View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10260_low_10 (Length: 494)

Name: NF10260_low_10
Description: NF10260
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10260_low_10
NF10260_low_10
[»] chr5 (13 HSPs)
chr5 (1-475)||(17155427-17155901)
chr5 (1-68)||(34984816-34984885)
chr5 (1-60)||(7918466-7918527)
chr5 (1-60)||(25627075-25627136)
chr5 (1-59)||(14285180-14285240)
chr5 (10-75)||(892480-892547)
chr5 (4-60)||(87423-87481)
chr5 (1-61)||(37258363-37258425)
chr5 (324-363)||(41551943-41551982)
chr5 (5-75)||(5390853-5390923)
chr5 (10-71)||(30700624-30700685)
chr5 (18-68)||(30883212-30883264)
chr5 (1-78)||(18437085-18437164)
[»] scaffold0006 (2 HSPs)
scaffold0006 (1-63)||(18314-18378)
scaffold0006 (1-61)||(222526-222588)
[»] chr2 (13 HSPs)
chr2 (1-71)||(11251094-11251166)
chr2 (2-58)||(37480095-37480153)
chr2 (1-60)||(42327392-42327453)
chr2 (1-60)||(42922432-42922494)
chr2 (1-60)||(11062378-11062439)
chr2 (1-68)||(19244119-19244188)
chr2 (2-80)||(22382237-22382315)
chr2 (2-80)||(22914263-22914341)
chr2 (1-60)||(40416387-40416448)
chr2 (1-60)||(42602572-42602633)
chr2 (2-60)||(29503289-29503349)
chr2 (1-54)||(4262299-4262354)
chr2 (2-58)||(22999242-22999298)
[»] chr1 (12 HSPs)
chr1 (1-75)||(51703782-51703858)
chr1 (1-60)||(8177179-8177240)
chr1 (1-60)||(33700770-33700831)
chr1 (1-60)||(36371488-36371549)
chr1 (1-75)||(10526826-10526902)
chr1 (1-60)||(4566566-4566627)
chr1 (1-68)||(15786317-15786386)
chr1 (1-60)||(21547477-21547538)
chr1 (1-60)||(50919972-50920033)
chr1 (1-75)||(11063559-11063635)
chr1 (1-34)||(51281397-51281430)
chr1 (1-58)||(2219992-2220051)
[»] scaffold0180 (1 HSPs)
scaffold0180 (1-60)||(19959-20020)
[»] chr8 (15 HSPs)
chr8 (1-60)||(12988446-12988507)
chr8 (2-60)||(19703485-19703545)
chr8 (2-79)||(18546360-18546439)
chr8 (1-60)||(8794342-8794403)
chr8 (1-54)||(33017238-33017293)
chr8 (1-60)||(3624598-3624659)
chr8 (1-60)||(6536538-6536599)
chr8 (1-60)||(18540316-18540377)
chr8 (299-340)||(1926063-1926104)
chr8 (2-60)||(16852358-16852418)
chr8 (1-34)||(31408119-31408152)
chr8 (1-58)||(968382-968441)
chr8 (1-66)||(20225398-20225465)
chr8 (2-34)||(28787494-28787526)
chr8 (1-78)||(35690061-35690140)
[»] chr7 (18 HSPs)
chr7 (1-68)||(43215194-43215263)
chr7 (1-81)||(26459407-26459489)
chr7 (1-68)||(2962469-2962538)
chr7 (1-68)||(25655225-25655294)
chr7 (1-60)||(39631862-39631923)
chr7 (1-79)||(38851255-38851335)
chr7 (1-58)||(14058273-14058332)
chr7 (1-58)||(14368301-14368360)
chr7 (1-68)||(17041009-17041078)
chr7 (1-34)||(18363742-18363775)
chr7 (1-55)||(21558151-21558207)
chr7 (2-68)||(22760873-22760941)
chr7 (1-34)||(29385740-29385773)
chr7 (1-59)||(30442507-30442567)
chr7 (16-78)||(36803639-36803703)
chr7 (1-78)||(7721369-7721448)
chr7 (1-33)||(7744109-7744141)
chr7 (1-66)||(44309910-44309977)
[»] chr4 (12 HSPs)
chr4 (1-68)||(7292795-7292864)
chr4 (1-60)||(37109348-37109409)
chr4 (310-364)||(56049917-56049971)
chr4 (10-60)||(16581711-16581763)
chr4 (1-63)||(23377971-23378035)
chr4 (3-78)||(5450090-5450170)
chr4 (1-56)||(7949451-7949508)
chr4 (1-60)||(8714697-8714758)
chr4 (1-71)||(15180748-15180817)
chr4 (1-34)||(4249223-4249256)
chr4 (14-60)||(41683767-41683815)
chr4 (1-62)||(21404818-21404881)
[»] chr3 (12 HSPs)
chr3 (1-60)||(27093358-27093419)
chr3 (1-60)||(46518646-46518707)
chr3 (1-60)||(16354889-16354950)
chr3 (1-68)||(53412955-53413024)
chr3 (1-81)||(14186645-14186726)
chr3 (2-79)||(17034987-17035064)
chr3 (1-59)||(37788462-37788522)
chr3 (1-54)||(27259185-27259240)
chr3 (2-34)||(17108896-17108928)
chr3 (1-58)||(21960571-21960630)
chr3 (1-58)||(26481947-26482006)
chr3 (2-63)||(54990717-54990780)
[»] chr6 (5 HSPs)
chr6 (1-61)||(21836767-21836829)
chr6 (1-60)||(12188300-12188361)
chr6 (1-68)||(33549114-33549183)
chr6 (4-58)||(10338174-10338230)
chr6 (1-59)||(19638001-19638061)
[»] scaffold0002 (1 HSPs)
scaffold0002 (10-60)||(94977-95029)
[»] scaffold0258 (1 HSPs)
scaffold0258 (1-68)||(15320-15389)


Alignment Details
Target: chr5 (Bit Score: 283; Significance: 1e-158; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 475
Target Start/End: Complemental strand, 17155901 - 17155427
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagcactctcaggttccaagccaataccactaaaccaacctaaatggattacctcctttaaattttgatctt 100  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||  ||||||||||||||||||||||||    
T  17155901 agagaatcaaacctgagaccttgaggaggagcactctcaggtcccaaaccaataccactaaaccaacccaaatgagttacctcctttaaattttgatctt 17155802  T
Q  101 ccaaaatcaagaattagtagttttgaatctgttccacaaaacattcatacttgggnnnnnnn-gacaaatctgttattcaaatctaagannnnnnn-aga 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||        |||    
T  17155801 ccaaaatcaagaattagtagttttgaatctgttccacaaaacattcatacttgggttttttttgacaaatctgttattcaaatctaagattttttttaga 17155702  T
Q  199 agaatatagtcttacttattctgcacacttaatatactatccttacacatattcatcaatttccttagagtttgcattcatcataacctataaagtatag 298  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  17155701 agaatatagtcttacttattttgcacacttaatatactatccatacacatattcatcaatttcctcagagtttgcattcatcataacctacaaagtatag 17155602  T
Q  299 atactcctcgtattaagtgtgtcttggtgtcggataagtatcatatctgacaccgatacatatgataatattaaattatatcannnnnnnnctcaaatta 398  Q
    |||||||||||||||  ||||| ||| ||||||||| |||||||||||||||||||||||| |||| |||||||||||||| |         ||||||||    
T  17155601 atactcctcgtattagatgtgttttgatgtcggatatgtatcatatctgacaccgatacatttgattatattaaattatattattttttt--tcaaatta 17155504  T
Q  399 tcatcggtatcgacgtgtatgtgtctgcctaagtttctgcttcatgaatgactgcttcatatgtcttttgtgtcaac 475  Q
    | |||  | ||||||||||||| ||||  |||||||||||||||||||||||| |||||||||||||||||||||||    
T  17155503 ttatctatgtcgacgtgtatgtctctgtgtaagtttctgcttcatgaatgactacttcatatgtcttttgtgtcaac 17155427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 34984885 - 34984816
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagcactctc--aggttccaagccaataccactaaaccaacc 68  Q
    |||||||| ||||| | ||||||||||||||||| |||  |||||||||||||||||||||| |||||||    
T  34984885 agagaatcgaacctaagaccttgaggaggagcacactcccaggttccaagccaataccactagaccaacc 34984816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 7918466 - 7918527
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggag--cactctcaggttccaagccaataccacta 60  Q
    |||||||| ||||| | ||||||||||||||  ||||| |||||||||||||||||||||||    
T  7918466 agagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccacta 7918527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 25627136 - 25627075
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggag--cactctcaggttccaagccaataccacta 60  Q
    |||||||| ||||||| ||||||||||||||  ||||| || ||||||||||||||||||||    
T  25627136 agagaatcgaacctgagaccttgaggaggagcacactcccaagttccaagccaataccacta 25627075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 14285240 - 14285180
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggag--cactctcaggttccaagccaataccact 59  Q
    |||||||| ||||||| ||||||||||||||  ||||| |||||||||||||||| |||||    
T  14285240 agagaatcgaacctgagaccttgaggaggagcacactcccaggttccaagccaattccact 14285180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 892480 - 892547
Alignment:
Q  10 aacctgaaaccttgaggaggag--cactctcaggttccaagccaataccactaaaccaacctaaatgg 75  Q
    ||||||| ||||||||||||||  |||||| |||| |||||||||||||||||  |||||| ||||||    
T  892480 aacctgagaccttgaggaggagtacactctgaggtcccaagccaataccactaggccaacccaaatgg 892547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 87423 - 87481
Alignment:
Q  4 gaatcaaacctgaaaccttgaggaggag--cactctcaggttccaagccaataccacta 60  Q
    ||||||||||||| ||||||||||||||  ||||| ||| ||||||| |||||||||||    
T  87423 gaatcaaacctgagaccttgaggaggagcacactcccagattccaaggcaataccacta 87481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 37258363 - 37258425
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagcactctc--aggttccaagccaataccactaa 61  Q
    |||||||| ||||||||||||||||||||||||| |||  || | |||||| |||||||||||    
T  37258363 agagaatcgaacctgaaaccttgaggaggagcacactcctagatcccaagctaataccactaa 37258425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 363
Target Start/End: Original strand, 41551943 - 41551982
Alignment:
Q  324 ggtgtcggataagtatcatatctgacaccgatacatatga 363  Q
    |||||||||||||||||||||| |||||||| ||||||||    
T  41551943 ggtgtcggataagtatcatatccgacaccgacacatatga 41551982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 5390853 - 5390923
Alignment:
Q  5 aatcaaacctgaaaccttgaggaggagcactctcaggttccaagccaataccactaaaccaacctaaatgg 75  Q
    |||| ||||||| |||| |||||||||||||| || |  |||||||||||||||||  |||||| ||||||    
T  5390853 aatcgaacctgagacctcgaggaggagcactcccaagccccaagccaataccactaggccaacccaaatgg 5390923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 30700624 - 30700685
Alignment:
Q  10 aacctgaaaccttgaggaggagcactctcaggttccaagccaataccactaaaccaacctaa 71  Q
    ||||||| ||||| || ||||||||||||||||| |||| |||||| ||||  |||||||||    
T  30700624 aacctgagaccttaagaaggagcactctcaggttacaagtcaatacgactaggccaacctaa 30700685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 30883212 - 30883264
Alignment:
Q  18 accttgaggaggagcactctc--aggttccaagccaataccactaaaccaacc 68  Q
    ||||||||||||||||| |||  |||| ||||||||||||||||| |||||||    
T  30883212 accttgaggaggagcacactcccaggtcccaagccaataccactagaccaacc 30883264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 18437164 - 18437085
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggag--cactctcaggttccaagccaataccactaaaccaacctaaatggatt 78  Q
    |||||||| |||| ||||| |||||||||||  |||||||| || |||||  ||||||||||  ||||||||| ||||||    
T  18437164 agagaatcgaacccgaaactttgaggaggagcacactctcaagtcccaagttaataccactaggccaacctaagtggatt 18437085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 18378 - 18314
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagcac--tctcaggttccaagccaataccactaaac 63  Q
    ||||||||||||||||||||||||||||||||||  || ||| |||||||||||| |||||||||    
T  18378 agagaatcaaacctgaaaccttgaggaggagcacaatcccagattccaagccaatgccactaaac 18314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 222588 - 222526
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagcac--tctcaggttccaagccaataccactaa 61  Q
    |||||||||||||||||||||||||||||| |||  |||||| |||||||||| |||||||||    
T  222588 agagaatcaaacctgaaaccttgaggaggaacacaatctcagattccaagccagtaccactaa 222526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 11251166 - 11251094
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagcactct--caggttccaagccaataccactaaaccaacctaa 71  Q
    |||||||||||||||| ||||||||||||||||| ||  || || |||||||||||||||||| |||||||||    
T  11251166 agagaatcaaacctgagaccttgaggaggagcacacttccaagtcccaagccaataccactaagccaacctaa 11251094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 37480153 - 37480095
Alignment:
Q  2 gagaatcaaacctgaaaccttgaggaggag--cactctcaggttccaagccaataccac 58  Q
    ||||||| ||||||| ||||||||||||||  ||||||||||| |||||||||||||||    
T  37480153 gagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccac 37480095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 42327392 - 42327453
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggag--cactctcaggttccaagccaataccacta 60  Q
    |||||||| ||||||| ||||||||||||||  ||||| ||||| |||||||||||||||||    
T  42327392 agagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccacta 42327453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 42922494 - 42922432
Alignment:
Q  1 agagaatcaaacctgaaacctt-gaggaggagcactctc--aggttccaagccaataccacta 60  Q
    |||||||| ||||||| ||||| |||||||||||| |||  ||||||||||||||||||||||    
T  42922494 agagaatcgaacctgagacctttgaggaggagcacactcccaggttccaagccaataccacta 42922432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 11062439 - 11062378
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggag--cactctcaggttccaagccaataccacta 60  Q
    |||||||||||||||| ||||||||||| ||  ||||| || |||||||||||||| |||||    
T  11062439 agagaatcaaacctgagaccttgaggagaagcacactcccaagttccaagccaatatcacta 11062378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 19244188 - 19244119
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagcac--tctcaggttccaagccaataccactaaaccaacc 68  Q
    |||||||| ||||||| |||||| ||||||||||  |||||||| ||||| |||||||| || |||||||    
T  19244188 agagaatcgaacctgagaccttggggaggagcacactctcaggtcccaagtcaataccagtagaccaacc 19244119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 22382237 - 22382315
Alignment:
Q  2 gagaatcaaacctgaaaccttgaggaggagcactctcaggttccaagccaataccactaaaccaacctaaatggattac 80  Q
    ||||||| ||| ||| |||||||||| |||||||| ||||| | ||| ||||||||| |  ||||||||||||| ||||    
T  22382237 gagaatcgaacttgagaccttgaggatgagcactcccaggtccaaagtcaataccacaatgccaacctaaatgggttac 22382315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 22914263 - 22914341
Alignment:
Q  2 gagaatcaaacctgaaaccttgaggaggagcactctcaggttccaagccaataccactaaaccaacctaaatggattac 80  Q
    ||||||| ||| ||| |||||||||| |||||||| ||||| | ||| ||||||||| |  ||||||||||||| ||||    
T  22914263 gagaatcgaacttgagaccttgaggatgagcactcccaggtccaaagtcaataccacaatgccaacctaaatgggttac 22914341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 40416387 - 40416448
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagca--ctctcaggttccaagccaataccacta 60  Q
    |||||||| ||||||| ||||| ||||||||||  ||| ||||||||||| |||||||||||    
T  40416387 agagaatcgaacctgagaccttaaggaggagcatactcccaggttccaagtcaataccacta 40416448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 42602633 - 42602572
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggag--cactctcaggttccaagccaataccacta 60  Q
    |||||||||||||| | |||||||| |||||  ||||| ||||| |||||||||||||||||    
T  42602633 agagaatcaaacctaagaccttgagaaggagcacactcccaggtcccaagccaataccacta 42602572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 29503349 - 29503289
Alignment:
Q  2 gagaatcaaacctgaaaccttgaggaggag--cactctcaggttccaagccaataccacta 60  Q
    ||||||| ||||||| ||||||||||||||  ||||| ||||| |||| ||||||||||||    
T  29503349 gagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaaaccaataccacta 29503289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 4262299 - 4262354
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagcactct--caggttccaagccaata 54  Q
    |||||||| ||||||| ||||||||||||||||| ||  ||||| |||||||||||    
T  4262299 agagaatcgaacctgagaccttgaggaggagcacactgccaggtcccaagccaata 4262354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 22999298 - 22999242
Alignment:
Q  2 gagaatcaaacctgaaaccttgaggaggagcactctcaggttccaagccaataccac 58  Q
    ||||| ||||| ||| ||||||||||||||||||| ||||| | ||| |||||||||    
T  22999298 gagaagcaaacttgagaccttgaggaggagcactcccaggtccaaagtcaataccac 22999242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 51703858 - 51703782
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagcactctc--aggttccaagccaataccactaaaccaacctaaatgg 75  Q
    |||||||| |||||||||| |||||||||||||| |||  || ||||||||||||||||||| ||||||| ||||||    
T  51703858 agagaatcgaacctgaaactttgaggaggagcacactcccagattccaagccaataccactagaccaacccaaatgg 51703782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 8177179 - 8177240
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggag--cactctcaggttccaagccaataccacta 60  Q
    |||||||| ||||||||||||||||||||||  ||||| ||| | |||||||||||||||||    
T  8177179 agagaatcgaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccacta 8177240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 33700770 - 33700831
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggag--cactctcaggttccaagccaataccacta 60  Q
    |||||||| ||||||| ||||||||||||||  ||||| ||| |||||||||||||||||||    
T  33700770 agagaatcgaacctgagaccttgaggaggagcacactcccagattccaagccaataccacta 33700831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 36371549 - 36371488
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagcactctc--aggttccaagccaataccacta 60  Q
    |||||||| ||||| | ||||||||||||||||| |||  ||||||||||||||||||||||    
T  36371549 agagaatcgaacctcagaccttgaggaggagcacactcccaggttccaagccaataccacta 36371488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 10526902 - 10526826
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagca--ctctcaggttccaagccaataccactaaaccaacctaaatgg 75  Q
    |||||||| || |||| ||||||||||||||||  ||| ||||| ||||||||||||||||  ||||||| ||||||    
T  10526902 agagaatcgaatctgagaccttgaggaggagcaaactcccaggtcccaagccaataccactggaccaacccaaatgg 10526826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 4566627 - 4566566
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggag--cactctcaggttccaagccaataccacta 60  Q
    |||||||| ||||||| ||| ||||||||||  ||||| ||||||||||||||||| |||||    
T  4566627 agagaatcgaacctgagaccctgaggaggagcacactcccaggttccaagccaatatcacta 4566566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 15786317 - 15786386
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggag--cactctcaggttccaagccaataccactaaaccaacc 68  Q
    |||||||| ||||||| ||||||||||||||  ||||| ||| | |||||||||||| |||| |||||||    
T  15786317 agagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaatactactagaccaacc 15786386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 21547477 - 21547538
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagca--ctctcaggttccaagccaataccacta 60  Q
    |||||||| |||||||||||| |||||||||||  ||| || || |||||||||||||||||    
T  21547477 agagaatcgaacctgaaacctcgaggaggagcaccctcccatgtcccaagccaataccacta 21547538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 50920033 - 50919972
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggag--cactctcaggttccaagccaataccacta 60  Q
    |||||||| ||||||||||||| |||| |||  |||||||||||| |||| |||||||||||    
T  50920033 agagaatcgaacctgaaaccttaaggatgagcacactctcaggtttcaagtcaataccacta 50919972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 11063635 - 11063559
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagcactct--caggttccaagccaataccactaaaccaacctaaatgg 75  Q
    |||||||| ||||| | ||||||||||||| ||| ||  ||||| ||||||||||||||||| | ||||| ||||||    
T  11063635 agagaatcgaacctaagaccttgaggaggaacacactttcaggtcccaagccaataccactagatcaacccaaatgg 11063559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 51281430 - 51281397
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagcac 34  Q
    |||||||||||||||| |||||||||||||||||    
T  51281430 agagaatcaaacctgagaccttgaggaggagcac 51281397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2220051 - 2219992
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagcactct--caggttccaagccaataccac 58  Q
    |||||||| ||||||| |||| |||||| ||||| ||  |||||||||||||||||||||    
T  2220051 agagaatcgaacctgagacctcgaggagaagcacactttcaggttccaagccaataccac 2219992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 19959 - 20020
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagc--actctcaggttccaagccaataccacta 60  Q
    |||||||| ||||||| |||||||||||||||  |||| |||||||||||||||||||||||    
T  19959 agagaatcgaacctgagaccttgaggaggagcatactcccaggttccaagccaataccacta 20020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 12988507 - 12988446
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagcactct--caggttccaagccaataccacta 60  Q
    |||| ||| ||||||||||||||||||||||||| ||  |||||||||||||||||||||||    
T  12988507 agaggatcgaacctgaaaccttgaggaggagcacacttccaggttccaagccaataccacta 12988446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 19703485 - 19703545
Alignment:
Q  2 gagaatcaaacctgaaaccttgaggaggag--cactctcaggttccaagccaataccacta 60  Q
    ||||||| ||||||| ||||||||||||||  ||||||||||| |||||||||||||||||    
T  19703485 gagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccacta 19703545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 18546360 - 18546439
Alignment:
Q  2 gagaatcaaacctgaaaccttgaggaggagca--ctctcaggttccaagccaataccactaaaccaacctaaatggatta 79  Q
    ||||||| ||||||| |||| |||||||||||  ||||||||| ||||  ||||||||||| |||||||||| |||||||    
T  18546360 gagaatcgaacctgagacctcgaggaggagcatgctctcaggtcccaaatcaataccactagaccaacctaagtggatta 18546439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 8794342 - 8794403
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagcactct--caggttccaagccaataccacta 60  Q
    |||||||| ||||||| ||| ||||||||||||| ||  |||||||||||||||||||||||    
T  8794342 agagaatcgaacctgagaccctgaggaggagcacacttccaggttccaagccaataccacta 8794403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 33017293 - 33017238
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagcactct--caggttccaagccaata 54  Q
    |||||||| ||||||| ||||||||||||||||| ||  |||||||||||||||||    
T  33017293 agagaatcgaacctgagaccttgaggaggagcacacttccaggttccaagccaata 33017238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 3624659 - 3624598
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagcactctc--aggttccaagccaataccacta 60  Q
    |||||||| ||||||| ||||||| ||||||||| |||  |||| |||||||||||||||||    
T  3624659 agagaatcgaacctgagaccttgaagaggagcacactcccaggtcccaagccaataccacta 3624598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 6536599 - 6536538
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagcactctc--aggttccaagccaataccacta 60  Q
    |||||||  ||||||| ||||||||||||||||| |||  |||| |||||||||||||||||    
T  6536599 agagaattgaacctgagaccttgaggaggagcacactcctaggtcccaagccaataccacta 6536538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 18540377 - 18540316
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggag--cactctcaggttccaagccaataccacta 60  Q
    |||||||| ||||||| ||||||||||| ||  ||||| ||||| |||||||||||||||||    
T  18540377 agagaatcgaacctgagaccttgaggagaagtacactcccaggtcccaagccaataccacta 18540316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 340
Target Start/End: Complemental strand, 1926104 - 1926063
Alignment:
Q  299 atactcctcgtattaagtgtgtcttggtgtcggataagtatc 340  Q
    ||||||||| |||||||||||||| ||||||||||| |||||    
T  1926104 atactcctcatattaagtgtgtctcggtgtcggatacgtatc 1926063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 16852418 - 16852358
Alignment:
Q  2 gagaatcaaacctgaaaccttgaggaggagcactctc--aggttccaagccaataccacta 60  Q
    ||||||| ||||||| |||| |||||||||||| |||  |||| |||||||||||||||||    
T  16852418 gagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccacta 16852358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 31408119 - 31408152
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagcac 34  Q
    |||||||| |||||||||||||||||||||||||    
T  31408119 agagaatcgaacctgaaaccttgaggaggagcac 31408152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 968441 - 968382
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggag--cactctcaggttccaagccaataccac 58  Q
    |||||||| ||||||| |||| |||||||||  ||||| ||||| |||||||||||||||    
T  968441 agagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccac 968382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 20225398 - 20225465
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagca--ctctcaggttccaagccaataccactaaaccaa 66  Q
    ||||||||||| || ||| |||||||||||| |  |||||||||||||| |||||| |||||| ||||    
T  20225398 agagaatcaaatctaaaatcttgaggaggagtatactctcaggttccaaaccaatatcactaagccaa 20225465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 28787494 - 28787526
Alignment:
Q  2 gagaatcaaacctgaaaccttgaggaggagcac 34  Q
    ||||||||||||||| |||||||||||||||||    
T  28787494 gagaatcaaacctgagaccttgaggaggagcac 28787526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 35690061 - 35690140
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagc--actctcaggttccaagccaataccactaaaccaacctaaatggatt 78  Q
    |||||||| ||||||| |||||||||||||||  || | ||| | |||||||||||||||||  |||||  |||||||||    
T  35690061 agagaatcgaacctgagaccttgaggaggagcaaacacccagatcccaagccaataccactaggccaacacaaatggatt 35690140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 43215263 - 43215194
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagcactctc--aggttccaagccaataccactaaaccaacc 68  Q
    |||||||| ||||||| ||||||||||||||||| |||  |||| ||||||||||||||||| |||||||    
T  43215263 agagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccactagaccaacc 43215194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 26459407 - 26459489
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggag--cactctcaggttccaagccaataccactaaaccaacctaaatggattacc 81  Q
    |||||||| ||||||| ||||||||||||||  ||||| ||||| |||||||||||||||||  |||||| || ||| |||||    
T  26459407 agagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttacc 26459489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 2962538 - 2962469
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagcactctca--ggttccaagccaataccactaaaccaacc 68  Q
    |||||||| ||||||| | ||||||||||||||| ||||  |||||||| |||||||||||| |||||||    
T  2962538 agagaatcgaacctgagatcttgaggaggagcacactcacaggttccaaaccaataccactagaccaacc 2962469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 25655225 - 25655294
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggagga--gcactctcaggttccaagccaataccactaaaccaacc 68  Q
    |||||||| |||||||||||||||||||||   ||||| ||| | ||||| |||||||||||||||||||    
T  25655225 agagaatcgaacctgaaaccttgaggaggatcacactcacagatcccaagtcaataccactaaaccaacc 25655294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 39631923 - 39631862
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagc--actctcaggttccaagccaataccacta 60  Q
    |||||||| ||||||| |||||||||||||||  |||| ||||| |||||||||||||||||    
T  39631923 agagaatcgaacctgagaccttgaggaggagcttactcccaggtcccaagccaataccacta 39631862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 38851335 - 38851255
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggag--cactctcaggttccaagccaataccactaaaccaacctaaatggatta 79  Q
    |||||||||||| ||||||||||||||| ||  ||||| ||| |||||| ||||||||| || ||||||| |||| |||||    
T  38851335 agagaatcaaacatgaaaccttgaggagaagcacactcacagattccaaaccaataccattataccaacccaaatagatta 38851255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 14058332 - 14058273
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagcac--tctcaggttccaagccaataccac 58  Q
    |||||||| ||||||| |||||||||| ||||||  |||||||||||||| |||||||||    
T  14058332 agagaatcgaacctgagaccttgaggatgagcacactctcaggttccaagacaataccac 14058273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 14368360 - 14368301
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagcac--tctcaggttccaagccaataccac 58  Q
    |||||||| ||||||| |||||||||| ||||||  |||||||||||||| |||||||||    
T  14368360 agagaatcgaacctgagaccttgaggatgagcacactctcaggttccaagacaataccac 14368301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 17041009 - 17041078
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagcactct--caggttccaagccaataccactaaaccaacc 68  Q
    |||||||| ||||||| ||||||||||||||||| ||  ||| | |||||||||| |||||| |||||||    
T  17041009 agagaatcgaacctgagaccttgaggaggagcacacttccagatcccaagccaatgccactagaccaacc 17041078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 18363775 - 18363742
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagcac 34  Q
    |||||||||||||||| |||||||||||||||||    
T  18363775 agagaatcaaacctgagaccttgaggaggagcac 18363742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 21558207 - 21558151
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagcac--tctcaggttccaagccaatac 55  Q
    |||||||| ||||||| |||||||||||||||||  ||| |||||||||| ||||||    
T  21558207 agagaatcgaacctgagaccttgaggaggagcacattcttaggttccaagtcaatac 21558151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 22760941 - 22760873
Alignment:
Q  2 gagaatcaaacctgaaaccttgaggaggag--cactctcaggttccaagccaataccactaaaccaacc 68  Q
    ||||||| ||||||| ||||||||||||||  ||||| ||||| ||||| ||||||||| | |||||||    
T  22760941 gagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagtcaataccaccagaccaacc 22760873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 29385740 - 29385773
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagcac 34  Q
    |||||||||||||||| |||||||||||||||||    
T  29385740 agagaatcaaacctgagaccttgaggaggagcac 29385773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 30442567 - 30442507
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagc--actctcaggttccaagccaataccact 59  Q
    |||||||| ||||| | |||||||||||||||  |||| ||||| ||||||||||||||||    
T  30442567 agagaatcgaacctcagaccttgaggaggagcaaactcccaggtcccaagccaataccact 30442507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 36803639 - 36803703
Alignment:
Q  16 aaaccttgaggaggagca--ctctcaggttccaagccaataccactaaaccaacctaaatggatt 78  Q
    |||| |||||||||||||  ||| ||||| ||||| ||||||||||| ||||||| |||||||||    
T  36803639 aaactttgaggaggagcatactcccaggtcccaagtcaataccactagaccaacccaaatggatt 36803703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 7721448 - 7721369
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggag--cactctcaggttccaagccaataccactaaaccaacctaaatggatt 78  Q
    |||||||| ||| ||| ||||||||||||||  ||||| ||||| |||| |||||||||||  |||| || |||||||||    
T  7721448 agagaatcgaacatgagaccttgaggaggagtacactcccaggtcccaaaccaataccacttgaccaccccaaatggatt 7721369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 7744109 - 7744141
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagca 33  Q
    |||||||||||||||| ||||||||||||||||    
T  7744109 agagaatcaaacctgagaccttgaggaggagca 7744141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 44309910 - 44309977
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagca--ctctcaggttccaagccaataccactaaaccaa 66  Q
    ||||||||||| || ||| |||||||||||| |  |||||||||||||| |||||| |||||| ||||    
T  44309910 agagaatcaaatctaaaatcttgaggaggagtatactctcaggttccaaaccaatatcactaagccaa 44309977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 7292795 - 7292864
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagcactctc--aggttccaagccaataccactaaaccaacc 68  Q
    |||||||| ||||||| || |||||||||||||| |||  |||||||||||||||||||||| |||||||    
T  7292795 agagaatcgaacctgagactttgaggaggagcacactcccaggttccaagccaataccactagaccaacc 7292864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 37109348 - 37109409
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggag--cactctcaggttccaagccaataccacta 60  Q
    |||||||| ||||||| ||||||||||||||  ||||| ||||| |||||||||||||||||    
T  37109348 agagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccacta 37109409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 364
Target Start/End: Complemental strand, 56049971 - 56049917
Alignment:
Q  310 attaagtgtgtcttggtgtcggataagtatcatatctgacaccgatacatatgat 364  Q
    |||| ||||||| |||||||||||| ||||||| ||||||||||| |||||||||    
T  56049971 attaggtgtgtcctggtgtcggatacgtatcatgtctgacaccgacacatatgat 56049917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 16581763 - 16581711
Alignment:
Q  10 aacctgaaaccttgaggaggagca--ctctcaggttccaagccaataccacta 60  Q
    ||||||| ||||||||||||||||  ||| |||||||||||||||||||||||    
T  16581763 aacctgagaccttgaggaggagcagactcccaggttccaagccaataccacta 16581711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 23378035 - 23377971
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggag--cactctcaggttccaagccaataccactaaac 63  Q
    |||||||| ||||||| ||||||||||||||  ||||| ||||| ||||||||||| ||||||||    
T  23378035 agagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataacactaaac 23377971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 5450170 - 5450090
Alignment:
Q  3 agaatcaaacctgaaaccttgaggaggag--cactctcaggttccaagcc---aataccactaaaccaacctaaatggatt 78  Q
    |||||| || |||||||||||||||||||  ||||| ||| |||||||||   ||||||||||  ||||||||||||||||    
T  5450170 agaatcgaatctgaaaccttgaggaggagcacactcccagattccaagccaataataccactagtccaacctaaatggatt 5450090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 7949451 - 7949508
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagcactctc--aggttccaagccaatacc 56  Q
    |||||||| ||||||| ||||||||||||||||| |||  |||| |||||||||||||    
T  7949451 agagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaatacc 7949508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 8714758 - 8714697
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagca--ctctcaggttccaagccaataccacta 60  Q
    ||||||||||| |||||||||||||||||| ||  ||||||| | |||| ||||||||||||    
T  8714758 agagaatcaaatctgaaaccttgaggaggaacacgctctcagatcccaaaccaataccacta 8714697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 15180817 - 15180748
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagcactctcaggttccaagccaataccactaaaccaacctaa 71  Q
    |||||||| ||||| | ||||||||||| | ||||| ||||| ||||||||||||||||| ||||| ||||    
T  15180817 agagaatcgaacctaagaccttgaggagta-cactcccaggtcccaagccaataccactagaccaatctaa 15180748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 4249256 - 4249223
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagcac 34  Q
    |||||||||||||||| |||||||||||||||||    
T  4249256 agagaatcaaacctgagaccttgaggaggagcac 4249223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 41683815 - 41683767
Alignment:
Q  14 tgaaaccttgaggaggagcac--tctcaggttccaagccaataccacta 60  Q
    |||||| ||||| ||||||||  ||||||||||||||||||||||||||    
T  41683815 tgaaactttgagaaggagcacactctcaggttccaagccaataccacta 41683767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 21404818 - 21404881
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagc--actctcaggttccaagccaataccactaaa 62  Q
    |||||||||||| ||| |||||||||||||||  ||||||||||  |||| |||| ||||||||    
T  21404818 agagaatcaaacatgagaccttgaggaggagcatactctcaggtctcaagtcaatgccactaaa 21404881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 27093358 - 27093419
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggag--cactctcaggttccaagccaataccacta 60  Q
    |||||||||||||||| ||||||||||||||  ||||| || ||||||||||||||||||||    
T  27093358 agagaatcaaacctgagaccttgaggaggagcacactcccaagttccaagccaataccacta 27093419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 46518707 - 46518646
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggag--cactctcaggttccaagccaataccacta 60  Q
    |||||||||||||||||||||||||||||||  ||||| ||| | |||||||||||||||||    
T  46518707 agagaatcaaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccacta 46518646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 16354889 - 16354950
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagcactctca--ggttccaagccaataccacta 60  Q
    |||||||| ||||||| ||| ||||||||||||| ||||  |||||||||||||||||||||    
T  16354889 agagaatcgaacctgagaccctgaggaggagcacactcacaggttccaagccaataccacta 16354950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 53413024 - 53412955
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagcactctc--aggttccaagccaataccactaaaccaacc 68  Q
    |||||||  ||||||| ||||||||||||||||| |||  ||||| |||||||||||||||| |||||||    
T  53413024 agagaattgaacctgagaccttgaggaggagcacactcccaggttacaagccaataccactagaccaacc 53412955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 14186726 - 14186645
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagcactct-caggttccaagccaataccactaaaccaacctaaatggattacc 81  Q
    |||||||| ||||||| ||||||||||||||||| || ||||| ||||| |||||||||||  |||||| || ||| |||||    
T  14186726 agagaatcgaacctgagaccttgaggaggagcacactccaggtcccaagacaataccactaggccaacccaagtgggttacc 14186645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 17035064 - 17034987
Alignment:
Q  2 gagaatcaaacctgaaaccttgaggaggagcactctcaggttccaagccaataccactaaaccaacctaaatggatta 79  Q
    ||||||| ||||||| |||||||||| |||||||||||| | ||||| ||||||||| | | ||||| || |||||||    
T  17035064 gagaatcgaacctgagaccttgaggatgagcactctcagatcccaagtcaataccaccagagcaacccaagtggatta 17034987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 37788462 - 37788522
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagcactctc--aggttccaagccaataccact 59  Q
    |||||||| ||||||| ||||||||||||||||| |||  |||||||||| ||||||||||    
T  37788462 agagaatcgaacctgagaccttgaggaggagcacactcctaggttccaagtcaataccact 37788522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 27259240 - 27259185
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggag--cactctcaggttccaagccaata 54  Q
    ||||||||||||||||||||| |||||||||  ||||| ||||| |||||||||||    
T  27259240 agagaatcaaacctgaaacctcgaggaggagcacactcccaggtcccaagccaata 27259185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 17108896 - 17108928
Alignment:
Q  2 gagaatcaaacctgaaaccttgaggaggagcac 34  Q
    ||||||||||||||| |||||||||||||||||    
T  17108896 gagaatcaaacctgagaccttgaggaggagcac 17108928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 21960630 - 21960571
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagcac--tctcaggttccaagccaataccac 58  Q
    |||||||| || |||| |||| ||||||||||||  |||||||| |||||||||||||||    
T  21960630 agagaatcgaatctgagacctcgaggaggagcacactctcaggtcccaagccaataccac 21960571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 26482006 - 26481947
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggag--cactctcaggttccaagccaataccac 58  Q
    |||||||| ||||| |||| |||||||||||  ||||||||||| |||||||| ||||||    
T  26482006 agagaatcgaacctaaaactttgaggaggagcacactctcaggtcccaagccattaccac 26481947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 54990780 - 54990717
Alignment:
Q  2 gagaatcaaacctgaaaccttgaggaggagcactctc--aggttccaagccaataccactaaac 63  Q
    ||||||| ||||||| ||||||||||||||||| |||  |||| ||||||||| | ||||||||    
T  54990780 gagaatcgaacctgagaccttgaggaggagcacgctccaaggtcccaagccaacaacactaaac 54990717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000005; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 21836829 - 21836767
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggagcac--tctcaggttccaagccaataccactaa 61  Q
    |||||||||||||||||||||| ||||||| |||  ||||||  |||||||||||||||||||    
T  21836829 agagaatcaaacctgaaaccttaaggaggaacacaatctcagagtccaagccaataccactaa 21836767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 12188300 - 12188361
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggag--cactctcaggttccaagccaataccacta 60  Q
    |||||||| ||| ||||||||||||||||||  ||||| ||||| |||||||||||||||||    
T  12188300 agagaatcgaacttgaaaccttgaggaggagcacactcccaggtcccaagccaataccacta 12188361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 33549183 - 33549114
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggag--cactctcaggttccaagccaataccactaaaccaacc 68  Q
    |||||||| ||||||| |||| |||||||||  ||||| ||||| ||||||||||||||| | |||||||    
T  33549183 agagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacc 33549114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 10338174 - 10338230
Alignment:
Q  4 gaatcaaacctgaaaccttgaggaggagcactctc--aggttccaagccaataccac 58  Q
    ||||| ||||||| ||||||||||||||||| |||  |||| |||||||||||||||    
T  10338174 gaatcgaacctgagaccttgaggaggagcacactcctaggtcccaagccaataccac 10338230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 19638001 - 19638061
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggag--cactctcaggttccaagccaataccact 59  Q
    |||||||||||||||| ||||||||  ||||  ||||| ||||||||| ||||||||||||    
T  19638001 agagaatcaaacctgagaccttgagctggagcacactcccaggttccacgccaataccact 19638061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 94977 - 95029
Alignment:
Q  10 aacctgaaaccttgaggaggagcactctc--aggttccaagccaataccacta 60  Q
    ||||||| ||||||||||||||||| |||  ||||||||||||||||||||||    
T  94977 aacctgagaccttgaggaggagcacactcccaggttccaagccaataccacta 95029  T

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Target: scaffold0258 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 15320 - 15389
Alignment:
Q  1 agagaatcaaacctgaaaccttgaggaggag--cactctcaggttccaagccaataccactaaaccaacc 68  Q
    |||||||| ||||||| |||| |||||||||  ||||| ||||| ||||||||||||||| | |||||||    
T  15320 agagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacc 15389  T

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