View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1026-Insertion-16 (Length: 474)

Name: NF1026-Insertion-16
Description: NF1026
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1026-Insertion-16
NF1026-Insertion-16
[»] chr7 (20 HSPs)
chr7 (374-471)||(38837217-38837324)
chr7 (374-471)||(7389389-7389496)
chr7 (371-471)||(38267037-38267147)
chr7 (63-130)||(47363270-47363336)
chr7 (374-469)||(4999509-4999614)
chr7 (374-468)||(11044188-11044282)
chr7 (373-471)||(35137532-35137640)
chr7 (374-471)||(3434562-3434669)
chr7 (374-471)||(8080376-8080483)
chr7 (374-471)||(36361906-36362013)
chr7 (374-471)||(36362026-36362133)
chr7 (373-471)||(19329841-19329949)
chr7 (373-471)||(31735883-31735984)
chr7 (375-471)||(32951486-32951592)
chr7 (377-471)||(3783998-3784102)
chr7 (374-471)||(19436180-19436287)
chr7 (374-471)||(40957707-40957814)
chr7 (429-471)||(3694432-3694474)
chr7 (374-411)||(10343626-10343663)
chr7 (374-410)||(35468919-35468955)
[»] chr4 (18 HSPs)
chr4 (374-471)||(42044360-42044467)
chr4 (361-471)||(11511455-11511575)
chr4 (374-471)||(48183042-48183149)
chr4 (372-471)||(6034042-6034151)
chr4 (369-471)||(41236342-41236454)
chr4 (374-468)||(50052424-50052528)
chr4 (374-471)||(480440-480547)
chr4 (374-471)||(29234238-29234345)
chr4 (371-471)||(54473526-54473636)
chr4 (374-471)||(24995100-24995207)
chr4 (374-468)||(29239886-29239990)
chr4 (373-468)||(3481653-3481758)
chr4 (429-471)||(41823947-41823989)
chr4 (374-469)||(23608235-23608340)
chr4 (372-429)||(50526216-50526273)
chr4 (373-429)||(40574778-40574834)
chr4 (440-471)||(31910268-31910299)
chr4 (429-471)||(53352559-53352601)
[»] chr5 (15 HSPs)
chr5 (375-469)||(36875607-36875702)
chr5 (373-471)||(33149631-33149739)
chr5 (373-471)||(40145406-40145514)
chr5 (377-469)||(18520879-18520981)
chr5 (374-471)||(2740274-2740381)
chr5 (374-471)||(36732935-36733042)
chr5 (372-471)||(35785197-35785306)
chr5 (373-471)||(42414295-42414403)
chr5 (374-467)||(13811652-13811755)
chr5 (373-469)||(14831813-14831919)
chr5 (8-55)||(38816928-38816975)
chr5 (373-471)||(28177774-28177882)
chr5 (431-471)||(31132411-31132451)
chr5 (429-464)||(31009053-31009088)
chr5 (429-471)||(15409603-15409645)
[»] chr3 (21 HSPs)
chr3 (373-471)||(53982010-53982118)
chr3 (372-471)||(33644198-33644307)
chr3 (374-471)||(49607414-49607521)
chr3 (379-471)||(52629305-52629407)
chr3 (374-468)||(8076393-8076497)
chr3 (374-471)||(17470405-17470512)
chr3 (374-467)||(27714888-27714991)
chr3 (374-471)||(54868888-54868995)
chr3 (375-471)||(31456690-31456796)
chr3 (374-429)||(11095398-11095453)
chr3 (373-471)||(26141525-26141633)
chr3 (429-471)||(48587084-48587126)
chr3 (374-429)||(33118896-33118951)
chr3 (440-471)||(41189757-41189788)
chr3 (379-429)||(26754700-26754750)
chr3 (371-429)||(30801778-30801836)
chr3 (372-426)||(45058601-45058654)
chr3 (442-471)||(51419353-51419382)
chr3 (374-426)||(14623887-14623939)
chr3 (374-426)||(24700002-24700054)
chr3 (443-471)||(47531944-47531972)
[»] chr2 (21 HSPs)
chr2 (374-471)||(17473020-17473127)
chr2 (374-469)||(7465730-7465835)
chr2 (374-468)||(33436096-33436200)
chr2 (374-471)||(9058480-9058587)
chr2 (377-469)||(28863458-28863560)
chr2 (373-471)||(13438342-13438450)
chr2 (374-471)||(10249375-10249482)
chr2 (371-471)||(40701475-40701585)
chr2 (373-471)||(28381648-28381756)
chr2 (374-471)||(5574481-5574588)
chr2 (374-471)||(30915463-30915570)
chr2 (374-471)||(32505641-32505748)
chr2 (377-471)||(19930813-19930917)
chr2 (373-468)||(27864703-27864808)
chr2 (373-471)||(40613895-40614003)
chr2 (374-471)||(38273135-38273242)
chr2 (429-468)||(20700880-20700919)
chr2 (374-426)||(33436211-33436263)
chr2 (375-415)||(41575138-41575178)
chr2 (440-471)||(42257269-42257300)
chr2 (372-471)||(4060683-4060792)
[»] chr1 (19 HSPs)
chr1 (372-471)||(9474869-9474978)
chr1 (373-471)||(47452313-47452421)
chr1 (374-471)||(2581915-2582022)
chr1 (374-471)||(3000319-3000426)
chr1 (371-471)||(48716275-48716385)
chr1 (373-471)||(27564728-27564836)
chr1 (374-471)||(38595154-38595261)
chr1 (374-471)||(38632314-38632421)
chr1 (429-471)||(44548369-44548411)
chr1 (429-471)||(50630523-50630565)
chr1 (374-471)||(8346381-8346488)
chr1 (374-471)||(32813247-32813354)
chr1 (374-471)||(41758805-41758912)
chr1 (429-471)||(43197-43239)
chr1 (429-474)||(13414826-13414871)
chr1 (374-464)||(51898683-51898783)
chr1 (119-216)||(34712091-34712189)
chr1 (370-429)||(50591045-50591104)
chr1 (373-429)||(37649197-37649253)
[»] chr8 (20 HSPs)
chr8 (373-471)||(15197332-15197440)
chr8 (373-471)||(34012289-34012397)
chr8 (374-471)||(12831047-12831154)
chr8 (373-471)||(504114-504222)
chr8 (374-471)||(14547922-14548029)
chr8 (371-471)||(40423936-40424046)
chr8 (373-471)||(23122590-23122698)
chr8 (374-471)||(1179933-1180040)
chr8 (374-471)||(44507080-44507187)
chr8 (429-468)||(8841428-8841467)
chr8 (429-468)||(10284627-10284666)
chr8 (373-468)||(20074938-20075035)
chr8 (374-464)||(37038479-37038579)
chr8 (373-471)||(43414574-43414682)
chr8 (375-468)||(5957831-5957934)
chr8 (431-471)||(9122252-9122292)
chr8 (366-469)||(15048177-15048289)
chr8 (379-471)||(10621080-10621182)
chr8 (375-413)||(9122196-9122234)
chr8 (374-415)||(4854922-4854963)
[»] chr6 (10 HSPs)
chr6 (377-471)||(22880651-22880755)
chr6 (373-471)||(32869677-32869785)
chr6 (373-471)||(17598553-17598661)
chr6 (374-471)||(6209458-6209565)
chr6 (374-471)||(29857827-29857934)
chr6 (374-471)||(11427616-11427725)
chr6 (371-471)||(31109393-31109503)
chr6 (429-471)||(23128120-23128162)
chr6 (374-471)||(31976248-31976355)
chr6 (371-429)||(15508069-15508127)
[»] scaffold0237 (1 HSPs)
scaffold0237 (374-471)||(4029-4136)
[»] scaffold1268 (1 HSPs)
scaffold1268 (373-468)||(925-1030)
[»] scaffold1267 (1 HSPs)
scaffold1267 (373-468)||(925-1030)
[»] scaffold0321 (1 HSPs)
scaffold0321 (429-471)||(10102-10144)


Alignment Details
Target: chr7 (Bit Score: 61; Significance: 5e-26; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 38837217 - 38837324
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacaca----------acgtagtcacgtggaccccgcacaagcacactttc 463  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||| |||||          |||||||||||||||||||||||||||||||||||    
T  38837217 gagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 38837316  T
Q  464 tcttttct 471  Q
    ||||||||    
T  38837317 tcttttct 38837324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 7389389 - 7389496
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttc 463  Q
    |||||||||||||||||||||||||| ||| ||||||| |||  ||||||||||||          ||||||||||||||||||||||||||||||||||    
T  7389389 gagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 7389488  T
Q  464 tcttttct 471  Q
    ||||||||    
T  7389489 tcttttct 7389496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 371 - 471
Target Start/End: Original strand, 38267037 - 38267147
Alignment:
Q  371 tttgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacact 460  Q
    ||||||||||||||||||||||||||||  ||  |||||||||||  ||||||||||||          |||||||||||||||||||||||||||||||    
T  38267037 tttgagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 38267136  T
Q  461 ttctcttttct 471  Q
    |||||||||||    
T  38267137 ttctcttttct 38267147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 63 - 130
Target Start/End: Complemental strand, 47363336 - 47363270
Alignment:
Q  63 actttgtcatttcgtcaatctccacaagctccaaagtttgtggctgaagcaaaagcatctcagactat 130  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  47363336 actttgttatttcgtca-tctccacaagctccaaagtttgtggctgaagcaaaagcatctctgactat 47363270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 374 - 469
Target Start/End: Complemental strand, 4999614 - 4999509
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacaca----------acgtagtcacgtggaccccgcacaagcacactttc 463  Q
    |||||||||||||||||||||||||||||| |||||||| ||  |||||||||||          ||||||||||||||||||||||||| |||||||||    
T  4999614 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacacactttc 4999515  T
Q  464 tctttt 469  Q
    ||||||    
T  4999514 tctttt 4999509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 374 - 468
Target Start/End: Original strand, 11044188 - 11044282
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaacgtagtcacgtggaccccgcacaagcacactttctcttt 468  Q
    |||||||||||||||||||||||||| ||| |||||| ||||  ||||||     |||||||||||||||||||||||||| |||||||||||||    
T  11044188 gagtaatgatacatagacacccttaggtggcaatacatcctttgacacccctgacacgtagtcacgtggaccccgcacaagtacactttctcttt 11044282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 373 - 471
Target Start/End: Original strand, 35137532 - 35137640
Alignment:
Q  373 tgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacacttt 462  Q
    |||||||||||| |||||||||||||| ||| |||||||||||  ||||||||||||          |||||||||||||||||||||||| ||||||||    
T  35137532 tgagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacacacttt 35137631  T
Q  463 ctcttttct 471  Q
    |||||||||    
T  35137632 ctcttttct 35137640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 3434562 - 3434669
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttc 463  Q
    ||||||||||||||||||| |||||| ||| |||||||||||  ||||||||||||          |||||||||||||| |||||||||||||||||||    
T  3434562 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcacactttc 3434661  T
Q  464 tcttttct 471  Q
    ||||||||    
T  3434662 tcttttct 3434669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 374 - 471
Target Start/End: Complemental strand, 8080483 - 8080376
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttc 463  Q
    |||||||||||||||||||||||||| ||| |||||||||||  ||||| ||| ||          ||||||||||||||||||||||||||||||||||    
T  8080483 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 8080384  T
Q  464 tcttttct 471  Q
    ||||||||    
T  8080383 tcttttct 8080376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 374 - 471
Target Start/End: Complemental strand, 36362013 - 36361906
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttc 463  Q
    |||||||||||||||||||||||||| ||| |||||| ||||  ||||||||||||          |||||||||||||||||| |||||||||||||||    
T  36362013 gagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 36361914  T
Q  464 tcttttct 471  Q
    ||||||||    
T  36361913 tcttttct 36361906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 36362026 - 36362133
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttc 463  Q
    |||||||||||||||||||||||||| ||| |||||| ||||  ||||||||||||          |||||||||||||||||| |||||||||||||||    
T  36362026 gagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 36362125  T
Q  464 tcttttct 471  Q
    ||||||||    
T  36362126 tcttttct 36362133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 373 - 471
Target Start/End: Original strand, 19329841 - 19329949
Alignment:
Q  373 tgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacacttt 462  Q
    |||||||||||||||||||| |||||| ||| |||||||| ||  ||||||||||||          |||| ||||||||||||||||||||||||||||    
T  19329841 tgagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacacttt 19329940  T
Q  463 ctcttttct 471  Q
    |||||||||    
T  19329941 ctcttttct 19329949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 373 - 471
Target Start/End: Original strand, 31735883 - 31735984
Alignment:
Q  373 tgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacaca---acgtagtcacgtggaccccgcacaagcacactttctctttt 469  Q
    ||||| |||||||||||||| |||||| ||| ||||||| |||  |||||||||||   |||| | ||| |||| |||||||||||||||||||||||||    
T  31735883 tgagttatgatacatagacatccttaggtggcaatacactctttaacacccacacaaacacgtggccacatggatcccgcacaagcacactttctctttt 31735982  T
Q  470 ct 471  Q
    ||    
T  31735983 ct 31735984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 375 - 471
Target Start/End: Complemental strand, 32951592 - 32951486
Alignment:
Q  375 agtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttct 464  Q
    ||||||||||||||||||| ||||||||  |||||| ||||  ||| ||||||||          |||||||||||||||||||||||||||||||||||    
T  32951592 agtaatgatacatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttct 32951493  T
Q  465 cttttct 471  Q
    |||||||    
T  32951492 cttttct 32951486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 377 - 471
Target Start/End: Original strand, 3783998 - 3784102
Alignment:
Q  377 taatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttctct 466  Q
    ||||||||||||||||||||||| ||| |||||| | ||  ||||||||||||          |||||||||||||| ||||||||||||||||||||||    
T  3783998 taatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctct 3784097  T
Q  467 tttct 471  Q
    |||||    
T  3784098 tttct 3784102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 374 - 471
Target Start/End: Complemental strand, 19436287 - 19436180
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttc 463  Q
    ||||||||||||||||||| |||||| ||  |||||||| ||  ||||||||||||          |||||||||||||| |||||| ||||||||||||    
T  19436287 gagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcacactttc 19436188  T
Q  464 tcttttct 471  Q
    ||||||||    
T  19436187 tcttttct 19436180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 40957707 - 40957814
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttc 463  Q
    |||||||||||||||||||| ||||| ||| ||||||| |||  | ||||||||||          |||||||||||||| |||| ||||||||||||||    
T  40957707 gagtaatgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcacactttc 40957806  T
Q  464 tcttttct 471  Q
    ||||||||    
T  40957807 tcttttct 40957814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 429 - 471
Target Start/End: Original strand, 3694432 - 3694474
Alignment:
Q  429 acgtagtcacgtggaccccgcacaagcacactttctcttttct 471  Q
    ||||||||| ||||| |||||||||||||||||||||||||||    
T  3694432 acgtagtcatgtggatcccgcacaagcacactttctcttttct 3694474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 411
Target Start/End: Complemental strand, 10343663 - 10343626
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacac 411  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  10343663 gagtaatgatacatagacacccttaggtggaaatacac 10343626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 410
Target Start/End: Complemental strand, 35468955 - 35468919
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaataca 410  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  35468955 gagtaatgatacatagacatccttagatggcaataca 35468919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 5e-26; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 374 - 471
Target Start/End: Complemental strand, 42044467 - 42044360
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacaca----------acgtagtcacgtggaccccgcacaagcacactttc 463  Q
    |||||||||||||||||||||||||| ||| |||||| |||||||||||||||||          |||||||||||||||||||||||||||||||||||    
T  42044467 gagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 42044368  T
Q  464 tcttttct 471  Q
    ||||||||    
T  42044367 tcttttct 42044360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 361 - 471
Target Start/End: Complemental strand, 11511575 - 11511455
Alignment:
Q  361 attaaaattatttgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgca 450  Q
    |||| |||| ||||||||||||||||||||||||||||| ||| |||||||||||  ||||||||| ||          |||||||||||||||||||||    
T  11511575 attataattttttgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgca 11511476  T
Q  451 caagcacactttctcttttct 471  Q
    |||||||||||||||||||||    
T  11511475 caagcacactttctcttttct 11511455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 374 - 471
Target Start/End: Complemental strand, 48183149 - 48183042
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttc 463  Q
    |||||||||||||||||||||||||  ||| |||||||||||  ||||||||||||          ||||||||||||||||||||||||||||||||||    
T  48183149 gagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 48183050  T
Q  464 tcttttct 471  Q
    ||||||||    
T  48183049 tcttttct 48183042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 372 - 471
Target Start/End: Original strand, 6034042 - 6034151
Alignment:
Q  372 ttgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacaca----------acgtagtcacgtggaccccgcacaagcacactt 461  Q
    |||||||||||||||||||||||||||| ||| |||||||||||  |||||||||||          | ||||||||||||| |||||||||||||||||    
T  6034042 ttgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactt 6034141  T
Q  462 tctcttttct 471  Q
    ||||||||||    
T  6034142 tctcttttct 6034151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 369 - 471
Target Start/End: Original strand, 41236342 - 41236454
Alignment:
Q  369 tatttgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcaca 458  Q
    |||| |||||||||||||||||||||||||| ||| |||||||| ||  ||| ||||||||          |||||||||||||||||||||||||||||    
T  41236342 tattcgagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 41236441  T
Q  459 ctttctcttttct 471  Q
    |||||||||||||    
T  41236442 ctttctcttttct 41236454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 374 - 468
Target Start/End: Complemental strand, 50052528 - 50052424
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttc 463  Q
    ||||||||||||||||||| |||||| ||| |||||||||||  ||||||||||||          ||||||||||||||||||||||||||||||||||    
T  50052528 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 50052429  T
Q  464 tcttt 468  Q
    |||||    
T  50052428 tcttt 50052424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 374 - 471
Target Start/End: Complemental strand, 480547 - 480440
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttc 463  Q
    |||||||||||||||||||||||||| ||  |||||||||||  ||||||||||||          ||||||||||||||||||| ||||||||||||||    
T  480547 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 480448  T
Q  464 tcttttct 471  Q
    ||||||||    
T  480447 tcttttct 480440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 374 - 471
Target Start/End: Complemental strand, 29234345 - 29234238
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttc 463  Q
    |||||||||||||||||||||||||||||| |||||||||||  | |||  |||||          ||||||||||||||||||||||||||||||||||    
T  29234345 gagtaatgatacatagacacccttagatggcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 29234246  T
Q  464 tcttttct 471  Q
    ||||||||    
T  29234245 tcttttct 29234238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 371 - 471
Target Start/End: Complemental strand, 54473636 - 54473526
Alignment:
Q  371 tttgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacact 460  Q
    ||||||||||||||||||||||||||||| ||  |||||||| ||  ||||||||||||          |||||||||||||||||||||||||||||||    
T  54473636 tttgagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacact 54473537  T
Q  461 ttctcttttct 471  Q
    || ||||||||    
T  54473536 ttatcttttct 54473526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 374 - 471
Target Start/End: Complemental strand, 24995207 - 24995100
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttc 463  Q
    ||||||||||| || ||||||||||||||| |||||||||||  ||||||||| ||          ||||||||||||||||||||||||||||| ||||    
T  24995207 gagtaatgatatatggacacccttagatggcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcacattttc 24995108  T
Q  464 tcttttct 471  Q
    ||||||||    
T  24995107 tcttttct 24995100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 374 - 468
Target Start/End: Original strand, 29239886 - 29239990
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttc 463  Q
    |||||||||||||||||||||||||| ||| |||||||| ||  ||| ||||||||          |||||||||||||||||| |||||||||||||||    
T  29239886 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacactttc 29239985  T
Q  464 tcttt 468  Q
    |||||    
T  29239986 tcttt 29239990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 373 - 468
Target Start/End: Original strand, 3481653 - 3481758
Alignment:
Q  373 tgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacaca----------acgtagtcacgtggaccccgcacaagcacacttt 462  Q
    |||||||||||||||||||||| |||| ||| ||||||| |||  |||||||||||          || |||||||||||||||| ||||||||||||||    
T  3481653 tgagtaatgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcacacttt 3481752  T
Q  463 ctcttt 468  Q
    ||||||    
T  3481753 ctcttt 3481758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 429 - 471
Target Start/End: Original strand, 41823947 - 41823989
Alignment:
Q  429 acgtagtcacgtggaccccgcacaagcacactttctcttttct 471  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  41823947 acgtagtcacatggaccccgcacaagcacactttctcttttct 41823989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 469
Target Start/End: Original strand, 23608235 - 23608340
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacaca----------acgtagtcacgtggaccccgcacaagcacactttc 463  Q
    ||||||||||| |||||||||||||||||  |||||||| ||  |||||||||||          ||||||||||||| || || |||||||||||||||    
T  23608235 gagtaatgatatatagacacccttagatgacaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcacactttc 23608334  T
Q  464 tctttt 469  Q
    ||||||    
T  23608335 tctttt 23608340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 372 - 429
Target Start/End: Complemental strand, 50526273 - 50526216
Alignment:
Q  372 ttgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa 429  Q
    ||||||||||||||||||||| | |||| ||| |||||||||||  ||||||||||||    
T  50526273 ttgagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaa 50526216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 429
Target Start/End: Original strand, 40574778 - 40574834
Alignment:
Q  373 tgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa 429  Q
    ||||| |||||||||||||| |||||| ||| |||||||||||  ||||||||||||    
T  40574778 tgagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaa 40574834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 471
Target Start/End: Original strand, 31910268 - 31910299
Alignment:
Q  440 tggaccccgcacaagcacactttctcttttct 471  Q
    ||||||||||||||||||||||||||||||||    
T  31910268 tggaccccgcacaagcacactttctcttttct 31910299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 429 - 471
Target Start/End: Complemental strand, 53352601 - 53352559
Alignment:
Q  429 acgtagtcacgtggaccccgcacaagcacactttctcttttct 471  Q
    ||||||| | |||||||||||||||||| ||||||||||||||    
T  53352601 acgtagttaagtggaccccgcacaagcatactttctcttttct 53352559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 2e-25; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 375 - 469
Target Start/End: Complemental strand, 36875702 - 36875607
Alignment:
Q  375 agtaatgatacatagacacccttagatgggaatacacccttgtacacccacac-aacgtagtcacgtggaccccgcacaagcacactttctctttt 469  Q
    ||||||||||||||||||||||||| ||| |||||||||||  |||||||||| ||  |||||||||||| |||||||||||||||||||||||||    
T  36875702 agtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatagtcacgtggatcccgcacaagcacactttctctttt 36875607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 373 - 471
Target Start/End: Complemental strand, 33149739 - 33149631
Alignment:
Q  373 tgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacaca----------acgtagtcacgtggaccccgcacaagcacacttt 462  Q
    ||||||||||||||||||||||||||| ||| |||||||||||  |||||||||||          ||||||||||||||| ||||||||||||||||||    
T  33149739 tgagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacacttt 33149640  T
Q  463 ctcttttct 471  Q
    |||||||||    
T  33149639 ctcttttct 33149631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 373 - 471
Target Start/End: Original strand, 40145406 - 40145514
Alignment:
Q  373 tgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacacttt 462  Q
    ||||||||||||||||||||||||||| ||| |||||||||||  ||| ||||||||          |||||||||||||||||||||||||||||||||    
T  40145406 tgagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 40145505  T
Q  463 ctcttttct 471  Q
    |||||||||    
T  40145506 ctcttttct 40145514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 377 - 469
Target Start/End: Complemental strand, 18520981 - 18520879
Alignment:
Q  377 taatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttctct 466  Q
    ||||||||||||||||||||||| ||| |||||||||||  ||||||||||||          |||||||||||||||||||||||||||||||||||||    
T  18520981 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 18520882  T
Q  467 ttt 469  Q
    |||    
T  18520881 ttt 18520879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 2740274 - 2740381
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttc 463  Q
    ||||||||||||||||||| |||||| ||| |||||||||||  ||||||||||||          |||||||||||||| |||||||||||||||||||    
T  2740274 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 2740373  T
Q  464 tcttttct 471  Q
    ||||||||    
T  2740374 tcttttct 2740381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 374 - 471
Target Start/End: Complemental strand, 36733042 - 36732935
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttc 463  Q
    |||||||||||||||||||||||||| | | |||||||||||  ||||||||||||          | ||||||||||||||||||||||||||||||||    
T  36733042 gagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcacactttc 36732943  T
Q  464 tcttttct 471  Q
    ||||||||    
T  36732942 tcttttct 36732935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 372 - 471
Target Start/End: Original strand, 35785197 - 35785306
Alignment:
Q  372 ttgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacaca----------acgtagtcacgtggaccccgcacaagcacactt 461  Q
    |||||||||||||||||||||||||||| ||| |||||||| ||  |||||||||||          ||||||| ||||||| ||||||||| |||||||    
T  35785197 ttgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcacactt 35785296  T
Q  462 tctcttttct 471  Q
    ||||||||||    
T  35785297 tctcttttct 35785306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 373 - 471
Target Start/End: Complemental strand, 42414403 - 42414295
Alignment:
Q  373 tgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacacttt 462  Q
    ||||||||||||||||||||||  ||| ||| |||||||||||  ||||||||||||          |||||||| ||||||||||||||||||||||||    
T  42414403 tgagtaatgatacatagacaccagtaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacacttt 42414304  T
Q  463 ctcttttct 471  Q
     ||||||||    
T  42414303 atcttttct 42414295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 374 - 467
Target Start/End: Original strand, 13811652 - 13811755
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttc 463  Q
    |||||| ||||||||||||||||||| ||| |||||| | ||  ||||||||||||          ||||||||||||||||||||||||||||||||||    
T  13811652 gagtaaagatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 13811751  T
Q  464 tctt 467  Q
    ||||    
T  13811752 tctt 13811755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 373 - 469
Target Start/End: Original strand, 14831813 - 14831919
Alignment:
Q  373 tgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacaca----------acgtagtcacgtggaccccgcacaagcacacttt 462  Q
    ||||||||||||||||||||| ||||| ||| |||||||||||  ||||||||| |          ||||||||||||||| ||||||||||||||||||    
T  14831813 tgagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 14831912  T
Q  463 ctctttt 469  Q
    || ||||    
T  14831913 ctttttt 14831919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 38816928 - 38816975
Alignment:
Q  8 tgttgaagatcaatcaatagttttgggtcatcttcttttaccaacaaa 55  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||    
T  38816928 tgttgaagatcaaccaatagttttgggtcatcttctttcaccaacaaa 38816975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 373 - 471
Target Start/End: Original strand, 28177774 - 28177882
Alignment:
Q  373 tgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacaca----------acgtagtcacgtggaccccgcacaagcacacttt 462  Q
    ||||| |||||||||||||| |||||| ||| |||||||||||  |||||||||||          |||| ||||| |||||||||||||| ||||||||    
T  28177774 tgagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacacttt 28177873  T
Q  463 ctcttttct 471  Q
    |||||||||    
T  28177874 ctcttttct 28177882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 431 - 471
Target Start/End: Original strand, 31132411 - 31132451
Alignment:
Q  431 gtagtcacgtggaccccgcacaagcacactttctcttttct 471  Q
    |||||||||||||||||||||||||| ||||| ||||||||    
T  31132411 gtagtcacgtggaccccgcacaagcatactttttcttttct 31132451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 429 - 464
Target Start/End: Original strand, 31009053 - 31009088
Alignment:
Q  429 acgtagtcacgtggaccccgcacaagcacactttct 464  Q
    ||||||||||||||| ||||||||||||||||||||    
T  31009053 acgtagtcacgtggatcccgcacaagcacactttct 31009088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 429 - 471
Target Start/End: Complemental strand, 15409645 - 15409603
Alignment:
Q  429 acgtagtcacgtggaccccgcacaagcacactttctcttttct 471  Q
    |||||| ||| ||||||||||||||||||||| ||||||||||    
T  15409645 acgtagccacatggaccccgcacaagcacactctctcttttct 15409603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 3e-24; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 373 - 471
Target Start/End: Original strand, 53982010 - 53982118
Alignment:
Q  373 tgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacacttt 462  Q
    ||||||||||||||||||||||||||| ||| |||||||||||  ||||||||||||          |||||||||||||||||||||||||||||||||    
T  53982010 tgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 53982109  T
Q  463 ctcttttct 471  Q
    |||||||||    
T  53982110 ctcttttct 53982118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 372 - 471
Target Start/End: Original strand, 33644198 - 33644307
Alignment:
Q  372 ttgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactt 461  Q
    |||||||||||||||||||||||||| | ||| |||||||||||  ||||||||||||          ||||||||||||||||||||||||||||||||    
T  33644198 ttgagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 33644297  T
Q  462 tctcttttct 471  Q
    ||||||||||    
T  33644298 tctcttttct 33644307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 49607414 - 49607521
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacaca----------acgtagtcacgtggaccccgcacaagcacactttc 463  Q
    |||||||||||||||||||||||||| ||| |||||||||||  |||||||||||          ||||||||||||||| ||| |||||||||||||||    
T  49607414 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactttc 49607513  T
Q  464 tcttttct 471  Q
    ||||||||    
T  49607514 tcttttct 49607521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 379 - 471
Target Start/End: Original strand, 52629305 - 52629407
Alignment:
Q  379 atgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttctcttt 468  Q
    ||||||||||||||||||||| ||| |||||||||||  ||||||||||||          ||||||||||||||||||| |||||||||||||||||||    
T  52629305 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctcttt 52629404  T
Q  469 tct 471  Q
    |||    
T  52629405 tct 52629407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 374 - 468
Target Start/End: Original strand, 8076393 - 8076497
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttc 463  Q
    ||||||||||||||| |||||||||| ||| | |||||||||  ||||||||||||          ||||||||||||||||||||||||||||||||||    
T  8076393 gagtaatgatacataaacacccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttc 8076492  T
Q  464 tcttt 468  Q
    |||||    
T  8076493 tcttt 8076497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 17470405 - 17470512
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttc 463  Q
    ||||||||||||||||||||| |||| ||| |||||||| ||  ||||||||||||          |||||||||||||||||| |||||||||||||||    
T  17470405 gagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 17470504  T
Q  464 tcttttct 471  Q
    ||||||||    
T  17470505 tcttttct 17470512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 374 - 467
Target Start/End: Complemental strand, 27714991 - 27714888
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacaca----------acgtagtcacgtggaccccgcacaagcacactttc 463  Q
    ||||||||||||||||||||| |||| ||| |||||||||||  |||||||||||          ||||||||| |||||||||||||||||||||||||    
T  27714991 gagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttc 27714892  T
Q  464 tctt 467  Q
    ||||    
T  27714891 tctt 27714888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 374 - 471
Target Start/End: Complemental strand, 54868995 - 54868888
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacaca----------acgtagtcacgtggaccccgcacaagcacactttc 463  Q
    |||||||||||||||||||||||||| ||| |||||||| ||  |||||||||||          ||||||| ||||||||||||||||| |||||||||    
T  54868995 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttc 54868896  T
Q  464 tcttttct 471  Q
    ||||||||    
T  54868895 tcttttct 54868888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 375 - 471
Target Start/End: Original strand, 31456690 - 31456796
Alignment:
Q  375 agtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttct 464  Q
    ||||||||||||||||||||| |||  || |||||||||||  ||||||||||||          |||||||| ||||||||||||||||||||||||||    
T  31456690 agtaatgatacatagacacccataggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttct 31456789  T
Q  465 cttttct 471  Q
    |||||||    
T  31456790 cttttct 31456796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 429
Target Start/End: Complemental strand, 11095453 - 11095398
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa 429  Q
    |||||||||||||||||||||||||| ||| |||||||||||  ||||||||||||    
T  11095453 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaa 11095398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 373 - 471
Target Start/End: Complemental strand, 26141633 - 26141525
Alignment:
Q  373 tgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacaca----------acgtagtcacgtggaccccgcacaagcacacttt 462  Q
    ||||| |||||||||||||| |||||| ||| |||||||||||  |||||||||||          |||| ||||| |||||||| ||||||||||||||    
T  26141633 tgagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcacacttt 26141534  T
Q  463 ctcttttct 471  Q
    |||||||||    
T  26141533 ctcttttct 26141525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 429 - 471
Target Start/End: Complemental strand, 48587126 - 48587084
Alignment:
Q  429 acgtagtcacgtggaccccgcacaagcacactttctcttttct 471  Q
    ||||||||||||||| |||||||||| ||||||||||||||||    
T  48587126 acgtagtcacgtggatcccgcacaagtacactttctcttttct 48587084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 429
Target Start/End: Complemental strand, 33118951 - 33118896
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa 429  Q
    |||| ||||||||||||||||||||| ||  |||||||||||  ||||||||||||    
T  33118951 gagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaa 33118896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 471
Target Start/End: Complemental strand, 41189788 - 41189757
Alignment:
Q  440 tggaccccgcacaagcacactttctcttttct 471  Q
    ||||||||||||||||||||||||||||||||    
T  41189788 tggaccccgcacaagcacactttctcttttct 41189757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 379 - 429
Target Start/End: Original strand, 26754700 - 26754750
Alignment:
Q  379 atgatacatagacacccttagatgggaatacacccttgtacacccacacaa 429  Q
    ||||| ||||||||||||||| ||| |||||||||||| ||| ||||||||    
T  26754700 atgattcatagacacccttaggtggcaatacacccttggacatccacacaa 26754750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 429
Target Start/End: Complemental strand, 30801836 - 30801778
Alignment:
Q  371 tttgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa 429  Q
    |||||| |||||||||||||||||||||| ||  |||||||||||  | ||||||||||    
T  30801836 tttgagcaatgatacatagacacccttaggtgataatacaccctttgatacccacacaa 30801778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 426
Target Start/End: Complemental strand, 45058654 - 45058601
Alignment:
Q  372 ttgagtaatgatacatagacacccttagatgggaatacacccttgtacacccaca 426  Q
    |||||| |||||||||| |||||||||| ||| |||||||||||| |||||||||    
T  45058654 ttgagttatgatacataaacacccttaggtggcaatacacccttg-acacccaca 45058601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 471
Target Start/End: Complemental strand, 51419382 - 51419353
Alignment:
Q  442 gaccccgcacaagcacactttctcttttct 471  Q
    ||||||||||||||||||||||||||||||    
T  51419382 gaccccgcacaagcacactttctcttttct 51419353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 426
Target Start/End: Complemental strand, 14623939 - 14623887
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccaca 426  Q
    ||||||||||||||||||| |||||| ||| ||||||||| |  |||||||||    
T  14623939 gagtaatgatacatagacatccttaggtggcaatacaccccttgacacccaca 14623887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 426
Target Start/End: Complemental strand, 24700054 - 24700002
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccaca 426  Q
    ||||||||||||||||||| |||||| ||| |||||||| ||  |||||||||    
T  24700054 gagtaatgatacatagacatccttagttggcaatacaccttttgacacccaca 24700002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 471
Target Start/End: Original strand, 47531944 - 47531972
Alignment:
Q  443 accccgcacaagcacactttctcttttct 471  Q
    |||||||||||||||||||||||||||||    
T  47531944 accccgcacaagcacactttctcttttct 47531972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 1e-23; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 17473020 - 17473127
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacaca----------acgtagtcacgtggaccccgcacaagcacactttc 463  Q
    |||||||||||||||||||||||||||||| |||||||||||  |||||||||||          ||||||||||||||| |||||||||||||||||||    
T  17473020 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 17473119  T
Q  464 tcttttct 471  Q
    ||||||||    
T  17473120 tcttttct 17473127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 374 - 469
Target Start/End: Complemental strand, 7465835 - 7465730
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacaca----------acgtagtcacgtggaccccgcacaagcacactttc 463  Q
    |||||||||||||||||||||||||||||| |||||||||||  |||||||||||          ||||||||||||||||||| |||||||||||||||    
T  7465835 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 7465736  T
Q  464 tctttt 469  Q
    ||||||    
T  7465735 tctttt 7465730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 374 - 468
Target Start/End: Complemental strand, 33436200 - 33436096
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttc 463  Q
    |||||||||||||||||||||||||| ||| |||||||||||  ||||||||||||          ||||||||||||||||||||||||||||||||||    
T  33436200 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttc 33436101  T
Q  464 tcttt 468  Q
    |||||    
T  33436100 tcttt 33436096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 9058480 - 9058587
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacaca----------acgtagtcacgtggaccccgcacaagcacactttc 463  Q
    |||||||||||||||||||||||||| ||| |||||||||||  |||||||||||          ||||||||| |||||||||||||||||||||||||    
T  9058480 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttc 9058579  T
Q  464 tcttttct 471  Q
    ||||||||    
T  9058580 tcttttct 9058587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 377 - 469
Target Start/End: Original strand, 28863458 - 28863560
Alignment:
Q  377 taatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttctct 466  Q
    ||||||||||||||||||||||| ||| |||||||||||  ||||||||||||          |||||||||||||||||||||||||||||||||||||    
T  28863458 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 28863557  T
Q  467 ttt 469  Q
    |||    
T  28863558 ttt 28863560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 373 - 471
Target Start/End: Original strand, 13438342 - 13438450
Alignment:
Q  373 tgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacacttt 462  Q
    ||||||||||||||||||||||||||| ||  |||||| ||||  ||||||||||||          |||||||||||||||||||||||||||||||||    
T  13438342 tgagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 13438441  T
Q  463 ctcttttct 471  Q
    |||||||||    
T  13438442 ctcttttct 13438450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 374 - 471
Target Start/End: Complemental strand, 10249482 - 10249375
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttc 463  Q
    |||||||||||||||||||||||||| ||  |||||||| ||  ||||||||||||          ||||||||||||||||||||||||||||||||||    
T  10249482 gagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 10249383  T
Q  464 tcttttct 471  Q
    ||||||||    
T  10249382 tcttttct 10249375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 371 - 471
Target Start/End: Original strand, 40701475 - 40701585
Alignment:
Q  371 tttgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacaca----------acgtagtcacgtggaccccgcacaagcacact 460  Q
    ||||||||||||||||||||||||||||| ||| |||||||| ||  |||||||||||          ||||||| ||||||||||||||||| ||||||    
T  40701475 tttgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacact 40701574  T
Q  461 ttctcttttct 471  Q
    |||||||||||    
T  40701575 ttctcttttct 40701585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 373 - 471
Target Start/End: Complemental strand, 28381756 - 28381648
Alignment:
Q  373 tgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacaca----------acgtagtcacgtggaccccgcacaagcacacttt 462  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||  |||||||||||          |||||||||| ||||| |||||||||||||||||    
T  28381756 tgagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcacacttt 28381657  T
Q  463 ctcttttct 471  Q
    |||||||||    
T  28381656 ctcttttct 28381648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 374 - 471
Target Start/End: Complemental strand, 5574588 - 5574481
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttc 463  Q
    |||||||||||||||||||| ||||| ||| |||||||||||  ||||||||| ||          |||||||||||||| |||||||||||||||||||    
T  5574588 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 5574489  T
Q  464 tcttttct 471  Q
    ||||||||    
T  5574488 tcttttct 5574481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 30915463 - 30915570
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttc 463  Q
    |||||||||||||||||||||||||| ||| |||||||||||  || |||||| ||          ||||||||||||||||||| ||||||||||||||    
T  30915463 gagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 30915562  T
Q  464 tcttttct 471  Q
    ||||||||    
T  30915563 tcttttct 30915570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 374 - 471
Target Start/End: Complemental strand, 32505748 - 32505641
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttc 463  Q
    |||||||||||||||||||||||||| ||  |||||||| ||  ||||||||||||          ||||||||||||||||||||||||||||||||||    
T  32505748 gagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 32505649  T
Q  464 tcttttct 471  Q
    | ||||||    
T  32505648 tattttct 32505641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 377 - 471
Target Start/End: Complemental strand, 19930917 - 19930813
Alignment:
Q  377 taatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttctct 466  Q
    ||||||||||||||||||||||| ||| |||||||||||  ||| ||||||||          |||||||| ||||||||||||||| ||||||||||||    
T  19930917 taatgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacacactttctct 19930818  T
Q  467 tttct 471  Q
    |||||    
T  19930817 tttct 19930813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 373 - 468
Target Start/End: Original strand, 27864703 - 27864808
Alignment:
Q  373 tgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacaca----------acgtagtcacgtggaccccgcacaagcacacttt 462  Q
    ||||||||||||||||||||||||||  ||| |||||||||||  ||| |||||||          ||||| |||||||||||||||| |||||||||||    
T  27864703 tgagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcacacttt 27864802  T
Q  463 ctcttt 468  Q
    ||||||    
T  27864803 ctcttt 27864808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 373 - 471
Target Start/End: Complemental strand, 40614003 - 40613895
Alignment:
Q  373 tgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacaca----------acgtagtcacgtggaccccgcacaagcacacttt 462  Q
    ||||| |||||||||||||| |||||| ||| |||||||||||  |||||||||||          |||| | ||| |||||||||||||||||||||||    
T  40614003 tgagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacacttt 40613904  T
Q  463 ctcttttct 471  Q
    |||||||||    
T  40613903 ctcttttct 40613895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 374 - 471
Target Start/End: Complemental strand, 38273242 - 38273135
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacaca----------acgtagtcacgtggaccccgcacaagcacactttc 463  Q
    |||| ||||||||||||||  ||||||||| |||||||||||  |||||||||||          |||||| ||| |||||||||||| |||||||||||    
T  38273242 gagttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactagcacactttc 38273143  T
Q  464 tcttttct 471  Q
    ||||||||    
T  38273142 tcttttct 38273135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 429 - 468
Target Start/End: Original strand, 20700880 - 20700919
Alignment:
Q  429 acgtagtcacgtggaccccgcacaagcacactttctcttt 468  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  20700880 acgtagtcacgtggaccccgcataagcacactttctcttt 20700919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 374 - 426
Target Start/End: Original strand, 33436211 - 33436263
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccaca 426  Q
    ||||||||||||||||||| |||||||||| |||||||| ||  |||||||||    
T  33436211 gagtaatgatacatagacatccttagatggcaatacaccttttgacacccaca 33436263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 375 - 415
Target Start/End: Original strand, 41575138 - 41575178
Alignment:
Q  375 agtaatgatacatagacacccttagatgggaatacaccctt 415  Q
    |||||||||||||||||| |||||||||| |||||||||||    
T  41575138 agtaatgatacatagacatccttagatggtaatacaccctt 41575178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 471
Target Start/End: Original strand, 42257269 - 42257300
Alignment:
Q  440 tggaccccgcacaagcacactttctcttttct 471  Q
    ||||||||||||||||||||||||||||||||    
T  42257269 tggaccccgcacaagcacactttctcttttct 42257300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 471
Target Start/End: Original strand, 4060683 - 4060792
Alignment:
Q  372 ttgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacaca----------acgtagtcacgtggaccccgcacaagcacactt 461  Q
    |||||||||||||||||||||||||||| ||  |||||||| ||  ||| |||||||          ||||||| ||||||| |||||| ||||||||||    
T  4060683 ttgagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactt 4060782  T
Q  462 tctcttttct 471  Q
    ||| ||||||    
T  4060783 tcttttttct 4060792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 2e-22; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 372 - 471
Target Start/End: Complemental strand, 9474978 - 9474869
Alignment:
Q  372 ttgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacaca----------acgtagtcacgtggaccccgcacaagcacactt 461  Q
    |||||||||||||||||||||||||||| ||| |||||||||||  |||||||||||          ||||||||||||||||||||||||| |||||||    
T  9474978 ttgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacacactt 9474879  T
Q  462 tctcttttct 471  Q
    ||||||||||    
T  9474878 tctcttttct 9474869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 373 - 471
Target Start/End: Complemental strand, 47452421 - 47452313
Alignment:
Q  373 tgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacaca----------acgtagtcacgtggaccccgcacaagcacacttt 462  Q
    ||||||||||||||||||||||||||| ||| |||||||||||  |||||||||||          ||||||||||||||| ||||||||||||||||||    
T  47452421 tgagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcacacttt 47452322  T
Q  463 ctcttttct 471  Q
    |||||||||    
T  47452321 ctcttttct 47452313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 2581915 - 2582022
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacaca----------acgtagtcacgtggaccccgcacaagcacactttc 463  Q
    |||||||||||||||||||||||||| ||| |||||||||||  |||||||||||          |||||||||||||||||||||||||||||||||||    
T  2581915 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 2582014  T
Q  464 tcttttct 471  Q
    | ||||||    
T  2582015 ttttttct 2582022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 3000319 - 3000426
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttc 463  Q
    ||||||||||||||| |||||||||| ||| |||||||||||  ||||||||||||          ||||||||||||||||||| ||||||||||||||    
T  3000319 gagtaatgatacataaacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 3000418  T
Q  464 tcttttct 471  Q
    ||||||||    
T  3000419 tcttttct 3000426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 371 - 471
Target Start/End: Complemental strand, 48716385 - 48716275
Alignment:
Q  371 tttgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacact 460  Q
    ||||||||||||||||||||||||||||| ||| |||||||| ||  ||| ||||||||          |||||||||||||||||||||||||||||||    
T  48716385 tttgagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 48716286  T
Q  461 ttctcttttct 471  Q
    || ||||||||    
T  48716285 ttatcttttct 48716275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 373 - 471
Target Start/End: Complemental strand, 27564836 - 27564728
Alignment:
Q  373 tgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacacttt 462  Q
    |||||||||||||||||||| |||||| ||| |||||||| ||  ||||||||||||          |||| ||||||||||||||||||||||||||||    
T  27564836 tgagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacacttt 27564737  T
Q  463 ctcttttct 471  Q
    |||||||||    
T  27564736 ctcttttct 27564728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 38595154 - 38595261
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttc 463  Q
    ||||||||||||||| ||||| |||| ||| |||||||||||  ||||||||||||          ||||||||||||||||||| ||||||||||||||    
T  38595154 gagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 38595253  T
Q  464 tcttttct 471  Q
    ||||||||    
T  38595254 tcttttct 38595261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 374 - 471
Target Start/End: Complemental strand, 38632421 - 38632314
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttc 463  Q
    |||||||||||||||||||||||||| ||| |||||||| ||  ||| ||||||||          |||||||||||||||||||||||||||||||||     
T  38632421 gagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttt 38632322  T
Q  464 tcttttct 471  Q
    ||||||||    
T  38632321 tcttttct 38632314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 429 - 471
Target Start/End: Complemental strand, 44548411 - 44548369
Alignment:
Q  429 acgtagtcacgtggaccccgcacaagcacactttctcttttct 471  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  44548411 acgtagtcacgtggaccccgcacaagcacactttctcttttct 44548369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 429 - 471
Target Start/End: Original strand, 50630523 - 50630565
Alignment:
Q  429 acgtagtcacgtggaccccgcacaagcacactttctcttttct 471  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  50630523 acgtagtcacgtggaccccgcacaagcacactttctcttttct 50630565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 374 - 471
Target Start/End: Complemental strand, 8346488 - 8346381
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttc 463  Q
    |||||||||||||||| |||| |||| ||| |||||||| ||  ||||||||||||          ||||||||||||||||| ||||||||||||||||    
T  8346488 gagtaatgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcacactttc 8346389  T
Q  464 tcttttct 471  Q
    ||||||||    
T  8346388 tcttttct 8346381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 32813247 - 32813354
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttc 463  Q
    |||| |||||||||||||| |||||| ||| |||||||||||  ||||||||||||          ||| ||||| ||||||||||||||||||||||||    
T  32813247 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcacactttc 32813346  T
Q  464 tcttttct 471  Q
    ||||||||    
T  32813347 tcttttct 32813354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 41758805 - 41758912
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttc 463  Q
    ||||||||||||||||||||| ||| |||| |||||||||||  ||| ||||||||          ||||||||| |||||||||||||| |||||||||    
T  41758805 gagtaatgatacatagacaccattaaatggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacacactttc 41758904  T
Q  464 tcttttct 471  Q
    ||||||||    
T  41758905 tcttttct 41758912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 429 - 471
Target Start/End: Original strand, 43197 - 43239
Alignment:
Q  429 acgtagtcacgtggaccccgcacaagcacactttctcttttct 471  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  43197 acgtagtcacgtggactccgcacaagcacactttctcttttct 43239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 429 - 474
Target Start/End: Original strand, 13414826 - 13414871
Alignment:
Q  429 acgtagtcacgtggaccccgcacaagcacactttctcttttctatc 474  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||    
T  13414826 acgtagtcacgtggaccccacacaagcacattttctcttttctatc 13414871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 374 - 464
Target Start/End: Complemental strand, 51898783 - 51898683
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttc 463  Q
    ||||||||||||||||||| | |||| ||| |||||||||||  ||||||||||||          |||||||||||||| |||||||||||||||||||    
T  51898783 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 51898684  T
Q  464 t 464  Q
    |    
T  51898683 t 51898683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 34712091 - 34712189
Alignment:
Q  119 atctcagactatgtcccacaatcatgttgccctccgcactttcttcacctcttcacagccaaaaa-gactcgtcaatcattttcataattagtttcaca 216  Q
    ||||| ||||| ||||||||| | || |||||||| |||||||||| ||||||| |||||||||| | |    ||||||||||||||||| ||||||||    
T  34712091 atctctgactacgtcccacaaacctgctgccctccacactttcttcccctcttcgcagccaaaaaaggcataccaatcattttcataatttgtttcaca 34712189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 429
Target Start/End: Complemental strand, 50591104 - 50591045
Alignment:
Q  370 atttgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa 429  Q
    |||||||| |||||||||| |||||||||| ||| ||||||||| |  ||||||||||||    
T  50591104 atttgagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaa 50591045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 373 - 429
Target Start/End: Original strand, 37649197 - 37649253
Alignment:
Q  373 tgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa 429  Q
    |||||||||||||||||||| | |||| ||| ||||||| |||  ||||||||||||    
T  37649197 tgagtaatgatacatagacatctttaggtggcaatacactctttgacacccacacaa 37649253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 8e-22; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 373 - 471
Target Start/End: Original strand, 15197332 - 15197440
Alignment:
Q  373 tgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacacttt 462  Q
    ||||||||||||||||||||| ||||| ||| |||||||||||  ||||||||||||          |||||||||||||||||||||||||||||||||    
T  15197332 tgagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 15197431  T
Q  463 ctcttttct 471  Q
    |||||||||    
T  15197432 ctcttttct 15197440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 373 - 471
Target Start/End: Complemental strand, 34012397 - 34012289
Alignment:
Q  373 tgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacaca----------acgtagtcacgtggaccccgcacaagcacacttt 462  Q
    ||||||||||||||||||||||||||| ||| |||||||||||  |||||||||||          ||||||||||||||| ||||||||||||||||||    
T  34012397 tgagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacacttt 34012298  T
Q  463 ctcttttct 471  Q
    |||||||||    
T  34012297 ctcttttct 34012289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 12831047 - 12831154
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttc 463  Q
    |||||||||||||||||||||||||| ||  |||||||||||  ||||||||||||          ||||||||||||||||||||||||||||||||||    
T  12831047 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 12831146  T
Q  464 tcttttct 471  Q
    ||||||||    
T  12831147 tcttttct 12831154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 373 - 471
Target Start/End: Complemental strand, 504222 - 504114
Alignment:
Q  373 tgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacacttt 462  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||  ||||||||||||          |||||||||||||||||||||||||||||| ||    
T  504222 tgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacatt 504123  T
Q  463 ctcttttct 471  Q
    |||||||||    
T  504122 ctcttttct 504114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 14547922 - 14548029
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttc 463  Q
    |||||| ||||||||||||||||||| ||| |||||||| ||  ||||||||||||          ||||||||||||||||||||||||||||||||||    
T  14547922 gagtaaagatacatagacacccttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 14548021  T
Q  464 tcttttct 471  Q
    ||||||||    
T  14548022 tcttttct 14548029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 371 - 471
Target Start/End: Complemental strand, 40424046 - 40423936
Alignment:
Q  371 tttgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacact 460  Q
    |||||||||||||||||||| |||||||| ||| |||||||||||  ||| ||||||||          |||||||| ||||||||||||||||||||||    
T  40424046 tttgagtaatgatacatagatacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacact 40423947  T
Q  461 ttctcttttct 471  Q
    |||||||||||    
T  40423946 ttctcttttct 40423936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 373 - 471
Target Start/End: Complemental strand, 23122698 - 23122590
Alignment:
Q  373 tgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacacttt 462  Q
    ||||||||||||||||||||||||||  ||| |||||||| ||  ||||||||||||          ||||||||||||||||||||| |||||||||||    
T  23122698 tgagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcacacttt 23122599  T
Q  463 ctcttttct 471  Q
    |||||||||    
T  23122598 ctcttttct 23122590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 374 - 471
Target Start/End: Complemental strand, 1180040 - 1179933
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacaca----------acgtagtcacgtggaccccgcacaagcacactttc 463  Q
    |||||||||||||||||||||||||| ||| |||||||||||  |||||||||||          ||||||||| |||||  ||||||||||||||||||    
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcacactttc 1179941  T
Q  464 tcttttct 471  Q
    ||||||||    
T  1179940 tcttttct 1179933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 374 - 471
Target Start/End: Complemental strand, 44507187 - 44507080
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacaca----------acgtagtcacgtggaccccgcacaagcacactttc 463  Q
    |||||||||||||||||||||||||| ||| ||||||| |||  |||||||||||          |||||||||||||||||||| ||||||| ||||||    
T  44507187 gagtaatgatacatagacacccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcatactttc 44507088  T
Q  464 tcttttct 471  Q
    ||||||||    
T  44507087 tcttttct 44507080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 429 - 468
Target Start/End: Complemental strand, 8841467 - 8841428
Alignment:
Q  429 acgtagtcacgtggaccccgcacaagcacactttctcttt 468  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  8841467 acgtagtcacgtggaccccgcacaagcacactttctcttt 8841428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 429 - 468
Target Start/End: Complemental strand, 10284666 - 10284627
Alignment:
Q  429 acgtagtcacgtggaccccgcacaagcacactttctcttt 468  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  10284666 acgtagtcacgtggaccccgcacaagcacactttctcttt 10284627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 373 - 468
Target Start/End: Complemental strand, 20075035 - 20074938
Alignment:
Q  373 tgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaacgtagt--cacgtggaccccgcacaagcacactttctcttt 468  Q
    |||||||||||||||||||| |||||| ||| ||||||| |||  ||||||||| ||    ||  ||||||||||| |||||||||||||||||||||    
T  20075035 tgagtaatgatacatagacatccttaggtggcaatacactctttgacacccacataaaaatgtgacacgtggaccctgcacaagcacactttctcttt 20074938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 374 - 464
Target Start/End: Original strand, 37038479 - 37038579
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacaca----------acgtagtcacgtggaccccgcacaagcacactttc 463  Q
    ||||||||||||||||||| | |||| ||| |||||||||||  |||||||||||          ||||||||||||||| |||||||||||||||||||    
T  37038479 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 37038578  T
Q  464 t 464  Q
    |    
T  37038579 t 37038579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 373 - 471
Target Start/End: Complemental strand, 43414682 - 43414574
Alignment:
Q  373 tgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacaca----------acgtagtcacgtggaccccgcacaagcacacttt 462  Q
    ||||| |||||||||||||| |||||||||| || ||||||||  |||||||||||          |||| ||||| |||| ||||||||||||||||||    
T  43414682 tgagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcacacttt 43414583  T
Q  463 ctcttttct 471  Q
    |||||||||    
T  43414582 ctcttttct 43414574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 468
Target Start/End: Original strand, 5957831 - 5957934
Alignment:
Q  375 agtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttct 464  Q
    ||||||||||||||||||  ||||| ||| |||||||||||  ||||||||||||          |||||||||||||| ||||||||| ||||||||||    
T  5957831 agtaatgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcacactttct 5957930  T
Q  465 cttt 468  Q
    ||||    
T  5957931 cttt 5957934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 431 - 471
Target Start/End: Original strand, 9122252 - 9122292
Alignment:
Q  431 gtagtcacgtggaccccgcacaagcacactttctcttttct 471  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  9122252 gtagtcacgtggatcccgcacaagcacactttctcttttct 9122292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 366 - 469
Target Start/End: Complemental strand, 15048289 - 15048177
Alignment:
Q  366 aattatttgagtaatgatacatagacacccttagatgggaatacacccttgtacacc-cacacaa--------cgtagtcacgtggaccccgcacaagca 456  Q
    ||||| |||||| |||||||||||||| |||||| ||| |||||||||||  ||||| |||| ||        ||||| ||| |||||||||||||||||    
T  15048289 aattaattgagttatgatacatagacatccttaggtggcaatacaccctttgacaccacacaaaaatctgacacgtagccacatggaccccgcacaagca 15048190  T
Q  457 cactttctctttt 469  Q
    |||||||||||||    
T  15048189 cactttctctttt 15048177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 471
Target Start/End: Complemental strand, 10621182 - 10621080
Alignment:
Q  379 atgatacatagacacccttagatgggaatacacccttgtacacccacaca----------acgtagtcacgtggaccccgcacaagcacactttctcttt 468  Q
    |||||||||||||| |||||| ||| |||||||||||  |||||||||||          |||||| ||| | || ||||||||||||||||||||||||    
T  10621182 atgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcacactttctcttt 10621083  T
Q  469 tct 471  Q
    |||    
T  10621082 tct 10621080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 413
Target Start/End: Original strand, 9122196 - 9122234
Alignment:
Q  375 agtaatgatacatagacacccttagatgggaatacaccc 413  Q
    ||||||||||||||||||||||||| ||| |||||||||    
T  9122196 agtaatgatacatagacacccttaggtggcaatacaccc 9122234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 415
Target Start/End: Complemental strand, 4854963 - 4854922
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacaccctt 415  Q
    ||||||||||||||||||| |||||| ||| |||||||||||    
T  4854963 gagtaatgatacatagacatccttaggtggcaatacaccctt 4854922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 8e-22; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 377 - 471
Target Start/End: Complemental strand, 22880755 - 22880651
Alignment:
Q  377 taatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttctct 466  Q
    ||||||||||||||||||||||| ||| |||||||||||  ||||||||||||          |||||||||||||||||||||||||||||||||||||    
T  22880755 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcacactttctct 22880656  T
Q  467 tttct 471  Q
    |||||    
T  22880655 tttct 22880651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 373 - 471
Target Start/End: Original strand, 32869677 - 32869785
Alignment:
Q  373 tgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacacttt 462  Q
    ||||||| ||||||||||||||||||| ||| |||||||||||  ||||||||||||          |||||||||||||||||||||||||||||||||    
T  32869677 tgagtaaagatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 32869776  T
Q  463 ctcttttct 471  Q
    |||||||||    
T  32869777 ctcttttct 32869785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 373 - 471
Target Start/End: Original strand, 17598553 - 17598661
Alignment:
Q  373 tgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacacttt 462  Q
    ||||||||||||||||||||||||||| ||| |||||| | ||  ||||||||||||          ||| |||||||||||||||||||||||||||||    
T  17598553 tgagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcacacttt 17598652  T
Q  463 ctcttttct 471  Q
    |||||||||    
T  17598653 ctcttttct 17598661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 374 - 471
Target Start/End: Complemental strand, 6209565 - 6209458
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttc 463  Q
    |||||||||||||||||||||||||| ||| |||||||  ||  |||| |||||||          |||||||||||||||||||||| |||||||||||    
T  6209565 gagtaatgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcacactttc 6209466  T
Q  464 tcttttct 471  Q
    ||||||||    
T  6209465 tcttttct 6209458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 29857827 - 29857934
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacaca----------acgtagtcacgtggaccccgcacaagcacactttc 463  Q
    ||||||||||||||||||||| |||||||| |||||||| ||  |||||||||||          ||||||| ||||||| |||||| ||||||||||||    
T  29857827 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 29857926  T
Q  464 tcttttct 471  Q
    ||||||||    
T  29857927 tcttttct 29857934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 11427616 - 11427725
Alignment:
Q  374 gagtaatgatacatagacaccct--tagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactt 461  Q
    |||||||||||||||||||||||  ||| ||| |||||| ||||  ||||||||||||          |||||||||||||| |||||||||||||||||    
T  11427616 gagtaatgatacatagacaccctcttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 11427715  T
Q  462 tctcttttct 471  Q
    ||||||||||    
T  11427716 tctcttttct 11427725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 371 - 471
Target Start/End: Complemental strand, 31109503 - 31109393
Alignment:
Q  371 tttgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacact 460  Q
    |||||||||||||  |||||||||||||| ||| |||||||||||  ||| ||||||||          ||||||||||| ||||||||| ||| |||||    
T  31109503 tttgagtaatgattaatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcacgtagaccccgcaaaagtacact 31109404  T
Q  461 ttctcttttct 471  Q
    |||||||||||    
T  31109403 ttctcttttct 31109393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 429 - 471
Target Start/End: Complemental strand, 23128162 - 23128120
Alignment:
Q  429 acgtagtcacgtggaccccgcacaagcacactttctcttttct 471  Q
    ||||||||||||||| ||| |||||||||||||||||||||||    
T  23128162 acgtagtcacgtggatcccacacaagcacactttctcttttct 23128120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 31976248 - 31976355
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacactttc 463  Q
    |||| |||||||||||||| |||||| ||| |||| ||||||  ||||||||||||          ||| ||||| || |||||||||||||||||||||    
T  31976248 gagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcacactttc 31976347  T
Q  464 tcttttct 471  Q
    ||||||||    
T  31976348 tcttttct 31976355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 429
Target Start/End: Complemental strand, 15508127 - 15508069
Alignment:
Q  371 tttgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa 429  Q
    ||||||| |||||||||| |||||||||| ||| ||||||||| |  ||||||||||||    
T  15508127 tttgagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaa 15508069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 4029 - 4136
Alignment:
Q  374 gagtaatgatacatagacacccttagatgggaatacacccttgtacacccacaca----------acgtagtcacgtggaccccgcacaagcacactttc 463  Q
    ||||||||||||||||||||| |||||||| |||||||| ||  |||||||||||          ||||||| ||||||| |||||| ||||||||||||    
T  4029 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 4128  T
Q  464 tcttttct 471  Q
    ||||||||    
T  4129 tcttttct 4136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 468
Target Start/End: Complemental strand, 1030 - 925
Alignment:
Q  373 tgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacacttt 462  Q
    |||||||||||||||||||| | |||| ||| |||||||||||  ||| ||||||||          |||||||||||| | ||||||||||||||||||    
T  1030 tgagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacacttt 931  T
Q  463 ctcttt 468  Q
    ||||||    
T  930 ctcttt 925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 468
Target Start/End: Complemental strand, 1030 - 925
Alignment:
Q  373 tgagtaatgatacatagacacccttagatgggaatacacccttgtacacccacacaa----------cgtagtcacgtggaccccgcacaagcacacttt 462  Q
    |||||||||||||||||||| | |||| ||| |||||||||||  ||| ||||||||          |||||||||||| | ||||||||||||||||||    
T  1030 tgagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacacttt 931  T
Q  463 ctcttt 468  Q
    ||||||    
T  930 ctcttt 925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 429 - 471
Target Start/End: Complemental strand, 10144 - 10102
Alignment:
Q  429 acgtagtcacgtggaccccgcacaagcacactttctcttttct 471  Q
    ||||||||||||||||| || ||||||||||||||||||||||    
T  10144 acgtagtcacgtggaccgcgtacaagcacactttctcttttct 10102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University