View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10261A_low_170 (Length: 283)
Name: NF10261A_low_170
Description: NF10261A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10261A_low_170 |
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Alignment Details
Target: chr7 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 24 - 279
Target Start/End: Original strand, 41922969 - 41923225
Alignment:
| Q |
24 |
agagagagagatgtctcatttcagagagaacaagttgaagaatgacagggatggagacggggaggattaagagtagagattacaatggatattcacggga |
123 |
Q |
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| T |
41922969 |
agagagagagatgtctcatttcagagagaacaagttgaaaaatgacagggatggagacggggagaattaagagtagagattacaatggatattcacggga |
41923068 |
T |
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| Q |
124 |
agcaaagtattcatcggctactcact-atgaaataaaattgatattattgtcaacttcgtattagtctttgttgatgtccgttagatgggtattttacaa |
222 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
41923069 |
agcaaagtattcatcggctactcacttatgaaataaaattgatattattgtcaacttcgtattagtccttgttgatgtccgttagatgggtattttacaa |
41923168 |
T |
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| Q |
223 |
attttgaatcatcatcacaaacgtacgtccatcaaactctaaaataggtggttcttg |
279 |
Q |
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| T |
41923169 |
attttgaatcatcatcacaaacgtacgtccatcaaactctaaaataggtggttcttg |
41923225 |
T |
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