View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10259_low_23 (Length: 236)
Name: NF10259_low_23
Description: NF10259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10259_low_23 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 6488367 - 6488600
Alignment:
| Q |
1 |
cttgactctttttatcttttttaatcacaccctcctttcttttagctaccacattcttcttttcacccttatttatacatctccttctaattcattctca |
100 |
Q |
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| T |
6488367 |
cttgactctttttatcttttttaatcacaccctcctttcttttagctaccacattcttcttttcacccctatttatacatctccttctaattcattctta |
6488466 |
T |
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| Q |
101 |
cttcacaagcatacacatttttgttgtatctcattacattaacaaaagtaactggttttttcattcatcatatcaaaacatatatcttcttatttatatc |
200 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||| |
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| T |
6488467 |
cttcacaagcatacaca-ttttgttgtatctcattacattaacaaaagtatctggtttttt-attcatcatatcaaaacatatatcttcttgtttatatc |
6488564 |
T |
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| Q |
201 |
atataaatcatctttgaccggttgatggccaccaga |
236 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
6488565 |
atataaatcatctttgaccggttgatggccaccaga |
6488600 |
T |
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