View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10260_low_49 (Length: 290)
Name: NF10260_low_49
Description: NF10260
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10260_low_49 |
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Alignment Details
Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 13 - 245
Target Start/End: Complemental strand, 8791465 - 8791233
Alignment:
| Q |
13 |
caactggtttgttaatcaaaggatatattgttcgtacctttaaaagtatgtttctttgcattgagannnnnnnaccaacaaagggtaacttggtacgtag |
112 |
Q |
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| T |
8791465 |
caactggtttgttaatcaaaggatacattgttcgtacctttaaaagtatgtttctttgcattgagatttttttaccaacaaagggtaacttggtacatag |
8791366 |
T |
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| Q |
113 |
tgaaattacactgcatggaaaataatttgttagtgattgtggtcataataatgaaactattttcaatatttcttttctgatttgttaaattccttagatt |
212 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |
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| T |
8791365 |
tgaaattacattgcatggaaaataatttgttagtgattgtggtcataataatgaaactattttcaacacctcttttctgatttgttaaattccttagatt |
8791266 |
T |
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| Q |
213 |
ggttcatcgtggtaaaggaatgaaggaatgtat |
245 |
Q |
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| T |
8791265 |
ggttcatcgtggtaaaggaatgaaggaatgtat |
8791233 |
T |
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