - 35402010
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||  || ||||||||| | ||||||| ||||||||||||||||| | |||||||||||||||  ||||||||||    
T  35401760 caaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgtgaaatatctatttagtccttgaatttacaaaatgtcaatcaaatcag 35401859  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||||||||||| ||||||||||||||||||||||||||  |||||||||||||||  |||||||||||| ||| || |||||||  ||||||||||||    
T  35401860 tccctccgttaagctggtctgttaacggaggtgacgtgtaacgttaacctcttacaaaccttaccacgtcagatgccacgcaagcagggaccaaattgat 35401959  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    |||||||||||||||||||||| | |||||| || |||||||| |||||||    
T  35401960 tgatttacagaaaattgccaagcaccaaattgatggattttcataaaattg 35402010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 39345575 - 39345805
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||  || ||||||||| | |||||||||||||| ||||||||||   |||||||||||||||  ||||||||||    
T  39345575 caaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatagctatttagtccctgaatttacaaaatgtcaatcaaatcag 39345674  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    |  ||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||| | | ||| ||  ||||||  ||||||||||||    
T  39345675 tctctccgttaagttggtatgttaacggaggtgacgtgtaacgttaacctcttacaaggcttaccacataagatgccacacaagcagggaccaaattgat 39345774  T
Q  200 tgatttacagaaaattgccaaggatcaaatt 230  Q
    |||||||||||||||||||||||||||||||    
T  39345775 tgatttacagaaaattgccaaggatcaaatt 39345805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 43507178 - 43507462
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||  || | ||||||| | |||||||||||||||| | ||||||   |||||||||||||||  ||||||||||    
T  43507178 caaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcag 43507277  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||||||||||||||| |||||||||||||||||||||   |||||||||| |||| ||||||||||||| |||||| |||||||  ||||||| ||||    
T  43507278 tccctccgttaagttggactgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgtcacgcaagcagggaccaaactgat 43507377  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  43507378 tgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 43507462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 320978 - 320694
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||  || | ||| ||||| |||||||||||||||| | |||||| | ||| |||||||||||  ||||| ||||    
T  320978 caaattcgtccttgaattttgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtccttgaaattacaaaatgtcaatcaactcag 320879  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||||||||||||||| |||||||||||||||||||||   |||||||||| |||| ||||||||||||| ||| || |||||||  ||||||| ||||    
T  320878 tccctccgttaagttggcctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgat 320779  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  320778 tgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 320694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 33266088 - 33265804
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    |||||||||||||||||||| |||||||  |  | ||||| | | |||||||||||||||| | ||||||   |||||||||||||||  ||||||||||    
T  33266088 caaattcgttcttgaattttgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcag 33265989  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||||||||||||| |||||||||||||||||||||||   |||||||||| |||| ||||||||||||| ||| || |||||||  ||||||| ||||    
T  33265988 tccctccgttaagttagtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgat 33265889  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  33265888 tgatttacataaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 33265804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 43508731 - 43508447
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||  || | ||||||| | |||||||||||||||| | ||||||   |||||||||||||||  ||||||||||    
T  43508731 caaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcag 43508632  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||||||||||||||| ||||||||| |||||||||||   |||||||||| |||| ||||||||||||| ||| || |||||||  ||||||| ||||    
T  43508631 tccctccgttaagttggcctgttaacgaaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgat 43508532  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  43508531 tgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 43508447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 51013964 - 51013714
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||   | | ||||||| | |||||||| ||||||| | | ||||   |||||||||||||||  ||||||||||    
T  51013964 caaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaatgagtccctgaatttacaaaatgtcaatcaaatcag 51013865  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||||||||||||| ||| || |||||||  ||||||| ||||    
T  51013864 tccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgat 51013765  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    | ||||||| |||||| ||||||| |||||| || |||||| |||||||||    
T  51013764 taatttacacaaaatttccaaggaccaaattgatggatttttagaaaattg 51013714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 43521187 - 43520903
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    |||||| ||||||||||||| ||||||||  | | |||||  || |||||||||||||||| | ||||||   |||||||||||||||  ||||||||||    
T  43521187 caaatttgttcttgaattttgaaaaatcagtcaatttcgtttttgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcag 43521088  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | | |||||||||||| |||||||||| |||||||||||   |||||||||| |||| ||||||||||||| ||| || |||||||  ||||||| ||||    
T  43521087 ttcttccgttaagttgttctgttaacgtaggtgacgtgttacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgat 43520988  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||||||| ||||||  |||||| |||||| || ||||| || ||||||  |||||| ||||||||| |||| ||| |||||||    
T  43520987 tgatttacacaaaattttcaaggaccaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcataaaattg 43520903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 4173818 - 4173534
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||  || | ||||||| | |||||||||||||||| | ||||||   |||||||||||| ||  ||||| ||||    
T  4173818 caaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaacgtcaatcaactcag 4173719  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||||||||||||||| |||||||||||||||||||||   |||||| ||| |||| ||||||||||||| ||| || |||||||  ||||||| ||||    
T  4173718 tccctccgttaagttggcctgttaacggaggtgacgtgtcacgttaacatctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgat 4173619  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| | |||||||||    
T  4173618 tgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggatttttagaaaattg 4173534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 33264393 - 33264678
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||   | | ||||||| | |||||||| ||||||| | |||||    |||||||||||||||  ||||||||||    
T  33264393 caaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaattagttcctgaatttacaaaatgtcaatcaaatcag 33264492  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagcat-gaccaaattgat 199  Q
    | |||||||||||||||||||||||||||||||||||||   |||||||||| |||| ||||||||||||| ||| || | |||||| ||||||| ||||    
T  33264493 tccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgtaagcatggaccaaactgat 33264592  T
Q  200 tgatttacagaaaa-ttgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||||||  |||| || | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  33264593 tgatttacgcaaaattttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 33264678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 319284 - 319568
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||   | | ||||||| | |||||||||||||||| | |||||    |||||||||||||||  |||||| |||    
T  319284 caaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaatttacaaaatgtcaatcaaaccag 319383  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | |||||||||||||||||||||||| ||||||||||||   |||||||||| ||||  |||||||||||| |||||| |||||||  ||||||| ||||    
T  319384 tccctccgttaagttggtctgttaacagaggtgacgtgtcacgttaacctctgacaaaacttaccacgtcagatgtcacgcaagcagggaccaaactgat 319483  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||||||| |||||| | |||||  ||||| ||  |||| || ||||||  |||||| |||||||||  ||| |||||||||||    
T  319484 tgatttacacaaaatttcgaaggacgaaattgatgtatttacacaaaatttccaaggaccaaattgatgaattttcagaaaattg 319568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 11254130 - 11254345
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||  || ||| ||||  |||||||||||||||| || ||| ||| | |||||||||||||||  ||||||||||    
T  11254130 caaattcgtccttgaatttttaaaaatcggccaaatccgtctctaaattttgcgaaatagctcttttgtccttgaatttacaaaatgtcaatcaaatcag 11254229  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | |||||||||||||||| ||||||||||||||| |||||  ||| | ||||||||||||||||||||||| ||| ||||||||||  ||||||||||||    
T  11254230 tccctccgttaagttggtttgttaacggaggtgatgtgtaacgtt-atctcttacaaggcttaccacgtcagatgccatgcaagcagggaccaaattgat 11254328  T
Q  200 tgatttacagaaaattg 216  Q
     ||||| || |||||||    
T  11254329 ggattttcataaaattg 11254345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 11 - 217
Target Start/End: Complemental strand, 42982520 - 42982313
Alignment:
Q  11 cttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgtt 110  Q
    |||||||||| |||||||   | ||||||||| | ||||||||||||||  ||||| ||| | |||||||||||||||  ||||||||||| ||||||||    
T  42982520 cttgaatttttaaaaatctgtcaaattcgtccctgaattttgcgaaatagttattttgtccttgaatttacaaaatgtcaatcaaatcagtccctccgtt 42982421  T
Q  111 aagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattgatttacag 209  Q
    |||||||| |||||||||||||||||||||  ||| |||| ||||||| |||||||||||| ||| ||  ||||||  ||||||||||||||||||| ||    
T  42982420 aagttggtgtgttaacggaggtgacgtgtaacgttgaccttttacaagccttaccacgtcagatgccacacaagcagggaccaaattgattgatttagag 42982321  T
Q  210 aaaattgc 217  Q
    ||||||||    
T  42982320 aaaattgc 42982313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 11 - 283
Target Start/End: Complemental strand, 5439715 - 5439442
Alignment:
Q  11 cttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgtt 110  Q
    |||||||||| |||||||  || | ||||||| | |||| | ||||||||| |  |||||   |||||||||||||||  ||||||| ||| ||||||||    
T  5439715 cttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtcaatcaaattagtccctccgtt 5439616  T
Q  111 aagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattgatttacag 209  Q
    || ||||||||||||||||||||||||||   |||||||||| |||| || |||||||||| ||| || |||||||  |||||||||||| ||||||||     
T  5439615 aaattggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcgtaccacgtcagatgccacgcaagcagggaccaaattgatggatttacac 5439516  T
Q  210 aaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaatt 283  Q
    |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| ||||||||||    
T  5439515 aaaatttcgaaggactaaattgatggatttacacaaaatttccaaggatcaaattgatggattttcagaaaatt 5439442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 11 - 283
Target Start/End: Original strand, 833244 - 833517
Alignment:
Q  11 cttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgtt 110  Q
    |||||||||| |||||||  || | ||||||| | |||| | ||||||||| |  |||||   |||||||||||||||  ||||||| ||| ||||||||    
T  833244 cttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtcaatcaaattagtccctccgtt 833343  T
Q  111 aagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattgatttacag 209  Q
    || ||||||||||||||||||||||||||   |||||||||| |||| || |||||||||| ||| || |||||||  ||||||||||||  |||||||     
T  833344 aaattggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcgtaccacgtcagatgccacgcaagcagggaccaaattgatgaatttacac 833443  T
Q  210 aaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaatt 283  Q
    |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| ||||||||||    
T  833444 aaaatttcgaaggactaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaatt 833517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 11 - 283
Target Start/End: Complemental strand, 835110 - 834837
Alignment:
Q  11 cttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgtt 110  Q
    |||||||||| ||||||| ||| | || |||| | |||| | ||||||||| |  |||||   |||||||||||| ||  ||||||| ||| ||||||||    
T  835110 cttgaattttgaaaaatcgaccaattttgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaacgtcaatcaaattagtccctccgtt 835011  T
Q  111 aagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattgatttacag 209  Q
    || ||||||||||||||||||||||||||   |||||||||| |||| || |||||||||| ||| || |||||||  |||||||||||| ||||||||     
T  835010 aaattggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcgtaccacgtcagatgccacgcaagcagggaccaaattgatggatttacac 834911  T
Q  210 aaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaatt 283  Q
    |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| ||||||||||    
T  834910 aaaatttcgaaggactaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaatt 834837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 74 - 283
Target Start/End: Original strand, 5437895 - 5438105
Alignment:
Q  74 gaatttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcata 173  Q
    |||||||||||||||  ||||||| ||| |||||||||| ||||||||||||||||||||||||||   |||||||||| |||| || || ||||||| |    
T  5437895 gaatttacaaaatgtcaatcaaattagtccctccgttaaattggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcgtaacacgtcaga 5437994  T
Q  174 tgtcatgcaagca-tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgatt 272  Q
    || || |||||||  |||||||||||| |||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| ||||    
T  5437995 tgccacgcaagcagggaccaaattgatggatttacacaaaatttcgaaggactaaattgatggatttacacaaaatttccaaggaccaaattgatggatt 5438094  T
Q  273 atcagaaaatt 283  Q
     ||||||||||    
T  5438095 ttcagaaaatt 5438105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 4169697 - 4169867
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| ||||||  | | | ||||||  | |||||||||||||||| | ||||||   |||||||||||||||  |||||| |||    
T  4169697 caaattcgtccttgaattttgaaaaattgatcaatttcgtctctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaaccag 4169796  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtca 171  Q
    | ||||||||||||||||||||||| |||||||||||||   |||||||||| |||| |||||||||||||    
T  4169797 tccctccgttaagttggtctgttaatggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtca 4169867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 10 - 171
Target Start/End: Original strand, 2691393 - 2691554
Alignment:
Q  10 tcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgt 109  Q
    |||||||||||||||||||| || |||||||||  ||||||||| ||||||||||||||||   ||||||  |||||||  |||||||||||   |||||    
T  2691393 tcttgaattttcaaaaatcagccaaattcgtccacaaattttgcaaaatatctatttagtccctgaatttttaaaatgtcaatcaaatcagtcaatccgt 2691492  T
Q  110 taagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtca 171  Q
    |||||||| ||||||| |||||||| ||| || ||||| | |||||||| ||||||||||||    
T  2691493 taagttggcctgttaagggaggtgatgtgcatcgttaatcgcttacaagacttaccacgtca 2691554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 209 - 308
Target Start/End: Complemental strand, 11641959 - 11641860
Alignment:
Q  209 gaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaaaatttccaacgactctttctc 308  Q
    |||||||  ||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||  ||| |||||||||||||||||||| |||||||||    
T  11641959 gaaaattatcaaggatcaaattgattgatttacagaaaattgtcaaggaccaaattgattgatttacaggaaattgcaaaatttccaacgtctctttctc 11641860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 5 - 167
Target Start/End: Original strand, 20820000 - 20820156
Alignment:
Q  5 ttcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacc 104  Q
    ||||| |||||||||||||||||||  | ||||  | | |||||||||| |||||| |||||||||   |||||| ||||||||  ||||||||||| |     
T  20820000 ttcgtccttgaattttcaaaaatcagtcaaatttattcctaaattttgcaaaatatttatttagtccctgaattttcaaaatgtcaatcaaatcagttca 20820099  T
Q  105 tccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccac 167  Q
    ||||||||||||| |||||||| ||||||||||      |||||| |||||||||||||||||    
T  20820100 tccgttaagttggcctgttaacagaggtgacgt------ttaaccgcttacaaggcttaccac 20820156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 232 - 310
Target Start/End: Complemental strand, 54387763 - 54387686
Alignment:
Q  232 attgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaaaatttccaacgactctttctcct 310  Q
    |||||||| |||||||||| |||||| |||||||||||||| |||||||||||||||| |||| |||||||||||||||    
T  54387763 attgatttacagaaaattgccaaggaccaaattgattgattttcagaaaattgcaaaa-ttcccacgactctttctcct 54387686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 41761859 - 41761790
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||||| ||||||||||||||||||  || |||||||||  ||||||||||||||||||||||||||    
T  41761859 caaattcgtccttgaattttcaaaaatcggccaaattcgtcccgaaattttgcgaaatatctatttagtc 41761790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 833804 - 833854
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||    
T  833804 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgttggtgtcc 833854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 5439155 - 5439105
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||    
T  5439155 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgttggtgtcc 5439105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 188 - 284
Target Start/End: Original strand, 4172311 - 4172407
Alignment:
Q  188 gaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||||| ||||||||||||| |||||| | |||||  ||||| || ||||| || |||||| ||||||| ||||||||| |||| |||||||||||    
T  4172311 gaccaaactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaattttcaaggaccaaattgatggattttcagaaaattg 4172407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 7149551 - 7149615
Alignment:
Q  2 aaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctattt 66  Q
    |||||| | ||||||||||||||||||| |||||||| || |||||||||||||||||| |||||    
T  7149551 aaattcatccttgaattttcaaaaatcagccgaattcatctttaaattttgcgaaatatttattt 7149615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 41759492 - 41759556
Alignment:
Q  76 atttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgta 140  Q
    |||||||||||||  |||||||||||  ||||||||||||||||||| ||| |||||||||||||    
T  41759492 atttacaaaatgtcaatcaaatcagtcactccgttaagttggtctgtcaacagaggtgacgtgta 41759556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 250
Target Start/End: Complemental strand, 11641943 - 11641884
Alignment:
Q  191 caaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    |||||||||||||||||||||||||| |||||| |||||| |||||||| ||| ||||||    
T  11641943 caaattgattgatttacagaaaattgtcaaggaccaaattgattgatttacaggaaattg 11641884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 42982022 - 42981972
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||| ||||||||||||||||| || |||||    
T  42982022 ttcaagctctatgtacaatgatgaggtgagagagcttcaatgttggtgtcc 42981972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 51013404 - 51013354
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    ||||||||||||||||||||||||||| |||||||||||||| || |||||    
T  51013404 ttcaagctctatgtacaatgatgatgtaagagagcttcaatgttggtgtcc 51013354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 48646850 - 48646791
Alignment:
Q  11 cttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||||||||||| ||| |  ||||||||||| ||||| |||||||||||||||||||    
T  48646850 cttgaattttcaaaagtcagctaaattcgtccttgaatttagcgaaatatctatttagtc 48646791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 284
Target Start/End: Complemental strand, 49524620 - 49524561
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    |||||| |||||||| ||||||||||||||||| ||||||||| |||| | |||||||||    
T  49524620 caaattgattgatttacagaaaattgtcaaggaccaaattgatggattttgagaaaattg 49524561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 11254628 - 11254678
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||| ||||||||||||||||||| ||||||||||||||||| || |||||    
T  11254628 ttcaggctctatgtacaatgatgaggtgagagagcttcaatgttggtgtcc 11254678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 41760297 - 41760347
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    ||||| |||||||||||||||||| ||||||||||||||||| || |||||    
T  41760297 ttcaacctctatgtacaatgatgaggtgagagagcttcaatgttggtgtcc 41760347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 54387421 - 54387371
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    ||||||||||||||| ||| |||||||||||||||||||||| || |||||    
T  54387421 ttcaagctctatgtataataatgatgtgagagagcttcaatgttggtgtcc 54387371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 49523135 - 49523204
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    |||||||||  ||||||||| |||||||  |  ||||||||| | |||||||||||||||||||||||||    
T  49523135 caaattcgtcattgaattttaaaaaatcggctaaattcgtccatgaattttgcgaaatatctatttagtc 49523204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 51011937 - 51012006
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||||| |||||||||| |||||||   | ||||| | ||| |||||||||||||||||||||||||    
T  51011937 caaattcgtccttgaattttaaaaaatcggtcaaattctttcttgaattttgcgaaatatctatttagtc 51012006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 2693354 - 2693271
Alignment:
Q  12 ttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaa 96  Q
    ||||||||| |||||||| || ||||  | | ||||||||||||||||||||||||||| | ||||||  ||||||| |||||||    
T  2693354 ttgaattttaaaaaatcagccaaatttattcctaaattttgcgaaatatctatttagtctttgaattt-taaaatgtccatcaaa 2693271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 48813798 - 48813866
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagt 69  Q
    ||||||||| ||||||||||||||||||| || ||||  ||| | |||||||| |||||| ||||||||    
T  48813798 caaattcgtccttgaattttcaaaaatcagccaaatttatccctgaattttgcaaaatatatatttagt 48813866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 284
Target Start/End: Original strand, 20494029 - 20494088
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    |||||| |||||||| || ||||||| |||||| ||||||||| |||| |||||||||||    
T  20494029 caaattgattgatttacataaaattggcaaggaccaaattgatggattttcagaaaattg 20494088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 52868252 - 52868193
Alignment:
Q  11 cttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    |||||||||| |||||||   | ||||||||  |||||||||||||||||||||||||||    
T  52868252 cttgaattttaaaaaatcggtcaaattcgtctataaattttgcgaaatatctatttagtc 52868193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 217
Target Start/End: Original strand, 2691606 - 2691635
Alignment:
Q  188 gaccaaattgattgatttacagaaaattgc 217  Q
    ||||||||||||||||||||||||||||||    
T  2691606 gaccaaattgattgatttacagaaaattgc 2691635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 43519435 - 43519504
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||||| |||||||||| |||||||  || | ||||||| | |||||||||||||||| | ||||||    
T  43519435 caaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtc 43519504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 35404548 - 35404492
Alignment:
Q  11 cttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctattta 67  Q
    |||||||||| |||||||  |  ||||||||||| ||||||||||||||| ||||||    
T  35404548 cttgaattttaaaaaatcggctaaattcgtccttcaattttgcgaaatatttattta 35404492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 227; Significance: 1e-125; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 362
Target Start/End: Complemental strand, 10569997 - 10569635
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||| || ||||||||| | |||||||| |||||||||||||||| ||||||||||||||||| |||||||||||    
T  10569997 caaattcgtccttgaattttaaaaaatcagccaaattcgtccatgaattttgcaaaatatctatttagtcctcgaatttacaaaatgtccatcaaatcag 10569898  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagcatg-accaaattgat 199  Q
    | ||||||| || ||||||||||||||||||||||||||| ||||||||||||||  ||||||||| |||| ||| || ||||||| | | |||||||||    
T  10569897 tccctccgtcaaattggtctgttaacggaggtgacgtgtactgttaacctcttacgtggcttaccatgtcagatgccacgcaagcagggatcaaattgat 10569798  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaaaatttccaacga 299  Q
    ||||||||||||||||||||| || |||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||| |||||||    
T  10569797 tgatttacagaaaattgccaaagaccaaattgattgattttcagaaaattgccaaggaacaaattgattgattttcagaaaattgtaaaattcccaacga 10569698  T
Q  300 ctctttctccttttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||| || |||||    
T  10569697 ctctttctcctcttcaagctctatgtacaatgatgatgtgagcgagcttcaatgttggtgtcc 10569635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 21068636 - 21068944
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| ||||||||||||| |||||  | |||||||||  ||||||| |||||||||||||||||| |||||||||||||||||  ||||||||||    
T  21068636 caaattcgtccttgaattttcaacaatcagtcaaattcgtccacaaattttacgaaatatctatttagtcctcgaatttacaaaatgtcaatcaaatcag 21068735  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagc-atgaccaaattgat 199  Q
    | ||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||| || ||| |||||| | ||||||||||||    
T  21068736 tccctccgttaagttggcctgttaacggaggtgacgtgtactgttaatctcttacaaggcttaccacgtcagatatcacgcaagcaaggaccaaattgat 21068835  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaaaatttccaacga 299  Q
    ||||||| |||||||||||||||| |||||| |||||||||||||||||||||||| | |||||||||||||| ||| ||||||| ||||||||||||||    
T  21068836 tgatttatagaaaattgccaaggaccaaattgattgattttcagaaaattgtcaagaatcaaattgattgattttcacaaaattgaaaaatttccaacga 21068935  T
Q  300 ctctttctc 308  Q
    |||||||||    
T  21068936 ctctttctc 21068944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 6902975 - 6902727
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||||||||||||  | ||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||    
T  6902975 caaattcgtccttgaattttcaaaaatcagtcaaattcgtccctaaattttgcgaa-tatctatttagtcctcgaatttacaaaatgtccatcaaatcag 6902877  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||| |||||| |||||||  ||||||||||||    
T  6902876 tccctccgttaagttggtctgttaacggaggtgacgtgtaccgttaacctcttacaagacttaccacgtcagatgtcacgcaagcagagaccaaattgat 6902777  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaatt 249  Q
    ||||||||||||||||| ||||||  ||||| ||||||||||||||||||    
T  6902776 tgatttacagaaaattgtcaaggactaaattgattgattttcagaaaatt 6902727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 34 - 308
Target Start/End: Original strand, 21045354 - 21045629
Alignment:
Q  34 aattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtg 133  Q
    |||||||||  ||||||| ||||||||||||||||||  ||||||||||||||||  ||||||||||| | ||||||||||| | ||| ||| |||||||    
T  21045354 aattcgtccacaaattttacgaaatatctatttagtccccgaatttacaaaatgtcaatcaaatcagtccatccgttaagttagcctggtaatggaggtg 21045453  T
Q  134 acgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattgatttacagaaaattgccaaggatcaaattaa 232  Q
    ||||||| |||||| ||||||||||||||||||||||| || ||| |||||||  |||||||||||||||||||   ||||||| |||||| |||||| |    
T  21045454 acgtgtactgttaatctcttacaaggcttaccacgtcagatatcacgcaagcagggaccaaattgattgatttattaaaaattgtcaaggaccaaattga 21045553  T
Q  233 ttgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaaaatttccaacgactctttctc 308  Q
    ||||||||||||||||||||||| | |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  21045554 ttgattttcagaaaattgtcaagaatcaaattgattgattttcataaaattgcaaaatttccaacgactctttctc 21045629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 9400113 - 9399851
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| ||||||||  | ||||| ||||| |||||||||||||||||| ||||||  |||||||||||||| |  ||||||||||    
T  9400113 caaattcgtccttgaattttgaaaaatcagtcaaattcatccttgaattttgcgaaatatctaattagtccccgaatttacaaaatatcaatcaaatcag 9400014  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    |  ||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||| | ||| || |||||||  |||| |||||||    
T  9400013 tctctccgttaagttggtctgttaacagaggtgacgtgtaacgttaacctcttacaaggcttaccacgttagatgccacgcaagcagggacctaattgat 9399914  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaa 262  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||| ||||    
T  9399913 tgatttacagaaaattgtcaaggatcaaattgattgattttcagaaaattgccaaggaccaaa 9399851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 12 - 250
Target Start/End: Complemental strand, 7051312 - 7051073
Alignment:
Q  12 ttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgtta 111  Q
    ||||||||| ||||||||  | ||||||||  | ||||||||||||||||||||||||  ||||||||| ||||| | ||  |||| ||| ||||| |||    
T  7051312 ttgaattttaaaaaatcagtcaaattcgtctctgaattttgcgaaatatctatttagtactcgaatttataaaatatccactaaattagtccctccatta 7051213  T
Q  112 agttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattgatttacaga 210  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||  |||||||||||||||||||||||    
T  7051212 agttggtctgttaacggaggtgacgtgtactgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcagggaccaaattgattgatttacaga 7051113  T
Q  211 aaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    ||||||||||||| |||||| |||||||||||||||||||    
T  7051112 aaattgccaaggaacaaattgattgattttcagaaaattg 7051073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 32518575 - 32518291
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||  || | ||| ||| | |||||||||||||||| | ||||||   |||||||||||||||  ||||||||||    
T  32518575 caaattcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcag 32518476  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | |||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||| ||| || |||||||  ||||||| ||||    
T  32518475 tccctccgttaagttggtctgttaacggaggtgacgtgtaatgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgat 32518376  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||||||| |||||| ||||||| |||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  32518375 tgatttacacaaaatttccaaggaccaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 32518291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 11357272 - 11357024
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||   | ||||||||| | |||||||  ||||| | ||||||||   |||||||||||||||   |||||||||    
T  11357272 caaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgaaaaatagcaatttagtccctgaatttacaaaatgtcattcaaatcag 11357173  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | |||||||||||||||||||||||||||  |||||||||  ||||||||||||||||||||||||||||| |||||| |||||||  ||||||||||||    
T  11357172 tccctccgttaagttggtctgttaacgga--tgacgtgtaacgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcagagaccaaattgat 11357075  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    |||||||||||||||||||||||| |||||| || || |||||||||||||    
T  11357074 tgatttacagaaaattgccaaggaccaaattgatggaatttcagaaaattg 11357024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 21091157 - 21091355
Alignment:
Q  53 cgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctct 152  Q
    ||||||||||||||||||  |||||||| |||||||  ||||||||||| ||||| ||||||||| |||||||||||||||||||||| |||||| ||||    
T  21091157 cgaaatatctatttagtccccgaatttataaaatgtcaatcaaatcagtccctccattaagttggcctgttaacggaggtgacgtgtactgttaatctct 21091256  T
Q  153 tacaaggcttaccacgtcatatgtcatgcaagcat-gaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    ||||||||||||||||||| |||||| |||||||| ||| ||||||||||||||| ||||||||| |||||| |||||| ||||||||||| |||||||    
T  21091257 tacaaggcttaccacgtcagatgtcacgcaagcatggactaaattgattgatttatagaaaattgtcaaggaccaaattgattgattttcataaaattg 21091355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 20525412 - 20525158
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    |||||||||  ||||||||| ||||||    | ||||| ||| | |||||||| ||||| |||||| ||| | |||||||||||||||  ||||||||||    
T  20525412 caaattcgtctttgaatttttaaaaataggtcaaattcatccctgaattttgcaaaatagctattttgtccttgaatttacaaaatgtcaatcaaatcag 20525313  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||||||||||||||||||||||||||||||||| || |  ||||||||||||||||||||||||||||| ||| ||  ||||||  ||||||||||||    
T  20525312 tccctccgttaagttggtctgttaacggaggtgacatgcaacgttaacctcttacaaggcttaccacgtcagatgccacacaagcagggaccaaattgat 20525213  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaa 254  Q
    |||||||||||| |||||||| || |||||| || ||||||||||||||||||||    
T  20525212 tgatttacagaacattgccaatgaccaaattgatggattttcagaaaattgtcaa 20525158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 7 - 216
Target Start/End: Original strand, 33267078 - 33267288
Alignment:
Q  7 cgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctc 106  Q
    |||||||| ||||| |||||| || | ||||||| || |||||||||||||||||||||||||   |||||||| |||||||  ||||||||||| | ||    
T  33267078 cgttcttgtatttttaaaaattaatcaaattcgttctcaaattttgcgaaatatctatttagttcccgaatttataaaatgtcaatcaaatcagtccttc 33267177  T
Q  107 cgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattgattt 205  Q
    |||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| || |||||||  ||||||||||||||||||    
T  33267178 cgttaaattggcctgttaacggaggtgacgtgtagtgttaacctcttacaaggcttaccacgtcagatgccacgcaagcagggaccaaattgattgattt 33267277  T
Q  206 acagaaaattg 216  Q
    ||| |||||||    
T  33267278 acacaaaattg 33267288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 18645181 - 18644898
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||   | ||||||||  | |||||||||||||||| | ||||||   |||||||||||||||  ||||||||||    
T  18645181 caaattcgtccttgaattttgaaaaatcggac-aattcgtctctgaattttgcgaaatatcaaattagtccatgaatttacaaaatgtcaatcaaatcag 18645083  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||||||||||||||||||||||||||||||||| ||||  |||||||||| ||||  |||||||||| | |||||| |||||||  ||||||| ||||    
T  18645082 tccctccgttaagttggtctgttaacggaggtgacatgtaacgttaacctctgacaaaacttaccacgttagatgtcacgcaagcagggaccaaactgat 18644983  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
     |||||||| |||||| ||||||| |||||| || ||||| || ||||||  |||||| ||||||||| |||| ||| |||||||    
T  18644982 cgatttacacaaaatttccaaggaccaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcataaaattg 18644898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 2 - 250
Target Start/End: Original strand, 13610702 - 13610941
Alignment:
Q  2 aaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc-atcgaatttacaaaatgttcatcaaatcag 100  Q
    |||||||| |||||||||| ||||||| | | |||| |||| | |||||||||||||||| | |||||| ||  ||||||||||||||  ||||||||||    
T  13610702 aaattcgtccttgaattttgaaaaatcgatcaaatttgtccctgaattttgcgaaatatcaaattagtccat--aatttacaaaatgtcaatcaaatcag 13610799  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagcatgaccaaattgatt 200  Q
    | ||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||| ||| || |||| |   ||||     |||    
T  13610800 tccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaaccccttacaaggcttaccacgtcagatgacacgcaaac---acca-----att 13610891  T
Q  201 gatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    |||||||| |||||| ||||||| |||||| || ||||||||||||||||    
T  13610892 gatttacaaaaaatttccaaggaccaaattgatggattttcagaaaattg 13610941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 225 - 362
Target Start/End: Complemental strand, 7051132 - 7050995
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaaaatttccaacgactctttctccttttcaagctctatg 324  Q
    |||||| |||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||| || |||||||| |||||||||||||    
T  7051132 caaattgattgatttacagaaaattgccaaggaacaaattgattgattttcagaaaattgcaaaattcccaacggctatttctcctcttcaagctctatg 7051033  T
Q  325 tacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    || |||||||||||||||||||||||||| || |||||    
T  7051032 taaaatgatgatgtgagagagcttcaatgttggtgtcc 7050995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 11 - 284
Target Start/End: Original strand, 32454269 - 32454542
Alignment:
Q  11 cttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgtt 110  Q
    |||||||||| |||||||  || | ||||||||| |||||| ||||||||| | ||||||   |||||||||||||||  ||||||| ||| ||||||||    
T  32454269 cttgaattttgaaaaatcggccaatttcgtccttgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgtt 32454368  T
Q  111 aagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattgatttacag 209  Q
    || ||||||||||||||||||||||||||   |||||||||| |||| ||||||||||||| ||| || |||||||  ||||||| |||||||||||||     
T  32454369 aatttggtctgttaacggaggtgacgtgtcacgttaacctctaacaaagcttaccacgtcagatgccacgcaagcagagaccaaactgattgatttacac 32454468  T
Q  210 aaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    |||||| | |||||  ||||  || ||||| || ||||||  |||||| |||||||||  ||| |||||||||||    
T  32454469 aaaatttcgaaggacgaaatcgatagatttacacaaaatt-ccaaggaccaaattgatgaattttcagaaaattg 32454542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 11 - 284
Target Start/End: Complemental strand, 3480725 - 3480452
Alignment:
Q  11 cttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgtt 110  Q
    |||||||||| |||||||  || | ||||||| | |||||| ||||||||| |  |||||   |||||||||||||||  ||||||| ||| ||||||||    
T  3480725 cttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaactagtccctgaatttacaaaatgtcaatcaaattagtccctccgtt 3480626  T
Q  111 aagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattgatttacag 209  Q
    || ||||||||||||||||||||||||||   ||||| |||| |||| ||||||||||||| ||| || |||||||  ||||||| |||||||||||||     
T  3480625 aatttggtctgttaacggaggtgacgtgtcacgttaatctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacac 3480526  T
Q  210 aaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  3480525 aaaatttcgaaggacgaaattgatggatttacacaaaatt-ccaaggaccaaattgatggattttcagaaaattg 3480452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 5 - 220
Target Start/End: Original strand, 7371190 - 7371406
Alignment:
Q  5 ttcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacc 104  Q
    ||||| ||||||||||||||||||  || |||| |||| | ||||||||||||||  ||||| ||| | ||||||| |||||||  ||||||||||| ||    
T  7371190 ttcgtccttgaattttcaaaaatcggccaaattggtccctgaattttgcgaaatagatattttgtccttgaatttataaaatgtcaatcaaatcagtccc 7371289  T
Q  105 tccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattgat 203  Q
    ||| ||||||||||||||||| ||||||||||||||   ||||||||||| ||| |||||||||||| ||  || |||||||  |||||||||||| |||    
T  7371290 tcctttaagttggtctgttaaaggaggtgacgtgtaacattaacctcttataagacttaccacgtcagataccacgcaagcagggaccaaattgatggat 7371389  T
Q  204 ttacagaaaattgccaa 220  Q
    || | ||||||||||||    
T  7371390 tttccgaaaattgccaa 7371406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 74 - 284
Target Start/End: Original strand, 32437211 - 32437422
Alignment:
Q  74 gaatttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcata 173  Q
    ||||||||||||||   ||||||||| | |||||||||||||||| ||||||||||| |||||||||  |||||||||| |||| ||||||||||||| |    
T  32437211 gaatttacaaaatgccaatcaaatcaatccctccgttaagttggtatgttaacggagatgacgtgtaacgttaacctctgacaaagcttaccacgtcaga 32437310  T
Q  174 tgtcatgcaagca-tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgatt 272  Q
    |  || |||||||  ||||||| ||||||||||||| || ||| || |||| |||||| || ||||| || |||||| ||| ||| ||||||||| ||||    
T  32437311 taccacgcaagcagggaccaaactgattgatttacacaacatttccgaggaccaaattgatggatttacacaaaattttcacggaccaaattgatggatt 32437410  T
Q  273 atcagaaaattg 284  Q
     |||||||||||    
T  32437411 ttcagaaaattg 32437422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 5 - 250
Target Start/End: Original strand, 33276816 - 33277053
Alignment:
Q  5 ttcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacc 104  Q
    ||||| |||||||||| ||||||||  | |||||||   |||||||||||||||||||||||||     ||||||| |||||||  ||||||||||| ||    
T  33276816 ttcgtccttgaattttaaaaaatcagtcaaattcgtttctaaattttgcgaaatatctatttagct---gaatttataaaatgtcaatcaaatcagttcc 33276912  T
Q  105 tccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagcatgaccaaattgattgatt 204  Q
    |||||    |||   |||||||||||||||| |||| |||||| |||||| ||| || ||||||||| |||||| |   ||  |||||||||||||||||    
T  33276913 tccgta---ttgacatgttaacggaggtgacatgtactgttaatctcttataagactgaccacgtcagatgtcacgtttgc--gaccaaattgattgatt 33277007  T
Q  205 tacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    || |||||||||  |||||||||||| |||||||||||||||||||    
T  33277008 tatagaaaattgtaaaggatcaaattgattgattttcagaaaattg 33277053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 186
Target Start/End: Original strand, 14337687 - 14337861
Alignment:
Q  11 cttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgtt 110  Q
    ||||||||||  ||||||| || ||||  |||| ||||||||| |||| |||| ||  |   |||||||||||||| |  ||||||||||| ||||| ||    
T  14337687 cttgaattttttaaaatcagccaaatttatcctcaaattttgcaaaatgtctaattcattcccgaatttacaaaatatcaatcaaatcagtccctccatt 14337786  T
Q  111 aagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca 186  Q
    ||||||| |||||||| |||||||| |||| | |||||||||||||| |||||||| |||| |||||| |||||||    
T  14337787 aagttggcctgttaacagaggtgacatgtactattaacctcttacaa-gcttaccatgtcagatgtcacgcaagca 14337861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 225 - 307
Target Start/End: Complemental strand, 6902785 - 6902703
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaaaatttccaacgactctttct 307  Q
    |||||| |||||||| |||||||||||||||||  ||||||||||||| |||||||||| ||||||| |||||||||||||||    
T  6902785 caaattgattgatttacagaaaattgtcaaggactaaattgattgattttcagaaaattacaaaattcccaacgactctttct 6902703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 226 - 308
Target Start/End: Original strand, 21091297 - 21091379
Alignment:
Q  226 aaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaaaatttccaacgactctttctc 308  Q
    ||||| ||||||||  |||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  21091297 aaattgattgatttatagaaaattgtcaaggaccaaattgattgattttcataaaattgcaaaatttccaacggctctttctc 21091379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 225 - 297
Target Start/End: Original strand, 33276994 - 33277066
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaaaatttccaac 297  Q
    |||||| ||||||||  |||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||    
T  33276994 caaattgattgatttatagaaaattgtaaaggatcaaattgattgattttcagaaaattgcaaaatttccaac 33277066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 6902436 - 6902386
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||    
T  6902436 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgttggtgtcc 6902386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 227 - 285
Target Start/End: Complemental strand, 9399920 - 9399862
Alignment:
Q  227 aattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 285  Q
    |||| |||||||| ||||||||||||||||| |||||||||||||| ||||||||||||    
T  9399920 aattgattgatttacagaaaattgtcaaggatcaaattgattgattttcagaaaattgc 9399862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 32454859 - 32454909
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||    
T  32454859 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgttggtgtcc 32454909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 10568410 - 10568479
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||||| |||||||||||||||||||  | ||||||||||| ||||| ||||||||| |||||||||    
T  10568410 caaattcgtccttgaattttcaaaaatcagtcaaattcgtccttgaatttagcgaaatatttatttagtc 10568479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 18644698 - 18644650
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgt 360  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  18644698 ttcaagctccatgtacaatgatgatgtgagagagcttcaatgatgatgt 18644650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 7371681 - 7371731
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| |||||    
T  7371681 ttcaagctatatgtacaatgatgaggtgagagagcttcaatgctggtgtcc 7371731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 32437729 - 32437779
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    ||||||||||||||||||||||||||||||| |||||||||| || |||||    
T  32437729 ttcaagctctatgtacaatgatgatgtgagaaagcttcaatgttgttgtcc 32437779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 33267595 - 33267645
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||| ||||||||||||||||||||||||||| || |||||    
T  33267595 ttcaagctctatgtgcaatgatgatgtgagagagcttcaatgttggtgtcc 33267645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 6899496 - 6899565
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    |||||| || |||||||||||||||||||  | ||||||||  ||||||||| |||||||||||||||||    
T  6899496 caaatttgtccttgaattttcaaaaatcagtcaaattcgtctctaaattttgtgaaatatctatttagtc 6899565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 353
Target Start/End: Complemental strand, 11356672 - 11356631
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatg 353  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  11356672 ttcaagctctatgtacaatgatgaggtgagagagcttcaatg 11356631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 20523377 - 20523446
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||| | || |||||||||||||||   | ||||||||||| |||||||||||||||||||||||||    
T  20523377 caaattcttcctagaattttcaaaaatcggtcaaattcgtccttgaattttgcgaaatatctatttagtc 20523446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 8605403 - 8605351
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgc 53  Q
    ||||||||| ||||||||||||||||||| || ||||||||| ||||||||||    
T  8605403 caaattcgtccttgaattttcaaaaatcagccaaattcgtccctaaattttgc 8605351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 9399595 - 9399545
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||| ||| ||||||||||||||||||||||||||| || |||||    
T  9399595 ttcaagctctctgttcaatgatgatgtgagagagcttcaatgttggtgtcc 9399545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 14338584 - 14338526
Alignment:
Q  5 ttcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatcta 63  Q
    ||||| |||||||||| |||||||| || |||||||||| |||||||||||||| ||||    
T  14338584 ttcgtccttgaatttttaaaaatcagccaaattcgtcctcaaattttgcgaaatgtcta 14338526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 20524854 - 20524804
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||| || |||||||||||||| || |||||    
T  20524854 ttcaagctctatgtacaatgatgaggttagagagcttcaatgttggtgtcc 20524804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 11357083 - 11357023
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 285  Q
    |||||| |||||||| |||||||||| |||||| ||||||||| || | ||||||||||||    
T  11357083 caaattgattgatttacagaaaattgccaaggaccaaattgatggaatttcagaaaattgc 11357023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 32439193 - 32439135
Alignment:
Q  12 ttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||||| |||||||   | ||||||||| | |||||||||||||||||||||||||    
T  32439193 ttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtc 32439135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 13613694 - 13613626
Alignment:
Q  2 aaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    |||||||| |||||||||| |||||||   | ||||||||| | |||||||||||||||| | ||||||    
T  13613694 aaattcgtccttgaattttgaaaaatcggtcaaattcgtccctgaattttgcgaaatatcaaattagtc 13613626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 14337898 - 14337926
Alignment:
Q  188 gaccaaattgattgatttacagaaaattg 216  Q
    |||||||||||||||||||||||||||||    
T  14337898 gaccaaattgattgatttacagaaaattg 14337926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 217; Significance: 1e-119; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 353
Target Start/End: Original strand, 48829367 - 48829722
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| ||||||||||||||| ||| || ||||  | | | ||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||    
T  48829367 caaattcgtccttgaattttcaaaattcagccaaatttattcctgaattttgcgaaatatctatttagtcctcggatttacaaaatgtccatcaaatcag 48829466  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagc-atgaccaaattgat 199  Q
    | |||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| | |||| |||||| | ||||||||||||    
T  48829467 tccctcggttaagttggtctgttaacggaggtgaagtgtactgttaacctcttacaaggcttaccacgtcagaggtcacgcaagcaaggaccaaattgat 48829566  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaaaatttccaacga 299  Q
    ||||||||||||||||| |||||| |||||| | ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||     
T  48829567 tgatttacagaaaattgtcaaggaccaaattgaatgatttttagaaaattgtcaaggaacaaattgattgattttcagaaaattgcaaaattcccaacgg 48829666  T
Q  300 ctc--tttctccttttcaagctctatgtacaatgatgatgtgagagagcttcaatg 353  Q
    |||  |||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  48829667 ctctttttctcctcttcaagctctatgtacaatgatgatgtgaaagagcttcaatg 48829722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 51686472 - 51686162
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| ||| ||||||||||||||| || ||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  51686472 caaattcgtccttaaattttcaaaaatcagccaaattcgtccctaaattttgcgaaatatttatttagtcctcgaatttacaaaatgttcatcaaatcag 51686373  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | |||| || |||||||| |||||||| ||||||||||||  ||||||||||||||| ||||||||||||| |||||| |||||||  ||||||||||||    
T  51686372 tccctctgtcaagttggtatgttaacgaaggtgacgtgtaccgttaacctcttacaaagcttaccacgtcagatgtcacgcaagcagggaccaaattgat 51686273  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaaaatttccaacga 299  Q
    |||||||||||||||||||||||| |||||| || |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||| |    
T  51686272 tgatttacagaaaattgccaaggaccaaattgatcgattttcagaaaattgccaaggaacaaattgattgattttcagaaaattgcaaaattcccaacta 51686173  T
Q  300 ctctttctcct 310  Q
    | |||||||||    
T  51686172 ccctttctcct 51686162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 611300 - 610992
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||| || ||||||||| | |||||| ||||||| |||||||| |   |||||||||||||||  ||||||| ||    
T  611300 caaattcgtccttgaattttaaaaaatcagccaaattcgtccctgaatttttcgaaatagctatttagcccctgaatttacaaaatgtcaatcaaattag 611201  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||| | ||| || |||||||  || |||||||||    
T  611200 tccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgttagatgccacgcaagcagggatcaaattgat 611101  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaaaatttccaacga 299  Q
    ||||||||||||||||||||||||  ||||| || ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||  ||||||    
T  611100 tgatttacagaaaattgccaaggactaaattgatggattttcagaaaattgtcaaggaccaaattgattgattttcagaaaattgcaaaattctcaacga 611001  T
Q  300 ctctttctc 308  Q
     ||||||||    
T  611000 ttctttctc 610992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 34 - 310
Target Start/End: Complemental strand, 46114150 - 46113873
Alignment:
Q  34 aattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtg 133  Q
    |||| |||||| ||||||||||||||||||||||||||| |||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||||    
T  46114150 aatttgtccttgaattttgcgaaatatctatttagtcattgaatttacaaaatgtcaatcaaatcagtcactccgttaagttggtctgttaacggaggtg 46114051  T
Q  134 acgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattgatttacagaaaattgccaaggatcaaattaa 232  Q
    |||||||  ||||||||||||||||| |||||| |||| ||| || |||||||  ||||||||||||||||||||||||||||| ||||||  ||||| |    
T  46114050 acgtgtaacgttaacctcttacaaggtttaccatgtcagatgccacgcaagcagagaccaaattgattgatttacagaaaattgtcaaggactaaattga 46113951  T
Q  233 ttgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaaaatttccaacgactctttctcct 310  Q
    | ||||||||||| |||| |||||| |||||||||||||| ||||||||||| ||||||  |||||||||||||||||    
T  46113950 tggattttcagaatattgccaaggaccaaattgattgattttcagaaaattgtaaaattctcaacgactctttctcct 46113873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 42282551 - 42282301
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||||||||||||  | |||||||   | ||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  42282551 caaattcgtccttgaattttcaaaaatcagtcaaattcgtttctgaattttgcgaaatatctatttagtccttgaatttacaaaatgttcattaaatcag 42282452  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | |||||||||||||||| ||||||| |||||||| ||||  ||||||||||||||||| ||||||||||| ||| || |||||||  ||||||||||||    
T  42282451 tccctccgttaagttggtatgttaaccgaggtgacatgtaccgttaacctcttacaaggtttaccacgtcagatgccacgcaagcagggaccaaattgat 42282352  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    |||||||||||||||||||||||| |||||| |||| |||| |||||||||    
T  42282351 tgatttacagaaaattgccaaggaccaaattgattgtttttaagaaaattg 42282301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 17517051 - 17516801
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| ||||||||||||||||||   | ||||||| | | ||||||||||||||  ||||| ||| | |||||||||||||||  ||||||||||    
T  17517051 caaattcgtccttgaattttcaaaaatcggtcaaattcgttcatgaattttgcgaaatagttattttgtccttgaatttacaaaatgtcaatcaaatcag 17516952  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | |||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||| ||| || |||||||  ||||||||||||    
T  17516951 tccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacctcttacaaggcttaccacgtcagatgccacgcaagcagggaccaaattgat 17516852  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    ||||||||||||||||| |||||| |||||| || ||||||||||||||||    
T  17516851 tgatttacagaaaattgtcaaggaccaaattgatggattttcagaaaattg 17516801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 2 - 250
Target Start/End: Original strand, 23291582 - 23291830
Alignment:
Q  2 aaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagt 101  Q
    |||||||| |||||||||| |||||||  || ||||||||| | |||||||||||||||||||||||||   |||||||||||||||  |||||||||||    
T  23291582 aaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaatttacaaaatgtcaatcaaatcagt 23291681  T
Q  102 acctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgatt 200  Q
     ||||||||||||| ||||||| || |||||||||||||  ||||||||||||||||||||||||||||| |||||| |||||||  |||||||||||||    
T  23291682 ccctccgttaagttagtctgtt-acagaggtgacgtgtaacgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcagggaccaaattgatt 23291780  T
Q  201 gatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
     ||||||||||||||| | |||| |||||| || ||||||||||||||||    
T  23291781 aatttacagaaaattgtcgaggaccaaattgatggattttcagaaaattg 23291830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 2661986 - 2661702
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| ||||||| ||| | ||||||| | |||||||||||||||| | ||||||   |||||||||||||||  ||||||||||    
T  2661986 caaattcgtccttgaattttgaaaaatcgaccaatttcgtccgtgaattttgcgaaatatcaaattagtccatgaatttacaaaatgtcaatcaaatcag 2661887  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||||| |||||||||||||||||| |||||||||||||  |||||||||| |||| ||||||||||||||||| ||||||||||  ||||||| | ||    
T  2661886 tccctccattaagttggtctgttaacagaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcatatgccatgcaagcagggaccaaactaat 2661787  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||||||| |||||| ||||||| |||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  2661786 tgatttacacaaaatttccaaggaccaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 2661702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 2379061 - 2378811
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||   | | ||||||| | |||||||| ||||| |||||||||| | |||||||||||||||  ||||||||||    
T  2379061 caaattcgtccttgaattttaaaaaatcggtcaatttcgtccctgaattttgcaaaatagctatttagtccttgaatttacaaaatgtcaatcaaatcag 2378962  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | |||||||||||||||| ||||||||||||||||||||| ||||||| |||||||  ||||||||||||| |||||| |||||||  ||||||||||||    
T  2378961 tccctccgttaagttggtttgttaacggaggtgacgtgtaatgttaacatcttacatagcttaccacgtcagatgtcacgcaagcagggaccaaattgat 2378862  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    ||||||| ||||||||||||| || |||||| || ||||||||||||||||    
T  2378861 tgatttaaagaaaattgccaatgaccaaattgatggattttcagaaaattg 2378811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 54412625 - 54412371
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| | |||||||| ||||||    | ||||||||||| |||||||||| |||||||||||||    |||||||||||||||  ||||||||||    
T  54412625 caaattcgtccgtgaattttaaaaaattggtcaaattcgtccttgaattttgcgagatatctatttagttcctgaatttacaaaatgtcaatcaaatcag 54412526  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||||| |||||||||| |||||||||||||||||||||  |||||||| |||||| ||||||||||||| ||| || |||||||  ||||||||||||    
T  54412525 tccctccattaagttggtgtgttaacggaggtgacgtgtaacgttaaccttttacaatgcttaccacgtcagatgccacgcaagcagggaccaaattgat 54412426  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaa 254  Q
    |||||||||||||||||||||||| |||||| || |||||||| |||||||||||    
T  54412425 tgatttacagaaaattgccaaggaccaaattgatggattttcataaaattgtcaa 54412371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 46 - 250
Target Start/End: Complemental strand, 21350638 - 21350433
Alignment:
Q  46 aattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgtt 145  Q
    |||||||||||||| |||||| ||| | |||||||||||||||  ||||||||||| |||||||||||||||| |||||||||||||| ||||||  |||    
T  21350638 aattttgcgaaatagctattttgtccttgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtatgttaacggaggtgtcgtgtaacgtt 21350539  T
Q  146 aacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcaga 244  Q
    |||||||||||||||||||||||||| |||||| |||||||  |||||||||||||||||||||||||||||||||| | |||||| ||  |||||||||    
T  21350538 aacctcttacaaggcttaccacgtcagatgtcacgcaagcagggaccaaattgattgatttacagaaaattgccaagaaccaaattgatgaattttcaga 21350439  T
Q  245 aaattg 250  Q
    ||||||    
T  21350438 aaattg 21350433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 53094351 - 53094067
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||  || | ||||||| | |||||||||||||||| | ||||||   |||||||||||||||  ||||||| ||    
T  53094351 caaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatgag 53094252  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | |||||||||||||||||||||||||||||||||||||   |||||||||| |||| ||||||||||||| |||||| ||||||| |||||||| ||||    
T  53094251 tccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgtcacgcaagcagtgaccaaactgat 53094152  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||| ||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  53094151 tgattcacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 53094067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 30598348 - 30598598
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| ||||||||||||||||||   | |||| |||| | |||||||||||||| |||||| ||| | |||||||||||||||  ||||||| ||    
T  30598348 caaattcgtccttgaattttcaaaaatcggtcaaatttgtccctgaattttgcgaaatagctattttgtccttgaatttacaaaatgtcaatcaaattag 30598447  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | |||||||||||||||| |||||||||||||||||||||  ||||| |||||||||||||| |||||||| ||  || |||||||  |||||||| |||    
T  30598448 tccctccgttaagttggtatgttaacggaggtgacgtgtaacgttaaactcttacaaggcttgccacgtcagataccacgcaagcagagaccaaatagat 30598547  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    ||||||||||||||||| ||| || |||||| || ||||||||||||||||    
T  30598548 tgatttacagaaaattgtcaatgaccaaattgatggattttcagaaaattg 30598598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 44267992 - 44268242
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| ||||||||||||||||||  || ||||| ||  | |||||||||||||| |||||| ||| | ||||||| |||||||  ||||||||||    
T  44267992 caaattcgtccttgaattttcaaaaatcggccaaattcatctctgaattttgcgaaatagctattttgtccttgaatttataaaatgtcaatcaaatcag 44268091  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | |||||||||||||||| |||||||||||||||||||||  ||||||||| ||||||| |||||||||||  || || | |||||  |||||||||| |    
T  44268092 tccctccgttaagttggtatgttaacggaggtgacgtgtaacgttaacctcctacaaggtttaccacgtcagttgccacgtaagcagggaccaaattggt 44268191  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    |||||||||||||||||||||||| |||||| || || ||| |||||||||    
T  44268192 tgatttacagaaaattgccaaggaccaaattgatggacttttagaaaattg 44268242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 3150263 - 3150547
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||   | | ||||||| | |||||||||||||||| | ||||||   |||||||||||||||  ||||||||||    
T  3150263 caaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcag 3150362  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagc-atgaccaaattgat 199  Q
    | ||||| ||||||||||||||||||||| ||||||||||  |||||||||| |||| | ||||||||||| ||| || ||||||   ||||||| ||||    
T  3150363 tccctccattaagttggtctgttaacggatgtgacgtgtaacgttaacctctgacaaagattaccacgtcagatgccacgcaagcggagaccaaactgat 3150462  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||||||| |||||| ||||||| |||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  3150463 tgatttacacaaaatttccaaggaccaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 3150547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 38193588 - 38193304
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||  || | ||||||| | |||||||||||||||| | ||||||   |||||||||||||||  ||||||||||    
T  38193588 caaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcag 38193489  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | | ||||||||||||||||||||||||||||||| |||   |||||||||| |||| ||||||||||||| ||| || |||||||  ||||||| ||||    
T  38193488 tccatccgttaagttggtctgttaacggaggtgacatgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgat 38193389  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  38193388 tgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 38193304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 46308818 - 46309102
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||  || | ||||||| | |||||||||||||||| | ||||||   |||||||||||||||  ||||||||||    
T  46308818 caaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcag 46308917  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||||||||||||||| |||||||||||||||||||||   |||||||||| |||| ||||||||||||| ||| || |||||||  ||||||| ||||    
T  46308918 tccctccgttaagttggcctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgat 46309017  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| | |||||||||    
T  46309018 tgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggatttttagaaaattg 46309102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 46609160 - 46609444
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    |||||||||||||||||||| |||||||  || | ||||||| | ||||||| |||||||| | ||||||   |||||||||||||||  ||||||||||    
T  46609160 caaattcgttcttgaattttgaaaaatcggccaatttcgtccctgaattttgtgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcag 46609259  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||| |||||||||||| |||||| |||||||||||||   |||||||||| |||| ||||||||||||| |||||| |||||||  ||||||| ||||    
T  46609260 tccctacgttaagttggtttgttaatggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgtcacgcaagcagggaccaaactgat 46609359  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  46609360 tgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 46609444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 41979430 - 41979180
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||  || | ||||||| | |||||||||||||||| | ||||||   ||||||||||||| |  |||||||||     
T  41979430 caaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatttcaatcaaatcaa 41979331  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||||||||||||| ||| || |||||||  ||||||| ||||    
T  41979330 tccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgat 41979231  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    ||||||||| ||||||  | |||| |||||| || ||||||||||||||||    
T  41979230 tgatttacacaaaattttcgaggaccaaattgatggattttcagaaaattg 41979180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 46310514 - 46310230
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    |||||||||  ||||||||| |||||||   | | ||||||| | |||||||||||||||| | ||||||   |||||||||||||||  |||||| |||    
T  46310514 caaattcgtctttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaaccag 46310415  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | |||||||||||||||||||||||||||||||||||||   |||||||||| |||| ||||||||||||| ||| || |||||||  ||||||| ||||    
T  46310414 tccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgat 46310315  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  46310314 tgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 46310230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 46611381 - 46611097
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| ||||||    | | ||||||| | |||||||||||||||| | ||||||   ||||||| |||||||  ||||||||||    
T  46611381 caaattcgtccttgaattttgaaaaatttgtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttataaaatgtcaatcaaatcag 46611282  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagc-atgaccaaattgat 199  Q
    | ||||||||||||||| |||||||||||||||||||||   |||||||||| |||| ||||||||||||| ||| ||||||||| | ||||||| ||||    
T  46611281 tccctccgttaagttggcctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccatgcaagcaaggaccaaactgat 46611182  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||||||| |||||| | |||||  ||||| || ||||| || |||||| ||||||| ||||||||| |||| | |||||||||    
T  46611181 tgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaattttcaaggaccaaattgatggatttttagaaaattg 46611097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 53187753 - 53188037
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    |||||| || |||||||||| |||||||   | | ||||||| | |||||||||||||||| | ||||||   |||||||||||||||  ||||||||||    
T  53187753 caaatttgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcag 53187852  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagc-atgaccaaattgat 199  Q
    | |||||||||||||| |||| ||||||||||||||||||  |||||||||| |||| | ||||||||||| ||| || ||||||   ||||||| ||||    
T  53187853 tccctccgttaagttgatctggtaacggaggtgacgtgtaacgttaacctctgacaaagattaccacgtcagatgccacgcaagcggagaccaaactgat 53187952  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||||||| |||||| ||||||| |||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  53187953 tgatttacacaaaatttccaaggaccaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 53188037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 12 - 250
Target Start/End: Original strand, 7883350 - 7883589
Alignment:
Q  12 ttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgtta 111  Q
    ||||||||| |||||||  || | ||||||| ||||||||| |||||||| | |||||    ||||||||||||| |  ||||||||||| |||||||||    
T  7883350 ttgaattttgaaaaatcggccaatttcgtccctaaattttgtgaaatatcaaattagttcctgaatttacaaaatttcaatcaaatcagtccctccgtta 7883449  T
Q  112 agttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattgatttacaga 210  Q
    |||||||||||||||||||||||||||||  |||||||||| |||| ||||||||||||| ||| || |||||||  ||||||| ||||||||||||| |    
T  7883450 agttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacaca 7883549  T
Q  211 aaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    ||||| ||||||| |||||| || |||||||| |||||||    
T  7883550 aaatttccaaggaccaaattgatggattttcaaaaaattg 7883589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 35903836 - 35904086
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    |||||| || |||||||||| |||||||| || | ||| ||| | |||||||| ||||||| | ||||||   |||||||||||||||  ||||||| ||    
T  35903836 caaatttgtccttgaattttgaaaaatcagccaatttcatccctgaattttgcaaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattag 35903935  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||||| ||||||||||||||||||||||||||||||||  |||||||||| |||| ||||||||| ||| ||| || |||||||  ||||||| ||||    
T  35903936 tccctccattaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacatcagatgccacgcaagcagggaccaaactgat 35904035  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    ||||||||| |||||| ||||||| |||||| || ||||||||||||||||    
T  35904036 tgatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 35904086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 54900152 - 54899902
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||  || | ||||||| | |||||||||||||||| | || |||   |||||||||||||||  ||||||||||    
T  54900152 caaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaatttgtccctgaatttacaaaatgtcaatcaaatcag 54900053  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | |||||||||||||||| |||||||||||||||||||||  |||||| ||| |||| ||||||||||||| ||| || |||||||  ||||||| ||||    
T  54900052 tccctccgttaagttggtatgttaacggaggtgacgtgtaacgttaacgtctgacaaagcttaccacgtcaaatgccacgcaagcagagaccaaactgat 54899953  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    ||||||||| ||||||  |||||| |||||| || |||||| |||||||||    
T  54899952 tgatttacacaaaattttcaaggaccaaattgatggatttttagaaaattg 54899902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 36 - 284
Target Start/End: Original strand, 53092669 - 53092918
Alignment:
Q  36 ttcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgac 135  Q
    ||||||| | |||||||||||||||| | ||| ||   ||||||| |||||||  ||||||||||| |||||||||||||||||||||||||||||||||    
T  53092669 ttcgtccctgaattttgcgaaatatcaaattaatccctgaatttataaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgac 53092768  T
Q  136 gtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattgatttacagaaaattgccaaggatcaaattaatt 234  Q
    |||||  |||||||||| |||| | ||||||||||| ||| || |||||||  ||||||| ||||||||||||| |||||| |||| || |||||| ||     
T  53092769 gtgtaacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 53092868  T
Q  235 gattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  53092869 gatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 53092918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 27897162 - 27897391
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||| ||||| |||||| ||||||  | | ||||||||| | |||||||| || || ||||||||||   ||||||||||||| |  ||||||| ||    
T  27897162 caaattctttcttaaattttaaaaaatggatcaaattcgtccatgaattttgc-aattagctatttagtctctgaatttacaaaatatcaatcaaattag 27897260  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | | |||||||||||||| |||||||||||||||||||||  |||||||||||||| |||||||||||||| |||||| ||||| |  ||||||||||||    
T  27897261 tccatccgttaagttggtttgttaacggaggtgacgtgtaacgttaacctcttacatggcttaccacgtcagatgtcacgcaagtagggaccaaattgat 27897360  T
Q  200 tgatttacagaaaattgccaaggatcaaatt 230  Q
    |||||||||||||||||||||||| ||||||    
T  27897361 tgatttacagaaaattgccaaggaccaaatt 27897391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 46 - 230
Target Start/End: Complemental strand, 43767080 - 43766895
Alignment:
Q  46 aattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgtt 145  Q
    |||||||| ||||| |||||| ||| | |||||||||||||||  |||||||||||  |||||||| |||||||||||||||||||||| |||||  |||    
T  43767080 aattttgcaaaatagctattttgtccttgaatttacaaaatgtcaatcaaatcagtcactccgttacgttggtctgttaacggaggtgatgtgtaacgtt 43766981  T
Q  146 aacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattgatttacagaaaattgccaaggatcaaatt 230  Q
    ||||||||| |||||||||||||||| |||||| |||||||  |||||||||||||||||||| |||||||| |||||| ||||||    
T  43766980 aacctcttataaggcttaccacgtcaaatgtcacgcaagcagggaccaaattgattgatttacggaaaattgtcaaggaccaaatt 43766895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 44795968 - 44795684
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||  |  | ||||| | | |||||||||||||||| | ||||||   ||||||||||||| |  | ||||||||    
T  44795968 caaattcgtccttgaattttgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccatgaatttacaaaatatcaaacaaatcag 44795869  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||||||||||||||||||||||| ||||||||||||||  |||||||||| |||| ||||||||||| | ||| || |||||||  || |||| ||||    
T  44795868 tccctccgttaagttggtctgttaatggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtaagatgccacgcaagcagggatcaaactgat 44795769  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||||||| |||||| ||||||| |||||| ||  |||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  44795768 tgatttacacaaaatttccaaggaccaaattgatgaatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 44795684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 38191906 - 38192178
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| ||| |||||| ||||||   || | ||||||| | |||||||||||||||| | ||||||   |||||||||||||||  ||||||||||    
T  38191906 caaattcgtccttaaattttgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcag 38192005  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||||||||||||||||||||||||||||||||| |||   |||||||||| |||| |||||||||            ||||||| |||||||| ||||    
T  38192006 tccctccgttaagttggtctgttaacggaggtgacatgtcacgttaacctctgacaaagcttaccac------------gcaagcagtgaccaaactgat 38192093  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||||||| |||||| | |||||  |||||||| ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  38192094 tgatttacacaaaatttcgaaggacgaaattaatggatttacataaaatttccaaggaccaaattgatggattttcagaaaattg 38192178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 74 - 283
Target Start/End: Original strand, 28626495 - 28626705
Alignment:
Q  74 gaatttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcata 173  Q
    |||||||||||||||  ||||||| ||| |||||||||| ||||||||||||||||||||||||||   |||||||||| |||| || |||||||||| |    
T  28626495 gaatttacaaaatgtcaatcaaattagtccctccgttaaattggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcgtaccacgtcaga 28626594  T
Q  174 tgtcatgcaagca-tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgatt 272  Q
    || || |||||||  |||||||||||| |||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| ||||    
T  28626595 tgccacgcaagcagggaccaaattgatggatttacacaaaatttcgaaggactaaattgatggatttacacaaaatttccaaggaccaaattgatggatt 28626694  T
Q  273 atcagaaaatt 283  Q
     ||||||||||    
T  28626695 ttcagaaaatt 28626705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 225 - 308
Target Start/End: Complemental strand, 42282360 - 42282277
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaaaatttccaacgactctttctc 308  Q
    |||||| |||||||| |||||||||| |||||| ||||||||||| || | |||||||||||||||| |||||| |||||||||    
T  42282360 caaattgattgatttacagaaaattgccaaggaccaaattgattgtttttaagaaaattgcaaaattcccaacggctctttctc 42282277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 27899214 - 27899145
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||||| |||||||||| |||||||  || ||||||||||| |||||||||||||||||||||||||    
T  27899214 caaattcgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtc 27899145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 41978870 - 41978820
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||    
T  41978870 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgttggtgtcc 41978820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 42282019 - 42281969
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||    
T  42282019 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgttggtgtcc 42281969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 51684621 - 51684699
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaattt 79  Q
    ||||||||| ||||||||||||||||||| || ||||| ||| | |||||||| |||||||||||||||| | ||||||    
T  51684621 caaattcgtccttgaattttcaaaaatcagccaaattcatccctgaattttgcaaaatatctatttagtccttgaattt 51684699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 51685897 - 51685847
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||    
T  51685897 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgttggtgtcc 51685847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 53188347 - 53188397
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||    
T  53188347 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgttggtgtcc 53188397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 2226285 - 2226216
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||||| |||||||||| |||||||  || ||||||||| | |||||||||||||||||||||||||    
T  2226285 caaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtc 2226216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 21348734 - 21348803
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    |||||| || |||||||||| |||||||  || ||||||||||| |||||||||||||||||||||||||    
T  21348734 caaatttgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtc 21348803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 23293303 - 23293234
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    |||||| ||||||||||||  |||||||| || |||||| |||| |||||||||||||||||||||||||    
T  23293303 caaatttgttcttgaatttcgaaaaatcagccaaattcgcccttgaattttgcgaaatatctatttagtc 23293234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 53190892 - 53190823
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||||| |||||||||| |||||||  || ||||||||| | |||||||||||||||||||||||||    
T  53190892 caaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtc 53190823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 17516860 - 17516800
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 285  Q
    |||||| |||||||| ||||||||||||||||| ||||||||| |||| ||||||||||||    
T  17516860 caaattgattgatttacagaaaattgtcaaggaccaaattgatggattttcagaaaattgc 17516800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 178
Target Start/End: Complemental strand, 24846620 - 24846447
Alignment:
Q  5 ttcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcga--atttacaaaatgttcatcaaatcagta 102  Q
    ||||| |||| ||||| ||||||||    |||||||||| |||||||||||||||| |||||  | || |   |||| ||||||||  || ||||||||     
T  24846620 ttcgtccttggatttttaaaaatcaggtaaattcgtcctcaaattttgcgaaatatatatttt-taatagtgtattttcaaaatgtcaattaaatcagtc 24846522  T
Q  103 cctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtca 178  Q
    |||||||||||||||  |||||||||||||||  |||| |||||||   ||||||||||||| |||||| ||||||    
T  24846521 cctccgttaagttgga-tgttaacggaggtgatatgtactgttaactgtttacaaggcttactacgtcaaatgtca 24846447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 7883896 - 7883946
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||| ||||||||||||||||||||| || |||||    
T  7883896 ttcaagctctatgtacaatgttgatgtgagagagcttcaatgttggtgtcc 7883946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 27897762 - 27897812
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||| ||||||||||||||||| || |||||    
T  27897762 ttcaagctctatgtacaatgatgaggtgagagagcttcaatgttggtgtcc 27897812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 35904396 - 35904446
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    ||||||||| |||||||||||||||||||||||||||||||| || |||||    
T  35904396 ttcaagctccatgtacaatgatgatgtgagagagcttcaatgttggtgtcc 35904446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 54898448 - 54898517
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||||| |||||||||| |||||||   | ||||||||| | |||||||||||||||||||||||||    
T  54898448 caaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtc 54898517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 2660223 - 2660301
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaattt 79  Q
    ||||||||| |||||||||| ||||||| ||| | ||||||| | |||||||||||||||| | |||||| | ||||||    
T  2660223 caaattcgtccttgaattttgaaaaatcgaccaatttcgtccctgaattttgcgaaatatcaaattagtccttgaattt 2660301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 21350141 - 21350091
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||| | ||||||||||||||||| || |||||    
T  21350141 ttcaagctctatgtacaatgataaggtgagagagcttcaatgttggtgtcc 21350091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 23292141 - 23292191
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||| |||||| |||||||||| || |||||    
T  23292141 ttcaagctctatgtacaatgatgaggtgagaaagcttcaatgttggtgtcc 23292191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 158
Target Start/End: Original strand, 23875760 - 23875834
Alignment:
Q  84 aatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaag 158  Q
    |||||| ||||||||||| ||||  |||| ||| | |||||| ||||||||| |||||||||||||||| |||||    
T  23875760 aatgttaatcaaatcagtccctctattaacttgatatgttaatggaggtgacatgtattgttaacctctcacaag 23875834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 2377040 - 2377109
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    |||||||||| ||||||||||||||||  ||| ||||||||| | |||||||| ||| || |||||||||    
T  2377040 caaattcgtttttgaattttcaaaaattgaccaaattcgtccctgaattttgcaaaaaatatatttagtc 2377109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 285
Target Start/End: Original strand, 30598546 - 30598599
Alignment:
Q  232 attgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 285  Q
    |||||||| |||||||||||||| || ||||||||| |||| ||||||||||||    
T  30598546 attgatttacagaaaattgtcaatgaccaaattgatggattttcagaaaattgc 30598599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 46112498 - 46112567
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||||| |||||||||| |||||||  || |||||||  || |||||||| ||||||||||||||||    
T  46112498 caaattcgtccttgaattttaaaaaatcggccaaattcgttattgaattttgcaaaatatctatttagtc 46112567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 2378804 - 2378764
Alignment:
Q  214 ttgccaaggatcaaattaattgattttcagaaaattgtcaa 254  Q
    ||||||||||||||||| || ||||||||||||||||||||    
T  2378804 ttgccaaggatcaaattgatggattttcagaaaattgtcaa 2378764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 23291771 - 23291831
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 285  Q
    |||||| ||| |||| |||||||||||| |||| ||||||||| |||| ||||||||||||    
T  23291771 caaattgattaatttacagaaaattgtcgaggaccaaattgatggattttcagaaaattgc 23291831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 43765148 - 43765216
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagt 69  Q
    ||||||||| ||||||||||||||||||   | ||||||| |   ||||||||||||||||||||||||    
T  43765148 caaattcgtccttgaattttcaaaaatcggtcaaattcgttccggaattttgcgaaatatctatttagt 43765216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 35905835 - 35905776
Alignment:
Q  11 cttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    |||||||||| |||||||   | ||||||||| | |||||||||||||||||||||||||    
T  35905835 cttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtc 35905776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 2378460 - 2378410
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    ||||||||||||||| ||| |||| ||||||||||||||||| || |||||    
T  2378460 ttcaagctctatgtaaaataatgaggtgagagagcttcaatgttggtgtcc 2378410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 43766568 - 43766518
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||| ||||||||  ||||||| || |||||    
T  43766568 ttcaagctctatgtacaatgatgaggtgagagaagttcaatgttggtgtcc 43766518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 44274915 - 44274965
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    ||||| |||||||||||||||||| |||||| |||||||||| || |||||    
T  44274915 ttcaatctctatgtacaatgatgaggtgagaaagcttcaatgttggtgtcc 44274965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 353
Target Start/End: Complemental strand, 24846093 - 24846052
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatg 353  Q
    |||||||||||||||||||| |||| |||||| |||||||||    
T  24846093 ttcaagctctatgtacaatggtgatatgagagtgcttcaatg 24846052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 353
Target Start/End: Original strand, 30598907 - 30598947
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatg 353  Q
    |||||||||||||||||||||||| |||||||| ||||||||    
T  30598907 ttcaagctctatgtacaatgatgaggtgagaga-cttcaatg 30598947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 30600051 - 30599982
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||||| ||| |||||| | |||||  || |||| |||| | |||||||||||||||||||||||||    
T  30600051 caaattcgtccttaaatttttacaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtc 30599982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 42279518 - 42279587
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    |||||||||  |||||||||||||||||| |  ||||||||    |||||||| ||||||||||||||||    
T  42279518 caaattcgtcattgaattttcaaaaatcagctcaattcgtctcagaattttgcaaaatatctatttagtc 42279587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 353
Target Start/End: Complemental strand, 46199166 - 46199125
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatg 353  Q
    |||||||||||| ||||||||||| || ||||||||||||||    
T  46199166 ttcaagctctatatacaatgatgaggtaagagagcttcaatg 46199125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 2378870 - 2378810
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 285  Q
    |||||| ||||||||  ||||||||| ||| || ||||||||| |||| ||||||||||||    
T  2378870 caaattgattgatttaaagaaaattgccaatgaccaaattgatggattttcagaaaattgc 2378810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 21350492 - 21350432
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 285  Q
    |||||| |||||||| |||||||||| |||| | |||||||||  ||| ||||||||||||    
T  21350492 caaattgattgatttacagaaaattgccaagaaccaaattgatgaattttcagaaaattgc 21350432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 214; Significance: 1e-117; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 353
Target Start/End: Original strand, 19581425 - 19581778
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| ||| |||||| |||||||| || |||| |||| | ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||    
T  19581425 caaattcgtccttaaatttttaaaaatcagccaaatttgtccctgaattttgcgaaatatctatttagtcctcgaatttaccaaatgtccatcaaatcag 19581524  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagcatg-accaaattgat 199  Q
    |   ||||||||||| || |||||||||||||||| |||| | ||||| |||||||||||||||||||||| |||||| ||||||| | |||||||||||    
T  19581525 tctttccgttaagtttgtatgttaacggaggtgacatgtactattaacttcttacaaggcttaccacgtcaaatgtcacgcaagcagggaccaaattgat 19581624  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaaaatttccaacga 299  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||| |||||| ||||||| ||||||||||||||||||  |||||     
T  19581625 tgatttacagaaaattgccaaggaccaaattgattgattttcagaaaattgccaaggaccaaatttattgattttcagaaaattgcaaaattcacaacgg 19581724  T
Q  300 ctctttctccttttcaagctctatgtacaatgatgatgtgagagagcttcaatg 353  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19581725 ctctttctcctcttcaagctctatgtacaatgatgatgtgagagagcttcaatg 19581778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 2 - 254
Target Start/End: Original strand, 19906694 - 19906947
Alignment:
Q  2 aaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagt 101  Q
    |||||||| |||||||||| |||||||   | ||||||||| | |||||||||||||||||||||||||    ||||||||||||||  |||||||||||    
T  19906694 aaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtcccataatttacaaaatgtcaatcaaatcagt 19906793  T
Q  102 acctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgatt 200  Q
     |||||||||||||||||||||||| |||||||||||||  |||||||||||||| |||||||||||||| ||| || |||| ||  |||||||||||||    
T  19906794 ccctccgttaagttggtctgttaaccgaggtgacgtgtaacgttaacctcttacatggcttaccacgtcagatgccacgcaaacagggaccaaattgatt 19906893  T
Q  201 gatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaa 254  Q
    |||||||| |||||||||||||| |||||| || ||||||||||||||||||||    
T  19906894 gatttacataaaattgccaaggaccaaattgatggattttcagaaaattgtcaa 19906947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 16376747 - 16377001
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    |||||||||  ||||||||| |||||||   | ||||||||| | |||||| ||||||| ||||||||||   ||||||||||||| |  ||||||||||    
T  16376747 caaattcgtctttgaattttaaaaaatcggtcaaattcgtccctgaattttacgaaatagctatttagtccctgaatttacaaaatatcaatcaaatcag 16376846  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | |||||||||||||||||| ||||| ||||| || | ||  |||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||    
T  16376847 tccctccgttaagttggtctattaacagaggtaacatttaacgttaacctcttacaaggcttaccacgtcatatgtcacgcaagcagggaccaaattgat 16376946  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaa 254  Q
    ||||||||||||||||| |||||| |||||| || ||||||||||||||||||||    
T  16376947 tgatttacagaaaattgtcaaggaccaaattgatggattttcagaaaattgtcaa 16377001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 2 - 250
Target Start/End: Original strand, 39663166 - 39663413
Alignment:
Q  2 aaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagt 101  Q
    |||||||| |||||||||| |||||||   | ||||||||| | |||||||| ||||| ||||||||||   |||||||||||||||  |||||||||||    
T  39663166 aaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaatttacaaaatgtcaatcaaatcagt 39663265  T
Q  102 acctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgatt 200  Q
     ||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||| |||||| |||||||  || ||||||||||    
T  39663266 ccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacatggcttaccacgtcagatgtcacgcaagcagggatcaaattgatt 39663365  T
Q  201 gatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    |||||||  | |||||||||||| |||||| || |||||||| |||||||    
T  39663366 gatttac--ataattgccaaggaccaaattgatggattttcataaaattg 39663413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 34 - 250
Target Start/End: Complemental strand, 39456825 - 39456608
Alignment:
Q  34 aattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtg 133  Q
    ||||||||| | |||||||| ||||| ||||||||||   ||||||| |||||||  ||||||||||| | |||||||||||||||||||||||||||||    
T  39456825 aattcgtccatgaattttgcaaaatagctatttagtccctgaatttataaaatgtcaatcaaatcagtccatccgttaagttggtctgttaacggaggtg 39456726  T
Q  134 acgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattgatttacagaaaattgccaaggatcaaattaa 232  Q
    |||||||   ||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||| ||||||||| ||||||  ||||| |    
T  39456725 acgtgtaacattaacctcttacaaggcttaccacgtcatatgtcacgcaagcagggaccaaattgattgatttatagaaaattgtcaaggactaaattga 39456626  T
Q  233 ttgattttcagaaaattg 250  Q
    | ||||||||||||||||    
T  39456625 tggattttcagaaaattg 39456608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 47 - 250
Target Start/End: Original strand, 42517614 - 42517818
Alignment:
Q  47 attttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgtta 146  Q
    ||||| ||||||| |||||| ||| | |||||||||||||||  ||||||||||| ||| ||||||||||||||||||||||||||||||||||  ||||    
T  42517614 attttacgaaatagctattttgtccttgaatttacaaaatgtcaatcaaatcagtcccttcgttaagttggtctgttaacggaggtgacgtgtaacgtta 42517713  T
Q  147 acctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaa 245  Q
    ||||| ||||||||||||||||||| ||| || |||||||  ||||||||||||||||||||||||||||| |||||| |||||| || |||||||||||    
T  42517714 acctcatacaaggcttaccacgtcagatgccacgcaagcagggaccaaattgattgatttacagaaaattgtcaaggagcaaattgatggattttcagaa 42517813  T
Q  246 aattg 250  Q
    |||||    
T  42517814 aattg 42517818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 6799486 - 6799231
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttca-tcaaatca 99  Q
    ||||||||| |||||||||| |||||||   | ||||||||| | |||||||| ||||| |||||| ||| | ||||||| ||||| |||| ||||||||    
T  6799486 caaattcgtccttgaatttttaaaaatcggacaaattcgtccatgaattttgccaaatagctattttgtccttgaatttataaaattttcaatcaaatca 6799387  T
Q  100 gtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattga 198  Q
    || |||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||| || ||| || ||||| |  |||||| ||||    
T  6799386 gtccctccgttaagttggtctgttaacggtggtgacgtgtaacgttaacctcttacaaggcttaccacgccagatgccacgcaagtagggaccaagttga 6799287  T
Q  199 ttgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaa 254  Q
    |||||||| |||||||||||||||| |||||| || |||||||| |||||||||||    
T  6799286 ttgatttagagaaaattgccaaggaccaaattgatggattttcaaaaaattgtcaa 6799231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 34400325 - 34400573
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||| | ||||||||||||||||||  || ||||| ||| | |||||||||||||| |||||| ||| | ||||||||||||| |  |||||||| |    
T  34400325 caaattcatccttgaattttcaaaaatcggccaaattcatccctgaattttgcgaaatagctattttgtccttgaatttacaaaatatcaatcaaatcgg 34400424  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagcatgaccaaattgatt 200  Q
    | ||||||||||||||||||||||||||||||||  |||| |||| |||||||||||| |||||||||||| |||||| ||      |||||||||||||    
T  34400425 tccctccgttaagttggtctgttaacggaggtgatatgtaatgttgacctcttacaagacttaccacgtcagatgtcacgc-----cgaccaaattgatt 34400519  T
Q  201 gatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaa 254  Q
    ||||||||||||| || |||||| |||||| || | ||||||||||||||||||    
T  34400520 gatttacagaaaaatgtcaaggaccaaattgatggtttttcagaaaattgtcaa 34400573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 16764689 - 16764406
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| | |||||  || | ||||||| | |||||||||||||||| | ||||||   |||||||||||||||  |||||| |||    
T  16764689 caaattcgtccttgaattttgagaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaaccag 16764590  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||||||||||||| ||||||||||||||||||||||||  |||||||||| |||| |||||||| |||| |||||| |||||||  ||||||| ||||    
T  16764589 tccctccgttaagtt-gtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccatgtcagatgtcacgcaagcagagaccaaactgat 16764491  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||||||| |||||| ||||||| |||||| || ||||| || ||||||   ||||| ||||||||| |||| |||||||||||    
T  16764490 tgatttacacaaaatttccaaggaccaaattgatggatttacacaaaatttctaaggaccaaattgatggattttcagaaaattg 16764406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 11 - 282
Target Start/End: Original strand, 24205619 - 24205891
Alignment:
Q  11 cttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgtt 110  Q
    |||||||||| |||||||  || | ||||||| | |||||| ||||||||| | ||||||   |||||||||||||||  ||||||| ||| ||||||||    
T  24205619 cttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgtt 24205718  T
Q  111 aagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattgatttacag 209  Q
     ||||||||||||||||||||||||||||   |||||||||| |||| ||||||||||||| ||| ||||||||||  ||||||| |||||||||||||     
T  24205719 cagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccatgcaagcagggaccaaactgattgatttacac 24205818  T
Q  210 aaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaat 282  Q
    |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||    
T  24205819 aaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaat 24205891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 40561956 - 40561706
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    |||||||||  ||||||||| |||||||  || | ||||||  | ||||||| |||||| | | ||||||   |||||||||||||||  |||||||| |    
T  40561956 caaattcgtctttgaattttgaaaaatcggccaatttcgtctctgaattttgtgaaatagcaaattagtccctgaatttacaaaatgtcaatcaaatcgg 40561857  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | |||||||||||||||| |||||||||||||||||||||  |||||||||| |||| ||||||||||||| ||| || |||||||  ||||||||||||    
T  40561856 tccctccgttaagttggtttgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaattgat 40561757  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    ||||||||| || ||| ||||||| |||||| || ||||||||||||||||    
T  40561756 tgatttacacaacatttccaaggaccaaattgatggattttcagaaaattg 40561706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 5 - 186
Target Start/End: Complemental strand, 37646552 - 37646371
Alignment:
Q  5 ttcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacc 104  Q
    |||||||||||| ||||||||||||  | |||||||||| ||||| ||||||||||||||||||||   |||||| |||||||   ||||||||||| ||    
T  37646552 ttcgttcttgaactttcaaaaatcagtcaaattcgtcctcaaattctgcgaaatatctatttagtccctgaattttcaaaatgccaatcaaatcagtccc 37646453  T
Q  105 tccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca 186  Q
    || |||||||||| ||||||||||| ||||| |||| |||||||| ||||||||||||||||||||| |||||| |||||||    
T  37646452 tctgttaagttggcctgttaacggacgtgacatgtactgttaaccgcttacaaggcttaccacgtcagatgtcacgcaagca 37646371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 14387360 - 14387644
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||  || | ||||||| | |||||| ||||||||| | ||||||   |||||||||||||||  ||||||| ||    
T  14387360 caaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaataag 14387459  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | |||||||||| || | ||||||| | ||||||||||||  |||||||||| |||| ||||||||||||| ||| || |||||||  ||||||| ||||    
T  14387460 tccctccgttaaattagactgttaaagaaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgat 14387559  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||||||| |||||| ||||||| |||||| || |||||    ||||||  |||||| ||||||||| |||| |||||||||||    
T  14387560 tgatttacacaaaatttccaaggaccaaattgatggatttaggcaaaatttccaaggaccaaattgatggattttcagaaaattg 14387644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 11 - 284
Target Start/End: Complemental strand, 2577548 - 2577275
Alignment:
Q  11 cttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgtt 110  Q
    |||||||||| |||||||  || | ||||||| | ||||||  |||||||| | ||||||   |||||||||||||||  ||||||| ||| ||||||||    
T  2577548 cttgaattttgaaaaatcgtccaatttcgtccctgaattttttgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgtt 2577449  T
Q  111 aagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattgatttacag 209  Q
    || ||||||||||||| ||||||||||||   |||||||||| |||| ||||||||||||| |||||| |||||||  ||||||| | |||||||||||     
T  2577448 aatttggtctgttaacagaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgtcacgcaagcagggaccaaactaattgatttacac 2577349  T
Q  210 aaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  2577348 aaaatttcgaaggacgaaattgatggatttacacaaaatt-ccaaggaccaaattgatggattttcagaaaattg 2577275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 48 - 254
Target Start/End: Complemental strand, 17698140 - 17697933
Alignment:
Q  48 ttttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaa 147  Q
    |||| ||||||| |||||| ||| | |||||||||||||||  |||||||||||  ||||||||||||| | | |||||||||||||||||||  |||||    
T  17698140 ttttccgaaatagctattttgtccttgaatttacaaaatgtcaatcaaatcagtctctccgttaagttgatatattaacggaggtgacgtgtaacgttaa 17698041  T
Q  148 cctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaa 246  Q
     |||||| ||| |||||||||| | |||||| |||||||  ||||||||| |||  ||||| |||||||| |||||| |||||| || ||||||||||||    
T  17698040 tctcttaaaagacttaccacgttagatgtcacgcaagcagggaccaaattaattagtttactgaaaattgtcaaggaccaaattgatggattttcagaaa 17697941  T
Q  247 attgtcaa 254  Q
    ||||||||    
T  17697940 attgtcaa 17697933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 11 - 283
Target Start/End: Complemental strand, 37022253 - 37021981
Alignment:
Q  11 cttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgtt 110  Q
    |||||||||| ||||||| ||| | ||||||| | |||||| ||||||||| | ||||||   |||||||||||||||  ||||||| ||| ||||||||    
T  37022253 cttgaattttgaaaaatcgaccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgtt 37022154  T
Q  111 aagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattgatttacag 209  Q
    || |||||| ||||||||| |||||||||   |||||||||| |||| ||||||||||||| ||| || |||||||  ||||||| |||||||||||||     
T  37022153 aatttggtccgttaacggaagtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgacacgcaagcagggaccaaactgattgatttacac 37022054  T
Q  210 aaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaatt 283  Q
    ||||||   |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| ||| ||||||    
T  37022053 aaaattttgaaggacgaaattgatggatttacacaaaatt-ccaaggaccaaattgatggattttcacaaaatt 37021981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 5 - 189
Target Start/End: Complemental strand, 31475154 - 31474969
Alignment:
Q  5 ttcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaa-tgttcatcaaatcagtac 103  Q
    ||||||||| |||||||||||||||  | ||||||||   |||||||| |||||||||||||| ||   |||||| ||||| |||  |||||||| || |    
T  31475154 ttcgttctttaattttcaaaaatcagtcaaattcgtcaccaaattttgagaaatatctatttaatccctgaattttcaaaaatgtcaatcaaatcggtcc 31475055  T
Q  104 ctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagcatga 189  Q
    ||| |||||||||   ||||||||||||||||||||| |||||||| ||||||| ||||||||||||| |||||| ||||||||||    
T  31475054 ctctgttaagttgacatgttaacggaggtgacgtgtactgttaaccgcttacaatgcttaccacgtcagatgtcacgcaagcatga 31474969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 74 - 208
Target Start/End: Original strand, 6783448 - 6783583
Alignment:
Q  74 gaatttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcata 173  Q
    |||||||||||||||  ||||||| | | |||||||||||||||||||||||||||||||||||||   |||||||||| |||| ||||||||||||| |    
T  6783448 gaatttacaaaatgtcaatcaaattattccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcaga 6783547  T
Q  174 tgtcatgcaagca-tgaccaaattgattgatttaca 208  Q
    ||||| |||||||  ||||||| |||||||||||||    
T  6783548 tgtcacgcaagcagggaccaaactgattgatttaca 6783583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 10 - 186
Target Start/End: Complemental strand, 162144 - 161968
Alignment:
Q  10 tcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgt 109  Q
    ||||||||||||||||||||  | |||||| ||  ||||||| | |||||||||||||||  | |||||| ||||| ||  ||||||||  | | |||||    
T  162144 tcttgaattttcaaaaatcagtcaaattcgaccccaaattttacaaaatatctatttagttcttgaattttcaaaacgtcaatcaaatcgatccatccgt 162045  T
Q  110 taagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca 186  Q
    ||||||||||| |||||||||||||| ||||  ||||||| |||||||| |||||||||||| |||||| |||||||    
T  162044 taagttggtctattaacggaggtgacatgtaccgttaaccgcttacaagacttaccacgtcagatgtcacgcaagca 161968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 14389217 - 14389122
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaa 96  Q
    |||||||||  |||||||||||||||||  || ||||||||| | |||||||||||||||||||||||||   |||||| | |||||| |||||||    
T  14389217 caaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttccaaatgtccatcaaa 14389122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 6783935 - 6783985
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||    
T  6783935 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgttggtgtcc 6783985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 37645502 - 37645576
Alignment:
Q  5 ttcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaattt 79  Q
    ||||| |||||||||| ||||||||  ||||||||||||||||||||  ||||||||||||||||| | ||||||    
T  37645502 ttcgtccttgaatttttaaaaatcagtcgaattcgtccttaaattttaggaaatatctatttagtccttgaattt 37645576  T

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Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 312 - 353
Target Start/End: Original strand, 24206180 - 24206221
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatg 353  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  24206180 ttcaagctctatgtacaatgatgatgtgagagagcttcaatg 24206221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 40560234 - 40560303
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    |||||||||  ||||||||| |||||||| || ||||||||| | |||||||||||||||||||||||||    
T  40560234 caaattcgtctttgaattttaaaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagtc 40560303  T

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Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 42517759 - 42517819
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 285  Q
    |||||| |||||||| ||||||||||||||||| ||||||||| |||| ||||||||||||    
T  42517759 caaattgattgatttacagaaaattgtcaaggagcaaattgatggattttcagaaaattgc 42517819  T

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Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 284
Target Start/End: Original strand, 16376938 - 16376997
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    |||||| |||||||| ||||||||||||||||| ||||||||| |||| |||||||||||    
T  16376938 caaattgattgatttacagaaaattgtcaaggaccaaattgatggattttcagaaaattg 16376997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 2768360 - 2768310
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||| ||||||||||||||||| || |||||    
T  2768360 ttcaagctctatgtacaatgatgaggtgagagagcttcaatgttggtgtcc 2768310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 17697653 - 17697603
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||| ||||||||||||||||| || |||||    
T  17697653 ttcaagctctatgtacaatgatgaggtgagagagcttcaatgttggtgtcc 17697603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 37021664 - 37021614
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||||||| ||||||||||||| || |||||    
T  37021664 ttcaagctctatgtacaatgatgatgtgggagagcttcaatgttggtgtcc 37021614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 316 - 362
Target Start/End: Complemental strand, 40561392 - 40561346
Alignment:
Q  316 agctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||||||||||||||||| || |||||    
T  40561392 agctctatgtacaatgatgatgtgagagagcttcaatgttggtgtcc 40561346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 2766945 - 2767014
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||||| |||||||||| |||||||   | || |||||||| |||||||||||||||||||||||||    
T  2766945 caaattcgtccttgaatttttaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtc 2767014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 16763087 - 16763156
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||||| |||||||||| |||||||   | ||||||||| | |||||||||||||||||||||||||    
T  16763087 caaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtc 16763156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 353
Target Start/End: Original strand, 34400880 - 34400921
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatg 353  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  34400880 ttcaagctctatgtacaatgatgaggtgagagagcttcaatg 34400921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 39663712 - 39663762
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||| ||||| ||||||||||||||||| || |||||    
T  39663712 ttcaagctctatgtacaacgatgaggtgagagagcttcaatgttggtgtcc 39663762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 42518127 - 42518177
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||| |||||||||||| |||| || |||||    
T  42518127 ttcaagctctatgtacaatgatgaggtgagagagctttaatgttggtgtcc 42518177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 192 - 249
Target Start/End: Original strand, 6783592 - 6783649
Alignment:
Q  192 aaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaatt 249  Q
    |||||||| |||||||| |||||| ||||||| |||||| || |||||||||||||||    
T  6783592 aaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaatt 6783649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 17696217 - 17696286
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||||| ||||||||||||||||||  || ||||| ||| | |||||||  ||||||||||||||||    
T  17696217 caaattcgtccttgaattttcaaaaatcggccaaattcatccctgaattttggaaaatatctatttagtc 17696286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 39664881 - 39664812
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||||| |||||||||| |||||||  || |||||||||   |||||| ||||||||||||||||||    
T  39664881 caaattcgtccttgaattttaaaaaatcggccaaattcgtccccgaattttacgaaatatctatttagtc 39664812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 39456667 - 39456607
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 285  Q
    |||||| ||||||||  ||||||||||||||||  |||||||| |||| ||||||||||||    
T  39456667 caaattgattgatttatagaaaattgtcaaggactaaattgatggattttcagaaaattgc 39456607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 315 - 362
Target Start/End: Complemental strand, 6798949 - 6798902
Alignment:
Q  315 aagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    ||||||| ||||||||||||| ||||||||||||||||| || |||||    
T  6798949 aagctctgtgtacaatgatgaggtgagagagcttcaatgttggtgtcc 6798902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 284
Target Start/End: Complemental strand, 17697996 - 17697937
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||||||||  ||| | ||||||||||||||| ||||||||| |||| |||||||||||    
T  17697996 caaattaattagtttactgaaaattgtcaaggaccaaattgatggattttcagaaaattg 17697937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 284
Target Start/End: Original strand, 19906884 - 19906943
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    |||||| |||||||| || ||||||| |||||| ||||||||| |||| |||||||||||    
T  19906884 caaattgattgatttacataaaattgccaaggaccaaattgatggattttcagaaaattg 19906943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 19908380 - 19908301
Alignment:
Q  1 caaattcgttcttgaattttcaaaaa-tcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaattt 79  Q
    ||||||||| |||||||||| ||||| ||  || |||| |||| | ||||||||||||||||||||||||| | ||||||    
T  19908380 caaattcgtccttgaattttaaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattt 19908301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 284
Target Start/End: Original strand, 34400510 - 34400569
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    |||||| |||||||| ||||||| ||||||||| ||||||||| | || |||||||||||    
T  34400510 caaattgattgatttacagaaaaatgtcaaggaccaaattgatggtttttcagaaaattg 34400569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 298
Target Start/End: Complemental strand, 31474939 - 31474893
Alignment:
Q  252 caaggaacaaattgattgattatcagaaaattgcaaaatttccaacg 298  Q
    |||||| ||||||||||||||  ||||||||||||||||| ||||||    
T  31474939 caaggaccaaattgattgatttacagaaaattgcaaaattcccaacg 31474893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 217
Target Start/End: Complemental strand, 161931 - 161902
Alignment:
Q  188 gaccaaattgattgatttacagaaaattgc 217  Q
    ||||||||||||||||||||||||||||||    
T  161931 gaccaaattgattgatttacagaaaattgc 161902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 217
Target Start/End: Complemental strand, 31474935 - 31474906
Alignment:
Q  188 gaccaaattgattgatttacagaaaattgc 217  Q
    ||||||||||||||||||||||||||||||    
T  31474935 gaccaaattgattgatttacagaaaattgc 31474906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 37646346 - 37646293
Alignment:
Q  244 aaaattgtcaaggaacaaattgattgattatcagaaaattgcaaaatttccaac 297  Q
    |||||| |||||||  |||||||||||||  ||||||||||||||||| |||||    
T  37646346 aaaattatcaaggacaaaattgattgatttacagaaaattgcaaaattcccaac 37646293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 44709878 - 44709809
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||||| |||||||||| ||||| |  || |||||| || | |||||||||||||| ||||||||||    
T  44709878 caaattcgtccttgaattttaaaaaaccggccaaattcggccctgaattttgcgaaataactatttagtc 44709809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 183; Significance: 6e-99; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 26238737 - 26238987
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| ||||||||||||||||||| || ||||||||| | ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  26238737 caaattcgtccttgaattttcaaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagtcctcgaatttacaaaatgtccatcaaatcag 26238836  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagcat-gaccaaattgat 199  Q
    | ||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||    
T  26238837 tccctccgttaagttagtctgttaacggaggtgatgtgtactgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcatggaccaaattgat 26238936  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  26238937 tgatttacagaaaattgccaaggaccaaattgattgattttcagaaaattg 26238987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 2 - 285
Target Start/End: Original strand, 41823902 - 41824186
Alignment:
Q  2 aaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagt 101  Q
    |||||||| ||||||||||||||||||| |  | ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  41823902 aaattcgtccttgaattttcaaaaatcagctaatttcgtccttgaattttgcgaaatatctatttagtcctcgaatttacaaaatgttcatcaaatcagt 41824001  T
Q  102 acctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgatt 200  Q
     |||||||||||||||||| |||||||||||||| ||||  |||||||||||||| |||||||||||||| | | || |||| ||  |||||||||||||    
T  41824002 ccctccgttaagttggtctattaacggaggtgacttgtacagttaacctcttacatggcttaccacgtcagaagccacgcaaacagggaccaaattgatt 41824101  T
Q  201 gatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 285  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||| ||  ||||| |||||||||||||  |||||| |||||    
T  41824102 gatttacataaaattgccaaggatcaaattgattgattttcagaaaagtgcaaaggaccaaattgattgatattcagaatattgc 41824186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 42943504 - 42943250
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||  || ||||||||| | |||||||||||||||||||||||||   |||||||||||||||  ||||||||||    
T  42943504 caaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtcaatcaaatcag 42943405  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||| |||||||  ||||||||||||    
T  42943404 tccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcagggaccaaattgat 42943305  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaa 254  Q
    |||||||||||||||||||||||| |||||| || |||||| |||||||||||||    
T  42943304 tgatttacagaaaattgccaaggaccaaattgatggatttttagaaaattgtcaa 42943250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 75 - 308
Target Start/End: Original strand, 3152042 - 3152276
Alignment:
Q  75 aatttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatat 174  Q
    ||||||||||||||  ||||||| ||| |||| ||||||||||| ||||||  || ||||| |||| |||||||||||||||||| ||||||||||| ||    
T  3152042 aatttacaaaatgtcaatcaaattagtccctctgttaagttggtatgttaatagatgtgacatgtaatgttaacctcttacaaggtttaccacgtcagat 3152141  T
Q  175 gtcatgcaagcatg-accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgatta 273  Q
    |||| ||||||| | |||||||||||||||||||||||||||||||| ||  ||||| |||||||||||||||||| ||||||| ||||||||||||||     
T  3152142 gtcacgcaagcagggaccaaattgattgatttacagaaaattgccaatgactaaattgattgattttcagaaaattatcaaggaccaaattgattgattt 3152241  T
Q  274 tcagaaaattgcaaaatttccaacgactctttctc 308  Q
    |||||||||||||||||| ||||||||||||||||    
T  3152242 tcagaaaattgcaaaattcccaacgactctttctc 3152276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 22273969 - 22273719
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    |||||| || |||||||||| |||||||  || |||| |||  | |||||||| ||||||||||||||||   |||||||||||||||  ||||||||||    
T  22273969 caaatttgtccttgaattttaaaaaatcggccaaatttgtctctgaattttgcaaaatatctatttagtccctgaatttacaaaatgtcaatcaaatcag 22273870  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||  ||||||  ||||||||||||    
T  22273869 tccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggcttaccacgtcagatgtcacacaagcagggaccaaattgat 22273770  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    |||||||||||||||||||||||| |||||| || |||||| |||||||||    
T  22273769 tgatttacagaaaattgccaaggaccaaattgatggatttttagaaaattg 22273719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 5038139 - 5037893
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||   | ||||||| ||| |||||||||||||| ||||||||||   |||||||||||||||  ||||||||||    
T  5038139 caaattcgt-cttgaattttaaaaaatcggtcaaattcgttcttgaattttgcgaaatagctatttagtccctgaatttacaaaatgtcaatcaaatcag 5038041  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagcat-gaccaaattgat 199  Q
    | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| || ||||  || ||||||||||||    
T  5038040 tccctccgttaagttggtctgttaacggaggtgacgtgtaatgttaacctcttacaaggcttaccacgtcagatgccacgcaa--atggaccaaattgat 5037943  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaatt 249  Q
    |||||||||||||||||| ||||| ||  || || |||||||||||||||    
T  5037942 tgatttacagaaaattgctaaggaccagcttgatggattttcagaaaatt 5037893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 13284073 - 13283823
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||  || | || |||| | |||||||||||||||| | ||||||   |||||||||||||||  ||||||||||    
T  13284073 caaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccatgaatttacaaaatgtcaatcaaatcag 13283974  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||||| ||||||| |||||| |||||||  ||||||| ||||    
T  13283973 tccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttatcacgtcagatgtcacgcaagcagggaccaaactgat 13283874  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    ||||||||| |||||| ||||||| |||||| || ||||||||||||||||    
T  13283873 tgatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 13283823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 27692915 - 27692631
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||  || | ||||||| | |||||||| ||||||| | ||||||   |||||||||||||||  || |||||||    
T  27692915 caaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaattagtccctgaatttacaaaatgtcaattaaatcag 27692816  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||||||||||| | ||| || |||||||  ||||||| ||||    
T  27692815 tccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtaagatgccacgcaagcagggaccaaactgat 27692716  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||||||| |||||| ||||||| |||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  27692715 tgatttacacaaaatttccaaggaccaaattgatggatttacacaaaatttccaaggaccaaattgatagattttcagaaaattg 27692631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 43262215 - 43261967
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| ||| ||||||||||||||| |  |||||| || ||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||    
T  43262215 caaattcgtccttaaattttcaaaaatcagctaaattcgaccctaaattttgcgaaatatctatttagtcctcgaatttacaaaatgtcaatcaaatcag 43262116  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    |  ||||||||||||||||||||||||  |||||| | ||  ||||||||||||||| ||||||||||||  |||||| |||||||  ||||||||||||    
T  43262115 tctctccgttaagttggtctgttaacg--ggtgacatctaccgttaacctcttacaaagcttaccacgtctgatgtcacgcaagcagggaccaaattgat 43262018  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    |||||| |||||||||  ||| || |||||| ||||||||| | |||||||    
T  43262017 tgattttcagaaaattttcaaagaccaaattgattgattttaaaaaaattg 43261967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 29239265 - 29238981
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||  || | ||||||| |||||||| ||||||||| | ||||||   ||||||||||||| |  ||||||| ||    
T  29239265 caaattcgtccttgaattttgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaatttacaaaatatcaatcaaattag 29239166  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | |||||||||||||||||||||||||||||||||||||   |||||||||| |||| ||||||||||||| |||||| |||||||  ||||||| ||||    
T  29239165 tccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgtcacgcaagcagggaccaaactgat 29239066  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  29239065 tgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 29238981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 33761080 - 33761364
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    |||||||||  ||||||||| |||||||| || | ||||||| | |||||||||||||||| | ||||||   |||||||||||||||  ||||||||||    
T  33761080 caaattcgtctttgaattttgaaaaatcagccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcag 33761179  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | |||||||||||||||||||||||||||||||||||||   |||||||||| |||| ||||||||||||| ||| || ||||| |  ||||||| ||||    
T  33761180 tccctccgttaagttggtctgttaacggaggtgacgtgttacgttaacctctgacaaagcttaccacgtcagatgccacgcaagtagggaccaaactgat 33761279  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  33761280 tgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 33761364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 38548909 - 38548659
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||  || | ||||||| | |||||||||||||||| | ||| ||   ||||||||||||| |  ||||||||||    
T  38548909 caaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaatttacaaaatttcaatcaaatcag 38548810  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||||||||||||| ||| || |||||||  ||||||| ||||    
T  38548809 tccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgat 38548710  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    ||||||||| ||||||  |||||| |||||| || ||||||||||||||||    
T  38548709 tgatttacacaaaattttcaaggaccaaattgatggattttcagaaaattg 38548659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 35510897 - 35510613
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||   | | ||||||||| ||||||| |||||||| | ||||||   |||||||||||||||  ||||||||||    
T  35510897 caaattcgtccttgaattttgaaaaatcggtcaatttcgtccttgaattttgtgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcag 35510798  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||||||||||||||||||||||||||||||||||| |   |||||||||| |||| ||||| ||||||| |||||| |||||||  ||||||| ||||    
T  35510797 tccctccgttaagttggtctgttaacggaggtgacgtatcacgttaacctctgacaaagcttaacacgtcagatgtcacgcaagcagggaccaaactgat 35510698  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  35510697 tgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 35510613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 2 - 250
Target Start/End: Original strand, 8608249 - 8608499
Alignment:
Q  2 aaattcgttcttgaattttcaaaaatcaaccgaattcgtcctt-aaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    |||||||| |||||||||| |||||||   | | ||||||| | ||||||||||||||||| | ||||||   ||||||| |||||||  ||||||||||    
T  8608249 aaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaaattttgcgaaatatcaaattagtccctgaatttataaaatgtcaatcaaatcag 8608348  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||||||||||||| |||  | |||||||  ||||||| ||||    
T  8608349 tccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgcaacgcaagcagggaccaaactgat 8608448  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    ||||||||| |||||| ||||||| |||||| || ||||||||||||||||    
T  8608449 tgatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 8608499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 2 - 250
Target Start/End: Original strand, 13106816 - 13107065
Alignment:
Q  2 aaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagt 101  Q
    |||||||| |||||||||| |||||||  || | ||| ||| | |||||||||||||||| | ||||||   ||||||| ||||| |  ||||||| |||    
T  13106816 aaattcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaatttataaaatttcaatcaaattagt 13106915  T
Q  102 acctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgatt 200  Q
     ||||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||||||||||||| ||| || |||||||  ||||||| |||||    
T  13106916 ccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgatt 13107015  T
Q  201 gatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    |||||||| |||||| ||||||| |||||| || ||||||||||||||||    
T  13107016 gatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 13107065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 601782 - 601498
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||  || | ||||||| | |||||| ||||||||| | ||||||   |||||||||||||||  ||||||| ||    
T  601782 caaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattag 601683  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||||||||||||||||||||||||||||||||||| |   |||||||||| |||| ||||||||||||| ||  || |||||||  ||||||| ||||    
T  601682 tccctccgttaagttggtctgttaacggaggtgacgtttcacgttaacctctgacaaagcttaccacgtcaaataccacgcaagcagggaccaaactgat 601583  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    |||||||||||||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  601582 tgatttacagaaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 601498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 33707217 - 33707467
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||   | | ||||||| | |||||| ||||||||| | ||||||   ||||||| |||||||  ||||||||||    
T  33707217 caaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttataaaatgtcaatcaaatcag 33707316  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    |  |||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||||||||||||| |||||| |||||||  ||||||| ||||    
T  33707317 tcactccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgtcaagcaagcagggaccaaactgat 33707416  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    ||||||||| ||||||  |||||| |||||| || |||||||| |||||||    
T  33707417 tgatttacacaaaattttcaaggaccaaattgatggattttcataaaattg 33707467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 46 - 250
Target Start/End: Original strand, 41040776 - 41040982
Alignment:
Q  46 aattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgtt 145  Q
    |||||| | ||||| |||||| ||| | |||||||||||||||  |||||||| || |||||||||||||||||||||||| |||||||||||||  |||    
T  41040776 aattttccaaaatagctattttgtccttgaatttacaaaatgtcaatcaaatcggtccctccgttaagttggtctgttaacagaggtgacgtgtaacgtt 41040875  T
Q  146 aacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattga-tttacagaaaattgccaaggatcaaattaattgattttcag 243  Q
     |||||||||||| |||||||||||| |||||| |||||||  ||||||||||||||| |||| ||||||||| |||||| |||||| || |||||||||    
T  41040876 gacctcttacaagacttaccacgtcagatgtcacgcaagcagggaccaaattgattgattttagagaaaattgtcaaggagcaaattgatggattttcag 41040975  T
Q  244 aaaattg 250  Q
    |||||||    
T  41040976 aaaattg 41040982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 29237162 - 29237446
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||   | | ||||||| | |||||| ||||||||| | ||||||   |||||||||||||||  ||||||| ||    
T  29237162 caaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattag 29237261  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagc-atgaccaaattgat 199  Q
    | ||||| |||||||||||||||||||||||||||||||   |||||||||| |||| ||||||||||||| ||| || |||||| | ||||||| ||||    
T  29237262 tccctccattaagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcaaggaccaaactgat 29237361  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||  ||||||||| |||| |||||||||||    
T  29237362 tgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaagggtcaaattgatggattttcagaaaattg 29237446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 33762791 - 33762511
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||  || | ||||||| | |||||| ||||||||| | ||||||   |||||||||||||||  |||||||||     
T  33762791 caaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcaa 33762692  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | |||||||||||||||||||||||||||||||||||||   ||||||||    ||| ||||||||||||| |||||| |||||||  ||||||| ||||    
T  33762691 tccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacct----caaagcttaccacgtcagatgtcacgcaagcagggaccaaactgat 33762596  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||| ||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  33762595 tgattcacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 33762511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 35509225 - 35509509
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    |||||| || |||||||||| |||||||   | | ||||||| | |||||||||||||||| | ||||||   |||||||||||||||  ||||||||||    
T  35509225 caaattagtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcag 35509324  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | | ||||||||||||  ||||||||| |||||||||||   |||||||||| |||| ||||||||||||| ||| || |||||||  ||||||| ||||    
T  35509325 tccatccgttaagttgacctgttaacgaaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgat 35509424  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  35509425 tgatttacaaaaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 35509509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 13484556 - 13484771
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    |||||||||  |||||||||||||||||  || ||||||||| | |||||||||||||   ||||| ||| | |||||||||||||||  ||||||||||    
T  13484556 caaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaattgttattttgtccttgaatttacaaaatgtcaatcaaatcag 13484655  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||||| |||||||||||| |||||| |||||||||| |  |||||||| |||||||||||||||||||| ||| ||  ||||||  ||||||||||||    
T  13484656 tccctccattaagttggtctattaacgaaggtgacgtg-aacgttaaccttttacaaggcttaccacgtcagatgccacacaagcagggaccaaattgat 13484754  T
Q  200 tgatttacagaaaattg 216  Q
     ||||| ||||||||||    
T  13484755 ggattttcagaaaattg 13484771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 11 - 283
Target Start/End: Complemental strand, 15308329 - 15308056
Alignment:
Q  11 cttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgtt 110  Q
    |||||||||| |||||||  || | ||||||| | |||| | ||||||||| | ||||||   |||||||||||||||  ||||||| ||  ||||||||    
T  15308329 cttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagcccctccgtt 15308230  T
Q  111 aagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattgatttacag 209  Q
    |||||||||||||||||||||||||||||   |||||||||| |||| ||||||||||||| ||| || |||||||  ||||||||||||||||||| |     
T  15308229 aagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaattgattgatttatac 15308130  T
Q  210 aaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaatt 283  Q
    ||||||   |||||  ||||  || |||||  | ||||||  |||||| ||||||||| |||| ||||||||||    
T  15308129 aaaattttgaaggacgaaatcgatggatttaaacaaaatttccaaggaccaaattgatggattttcagaaaatt 15308056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 11 - 283
Target Start/End: Complemental strand, 15488698 - 15488425
Alignment:
Q  11 cttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgtt 110  Q
    |||||||||| |||||||  || | ||||||| | |||| | ||||||||| | ||||||   |||||||||||||||  ||||||| ||  ||||||||    
T  15488698 cttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagcccctccgtt 15488599  T
Q  111 aagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattgatttacag 209  Q
    |||||||||||||||||||||||||||||   |||||||||| |||| ||||||||||||| ||| || |||||||  ||||||||||||||||||| |     
T  15488598 aagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaattgattgatttatac 15488499  T
Q  210 aaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaatt 283  Q
    ||||||   |||||  ||||  || |||||  | ||||||  |||||| ||||||||| |||| ||||||||||    
T  15488498 aaaattttgaaggacgaaatcgatggatttaaacaaaatttccaaggaccaaattgatggattttcagaaaatt 15488425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 34 - 188
Target Start/End: Original strand, 17807063 - 17807217
Alignment:
Q  34 aattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtg 133  Q
    |||||||||| ||||||||| |||||| |||||||||  ||||||||||||| ||  |||||| |||  ||||| ||||||||| |||||||||||||||    
T  17807063 aattcgtcctcaaattttgcaaaatatttatttagtccccgaatttacaaaacgtcaatcaaaccagaccctccattaagttggcctgttaacggaggtg 17807162  T
Q  134 acgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagcatg 188  Q
    || |||| ||||||||||||||||||||||| | |||| |||||| | |||||||    
T  17807163 acatgtactgttaacctcttacaaggcttacgatgtcagatgtcacgtaagcatg 17807217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 75 - 283
Target Start/End: Original strand, 27404295 - 27404504
Alignment:
Q  75 aatttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatat 174  Q
    |||||| |||||||  ||||||| ||| ||| |||||||||||||||||||||||||||||||||   |||||||||| |||| || |||||||||| ||    
T  27404295 aatttataaaatgtcaatcaaattagtcccttcgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcgtaccacgtcagat 27404394  T
Q  175 gtcatgcaagca-tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgatta 273  Q
    |||| |||||||  ||||||| ||||||||||||| |||||| | || ||  ||||| ||  |||| || ||||||  |||||| ||||||||| ||||     
T  27404395 gtcacgcaagcagggaccaaactgattgatttacacaaaatttcgaatgactaaattgatgaatttacacaaaatttccaaggaccaaattgatggattt 27404494  T
Q  274 tcagaaaatt 283  Q
    ||||||||||    
T  27404495 tcagaaaatt 27404504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 147
Target Start/End: Original strand, 15562446 - 15562580
Alignment:
Q  12 ttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgtta 111  Q
    ||||||||| ||||||||  | |||||||||||||||||||  ||||||| |||||||   |||||||| |||||||  ||||||||||| |||||||||    
T  15562446 ttgaatttttaaaaatcagtcaaattcgtccttaaattttgtaaaatatcaatttagttc-cgaatttataaaatgtcaatcaaatcagtccctccgtta 15562544  T
Q  112 agttggtctgttaacggaggtgacgtgtattgttaa 147  Q
    |||||||||||||||||||||||| |||| ||||||    
T  15562545 agttggtctgttaacggaggtgacatgtactgttaa 15562580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 310
Target Start/End: Original strand, 26238928 - 26239013
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaaaatttccaacgactctttctcct 310  Q
    |||||| |||||||| |||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  26238928 caaattgattgatttacagaaaattgccaaggaccaaattgattgattttcagaaaattgcaaaatttccaacgactctttctcct 26239013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 191 - 310
Target Start/End: Original strand, 41824126 - 41824245
Alignment:
Q  191 caaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaaaat 290  Q
    ||||||||||||||| ||||||| ||| ||||| |||||| |||||| ||||||| |||| ||| || |||||||||||||| |||||||||||||||||    
T  41824126 caaattgattgattttcagaaaagtgcaaaggaccaaattgattgatattcagaatattgccaatgatcaaattgattgattttcagaaaattgcaaaat 41824225  T
Q  291 ttccaacgactctttctcct 310  Q
    | || ||| |||||||||||    
T  41824226 taccgacggctctttctcct 41824245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 186
Target Start/End: Complemental strand, 29694391 - 29694210
Alignment:
Q  5 ttcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacc 104  Q
    ||||| ||| ||||||||||||| | |  ||||| || |||| |||||| |||||||||||||||  |  |||||  ||||| |  ||||||||||| ||    
T  29694391 ttcgtccttaaattttcaaaaataagctaaattcatctttaatttttgcaaaatatctatttagttcttaaatttttaaaatatcaatcaaatcagttcc 29694292  T
Q  105 tccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca 186  Q
    || |||||||| | |||||||||||||||| ||||| | |||||| ||||||||| ||||||||||||||| || |||||||    
T  29694291 tctgttaagttagcctgttaacggaggtgatgtgtactattaaccgcttacaaggtttaccacgtcatatgccacgcaagca 29694210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 26242443 - 26242378
Alignment:
Q  5 ttcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||    
T  26242443 ttcgttcttgaattttcaaaaatcagccaaattcgtccctaaattttgcgaaatatctatttagtc 26242378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 9671989 - 9672096
Alignment:
Q  2 aaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagt 101  Q
    |||||||| ||||||||||||  |||||| | ||||||||| | |||||||||||||||||||||||||  |||||||||||||| |  |||||||| ||    
T  9671989 aaattcgtccttgaattttcaccaatcaatcaaattcgtccatgaattttgcgaaatatctatttagtccccgaatttacaaaatttcaatcaaatcggt 9672088  T
Q  102 acctccgt 109  Q
     |||||||    
T  9672089 tcctccgt 9672096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 41825777 - 41825708
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||||| ||||||||||||||||||||   ||||||||||| |||||||||||||||||||||||||    
T  41825777 caaattcgtccttgaattttcaaaaatcaaataaattcgtccttgaattttgcgaaatatctatttagtc 41825708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 8609920 - 8609851
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    |||||||||||||||||||| |||||||  || ||||||||| | |||||||||||||||||||||||||    
T  8609920 caaattcgttcttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtc 8609851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 34681144 - 34681075
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||||| ||||||||||||||||||  || ||||||||| | |||||||||||||||||||||||||    
T  34681144 caaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtc 34681075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 13107375 - 13107425
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||    
T  13107375 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgttggtgtcc 13107425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 13283513 - 13283463
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||    
T  13283513 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgttggtgtcc 13283463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 15307769 - 15307719
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||    
T  15307769 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgttggtgtcc 15307719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 15488138 - 15488088
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||    
T  15488138 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgttggtgtcc 15488088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 26239280 - 26239330
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||    
T  26239280 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgttggtgtcc 26239330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 27404791 - 27404841
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||    
T  27404791 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgttggtgtcc 27404841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 29238671 - 29238621
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||    
T  29238671 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgttggtgtcc 29238621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 38548349 - 38548299
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||    
T  38548349 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgttggtgtcc 38548299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 41824157 - 41824219
Alignment:
Q  188 gaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    |||||||||||||||| | ||||| |||||||| ||||||||| |||||||||||||||||||    
T  41824157 gaccaaattgattgatattcagaatattgccaatgatcaaattgattgattttcagaaaattg 41824219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 13282489 - 13282558
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||||| |||||||||| |||||||  || ||||||||| | |||||||||||||||||||||||||    
T  13282489 caaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtc 13282558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 350
Target Start/End: Original strand, 8608809 - 8608847
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttca 350  Q
    |||||||||||||||||||||||||||||||||||||||    
T  8608809 ttcaagctctatgtacaatgatgatgtgagagagcttca 8608847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 22273419 - 22273369
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||| ||||||||||||||||| || |||||    
T  22273419 ttcaagctctatgtacaatgatgaggtgagagagcttcaatgttggtgtcc 22273369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 7745245 - 7745176
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    |||||||||  |||||||||||||||||| || ||||||||  | ||||||||||||||| |||||||||    
T  7745245 caaattcgtctttgaattttcaaaaatcagccaaattcgtctctgaattttgcgaaatatttatttagtc 7745176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 288
Target Start/End: Original strand, 41824092 - 41824155
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaaa 288  Q
    |||||| |||||||| || ||||||| |||||| |||||||||||||| |||||||| ||||||    
T  41824092 caaattgattgatttacataaaattgccaaggatcaaattgattgattttcagaaaagtgcaaa 41824155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 41041282 - 41041332
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||| ||||||||||||||| ||||||||||||||||| || |||||    
T  41041282 ttcaagctttatgtacaatgatgaggtgagagagcttcaatgttggtgtcc 41041332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 41824510 - 41824560
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||| ||||||||||||||||||||| ||||||| || |||||    
T  41824510 ttcaagctctatctacaatgatgatgtgagagagtttcaatgttggtgtcc 41824560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 42942946 - 42942896
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    ||||||||||||||||||| |||| ||||||||||||||||| || |||||    
T  42942946 ttcaagctctatgtacaataatgaggtgagagagcttcaatgttggtgtcc 42942896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 41040922 - 41040983
Alignment:
Q  225 caaattaattgattttc-agaaaattgtcaaggaacaaattgattgattatcagaaaattgc 285  Q
    |||||| |||||||||  |||||||||||||||| ||||||||| |||| ||||||||||||    
T  41040922 caaattgattgattttagagaaaattgtcaaggagcaaattgatggattttcagaaaattgc 41040983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 43262026 - 43261966
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 285  Q
    |||||| |||||||||||||||||| |||| || |||||||||||||| | | ||||||||    
T  43262026 caaattgattgattttcagaaaattttcaaagaccaaattgattgattttaaaaaaattgc 43261966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 5036456 - 5036534
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaattt 79  Q
    ||||||||| ||| |||||| |||||||   | ||||||||| | ||||||| ||||||||||||||||| | ||||||    
T  5036456 caaattcgtccttaaattttaaaaaatccgtcaaattcgtccctgaattttgtgaaatatctatttagtccttgaattt 5036534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 40338370 - 40338420
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    ||||||||||||||||||||||||  |||||||| ||||||| || |||||    
T  40338370 ttcaagctctatgtacaatgatgagctgagagagtttcaatgttggtgtcc 40338420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 217
Target Start/End: Original strand, 15562646 - 15562675
Alignment:
Q  188 gaccaaattgattgatttacagaaaattgc 217  Q
    ||||||||||||||||||||||||||||||    
T  15562646 gaccaaattgattgatttacagaaaattgc 15562675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 27691165 - 27691234
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||||| |||||||||| |||||||  || | ||||||| | |||||||||||||||| | ||||||    
T  27691165 caaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtc 27691234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 348
Target Start/End: Complemental strand, 29693849 - 29693813
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagctt 348  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  29693849 ttcaagctctatgtacaatggtgatgtgagagtgctt 29693813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 38548711 - 38548659
Alignment:
Q  232 attgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    |||||||| || |||||| ||||||| ||||||||| |||| |||||||||||    
T  38548711 attgatttacacaaaattttcaaggaccaaattgatggattttcagaaaattg 38548659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 171; Significance: 9e-92; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 52641899 - 52642209
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| ||||||||||||||||||| || ||||||||| | ||||||||||||||| ||||||||| || ||||||||||||||||||||||||||    
T  52641899 caaattcgtccttgaattttcaaaaatcagccaaattcgtccctgaattttgcgaaatatatatttagtcctcaaatttacaaaatgttcatcaaatcag 52641998  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | |||||||||||||||| | |||||||||||||| ||||  |||||| ||||||||  |||||||||||| ||| ||  ||||||  ||||||||||||    
T  52641999 tccctccgttaagttggtatattaacggaggtgacatgtaccgttaacttcttacaaaacttaccacgtcagatgccacacaagcagggaccaaattgat 52642098  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaaaatttccaacga 299  Q
    |||||| ||||||||| | || || |||||| ||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||| |    
T  52642099 tgattttcagaaaatttctaatgaccaaattgattgattttcagaaaattgccaaggaacagattgattgattttcagaaaattgcaaaatttccaacaa 52642198  T
Q  300 ctctttctcct 310  Q
    | |||||||||    
T  52642199 cactttctcct 52642209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 2871154 - 2870904
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||  |  ||||||||| | |||||||||||||| |||||| ||| | |||||||||||||||  ||||||||||    
T  2871154 caaattcgtccttgaatttttaaaaatcggctaaattcgtccctgaattttgcgaaatagctattttgtctttgaatttacaaaatgtcaatcaaatcag 2871055  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | |||||||||||||| |||||||||||| ||||||||||  ||||||||||||||||||||||||||||| ||| ||  ||||||  ||||||||||||    
T  2871054 tccctccgttaagttgctctgttaacggaagtgacgtgtaacgttaacctcttacaaggcttaccacgtcagatgccacacaagcagggaccaaattgat 2870955  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    |||||| ||||||||||||||||| |||||| || |||||||| |||||||    
T  2870954 tgatttgcagaaaattgccaaggaccaaattgatggattttcataaaattg 2870904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 37346040 - 37345756
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| ||||||| ||| | ||| ||| | |||||||||||||||| | ||||||   |||||||||||||||  ||||||||||    
T  37346040 caaattcgtccttgaattttgaaaaatcgaccaatttcatccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcag 37345941  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | |||||||||||||||||| ||||||||||||||||||| ||||||||||| |||| ||||||||||||| ||| || |||||||  ||||||| ||||    
T  37345940 tccctccgttaagttggtctattaacggaggtgacgtgtaatgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgat 37345841  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||| ||||| |||||| ||||||| |||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  37345840 tgacttacacaaaatttccaaggaccaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 37345756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 3011866 - 3012116
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| ||| |||||| ||||||||  | ||||||| | | |||||||||||||||||||||||||   |||||||||||||||  ||||||||||    
T  3011866 caaattcgtccttaaattttaaaaaatcagtcaaattcgttcctgaattttgcgaaatatctatttagtctctgaatttacaaaatgtcaatcaaatcag 3011965  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | | |||||||||||||||| ||||||||| |||||||||  ||||||||||||||||||||| ||||||| ||  || |||||||  ||||||||||||    
T  3011966 tccatccgttaagttggtctattaacggagatgacgtgtaacgttaacctcttacaaggcttatcacgtcagataccacgcaagcagagaccaaattgat 3012065  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    |||||||||||||||||| ||||| |||||| || ||||||||||||||||    
T  3012066 tgatttacagaaaattgctaaggaccaaattgatggattttcagaaaattg 3012116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 31236830 - 31237079
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||   | |||| |||| | ||||||||||||||||||||||||    ||||||||||||| |  ||||||||||    
T  31236830 caaattcgtccttgaattttaaaaaatcggtcaaatttgtccctgaattttgcgaaatatctatttagttcctgaatttacaaaatatcaatcaaatcag 31236929  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||||||||||||||||||||||| ||||||||||||||  ||||||| ||||||||||||||||||||| ||  || |||||||  ||||||||||||    
T  31236930 tccctccgttaagttggtctgttaatggaggtgacgtgtaacgttaaccgcttacaaggcttaccacgtcagataccacgcaagcagagaccaaattgat 31237029  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaatt 249  Q
    ||||||||| ||||||| |||||| ||||||||| |||||||||||||||    
T  31237030 tgatttacataaaattgtcaaggaccaaattaatggattttcagaaaatt 31237079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 50554174 - 50554428
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||   | ||||||||| | |||||||  ||||| |||||||||    |||||| ||||||||  ||||||||||    
T  50554174 caaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgtaaaatagctatttagttcctgaatttgcaaaatgtcaatcaaatcag 50554273  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||| |||||||||||||||||||||| |||||||||||  |||||||||||||| |||||||||||||| |||||||||||  |  ||||||||||||    
T  50554274 tcccttcgttaagttggtctgttaacgggggtgacgtgtaacgttaacctcttacatggcttaccacgtcaaatgtcatgcaataagggaccaaattgat 50554373  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaa 254  Q
    ||||||||| |||||||||||||| |||||| || ||||||||||||||||||||    
T  50554374 tgatttacacaaaattgccaaggaccaaattgatggattttcagaaaattgtcaa 50554428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 51894578 - 51894828
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    |||||||||||||||||||| ||||||    | |||| |||  | ||||||||||||||| |||||||||   |||||||||||||||  ||||||||||    
T  51894578 caaattcgttcttgaattttaaaaaatgggtcaaatttgtctctgaattttgcgaaatatatatttagtccctgaatttacaaaatgtcaatcaaatcag 51894677  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | |||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||| ||| ||| || || ||||  ||||||||||||    
T  51894678 tccctccgttaagttggtctgttaacggaggtgacgtgtaatgttaaactcttacaagacttaccacatcagatgccacgccagcagggaccaaattgat 51894777  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    ||||||||||||||||| ||| || |||||| || ||||||||||||||||    
T  51894778 tgatttacagaaaattgtcaacgaccaaattgatggattttcagaaaattg 51894828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 33599229 - 33599479
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||   | ||||||||| | |||||||||||||||| | ||| ||   |||||||||||||||  ||||||||||    
T  33599229 caaattcgtccttgaattttgaaaaatcggtcaaattcgtccatgaattttgcgaaatatcaaattaatctctgaatttacaaaatgtcaatcaaatcag 33599328  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||||| ||||||||||||||||||||||||||||||||   ||||||||||||||  |||||||||||||||| || |||||||  ||||||| ||||    
T  33599329 tccctccattaagttggtctgttaacggaggtgacgtgtaactttaacctcttacaaaacttaccacgtcatatgccacgcaagcagggaccaaactgat 33599428  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    ||||||||| |||||| ||||||| |||||| || ||||||||||||||||    
T  33599429 tgatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 33599479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 272
Target Start/End: Original strand, 25276753 - 25277025
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||  || | ||| ||||| |||||||||||||||| | ||||||   |||||||||||||||  ||||||||||    
T  25276753 caaattcgtccttgaattttgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcag 25276852  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | |||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||| ||| || ||||| |  ||||||| ||||    
T  25276853 tccctccgttaagttggtctgttaacggaggtgacgtgtaatgttaacctctgacaaagcttaccacgtcagatgccacgcaagtagggaccaaactgat 25276952  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgatt 272  Q
    ||||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| ||||    
T  25276953 tgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggatt 25277025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 26223598 - 26223882
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||   | | ||||||| | |||||||||||||||| | ||||||   |||||||||||||||  ||||||| ||    
T  26223598 caaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattag 26223697  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||||| ||||||||||||||||||||||||||||||||  |||||||||| |||| ||||||||||||| ||| || |||||||  ||||||| ||||    
T  26223698 tccctccattaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgat 26223797  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||||| | |||||| ||||||| |||||| || ||||| || |||||| |||| || ||||||||| |||| |||||||||||    
T  26223798 tgatttaaacaaaatttccaaggaccaaattgatggatttacacaaaattttcaacgaccaaattgatggattttcagaaaattg 26223882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 8167953 - 8168236
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||  || | ||||||  | |||||||||||||||| | ||||||   |||| ||||||||||  ||||||||||    
T  8167953 caaattcgtccttgaattttgaaaaatcggccaatttcgtctctgaattttgcgaaatatcaaattagtccctgaatgtacaaaatgtcaatcaaatcag 8168052  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagcatgaccaaattgatt 200  Q
    | |||||||||||||||||||||||||||||||||||||   |||||||||| |||| ||||||||||||| ||| || ||||| | ||||||| |||||    
T  8168053 tccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagtaggaccaaactgatt 8168152  T
Q  201 gatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    |||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  8168153 gatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 8168236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 74 - 249
Target Start/End: Original strand, 45045004 - 45045180
Alignment:
Q  74 gaatttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcata 173  Q
    |||||||||||||||  ||||||| |||  |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |    
T  45045004 gaatttacaaaatgtcaatcaaattagtctctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggcttaccacgtcaga 45045103  T
Q  174 tgtcatgcaagca-tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaatt 249  Q
    || || |||||||  |||||||||||||||||||||||||||||||||| | |||||| || |||||||||||||||    
T  45045104 tgccacgcaagcagggaccaaattgattgatttacagaaaattgccaagaaccaaattgatggattttcagaaaatt 45045180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 8169646 - 8169362
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||  || | ||||||| | |||||| | ||||||| | ||||||   |||||||||||||||  |||||||||     
T  8169646 caaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacaaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcaa 8169547  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | |||||||||||||||||||||||||||||||||||||   |||||||||| |||| ||||||||||||| |||||| |||||||  ||||||| ||||    
T  8169546 tccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctaacaaagcttaccacgtcagatgtcacgcaagcagggaccaaactgat 8169447  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||| ||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  8169446 tgattcacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 8169362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 27089357 - 27089073
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||  |  | ||||||||| ||||||| |||||||| | ||| ||   |||||||||||||||  ||||||||||    
T  27089357 caaattcgtccttgaattttgaaaaatcggcaaatttcgtccttgaattttgtgaaatatcaaattaatccctgaatttacaaaatgtcaatcaaatcag 27089258  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagcatg-accaaattgat 199  Q
    | | |||||||||||||| |||||||||||||||||||||  |||||||||| |||| ||||||||||| | ||| || ||||||| | |||||| ||||    
T  27089257 tccttccgttaagttggtttgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgttagatgccacgcaagcaggaaccaaactgat 27089158  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||||||| |||||| |||| || |||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  27089157 tgatttacacaaaatttccaatgaccaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 27089073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 4854421 - 4854671
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||   | | ||||||| | |||||||||||| ||| | ||||||   ||||||||||||| |  ||||||||||    
T  4854421 caaattcgtccttgaattttgaaaaatcgttcaatttcgtccctgaattttgcgaaagatcaaattagtccctgaatttacaaaatttcaatcaaatcag 4854520  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    |  ||||||||||||||||||||||||||||||| |||||  |||||||||| |||| ||||||||||||||||| || |||||||  ||||||| ||||    
T  4854521 tcactccgttaagttggtctgttaacggaggtgatgtgtaacgttaacctctgacaaagcttaccacgtcatatgccacgcaagcagggaccaaactgat 4854620  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    ||||||||| |||||| ||||||| |||||| ||  |||||||||||||||    
T  4854621 tgatttacacaaaatttccaaggaccaaattgatgtattttcagaaaattg 4854671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 34776580 - 34776830
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||  || | ||||||| | |||||| ||||||||| | ||||||   ||||||||||||| |  |||| |||||    
T  34776580 caaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttacaaaatttcaatcagatcag 34776679  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||||| ||||||| |||  | |||||||  ||||||| ||||    
T  34776680 tccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaacacgtcagatgaaacgcaagcagggaccaaactgat 34776779  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    ||||||||| |||||| ||||||| |||||| || ||||||||||||||||    
T  34776780 tgatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 34776830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 37088214 - 37087960
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||| | |||||||||| |||||||  || ||||||| | | |||||||||||||| |||||| ||| |  ||||||||||||||  ||||||||||    
T  37088214 caaattcttccttgaattttaaaaaatcggccaaattcgttcctgaattttgcgaaatagctattttgtccttaaatttacaaaatgtcaatcaaatcag 37088115  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | |||||||||||||||| ||||||||| | |||||||||  |||||||||||||||| ||||||| |||| ||| ||  |||| |  ||||||||||||    
T  37088114 tccctccgttaagttggtttgttaacggtgatgacgtgtaaagttaacctcttacaagacttaccaagtcagatgccacacaagtagggaccaaattgat 37088015  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaa 254  Q
    ||||||| ||||||||| |||||  |||||| ||||||||| |||||||||||||    
T  37088014 tgatttagagaaaattgtcaagggccaaattgattgatttttagaaaattgtcaa 37087960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 46582021 - 46582271
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    |||||| || |||||||||| |||||||  || | ||||||| | |||||||||||||||| | ||||||   |||||||||||||||  ||||||||||    
T  46582021 caaatttgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcag 46582120  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||||||||||||| ||| || |||||||  ||||||| ||||    
T  46582121 tccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaaatgat 46582220  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
     |||||||| ||||||  |||| | |||||| || |||||||| |||||||    
T  46582221 agatttacacaaaattttcaagaaccaaattgatggattttcataaaattg 46582271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 11 - 284
Target Start/End: Original strand, 47011477 - 47011750
Alignment:
Q  11 cttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgtt 110  Q
    |||||||||| |||||||   | | ||||||| | |||||| ||||||||| | ||||||   |||||||||||| ||  ||||| ||||| ||||||||    
T  47011477 cttgaattttgaaaaatcggacaatttcgtccatgaatttttcgaaatatcaaattagtccctgaatttacaaaaagtcaatcaactcagtccctccgtt 47011576  T
Q  111 aagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattgatttacag 209  Q
    || |||| |||||||||||||||||||||   |||||||||| |||| ||||||||||||| ||| || |||||||  ||||||| |||||||||||||     
T  47011577 aatttggcctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacac 47011676  T
Q  210 aaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  47011677 aaaatttcgaaggacgaaattgatggatttacacaaaatt-ccaaggatcaaattgatggattttcagaaaattg 47011750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 74 - 284
Target Start/End: Complemental strand, 1444186 - 1443976
Alignment:
Q  74 gaatttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcata 173  Q
    |||||||||||||||  ||||||| ||| |||||||||| ||||||||||||||||||||||||||   |||||||||| |||| ||||||||||||| |    
T  1444186 gaatttacaaaatgtcaatcaaattagtccctccgttaatttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcaga 1444087  T
Q  174 tgtcatgcaagca-tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgatt 272  Q
    || || |||||||  ||||||| ||||||||||||| ||||||   |||||  ||||| || ||||| || ||||||  |||||| ||||||||| ||||    
T  1444086 tgccacgcaagcagggaccaaactgattgatttacacaaaattttgaaggacgaaattgatggatttacacaaaatt-ccaaggaccaaattgatggatt 1443988  T
Q  273 atcagaaaattg 284  Q
     |||||||||||    
T  1443987 ttcagaaaattg 1443976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 11 - 284
Target Start/End: Original strand, 9120060 - 9120333
Alignment:
Q  11 cttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgtt 110  Q
    |||||||||| |||||||   | | ||||||| | |||||| ||||||||| | ||||||   |||||||||||||||  ||||||| ||| ||||||||    
T  9120060 cttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgtt 9120159  T
Q  111 aagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattgatttacag 209  Q
    || |||||| |||||||| ||||||||||   |||||||||| |||| ||||||||||||| ||| || |||||||  ||||||| |||||||||||||     
T  9120160 aatttggtccgttaacgggggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgacacgcaagcagggaccaaactgattgatttacac 9120259  T
Q  210 aaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||||   |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  9120260 aaaattttgaaggacgaaattgatggatttacacaaaatt-ccaaggaccaaattgatggattttcagaaaattg 9120333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 81 - 250
Target Start/End: Original strand, 6816928 - 6817106
Alignment:
Q  81 caaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatg 180  Q
    ||||||||  ||||||||||| ||||| ||||||||||||||||||||||||||| ||||  ||||||||||||||||| ||||||||||| ||| || |    
T  6816928 caaaatgtcaatcaaatcagtccctccattaagttggtctgttaacggaggtgacatgtaacgttaacctcttacaagggttaccacgtcagatgccacg 6817027  T
Q  181 caagc-atgaccaaattgattgatttacagaaa--------attgccaaggatcaaattaattgattttcagaaaattg 250  Q
    ||| | | |||||||||||| ||||| ||||||         |||||||||| |||||| || ||||||||||||||||    
T  6817028 caaacaaggaccaaattgatagattttcagaaattaccaacgttgccaaggaccaaattgatggattttcagaaaattg 6817106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 23577682 - 23577817
Alignment:
Q  36 ttcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgac 135  Q
    |||| |||| |||||||||||||||| | |||||||  |||||| ||||||||  | ||||||||| | |||||||| |||| |||||||||||||||||    
T  23577682 ttcgaccttcaattttgcgaaatatcaaattagtcaatgaatttgcaaaatgtcaaccaaatcagtccgtccgttaaattggcctgttaacggaggtgac 23577781  T
Q  136 gtgtattgttaacctcttacaaggcttaccacgtca 171  Q
    ||||   |||||||||| |||| |||||||||||||    
T  23577782 gtgtcacgttaacctctgacaaagcttaccacgtca 23577817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 25279066 - 25278997
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||||| ||||||||||||||||||| || ||||||| | |||||||||||||||||||||||||||    
T  25279066 caaattcgtccttgaattttcaaaaatcagccaaattcgttcctaaattttgcgaaatatctatttagtc 25278997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 3369441 - 3369602
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    |||| |||| ||||||||| |||  | || || |||||||||| ||||||| | |||| |||||||  ||   |||||||| | ||||  |||||||  |    
T  3369441 caaaatcgtccttgaatttgcaaggaccagccaaattcgtcctcaaatttttcaaaatgtctatttcatctatgaatttaccacatgtcaatcaaattcg 3369540  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggctt 162  Q
    |  |||||||||||||| ||||||||||||||||| ||||||||| |||||| |||||||||    
T  3369541 tcactccgttaagttggcctgttaacggaggtgacatgtattgtttacctctcacaaggctt 3369602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 1443676 - 1443626
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||    
T  1443676 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgttggtgtcc 1443626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 4854968 - 4855018
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||    
T  4854968 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgttggtgtcc 4855018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 9120650 - 9120700
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||    
T  9120650 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgttggtgtcc 9120700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 34777139 - 34777189
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||    
T  34777139 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgttggtgtcc 34777189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 47012050 - 47012100
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||    
T  47012050 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgttggtgtcc 47012100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 52642474 - 52642524
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||    
T  52642474 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgttggtgtcc 52642524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 2869590 - 2869659
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||||| ||||||||||||||||||   | ||||||||| | |||||||||||||||||||||||||    
T  2869590 caaattcgtccttgaattttcaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtc 2869659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 284
Target Start/End: Original strand, 25276979 - 25277071
Alignment:
Q  192 aaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    |||||||| |||||||| |||||| ||||||| |||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  25276979 aaattgatggatttacacaaaatttccaaggaccaaattgatggatttacataaaatttccaaggaccaaattgatggattttcagaaaattg 25277071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 25278865 - 25278936
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcat 72  Q
    ||||||| | |||||||||||||||||||  | |||| |||| | |||||||||||||||||||||||||||    
T  25278865 caaattcatccttgaattttcaaaaatcagtcaaatttgtccctgaattttgcgaaatatctatttagtcat 25278936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 25277009 - 25277071
Alignment:
Q  188 gaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    |||||||||||| |||||||| |||||| ||||||| |||||| || ||||||||||||||||    
T  25277009 gaccaaattgatggatttacataaaatttccaaggaccaaattgatggattttcagaaaattg 25277071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 316 - 362
Target Start/End: Original strand, 26224196 - 26224242
Alignment:
Q  316 agctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||||||||||||||||| || |||||    
T  26224196 agctctatgtacaatgatgatgtgagagagcttcaatgttggtgtcc 26224242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 27088763 - 27088713
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||| ||||||||||||||||||||||||||| || |||||    
T  27088763 ttcaagctctatgttcaatgatgatgtgagagagcttcaatgttggtgtcc 27088713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 33599790 - 33599840
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    ||||| |||||||||||||||||||||||||||||||||||| || |||||    
T  33599790 ttcaaactctatgtacaatgatgatgtgagagagcttcaatgttggtgtcc 33599840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 3013589 - 3013520
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||||| |||||||||| ||| ||||  | ||||||||| | |||||||||||||||||||||||||    
T  3013589 caaattcgtccttgaattttaaaacatcagtcaaattcgtccatgaattttgcgaaatatctatttagtc 3013520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 51894769 - 51894829
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 285  Q
    |||||| |||||||| |||||||||||||| || ||||||||| |||| ||||||||||||    
T  51894769 caaattgattgatttacagaaaattgtcaacgaccaaattgatggattttcagaaaattgc 51894829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 3012425 - 3012475
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    ||||||||||||||||| |||||| ||||||||||||||||| || |||||    
T  3012425 ttcaagctctatgtacagtgatgaggtgagagagcttcaatgttggtgtcc 3012475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 15105870 - 15105820
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    ||||||| ||||||||||||| |||||||||||||||||||| || |||||    
T  15105870 ttcaagccctatgtacaatgaagatgtgagagagcttcaatgttggtgtcc 15105820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 25278481 - 25278403
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaattt 79  Q
    ||||||||| |||||||||| |||||||   | ||||||||| | |||||||||||||| |||||||||| | ||||||    
T  25278481 caaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtccttgaattt 25278403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 31237389 - 31237439
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||| | ||||||||||||||||| || |||||    
T  31237389 ttcaagctctatgtacaatgataaggtgagagagcttcaatgttgctgtcc 31237439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 37087656 - 37087606
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || |||||    
T  37087656 ttcaagctctgtgtacaatgatgaggtgagagagcttcaatgttggtgtcc 37087606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 37344353 - 37344431
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaattt 79  Q
    ||||||||| |||||||||| |||||||   | ||||||||| | |||||||||||||| |||||||||| | ||||||    
T  37344353 caaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtctttgaattt 37344431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 50554750 - 50554800
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||  ||||||||||||||||| || |||||    
T  50554750 ttcaagctctatgtacaatgatgtggtgagagagcttcaatgttggtgtcc 50554800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 283
Target Start/End: Complemental strand, 20945010 - 20944885
Alignment:
Q  159 gcttaccacgtcatatgtcatgcaagcatg-accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaagga 257  Q
    ||||||||||||| ||| || ||||||| | | |||| ||||||||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||| |    
T  20945010 gcttaccacgtcagatgccacgcaagcagggatcaaactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaagaa 20944911  T
Q  258 acaaattgattgattatcagaaaatt 283  Q
     ||||||||| |||| ||||||||||    
T  20944910 ccaaattgatggattttcagaaaatt 20944885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 31238608 - 31238539
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    |||||| || |||||||||| |||||||  || |||| |||| | |||||||||||||||||||||||||    
T  31238608 caaatttgtccttgaattttaaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtc 31238539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 50556210 - 50556141
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    |||||||||  ||||||||| ||||||||  | ||||||||  | |||||||||||||||||||||||||    
T  50556210 caaattcgtctttgaattttaaaaaatcagtcaaattcgtctctgaattttgcgaaatatctatttagtc 50556141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 3012057 - 3012117
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 285  Q
    |||||| |||||||| ||||||||||  ||||| ||||||||| |||| ||||||||||||    
T  3012057 caaattgattgatttacagaaaattgctaaggaccaaattgatggattttcagaaaattgc 3012117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 284
Target Start/End: Complemental strand, 37088023 - 37087964
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    |||||| ||||||||  |||||||||||||||  |||||||||||||| | |||||||||    
T  37088023 caaattgattgatttagagaaaattgtcaagggccaaattgattgatttttagaaaattg 37087964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 284
Target Start/End: Original strand, 50554365 - 50554424
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    |||||| |||||||| || ||||||| |||||| ||||||||| |||| |||||||||||    
T  50554365 caaattgattgatttacacaaaattgccaaggaccaaattgatggattttcagaaaattg 50554424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 31237021 - 31237079
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaatt 283  Q
    |||||| |||||||| || |||||||||||||| |||||| || |||| ||||||||||    
T  31237021 caaattgattgatttacataaaattgtcaaggaccaaattaatggattttcagaaaatt 31237079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 4856079 - 4856010
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||||| |||||||||| |||||||  || ||| ||||| | |||||||||||||||| | ||||||    
T  4856079 caaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtc 4856010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 27087294 - 27087363
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||||| ||| |||||| |||||||   | |||| |||| | |||||||||||||||||||||||||    
T  27087294 caaattcgtccttaaattttaaaaaatcggtcaaatttgtccctgaattttgcgaaatatctatttagtc 27087363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 34778251 - 34778182
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||||| |||||||||| |||||||  || ||| ||||| | |||||||||||||||| | ||||||    
T  34778251 caaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtc 34778182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 51896265 - 51896196
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||| ||| ||| |||||| ||||||||  | |||| |||| | |||||||||||||||||||||||||    
T  51896265 caaatccgtccttaaattttaaaaaatcagtcaaatttgtccctgaattttgcgaaatatctatttagtc 51896196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 52643728 - 52643659
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||||| ||| |||||| ||||||||    ||||||||| | ||||||||||||||| |||||||||    
T  52643728 caaattcgtccttaaatttttaaaaatcagttaaattcgtccctgaattttgcgaaatatttatttagtc 52643659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 15106165 - 15106133
Alignment:
Q  278 aaaattgcaaaatttccaacgactctttctcct 310  Q
    ||||||||||||||||||||| |||||||||||    
T  15106165 aaaattgcaaaatttccaacggctctttctcct 15106133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 159; Significance: 1e-84; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 47384305 - 47384567
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||| | || ||||||||||| |||||||||||||||||| ||||||  ||||||||||||||||  ||||||||||    
T  47384305 caaattcgtccttgaattttgaaaaatgagccaaattcgtccttgaattttgcgaaatatctaattagtccccgaatttacaaaatgtcaatcaaatcag 47384404  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | |||||||||||||||| |||||||||||||||| ||||  ||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||    
T  47384405 tccctccgttaagttggtatgttaacggaggtgacatgtaacgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcagtgaccaaattgat 47384504  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaa 262  Q
    ||||||||| ||||||| |||||| |||||| ||||||||||||||||||| |||||| ||||    
T  47384505 tgatttacataaaattgtcaaggaccaaattgattgattttcagaaaattgccaaggaccaaa 47384567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 24226592 - 24226842
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| ||||||||||||||||||  || ||||||||||| |||||||||||||| |||||| ||| | |||||||||||||||  ||||||||||    
T  24226592 caaattcgtccttgaattttcaaaaatcggccaaattcgtccttgaattttgcgaaatagctattttgtccttgaatttacaaaatgtcaatcaaatcag 24226691  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||| || |||  ||||||  ||||||||||||    
T  24226692 tccctccgttaagttggtctgttaacggaggtgacgtgtaacgttgacctcttacaaggcttaccacgtcagatatcacacaagcagggaccaaattgat 24226791  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    ||||||| ||||||||| |||||| |||||| || ||||||||||||||||    
T  24226792 tgatttagagaaaattgtcaaggaccaaattgatggattttcagaaaattg 24226842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 13169761 - 13169511
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| ||||||||||||||||||  || |||| |||| | |||||||||||||||||||||||||   |||||||||||||||  ||||||||||    
T  13169761 caaattcgtccttgaattttcaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtcaatcaaatcag 13169662  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||| | |||||| |||||||  ||||||||||||    
T  13169661 tccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacatggcttaccacgttagatgtcacgcaagcagggaccaaattgat 13169562  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    ||||||||| ||||||||||| || ||||||  | ||||||||||||||||    
T  13169561 tgatttacataaaattgccaatgaccaaattggtggattttcagaaaattg 13169511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 39857656 - 39857906
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||   | ||||||||| | |||||||||||||||||||||||||   |||||||||||||||  ||||||||||    
T  39857656 caaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtcccagaatttacaaaatgtcaatcaaatcag 39857755  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | |||||||||||||||||||||||| |||||||||||||  |||||||||||||| |||||||||||||| |||||| |||| ||  ||||||||||||    
T  39857756 tccctccgttaagttggtctgttaaccgaggtgacgtgtaacgttaacctcttacatggcttaccacgtcagatgtcacgcaaacagggaccaaattgat 39857855  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    ||||||||| |||||||||||||| |||||| || ||||||||||||||||    
T  39857856 tgatttacataaaattgccaaggaccaaattgatggattttcagaaaattg 39857906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 35691438 - 35691688
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| ||||||||||||||||||   | ||||||||  |||||||||||||||| |||||| ||| | |||||||||||||||  ||||||||||    
T  35691438 caaattcgtccttgaattttcaaaaatcggtcaaattcgtctctaaattttgcgaaatagctattttgtccttgaatttacaaaatgtcaatcaaatcag 35691537  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||| |  ||| |||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||| |||||| |||||||  ||||||||||||    
T  35691538 tcccttcactaaattggtctgttaacggaggtggcgtgtaacgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcagggaccaaattgat 35691637  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    |||||||||||||||||||||||| |||||| || ||||||||||||||||    
T  35691638 tgatttacagaaaattgccaaggaccaaattgatggattttcagaaaattg 35691688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 37113952 - 37114202
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| ||||||    | ||||| ||| | |||||||||||||||||||||||||    ||||||||||||||  ||||||||||    
T  37113952 caaattcgtccttgaattttaaaaaattggtcaaattcatccctgaattttgcgaaatatctatttagtccctaaatttacaaaatgtcaatcaaatcag 37114051  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||| ||| || |||||||  ||||||||||||    
T  37114052 tccctccgttaagttggtctgttaacggaggtgacgtgtaacattaacctcttacaaggcttaccacgtcagatgccacgcaagcagggaccaaattgat 37114151  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    ||||||||||||||||||||| ||||||||| || ||||||||||||||||    
T  37114152 tgatttacagaaaattgccaatgatcaaattgatggattttcagaaaattg 37114202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 6605475 - 6605225
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    |||||| || |||||||||| |||||||   | |||| || | | |||||||||||||| ||||||||||   ||||||||||||||   ||||||||||    
T  6605475 caaatttgtccttgaattttaaaaaatcggtcaaatttgttcctgaattttgcgaaatagctatttagtccctgaatttacaaaatgccaatcaaatcag 6605376  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||| ||| ||  ||||||  ||| ||||||||    
T  6605375 tccctccattaagttggtctgttaacggatgtgacgtgtaacgttaacctcttacaaggcttaccacgtcagatgccacacaagcagggactaaattgat 6605276  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    ||||||||||||||||| |||||| |||||| || ||||||||||||||||    
T  6605275 tgatttacagaaaattgtcaaggaccaaattgatggattttcagaaaattg 6605225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 46437118 - 46437288
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| ||||||||||||||||||| || |||||||| || |||||||||||||| |||||| ||| | |||||||||||||||  | ||||||||    
T  46437118 caaattcgtccttgaattttcaaaaatcagccaaattcgtcgttgaattttgcgaaatagctattttgtccttgaatttacaaaatgtcaaccaaatcag 46437217  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtca 171  Q
    | ||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||    
T  46437218 tccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaagcttaccacgtca 46437288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 35403697 - 35403413
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||  || | ||||||| | |||||||||||||||| | ||||||   |||||||||||||||  ||||||||||    
T  35403697 caaattcgtccttgaattttaaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcag 35403598  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | |||||||||| ||||| ||||||||||||||||||||   |||||||||| |||| ||||||||||||| ||| || |||||||  ||||||| ||||    
T  35403597 tccctccgttaaattggtatgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgat 35403498  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    || |||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  35403497 tggtttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 35403413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 74 - 284
Target Start/End: Original strand, 29994961 - 29995172
Alignment:
Q  74 gaatttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcata 173  Q
    |||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||   ||||||||| |||| |||| ||||||||||    
T  29994961 gaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacattaacctctgacaaagctttccacgtcata 29995060  T
Q  174 tgtcatgcaagca-tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgatt 272  Q
    || || |||||||  ||||||| ||||||||||||| |||||| ||||||| |||||| || ||||| || ||||||  |||||| ||||||||| ||||    
T  29995061 tgccacgcaagcagggaccaaactgattgatttacacaaaatttccaaggaccaaattgatggatttacacaaaatttccaaggaccaaattgatggatt 29995160  T
Q  273 atcagaaaattg 284  Q
     |||||||||||    
T  29995161 ttcagaaaattg 29995172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 34775009 - 34775259
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    |||||||||  ||||||||| |||||||   | ||||| | | | |||||||| ||||| ||||||||||   ||||||||||||| |  ||||||||||    
T  34775009 caaattcgtctttgaattttaaaaaatcggtcaaattcattcatgaattttgcaaaatagctatttagtccctgaatttacaaaatatcaatcaaatcag 34775108  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | |||||||||||||||| |||||||||||||||||||||  |||||||||||||| | |||||||||||| ||| || |||||||  ||||||||||||    
T  34775109 tccctccgttaagttggtatgttaacggaggtgacgtgtaacgttaacctcttacatgacttaccacgtcagatgccacgcaagcagggaccaaattgat 34775208  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    ||||||||||||||||| ||||||  ||||| || |||||||| |||||||    
T  34775209 tgatttacagaaaattgtcaaggactaaattgatggattttcataaaattg 34775259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 35401980 - 35402264
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||  |  | ||||||| | |||||||||||||||| | ||||||   |||||||||||||||  ||||||||||    
T  35401980 caaattcgtccttgaattttgaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcag 35402079  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | |||||||||| ||||||||||||||||||||||||||   |||||||||| |||| ||||| ||||||| ||| |||| |||||  ||||||| ||||    
T  35402080 tccctccgttaaattggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttatcacgtcagatgccatgtaagcagggaccaaactgat 35402179  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    | ||||||| |||||| | |||||  ||||| || ||||| || |||||| |||||||  |||||||| |||| |||||||||||    
T  35402180 taatttacacaaaatttcgaaggacgaaattgatggatttacacaaaattttcaaggactaaattgatggattttcagaaaattg 35402264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 48228019 - 48227803
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    |||||||||  ||||||||| |||||||   | |||||||| || ||||||||||||||||||||| |||   |||||||||||||||  ||||||||||    
T  48228019 caaattcgtctttgaattttaaaaaatcggtcaaattcgtctttgaattttgcgaaatatctattttgtccctgaatttacaaaatgtcaatcaaatcag 48227920  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||||| |||||||||| |||||||||||||||||||||  ||||||||||||||| ||||||||||||| ||| || |||||||  ||||||||||||    
T  48227919 tccctccattaagttggtgtgttaacggaggtgacgtgtaacgttaacctcttacaatgcttaccacgtcagatgccacgcaagcagggaccaaattgat 48227820  T
Q  200 tgatttacagaaaattg 216  Q
      |||| ||||||||||    
T  48227819 gaattttcagaaaattg 48227803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 5 - 250
Target Start/End: Complemental strand, 22155921 - 22155686
Alignment:
Q  5 ttcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacc 104  Q
    ||||| ||||||||||||||||||  || ||||||||| | |||||||| ||||| |||||| |||   |||||||||||||||  ||||||||||| ||    
T  22155921 ttcgtccttgaattttcaaaaatcggccaaattcgtccatgaattttgcaaaatagctattttgtccctgaatttacaaaatgtcaatcaaatcagtccc 22155822  T
Q  105 tccg-ttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagcatgaccaaattgattgat 203  Q
    |||| |||||||| |||||||||||||||||||||||  |||||||||||||||||||| |||||        || ||| |   ||||||||| ||||||    
T  22155821 tccgtttaagttgctctgttaacggaggtgacgtgtaacgttaacctcttacaaggcttgccacg--------caagcagg---gaccaaattaattgat 22155733  T
Q  204 ttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    |||||||||||||||||||| |||||| || ||||||||||||||||    
T  22155732 ttacagaaaattgccaaggaccaaatttatggattttcagaaaattg 22155686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 5 - 250
Target Start/End: Complemental strand, 22211836 - 22211601
Alignment:
Q  5 ttcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacc 104  Q
    ||||| ||||||||||||||||||  || ||||||||| | |||||||| ||||| |||||| |||   |||||||||||||||  ||||||||||| ||    
T  22211836 ttcgtccttgaattttcaaaaatcggccaaattcgtccatgaattttgcaaaatagctattttgtccctgaatttacaaaatgtcaatcaaatcagtccc 22211737  T
Q  105 tccg-ttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagcatgaccaaattgattgat 203  Q
    |||| |||||||| |||||||||||||||||||||||  |||||||||||||||||||| |||||        || ||| |   ||||||||| ||||||    
T  22211736 tccgtttaagttgctctgttaacggaggtgacgtgtaacgttaacctcttacaaggcttgccacg--------caagcagg---gaccaaattaattgat 22211648  T
Q  204 ttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    |||||||||||||||||||| |||||| || ||||||||||||||||    
T  22211647 ttacagaaaattgccaaggaccaaattgatggattttcagaaaattg 22211601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 2 - 157
Target Start/End: Original strand, 38549559 - 38549714
Alignment:
Q  2 aaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagt 101  Q
    |||||||| ||||||||||||||||||| || | ||||||| | ||||||| |||||||||||||| || ||||||||||||||||| ||||||||||||    
T  38549559 aaattcgtccttgaattttcaaaaatcagccaagttcgtccctgaattttgtgaaatatctatttaatcctcgaatttacaaaatgtccatcaaatcagt 38549658  T
Q  102 acctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaa 157  Q
     ||| ||||||||||||||||||||| ||||||||||||  |||||||||||||||    
T  38549659 cccttcgttaagttggtctgttaacgaaggtgacgtgtaccgttaacctcttacaa 38549714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 15 - 250
Target Start/End: Original strand, 37791679 - 37791915
Alignment:
Q  15 aattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgttaagt 114  Q
    |||||| |||||||| || ||||| |||  ||||||||| ||||||||||||||||    |||||  |||||||  ||||||||| | | ||| ||||||    
T  37791679 aattttaaaaaatcagccaaattcatccccaaattttgccaaatatctatttagtccctaaatttttaaaatgtcaatcaaatcaatccatccattaagt 37791778  T
Q  115 tggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattgatttacagaaaa 213  Q
    |||  |||||||||||||||||||||  ||||||| ||||||||||||||||||||| ||| |||||| |||  ||||||||||||||||||||| ||||    
T  37791779 tggcatgttaacggaggtgacgtgtaccgttaaccacttacaaggcttaccacgtcagatgccatgcaggcagggaccaaattgattgatttacaaaaaa 37791878  T
Q  214 ttgccaaggatcaaattaattgattttcagaaaattg 250  Q
    |||||||| | ||| || |||||||| ||||||||||    
T  37791879 ttgccaagaaccaacttgattgatttacagaaaattg 37791915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 46 - 220
Target Start/End: Complemental strand, 45361309 - 45361134
Alignment:
Q  46 aattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgtt 145  Q
    |||||||| |||||  ||||||||| | ||| |||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||  |||    
T  45361309 aattttgcaaaatagttatttagtccttgaacttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgtt 45361210  T
Q  146 aacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattgatttacagaaaattgccaa 220  Q
    ||||||||||| |||||||||||||| |||||| |||||||  ||||||||||||  |||| || |||||||||||    
T  45361209 aacctcttacatggcttaccacgtcagatgtcacgcaagcagggaccaaattgatgtattttcataaaattgccaa 45361134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 108 - 250
Target Start/End: Original strand, 38472378 - 38472521
Alignment:
Q  108 gttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattgattta 206  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||| ||| || |||| ||  |||||||||||||||||||    
T  38472378 gttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggcttgccacgtcaaatgccacgcaaacagagaccaaattgattgattta 38472477  T
Q  207 cagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    |||||||||| |||||| |||||| || ||||||||||||||||    
T  38472478 cagaaaattgtcaaggaccaaattgatggattttcagaaaattg 38472521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 11 - 284
Target Start/End: Complemental strand, 20479787 - 20479514
Alignment:
Q  11 cttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgtt 110  Q
    |||||||||| |||||||  || | ||||||| | |||||| ||||||||| | ||||||   |||||||||||||||  ||||||| ||| ||||||||    
T  20479787 cttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgtt 20479688  T
Q  111 aagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattgatttacag 209  Q
    || |||||| |||||||||||||||||||   |||||||||| |||| ||||||||||||| ||| || |||||||  ||||||| |||||||||||||     
T  20479687 aatttggtccgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgacacgcaagcagggaccaaactgattgatttacac 20479588  T
Q  210 aaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||||   |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  20479587 aaaattttgaaggacgaaattgatggatttacacaaaatt-ccaaggaccaaattgatggattttcagaaaattg 20479514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 5 - 185
Target Start/End: Complemental strand, 13039716 - 13039536
Alignment:
Q  5 ttcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacc 104  Q
    ||||| |||||||||||||||||||| | ||||||||| |||||||||||||||| ||||||||||   |||||| ||||||||  ||||||||||| |     
T  13039716 ttcgtccttgaattttcaaaaatcaatcaaattcgtccctaaattttgcgaaataactatttagtccctgaattttcaaaatgtcaatcaaatcagtcca 13039617  T
Q  105 tccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagc 185  Q
    |  |||||||||| |||||||| |||||||||| ||  ||||||| |||||||| |||||||||| | |||||| ||||||    
T  13039616 tatgttaagttggcctgttaacagaggtgacgtttaccgttaaccgcttacaagacttaccacgttagatgtcacgcaagc 13039536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 27664441 - 27664648
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    |||||| || |||||||||| |||||||  || | || |||| | |||||||| ||||||| | ||||||   |||||||||||||||  ||||||||||    
T  27664441 caaattagtccttgaattttgaaaaatcggccaattttgtccctgaattttgcaaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcag 27664540  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | |||||||||||||||| |||||||||||||||||||||  |||||||||| |||| ||||||||||||| ||| || |||||||  ||||||| ||||    
T  27664541 tccctccgttaagttggtatgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgat 27664640  T
Q  200 tgatttac 207  Q
    | ||||||    
T  27664641 taatttac 27664648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 78092 - 77862
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    |||||||||  ||||||||| |||||||  || | ||||||| | |||||||| ||||||| | || |||   ||||||||||||||   ||||||||||    
T  78092 caaattcgtctttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaatttgtccctgaatttacaaaatgccaatcaaatcag 77993  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | |||||||||||||||||||||||| ||||| || ||||  ||||||||   |||| |||||||| |||| || |||||||||||  ||||||| ||||    
T  77992 tccctccgttaagttggtctgttaacagaggttacatgtaacgttaaccttcgacaaagcttaccatgtcagatttcatgcaagcagggaccaaactgat 77893  T
Q  200 tgatttacagaaaattgccaaggatcaaatt 230  Q
    ||||||||| |||||| ||||||| ||||||    
T  77892 tgatttacacaaaatttccaaggaccaaatt 77862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 23904594 - 23904861
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||   | ||||||||  | |||||||| ||||| ||||||||||   |||||||||||||||  ||||||||||    
T  23904594 caaattcgtccttgaattttaaaaaatcggtcaaattcgtctctgaattttgcaaaatagctatttagtccatgaatttacaaaatgtcaatcaaatcag 23904693  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggc--------------ttaccacgtcatatgtcatgcaagca 186  Q
    | ||||| ||||||| ||| ||||| | ||||||||||||  ||||||||||||||||||              ||||||||||| |||||| |||||||    
T  23904694 tccctccattaagttagtccgttaaggaaggtgacgtgtaacgttaacctcttacaaggctcctcttacaaggtttaccacgtcagatgtcacgcaagca 23904793  T
Q  187 -tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaa 254  Q
      ||||||||||||||||||| ||||||||  |||||| |||||| ||  |||||||||||||||||||    
T  23904794 gggaccaaattgattgatttatagaaaatt-tcaaggaccaaattgatgaattttcagaaaattgtcaa 23904861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 198 - 310
Target Start/End: Original strand, 38549714 - 38549826
Alignment:
Q  198 attgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaaaatttccaac 297  Q
    |||||||||||||||||||||||| | |||||| |||||||||||||| |||| |||||| |||||||||||||| | |||||||||||||||| ||||     
T  38549714 attgatttacagaaaattgccaagaaccaaattcattgattttcagaatattgccaaggaccaaattgattgatttttagaaaattgcaaaattcccaat 38549813  T
Q  298 gactctttctcct 310  Q
    | || ||||||||    
T  38549814 ggctttttctcct 38549826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 37796294 - 37796225
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    |||||| || ||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||    
T  37796294 caaatttgtccttgaattttcaaaaatcagccaaattcgtcctcaaattttgcgaaatatctatttagtc 37796225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 48311801 - 48311641
Alignment:
Q  11 cttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgtt 110  Q
    |||||||||| ||||||||  | ||||| ||||||||||||||||||| |||| ||  ||   ||||||| ||||||   |||||||  || | ||||||    
T  48311801 cttgaattttaaaaaatcagtcaaattcatccttaaattttgcgaaatgtctaattcatccctgaatttataaaatggcaatcaaatttgtccgtccgtt 48311702  T
Q  111 aagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtca 171  Q
    |||||||  ||||||  |||||||| |||| | ||||||||||| ||| ||||||||||||    
T  48311701 aagttgggttgttaagagaggtgacatgtacttttaacctcttataagacttaccacgtca 48311641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 77534 - 77484
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||    
T  77534 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgttggtgtcc 77484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 20479197 - 20479147
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||    
T  20479197 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgttggtgtcc 20479147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 38550092 - 38550142
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||    
T  38550092 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgttggtgtcc 38550142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 46437834 - 46437896
Alignment:
Q  188 gaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    |||||||||||||||||||| ||||||||| ||||| |||||| || ||||||||||||||||    
T  46437834 gaccaaattgattgatttactgaaaattgcaaaggaccaaattgatggattttcagaaaattg 46437896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 22211660 - 22211600
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 285  Q
    ||||||||||||||| |||||||||| |||||| ||||||||| |||| ||||||||||||    
T  22211660 caaattaattgatttacagaaaattgccaaggaccaaattgatggattttcagaaaattgc 22211600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 38472462 - 38472522
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 285  Q
    |||||| |||||||| ||||||||||||||||| ||||||||| |||| ||||||||||||    
T  38472462 caaattgattgatttacagaaaattgtcaaggaccaaattgatggattttcagaaaattgc 38472522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 47384496 - 47384556
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 285  Q
    |||||| |||||||| || |||||||||||||| |||||||||||||| ||||||||||||    
T  47384496 caaattgattgatttacataaaattgtcaaggaccaaattgattgattttcagaaaattgc 47384556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 285
Target Start/End: Complemental strand, 6605283 - 6605224
Alignment:
Q  226 aaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 285  Q
    ||||| |||||||| ||||||||||||||||| ||||||||| |||| ||||||||||||    
T  6605283 aaattgattgatttacagaaaattgtcaaggaccaaattgatggattttcagaaaattgc 6605224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 35691997 - 35692048
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcca 363  Q
    ||||||||||||||||||||||||||||||| |||||||||| || ||||||    
T  35691997 ttcaagctctatgtacaatgatgatgtgagaaagcttcaatgttggtgtcca 35692048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 13168142 - 13168200
Alignment:
Q  12 ttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||||| |||||||  || ||||||||||| |||||||||||||||||||||||||    
T  13168142 ttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtc 13168200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 39859342 - 39859264
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaattt 79  Q
    ||||||||| |||||||||| |||||||  || |||| |||| | ||||||||||||||||||||||||| | ||||||    
T  39859342 caaattcgtccttgaattttaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattt 39859264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 45360813 - 45360763
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||| ||||||||||||||||| || |||||    
T  45360813 ttcaagctctatgtacaatgatgaggtgagagagcttcaatgttggtgtcc 45360763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 46438206 - 46438256
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||| ||||||||||||||||| || |||||    
T  46438206 ttcaagctctatgtacaatgatgaggtgagagagcttcaatgttggtgtcc 46438256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 24228518 - 24228453
Alignment:
Q  5 ttcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    |||||||||||||||| ||||||   || ||||||||| | |||||||||||||||||||||||||    
T  24228518 ttcgttcttgaattttaaaaaattggccaaattcgtccctgaattttgcgaaatatctatttagtc 24228453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 353
Target Start/End: Original strand, 34775610 - 34775651
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatg 353  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  34775610 ttcaagctctatgtacaatgatgaggtgagagagcttcaatg 34775651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 250
Target Start/End: Original strand, 38549739 - 38549800
Alignment:
Q  189 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    |||||||| |||||||| ||||| ||||||||||| |||||| ||||||||| |||||||||    
T  38549739 accaaattcattgattttcagaatattgccaaggaccaaattgattgatttttagaaaattg 38549800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 47386322 - 47386253
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||||| ||| |||||| ||||||||  | ||||||||||| ||||||||||||||| |||||||||    
T  47386322 caaattcgtcctttaattttaaaaaatcagtcaaattcgtccttgaattttgcgaaatatttatttagtc 47386253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 353
Target Start/End: Original strand, 48851118 - 48851159
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatg 353  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  48851118 ttcaagctctatgcacaatgatgatgtgagagagcttcaatg 48851159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 22155745 - 22155685
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 285  Q
    ||||||||||||||| |||||||||| |||||| |||||| || |||| ||||||||||||    
T  22155745 caaattaattgatttacagaaaattgccaaggaccaaatttatggattttcagaaaattgc 22155685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 24226783 - 24226843
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 285  Q
    |||||| ||||||||  |||||||||||||||| ||||||||| |||| ||||||||||||    
T  24226783 caaattgattgatttagagaaaattgtcaaggaccaaattgatggattttcagaaaattgc 24226843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 35691629 - 35691689
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 285  Q
    |||||| |||||||| |||||||||| |||||| ||||||||| |||| ||||||||||||    
T  35691629 caaattgattgatttacagaaaattgccaaggaccaaattgatggattttcagaaaattgc 35691689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 225 - 297
Target Start/End: Original strand, 37791856 - 37791928
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaaaatttccaac 297  Q
    |||||| |||||||| || ||||||| |||| | ||| ||||||||||  |||||||||||||||||||||||    
T  37791856 caaattgattgatttacaaaaaattgccaagaaccaacttgattgatttacagaaaattgcaaaatttccaac 37791928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 37114500 - 37114550
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    ||||| |||||||||||||||||| ||||||||||||||||| || |||||    
T  37114500 ttcaaactctatgtacaatgatgaggtgagagagcttcaatgttggtgtcc 37114550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 312 - 353
Target Start/End: Original strand, 24227118 - 24227159
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatg 353  Q
    ||||||||||||||||||||||||  ||||||||||||||||    
T  24227118 ttcaagctctatgtacaatgatgagatgagagagcttcaatg 24227159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 46439611 - 46439542
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    |||||||||  ||||||||| ||||||| | | || | ||| ||||||||||||||||||||||||||||    
T  46439611 caaattcgtcattgaatttttaaaaatcgatcaaacttgtctttaaattttgcgaaatatctatttagtc 46439542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 30940537 - 30940469
Alignment:
Q  2 aaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||| ||||||||||||| |||||||  || ||||||||  | |||||| ||||||||||||||||||    
T  30940537 aaatttgttcttgaattttaaaaaatcggccaaattcgtctcttaattttacgaaatatctatttagtc 30940469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 34775200 - 34775260
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 285  Q
    |||||| |||||||| |||||||||||||||||  |||||||| |||| ||| ||||||||    
T  34775200 caaattgattgatttacagaaaattgtcaaggactaaattgatggattttcataaaattgc 34775260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 37114143 - 37114203
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 285  Q
    |||||| |||||||| |||||||||| ||| || ||||||||| |||| ||||||||||||    
T  37114143 caaattgattgatttacagaaaattgccaatgatcaaattgatggattttcagaaaattgc 37114203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 39857847 - 39857907
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 285  Q
    |||||| |||||||| || ||||||| |||||| ||||||||| |||| ||||||||||||    
T  39857847 caaattgattgatttacataaaattgccaaggaccaaattgatggattttcagaaaattgc 39857907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 6604916 - 6604867
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||| ||| ||||||||||||||||| || |||||    
T  6604916 ttcaagctctatgtacaatg-tgaggtgagagagcttcaatgttggtgtcc 6604867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 22155377 - 22155327
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||| |||||| | |||||||| || |||||    
T  22155377 ttcaagctctatgtacaatgatgaggtgagataacttcaatgttggtgtcc 22155327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 22211292 - 22211242
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||| |||||| | |||||||| || |||||    
T  22211292 ttcaagctctatgtacaatgatgaggtgagataacttcaatgttggtgtcc 22211242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 38474256 - 38474178
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaattt 79  Q
    |||||| || || ||||||| |||||||   | ||||||||| | ||||||||||||||||||||||||| | ||||||    
T  38474256 caaattagtcctcgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccttgaattt 38474178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 45359359 - 45359425
Alignment:
Q  13 tgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaattt 79  Q
    |||||||| |||||||   | ||| ||||||| ||||||||||||||||||||||||| | ||||||    
T  45359359 tgaattttaaaaaatcggtcaaatccgtccttgaattttgcgaaatatctatttagtccttgaattt 45359425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 47384854 - 47384904
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||| ||| ||||||||||||||||||| ||||||| || |||||    
T  47384854 ttcaagctctctgttcaatgatgatgtgagagagattcaatgttggtgtcc 47384904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 217
Target Start/End: Complemental strand, 13036387 - 13036358
Alignment:
Q  188 gaccaaattgattgatttacagaaaattgc 217  Q
    ||||||||||||||||||||||||||||||    
T  13036387 gaccaaattgattgatttacagaaaattgc 13036358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 27666178 - 27666109
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||||| |||||||||| |||||||  || | ||||||| | |||||||||||||||| | ||||||    
T  27666178 caaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtc 27666109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 34777028 - 34776959
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||||||||| |||||| ||||||   || ||||| | | | |||||||||||||||||||||||||    
T  34777028 caaattcgttcttaaattttaaaaaattggccaaattcattcctgaattttgcgaaatatctatttagtc 34776959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 353
Target Start/End: Original strand, 38472822 - 38472863
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatg 353  Q
    ||||||||||||||||||| ||||  ||||||||||||||||    
T  38472822 ttcaagctctatgtacaattatgagatgagagagcttcaatg 38472863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 37115639 - 37115571
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagt 69  Q
    |||||||||  ||||||||| ||||||||  | ||||||| | | |||||||| |||||||||||||||    
T  37115639 caaattcgtcattgaattttaaaaaatcagtcaaattcgttcctgaattttgcaaaatatctatttagt 37115571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 46437837 - 46437897
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 285  Q
    |||||| |||||||| | ||||||||  ||||| ||||||||| |||| ||||||||||||    
T  46437837 caaattgattgatttactgaaaattgcaaaggaccaaattgatggattttcagaaaattgc 46437897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 144; Significance: 1e-75; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 8541349 - 8541126
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    |||||||||  ||||||||| |||||||  || ||||||||| | ||||||||||||||||||||||||| | |||||||||||||||  ||||||||||    
T  8541349 caaattcgtcattgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccttgaatttacaaaatgtcaatcaaatcag 8541250  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | |||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||    
T  8541249 tccctccgttaagttggtctgttaacggaggtgatgtgtaacgttaacctcttacaaggcttaccacgtcagatgtcatgcaagcagggaccaaattgat 8541150  T
Q  200 tgatttacagaaaattgccaagga 223  Q
    ||||||||||||||||||||||||    
T  8541149 tgatttacagaaaattgccaagga 8541126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 34 - 254
Target Start/End: Complemental strand, 28813810 - 28813589
Alignment:
Q  34 aattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtg 133  Q
    ||||||||||| |||||||||||||||||||||||||   |||||||||||||||  ||||||||||| |||||||||| ||||| ||||||||||||||    
T  28813810 aattcgtccttgaattttgcgaaatatctatttagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaaattggtgtgttaacggaggtg 28813711  T
Q  134 acgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattgatttacagaaaattgccaaggatcaaattaa 232  Q
    |||||||  ||||||||||||||||||||||||||| | |||||| |||||||  |||||||||||||||||||||||||||||||||||| |||||| |    
T  28813710 acgtgtaacgttaacctcttacaaggcttaccacgttagatgtcacgcaagcagcgaccaaattgattgatttacagaaaattgccaaggaccaaattga 28813611  T
Q  233 ttgattttcagaaaattgtcaa 254  Q
    |  |||||||||||||||||||    
T  28813610 tgaattttcagaaaattgtcaa 28813589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 12738814 - 12738564
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||  || ||||||| | | |||||||||||||||||||||||||   |||||||||||||||  ||||||||||    
T  12738814 caaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtcaatcaaatcag 12738715  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | |||||||||||||||| |||||||||||||||||||||  |||||||||||||| | |||||||||||| ||| || |||||||  ||||||||||||    
T  12738714 tccctccgttaagttggtttgttaacggaggtgacgtgtaacgttaacctcttacatgacttaccacgtcagatgccacgcaagcagggaccaaattgat 12738615  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    ||||||||| |||||||||||||| |||||| || ||||||||||||||||    
T  12738614 tgatttacataaaattgccaaggaccaaattgatggattttcagaaaattg 12738564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 12801637 - 12801387
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||  || ||||||| | | |||||||||||||||||||||||||   |||||||||||||||  ||||||||||    
T  12801637 caaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtcaatcaaatcag 12801538  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | |||||||||||||||| |||||||||||||||||||||  |||||||||||||| | |||||||||||| ||| || |||||||  ||||||||||||    
T  12801537 tccctccgttaagttggtttgttaacggaggtgacgtgtaacgttaacctcttacatgacttaccacgtcagatgccacgcaagcagggaccaaattgat 12801438  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    ||||||||| |||||||||||||| |||||| || ||||||||||||||||    
T  12801437 tgatttacataaaattgccaaggaccaaattgatggattttcagaaaattg 12801387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 30463911 - 30464161
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||   | ||||||||| | |||||||||||||||||||||||||   ||||||||||||| |  ||||||||||    
T  30463911 caaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaatttacaaaatatcaatcaaatcag 30464010  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | |||| |||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||| |||| |||||| |||||||  ||||||||||||    
T  30464011 tccctctgttaagttggtctgtttacggaggtgacgtgtaacgttaacctcttacaaggcttaccatgtcagatgtcacgcaagcagggaccaaattgat 30464110  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    ||||||||||||||||| |||||| |||||| || ||||||||||||||||    
T  30464111 tgatttacagaaaattgtcaaggaccaaattgatggattttcagaaaattg 30464161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 28822168 - 28821915
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| ||||||    | ||||||||| | |||||||||||||  |||||| ||| | |||||||||||||||  ||||||||||    
T  28822168 caaattcgtccttgaatttttaaaaataggtcaaattcgtccctgaattttgcgaaattgctattttgtccttgaatttacaaaatgtcaatcaaatcag 28822069  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | ||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||| |||| ||| || |||||||  ||||||||||||    
T  28822068 tccctccgttaagttggtctgttaacggaagtgacgtgtaacgttaacctcttacaaggcttaccatgtcagatgccaagcaagcagggaccaaattgat 28821969  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaa 254  Q
    ||||||||||||||||||||||| ||||||| || ||||||||||||||||||||    
T  28821968 tgatttacagaaaattgccaagg-tcaaattgatggattttcagaaaattgtcaa 28821915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 17578013 - 17577729
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagt-catcgaatttacaaaatgttcatcaaatca 99  Q
    ||||||||| |||||||||| |||||||  || | ||| ||| | |||||||| ||||||| | ||||| ||| |||||||||||||||  |||||||||    
T  17578013 caaattcgtccttgaattttgaaaaatcggcccatttcttccctgaattttgcaaaatatcaaattagttcat-gaatttacaaaatgtcaatcaaatca 17577915  T
Q  100 gtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattga 198  Q
    || |||||||||| ||||||||||||||||| |||||||||  |||||||||| |||| ||||||||||||| |||||| |||||||  ||||||| |||    
T  17577914 gtccctccgttaaattggtctgttaacggagctgacgtgtaacgttaacctctaacaaagcttaccacgtcagatgtcacgcaagcagggaccaaactga 17577815  T
Q  199 ttgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    |||||||||| |||||| ||||||| |||||| || ||||| || ||||||  |||||| ||||||||| |||| ||| |||||||    
T  17577814 ttgatttacacaaaatttccaaggaccaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcataaaattg 17577729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 12 - 250
Target Start/End: Original strand, 32134253 - 32134497
Alignment:
Q  12 ttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgtta 111  Q
    ||||||||||||||||||||| |||||||| || |||||||  ||||||||||||||||   ||||||| |||||||  |||||||||||   || ||||    
T  32134253 ttgaattttcaaaaatcaaccaaattcgtctttgaattttgtaaaatatctatttagtccctgaatttataaaatgtcaatcaaatcagtctatctgtta 32134352  T
Q  112 -----agttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattgattt 205  Q
         |||||||||||||||||||||||||||||  ||||||||||||||| ||||| ||||||| ||| || |||||||  ||||||||||||||||||    
T  32134353 agttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaagcttatcacgtcagatgccacgcaagcagggaccaaattgattgattt 32134452  T
Q  206 acagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    |||||||||||||||||| |||||| ||  ||||||| |||||||    
T  32134453 acagaaaattgccaaggaccaaattgatgaattttcataaaattg 32134497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 7269524 - 7269274
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    |||||||||  ||||||||| |||||||  |  | ||||||| | |||||||||||||||| | ||||||   ||||||| |||||||| ||||||||||    
T  7269524 caaattcgtctttgaattttaaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttataaaatgttaatcaaatcag 7269425  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    |   |||||||||||| |||||||||||||||||||||||  |||||||||| |||| ||||||||||||| ||| || ||||| |  ||||||| ||||    
T  7269424 tcagtccgttaagttgatctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagtagggaccaaactgat 7269325  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    ||||||||| |||||| ||||||| |||||| || ||||||||||||||||    
T  7269324 tgatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 7269274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 34328905 - 34328651
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| ||||||||||||||||||   | ||||||||| | |||||||| ||||| |||||| ||| | |||||||||||||||  ||||||||||    
T  34328905 caaattcgtccttgaattttcaaaaatcggtcaaattcgtccatgaattttgcaaaatagctattttgtccttgaatttacaaaatgtcaatcaaatcag 34328806  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaag----gcttaccacgtcatatgtcatgcaagca-tgaccaaat 195  Q
    |  ||||||||||||||||||||||||| |||||||||||  ||||||||||||||||    ||||||||||||| ||| || |||||||  ||||||||    
T  34328805 tcgctccgttaagttggtctgttaacggtggtgacgtgtaacgttaacctcttacaaggctagcttaccacgtcagatgccacgcaagcagggaccaaat 34328706  T
Q  196 tgattgatttacagaaaattgccaaggatc-aaattaattgattttcagaaaattg 250  Q
    ||||||||||| || |||||  |||||| | ||||| || ||||||||||||||||    
T  34328705 tgattgatttagag-aaattttcaaggaccaaaattgatggattttcagaaaattg 34328651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 21843070 - 21842786
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||   | | || |||| | |||||||||||||||| | ||||||   |||||||||||||||  ||||||||||    
T  21843070 caaattcgtccttgaattttgaaaaatcggtcaattttgtccatgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcag 21842971  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | |||||||||||||  | | ||||||||||||||||||   |||||||||| |||| ||||||||||||| ||| || |||||||  ||||||| ||||    
T  21842970 tccctccgttaagttttttttttaacggaggtgacgtgttacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgat 21842871  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||||||| ||||||  ||| || |||||| || ||||| || |||||| ||||||| ||||||||| |||| | |||||||||    
T  21842870 tgatttacacaaaattttcaatgaccaaattgatggatttacacaaaattttcaaggaccaaattgatggatttttagaaaattg 21842786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 11 - 284
Target Start/End: Complemental strand, 40782279 - 40782006
Alignment:
Q  11 cttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgtt 110  Q
    |||||||||| |||||||  || | ||||||| | |||||| ||||||||| | ||||||   |||||||||||||||  ||||||| ||| ||||||||    
T  40782279 cttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgtt 40782180  T
Q  111 aagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattgatttacag 209  Q
    || |||||| |||||||||||||||||||   |||||||||| |||| ||||||||||||| ||| || |||||||  ||||||| |||||||||||||     
T  40782179 aatttggtccgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacac 40782080  T
Q  210 aaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  40782079 aaaatttcgaaggacgaaattgatggatttacacaaaatt-ccaaggatcaaattgatggattttcagaaaattg 40782006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 2852897 - 2853104
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||   | | ||||||| | |||||||||||||||| | |||||    |||||||||||||||  ||||||||||    
T  2852897 caaattcgtccttgaattttaaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaatttacaaaatgtcaatcaaatcag 2852996  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagcatg-accaaattgat 199  Q
    | ||||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||||||||| ||| ||| || ||||||| | |||||| ||||    
T  2852997 tccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacttcagatgccacgcaagcaggaaccaaactgat 2853096  T
Q  200 tgatttac 207  Q
    ||||||||    
T  2853097 tgatttac 2853104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 11 - 284
Target Start/End: Original strand, 29620159 - 29620432
Alignment:
Q  11 cttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgtt 110  Q
    |||||||||| |||||||  || | ||||||| | |||||| ||||||||| | ||||||   |||||||||||||||  ||||||| ||| ||||||||    
T  29620159 cttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtctctgaatttacaaaatgtcaatcaaattagtccctccgtt 29620258  T
Q  111 aagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattgatttacag 209  Q
    || |||||| |||||||||||||||||||   |||||||||| |||| ||||||||||||| ||| || |||||||  ||||||| |||||||||||||     
T  29620259 aatttggtccgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgacacgcaagcagggaccaaactgattgatttacac 29620358  T
Q  210 aaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||||   |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  29620359 aaaattttgaaggacgaaattgatggatttacacaaaatt-ccaaggaccaaattgatggattttcagaaaattg 29620432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 41493859 - 41494042
Alignment:
Q  5 ttcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacc 104  Q
    ||||| ||||||||||||||||||| || |||||||||| |||||||| |||||||||||||||||   |||| | ||||||||  |||||||| || |     
T  41493859 ttcgtccttgaattttcaaaaatcagccaaattcgtcctcaaattttgtgaaatatctatttagtccatgaatattcaaaatgtcaatcaaatccgtcca 41493958  T
Q  105 tccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagcatg 188  Q
    ||||||||||||| |||||||||||| |||||||||  ||||||  ||||||||||| ||||| ||| ||||||  ||||||||    
T  41493959 tccgttaagttggcctgttaacggagatgacgtgtaccgttaactgcttacaaggctcaccacatcagatgtcacacaagcatg 41494042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 74 - 249
Target Start/End: Original strand, 42471632 - 42471808
Alignment:
Q  74 gaatttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcata 173  Q
    |||||||||||||||  ||||||| ||| |||| ||||| ||||||||||||||||||||||||||   |||||||||| |||| || |||||||||| |    
T  42471632 gaatttacaaaatgtcaatcaaattagtccctctgttaaattggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcgtaccacgtcaga 42471731  T
Q  174 tgtcatgcaagca-tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaatt 249  Q
    || || |||||||  ||| |||||||| |||||||| |||||| ||||||| |||||| || |||||||||||||||    
T  42471732 tgccacgcaagcagggactaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaatt 42471808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 34 - 171
Target Start/End: Complemental strand, 27077512 - 27077375
Alignment:
Q  34 aattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtg 133  Q
    |||||||||| ||||||| | ||||||||||||  ||   |||||||| ||||||  |||||||| || |||||||||||||||  |||||| |||||||    
T  27077512 aattcgtcctcaaatttttcaaaatatctattttatccctgaatttaccaaatgtcaatcaaatcggtccctccgttaagttggcatgttaatggaggtg 27077413  T
Q  134 acgtgtattgttaacctcttacaaggcttaccacgtca 171  Q
    ||||||| ||||||||||| ||||||||| ||| ||||    
T  27077412 acgtgtactgttaacctctcacaaggcttgccatgtca 27077375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 2181586 - 2181524
Alignment:
Q  188 gaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    ||||||||||||| |||||||||||||||||||||| |||||| || ||||||||||||||||    
T  2181586 gaccaaattgattaatttacagaaaattgccaaggaccaaattgatggattttcagaaaattg 2181524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 7268973 - 7268923
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  7268973 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgttgatgtcc 7268923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 8539686 - 8539755
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||||| |||||||||| ||||||||| | ||||||| ||| |||||||||||||||||||||||||    
T  8539686 caaattcgtccttgaattttgaaaaatcaatcaaattcgttcttgaattttgcgaaatatctatttagtc 8539755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 284
Target Start/End: Original strand, 24539933 - 24540057
Alignment:
Q  161 ttaccacgtcatatgtcatgcaagcatg-accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaac 259  Q
    ||||||||||| ||| || ||||||| | |||||| ||||||||||||| ||||||  |||||| |||||| || ||||| || ||||||  |||||| |    
T  24539933 ttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaattttcaaggaccaaattgatggatttacacaaaatttccaaggacc 24540032  T
Q  260 aaattgattgattatcagaaaattg 284  Q
    |||||||| |||| |||||||||||    
T  24540033 aaattgatggattttcagaaaattg 24540057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 36057726 - 36057659
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttag 68  Q
    ||||||||| ||||||||||||||||||  || ||||||||| | |||||||||||||||||||||||    
T  36057726 caaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttag 36057659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 21842479 - 21842429
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||    
T  21842479 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgttggtgtcc 21842429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 40781706 - 40781656
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||    
T  40781706 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgttggtgtcc 40781656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 42472130 - 42472180
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||    
T  42472130 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgttggtgtcc 42472180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 17574329 - 17574398
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||||| |||||||||| |||||||  || ||||||||| | |||||||||||||||||||||||||    
T  17574329 caaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtc 17574398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 30464102 - 30464162
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 285  Q
    |||||| |||||||| ||||||||||||||||| ||||||||| |||| ||||||||||||    
T  30464102 caaattgattgatttacagaaaattgtcaaggaccaaattgatggattttcagaaaattgc 30464162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 17575412 - 17575362
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||||||||||||||||| ||| || |||||    
T  17575412 ttcaagctctatgtacaatgatgatgtgagagagcttccatgttggtgtcc 17575362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 17576132 - 17576082
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||||||||||||||||| ||| || |||||    
T  17576132 ttcaagctctatgtacaatgatgatgtgagagagcttccatgttggtgtcc 17576082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 17577443 - 17577393
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||||||||||||||||| ||| || |||||    
T  17577443 ttcaagctctatgtacaatgatgatgtgagagagcttccatgttggtgtcc 17577393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 29620749 - 29620799
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||||||||||||||||||||||||||||| ||||||| || |||||    
T  29620749 ttcaagctctatgtacaatgatgatgtgagagagtttcaatgttggtgtcc 29620799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 7267854 - 7267923
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||||| |||||||||| |||||||  || ||||||||  | |||||||||||||||||||||||||    
T  7267854 caaattcgtccttgaattttaaaaaatcgtccaaattcgtcactgaattttgcgaaatatctatttagtc 7267923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 43492211 - 43492142
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||||| ||| ||||||||||||||| || | ||| ||| | |||||||||||||||||||||||||    
T  43492211 caaattcgtacttaaattttcaaaaatcagccaagttcatccctgaattttgcgaaatatctatttagtc 43492142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 2181248 - 2181198
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||| ||||||||||||||||| ||||||||||||||||| || |||||    
T  2181248 ttcaagatctatgtacaatgatgaggtgagagagcttcaatgttggtgtcc 2181198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 312 - 353
Target Start/End: Complemental strand, 8540821 - 8540780
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatg 353  Q
    |||||||| ||||||||||||||| |||||||||||||||||    
T  8540821 ttcaagctttatgtacaatgatgaggtgagagagcttcaatg 8540780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 312 - 353
Target Start/End: Original strand, 30464512 - 30464553
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatg 353  Q
    |||||||||||||||||||||| | |||||||||||||||||    
T  30464512 ttcaagctctatgtacaatgataaggtgagagagcttcaatg 30464553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 34327646 - 34327715
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||||| ||||||||||| |||||   || ||||||||  | |||||||||||||||||||||||||    
T  34327646 caaattcgtccttgaattttctaaaattggccaaattcgtcgctgaattttgcgaaatatctatttagtc 34327715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 2181583 - 2181523
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 285  Q
    |||||| ||| |||| |||||||||| |||||| ||||||||| |||| ||||||||||||    
T  2181583 caaattgattaatttacagaaaattgccaaggaccaaattgatggattttcagaaaattgc 2181523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 12738623 - 12738563
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 285  Q
    |||||| |||||||| || ||||||| |||||| ||||||||| |||| ||||||||||||    
T  12738623 caaattgattgatttacataaaattgccaaggaccaaattgatggattttcagaaaattgc 12738563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 12801446 - 12801386
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 285  Q
    |||||| |||||||| || ||||||| |||||| ||||||||| |||| ||||||||||||    
T  12801446 caaattgattgatttacataaaattgccaaggaccaaattgatggattttcagaaaattgc 12801386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 159
Target Start/End: Complemental strand, 19998430 - 19998360
Alignment:
Q  91 atcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtat--tgttaacctcttacaagg 159  Q
    |||||||| || |||||||||||||||  |||| |||||||||| ||||||  ||||||||||| ||||||    
T  19998430 atcaaatcggtccctccgttaagttggcatgttgacggaggtgatgtgtatactgttaacctctcacaagg 19998360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 284
Target Start/End: Complemental strand, 28813652 - 28813593
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    |||||| |||||||| |||||||||| |||||| |||||||||  ||| |||||||||||    
T  28813652 caaattgattgatttacagaaaattgccaaggaccaaattgatgaattttcagaaaattg 28813593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 312 - 351
Target Start/End: Original strand, 32134806 - 32134845
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaa 351  Q
    ||||||||||| |||||||||||| |||||||||||||||    
T  32134806 ttcaagctctacgtacaatgatgaggtgagagagcttcaa 32134845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 18624015 - 18624065
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    ||||||| ||||||| ||||| |||||||||||||||||||| || |||||    
T  18624015 ttcaagccctatgtataatgaagatgtgagagagcttcaatgttggtgtcc 18624065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 34328350 - 34328300
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    |||||||| | ||||||||||||| ||||||||||||||||| || |||||    
T  34328350 ttcaagctttgtgtacaatgatgaggtgagagagcttcaatgttggtgtcc 34328300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 18625121 - 18625052
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||||| ||||||||||||   |||| |  ||||||||| | ||||||| |||||||||||||||||    
T  18625121 caaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtc 18625052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 353
Target Start/End: Original strand, 41494404 - 41494445
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatg 353  Q
    |||||| ||||||||||||| ||||||||||| |||||||||    
T  41494404 ttcaagttctatgtacaatggtgatgtgagagtgcttcaatg 41494445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 120; Significance: 3e-61; HSPs: 3)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 1633 - 1385
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||   | ||||||||| | |||||||  ||||| | ||||||||   |||||||||||||||   |||||||||    
T  1633 caaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgaaaaatagcaatttagtccctgaatttacaaaatgtcattcaaatcag 1534  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 199  Q
    | |||||||||||||||||||||||||||  |||||||||  ||||||||||||||||||||||||||||| |||||| |||||||  ||||||||||||    
T  1533 tccctccgttaagttggtctgttaacgga--tgacgtgtaacgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcagagaccaaattgat 1436  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 250  Q
    |||||||||||||||||||||||| |||||| || || |||||||||||||    
T  1435 tgatttacagaaaattgccaaggaccaaattgatggaatttcagaaaattg 1385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 353
Target Start/End: Complemental strand, 1033 - 992
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatg 353  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  1033 ttcaagctctatgtacaatgatgaggtgagagagcttcaatg 992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 1444 - 1384
Alignment:
Q  225 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 285  Q
    |||||| |||||||| |||||||||| |||||| ||||||||| || | ||||||||||||    
T  1444 caaattgattgatttacagaaaattgccaaggaccaaattgatggaatttcagaaaattgc 1384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 110; Significance: 2e-55; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 106681 - 106978
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| ||||||||| | ||  ||| || |||| |||| | |||||| |||||||||||||||||   ||||||||||||||||  ||||||||||    
T  106681 caaattcgtccttgaatttaccaa--tcagccaaatttgtccatgaattttacgaaatatctatttagtttccgaatttacaaaatgtcaatcaaatcag 106778  T
Q  101 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagcatg-accaaattgat 199  Q
    | |||||||||||||||||||||         ||||||||  ||| ||||||||||||||||||||||| | |||||| ||||||| | |||||||||||    
T  106779 tccctccgttaagttggtctgtt---------gacgtgtaccgttgacctcttacaaggcttaccacgttagatgtcacgcaagcagggaccaaattgat 106869  T
Q  200 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaaaatttccaacga 299  Q
    ||||||||  ||||||| |||||| |||||| ||||||||||| ||||||| |||||| |||||||||||||| ||| |||||||  ||||| ||| ||     
T  106870 tgatttacgtaaaattgtcaaggaccaaattgattgattttcataaaattgccaaggaccaaattgattgattttcaaaaaattgtgaaattcccagcgg 106969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 107234 - 107284
Alignment:
Q  312 ttcaagctctatgtacaatgatgatgtgagagagcttcaatgctgatgtcc 362  Q
    ||||| ||| |||||||||||||||||||||||||||||||| || |||||    
T  107234 ttcaaactcaatgtacaatgatgatgtgagagagcttcaatgttggtgtcc 107284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 91; Significance: 5e-44; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 103 - 284
Target Start/End: Complemental strand, 7213 - 7031
Alignment:
Q  103 cctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattg 201  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||||||||||||| ||| || |||||||  ||||||| ||||||    
T  7213 cctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattg 7114  T
Q  202 atttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||||| |||||| ||||||| |||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  7113 atttacacaaaatttccaaggaccaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 7031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 14421 - 14293
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 100  Q
    ||||||||| |||||||||| |||||||  |  | ||||||| | |||||||||||||||| | ||||||   |||||||||||||||  ||||||||||    
T  14421 caaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcag 14322  T
Q  101 tacctccgttaagttggtctgttaacgga 129  Q
    | |||||||||||||||||||||||||||    
T  14321 tccctccgttaagttggtctgttaacgga 14293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1712 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold1712
Description:

Target: scaffold1712; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 74 - 283
Target Start/End: Original strand, 1066 - 1276
Alignment:
Q  74 gaatttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcata 173  Q
    |||||||||||||||  ||||||| ||| |||||||||| ||||||||||||||||||||||||||   |||||||||| |||| || |||||||||| |    
T  1066 gaatttacaaaatgtcaatcaaattagtccctccgttaaattggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcgtaccacgtcaaa 1165  T
Q  174 tgtcatgcaagca-tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgatt 272  Q
    || || |||||||  |||||||||||| |||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||||||||||||| ||||    
T  1166 tgccacgcaagcagggaccaaattgatggatttacacaaaatttcgaaggactaaattgatggatttacacaaaatttccaaggaacaaattgatggatt 1265  T
Q  273 atcagaaaatt 283  Q
     ||||||||||    
T  1266 ttcagaaaatt 1276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 11 - 284
Target Start/End: Complemental strand, 54326 - 54053
Alignment:
Q  11 cttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgtt 110  Q
    |||||||||| |||||||   | | ||||||| | |||||| ||||||||| | ||||||   |||||||||||||||  ||||||| ||| ||||||||    
T  54326 cttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgtt 54227  T
Q  111 aagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattgatttacag 209  Q
    || |||||| |||||||||||||||||||   |||||||| | |||| ||||||||||||| ||| || |||||||  ||||||| |||||||||||||     
T  54226 aatttggtccgttaacggaggtgacgtgtcacgttaacctttgacaaagcttaccacgtcagatgacacgcaagcagggaccaaactgattgatttacac 54127  T
Q  210 aaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 284  Q
    ||||||   |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  54126 aaaattttgaaggacgaaattgatggatttacacaaaatt-acaaggaccaaattgatggattttcagaaaattg 54053  T

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Target: scaffold0002 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 436276 - 436341
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctattt 66  Q
    ||||||||||||||||||||||||||||| || ||||| ||| |||||||||||||||||||||||    
T  436276 caaattcgttcttgaattttcaaaaatcagccaaattcatccataaattttgcgaaatatctattt 436341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 108 - 183
Target Start/End: Complemental strand, 63692 - 63617
Alignment:
Q  108 gttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaa 183  Q
    |||||||||||| |||||| || ||||| || | |||||||||||||||||||||||||||||| |||||| ||||    
T  63692 gttaagttggtcagttaactgatgtgacatgcagtgttaacctcttacaaggcttaccacgtcagatgtcacgcaa 63617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 8273 - 8342
Alignment:
Q  1 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 70  Q
    ||||||||| |||||||||| ||||||   || ||||||| ||| |||||||| ||||||||||||||||    
T  8273 caaattcgtccttgaattttaaaaaattggccaaattcgttcttgaattttgcaaaatatctatttagtc 8342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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