View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10259_low_14 (Length: 256)
Name: NF10259_low_14
Description: NF10259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10259_low_14 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 19 - 256
Target Start/End: Original strand, 41358617 - 41358853
Alignment:
| Q |
19 |
caacaggctaatgatagaggatcatcgatacaccacatctttaaccaaaactttcgatattgagtatataaattacctctctatctaatatccgagttca |
118 |
Q |
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| T |
41358617 |
caacaggctaatgatagaggatcatcgatacaccacatctttaaccaaaaccttcgatattgagtatatagattacctctctatctaatatccgagttca |
41358716 |
T |
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| Q |
119 |
ttcataaatagtttcctaaagcttgtatatttcttatgaattaaatgtgagttccatgacttgagaaattttttgagttccgtatcaannnnnnnnnnaa |
218 |
Q |
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| T |
41358717 |
ttcataaatagtttcctaaagcatgtatatttcttatgaattaaatgcgatttccatgacttgagaaattttttgagttccgtatcaa-ttttttttaaa |
41358815 |
T |
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| Q |
219 |
acaaatatatatagagtagtataatccaacagagtacc |
256 |
Q |
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| T |
41358816 |
acaaatatatatagagtagtataatccaacagagtacc |
41358853 |
T |
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