View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10260_low_31 (Length: 335)
Name: NF10260_low_31
Description: NF10260
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10260_low_31 |
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Alignment Details
Target: chr4 (Bit Score: 301; Significance: 1e-169; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 1422913 - 1423229
Alignment:
| Q |
1 |
ttcttaagttgaaaatatttgtaattacaaaactaaaagaggatttatcataaagtatgaaatttgtataatgacataattataagtagatttgacgtag |
100 |
Q |
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| T |
1422913 |
ttcttaagttgaaaatatttgtaattacaaaactaaaataggatttatcataaagtatgaaatttgtataatgacataattataagtagatttgacgtag |
1423012 |
T |
|
| Q |
101 |
tcactacttgtgttaaatatatttttaaattaatcttgtgatgaacaaatcaaaacaagatttgatatagtcattgtttatatcctttttaaattaactt |
200 |
Q |
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| T |
1423013 |
tcactacttgtgttaaatatatttttaaattaatcttgtgatgaacaaatcaaaacaagatttgatatagtcattgtttatatcctttttaaattaactt |
1423112 |
T |
|
| Q |
201 |
tagagattagaggatgctcacaatagccaaagagaaagtgtatctaaaatatttatcattttgagctacttcaccaataacttctggtttcactctaaga |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1423113 |
tagagattagaggatgctcacaatagccaaagagaaagtgtatctaaaatgattatcattttgagctacttcaccaataacttctggtttcactctaaga |
1423212 |
T |
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| Q |
301 |
attagaacactcattac |
317 |
Q |
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|| |||||||||||||| |
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| T |
1423213 |
atcagaacactcattac |
1423229 |
T |
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