View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10260_low_56 (Length: 270)
Name: NF10260_low_56
Description: NF10260
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10260_low_56 |
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Alignment Details
Target: chr1 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 15 - 252
Target Start/End: Original strand, 48019590 - 48019827
Alignment:
| Q |
15 |
gagagggctgaaaaacctgcaatatgaataaatacattaaatataatttagtatttgagttattctactaccaaaactagaactgatttcatcaaagaag |
114 |
Q |
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| T |
48019590 |
gagagggctgaaaaacctgcaatatgaataaatacattaaatataatttagtatttgagttattctactaccaaaactagaactgatttcatcaaagaag |
48019689 |
T |
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| Q |
115 |
ctaaatgcattaaaagacactatgaaatttcatatgcatattctaccttccaaaaattccccagaatccaaaaaatccaatcattccttgaacaaaagaa |
214 |
Q |
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| T |
48019690 |
ctaaatgcattaaaagacactatgaaatttcatatgcatattctaccttccaaaaattccccagaatccaaaaaatccaatcattccttgaacaaaagaa |
48019789 |
T |
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| Q |
215 |
gcaataagcaatgccccttgaatagctctcatggattg |
252 |
Q |
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| T |
48019790 |
gcaataagcaatgccccttgaatagctctcatggattg |
48019827 |
T |
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