View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10261A_low_100 (Length: 341)
Name: NF10261A_low_100
Description: NF10261A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10261A_low_100 |
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Alignment Details
Target: chr6 (Bit Score: 317; Significance: 1e-179; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 2819716 - 2819388
Alignment:
| Q |
1 |
tcatagaaatttggtttccctttatcaccttgaagtgtgatctcaactaatgtagctggaggtgttccaatgagtccattgcaagctaatcttccatcac |
100 |
Q |
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| T |
2819716 |
tcatagaaatttggtctccctttatcaccttgaagtgtgatttcaactaatgtagctggaggtgttccaatgagtccattgcaagctaatcttccatcac |
2819617 |
T |
|
| Q |
101 |
aatccccagtttcacaagatggtttccaattatttgaagcaaaattgcaacctgttctagcccaaattctaccactccatgaccatggtgctagaatttt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2819616 |
aatccccagtttcacaagatggtttccaattatttgaagcaaaattgcaacctgttctagcccaaattctaccactccatgaccatggtgctagaatttt |
2819517 |
T |
|
| Q |
201 |
ctttgtttggcctgaaggaaggtagaatccaccatctgctataattggttgaccagtgtttggtgctgttgctggccatattggaaagggacatttattg |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
2819516 |
ctttgtttggcctgaaggaaggtagaatccaccatctgctataattggttgaccagtgtttggtgctgttgcaggccatattggaaagggacatttattg |
2819417 |
T |
|
| Q |
301 |
tgtatatagaatgttgcttgatgtccatc |
329 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
2819416 |
tgtatatagaatgttgcttgatgtccatc |
2819388 |
T |
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