View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10261A_low_207 (Length: 261)

Name: NF10261A_low_207
Description: NF10261A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10261A_low_207
NF10261A_low_207
[»] scaffold0109 (1 HSPs)
scaffold0109 (2-254)||(21220-21472)
[»] chr2 (42 HSPs)
chr2 (2-254)||(27392642-27392894)
chr2 (16-250)||(19456762-19456996)
chr2 (16-250)||(21703505-21703739)
chr2 (18-250)||(27434788-27435020)
chr2 (42-250)||(261109-261317)
chr2 (18-181)||(28881879-28882042)
chr2 (42-250)||(12716949-12717157)
chr2 (42-250)||(16829682-16829890)
chr2 (42-250)||(16891591-16891799)
chr2 (42-250)||(21677526-21677734)
chr2 (42-181)||(23128979-23129118)
chr2 (42-250)||(32049487-32049695)
chr2 (42-181)||(12655231-12655370)
chr2 (42-181)||(20837607-20837746)
chr2 (42-244)||(13936894-13937096)
chr2 (42-244)||(34279138-34279340)
chr2 (173-250)||(31891669-31891746)
chr2 (42-250)||(37925182-37925390)
chr2 (42-250)||(39889751-39889959)
chr2 (42-241)||(9350347-9350546)
chr2 (42-241)||(12586490-12586689)
chr2 (42-241)||(27776896-27777095)
chr2 (42-241)||(27803381-27803580)
chr2 (42-241)||(27816663-27816862)
chr2 (42-241)||(40233188-40233387)
chr2 (42-168)||(37374850-37374976)
chr2 (173-250)||(3784477-3784554)
chr2 (173-250)||(16163422-16163499)
chr2 (173-250)||(34156834-34156911)
chr2 (42-187)||(34286043-34286188)
chr2 (42-187)||(34291103-34291248)
chr2 (173-250)||(34303644-34303721)
chr2 (42-250)||(11635533-11635741)
chr2 (42-250)||(11641722-11641930)
chr2 (45-250)||(19416843-19417048)
chr2 (173-250)||(27118511-27118588)
chr2 (42-250)||(22926372-22926580)
chr2 (42-250)||(31875970-31876178)
chr2 (42-250)||(34861369-34861577)
chr2 (42-250)||(37686253-37686461)
chr2 (42-250)||(37701518-37701726)
chr2 (21-133)||(39052289-39052401)
[»] chr8 (22 HSPs)
chr8 (2-254)||(22081182-22081434)
chr8 (18-250)||(16283118-16283350)
chr8 (2-184)||(19687751-19687933)
chr8 (2-250)||(28362269-28362517)
chr8 (42-181)||(2137642-2137781)
chr8 (42-181)||(16277247-16277386)
chr8 (45-250)||(31490064-31490269)
chr8 (42-166)||(14557320-14557444)
chr8 (39-250)||(19674128-19674339)
chr8 (42-181)||(27609288-27609427)
chr8 (173-250)||(44562928-44563005)
chr8 (42-250)||(19208674-19208882)
chr8 (42-250)||(19286158-19286366)
chr8 (27-250)||(29828991-29829214)
chr8 (173-250)||(9354449-9354526)
chr8 (173-250)||(19659350-19659427)
chr8 (42-250)||(3329833-3330041)
chr8 (42-250)||(18710279-18710487)
chr8 (42-250)||(19518457-19518665)
chr8 (45-250)||(33258419-33258624)
chr8 (42-250)||(31354217-31354425)
chr8 (27-250)||(12093047-12093270)
[»] chr4 (24 HSPs)
chr4 (2-254)||(15391683-15391936)
chr4 (2-250)||(14235880-14236128)
chr4 (16-250)||(15227555-15227789)
chr4 (18-250)||(1899944-1900176)
chr4 (16-250)||(15285280-15285514)
chr4 (42-184)||(14664726-14664868)
chr4 (42-250)||(31126873-31127081)
chr4 (42-181)||(17013708-17013847)
chr4 (42-250)||(14098249-14098457)
chr4 (45-244)||(33674171-33674370)
chr4 (2-187)||(24592729-24592914)
chr4 (42-250)||(5005578-5005786)
chr4 (42-250)||(19372969-19373177)
chr4 (42-238)||(21969409-21969605)
chr4 (42-250)||(27163672-27163880)
chr4 (42-250)||(30753450-30753658)
chr4 (42-250)||(54833098-54833306)
chr4 (42-181)||(6569561-6569700)
chr4 (42-241)||(39850331-39850530)
chr4 (45-250)||(18800977-18801182)
chr4 (173-250)||(24460957-24461034)
chr4 (42-250)||(14763659-14763867)
chr4 (42-181)||(36344936-36345075)
chr4 (42-250)||(40105993-40106201)
[»] chr1 (7 HSPs)
chr1 (16-254)||(16208376-16208614)
chr1 (16-250)||(20460774-20461008)
chr1 (42-250)||(10962362-10962570)
chr1 (42-250)||(51637910-51638118)
chr1 (173-250)||(20340687-20340764)
chr1 (42-250)||(41793663-41793871)
chr1 (45-250)||(28584676-28584881)
[»] chr3 (56 HSPs)
chr3 (16-250)||(18530025-18530259)
chr3 (16-250)||(16626899-16627132)
chr3 (18-250)||(15893102-15893334)
chr3 (42-181)||(8295629-8295768)
chr3 (39-250)||(7996213-7996424)
chr3 (39-250)||(10642721-10642932)
chr3 (42-250)||(8301660-8301868)
chr3 (42-250)||(22871270-22871478)
chr3 (42-250)||(22886329-22886537)
chr3 (42-181)||(4797118-4797257)
chr3 (42-181)||(18050916-18051055)
chr3 (42-244)||(7072866-7073068)
chr3 (42-187)||(4721285-4721430)
chr3 (42-187)||(35880420-35880565)
chr3 (42-250)||(5466639-5466847)
chr3 (42-250)||(18330328-18330536)
chr3 (42-250)||(47023107-47023315)
chr3 (42-181)||(15741547-15741686)
chr3 (39-250)||(28116353-28116564)
chr3 (45-250)||(5596762-5596967)
chr3 (42-187)||(8211395-8211540)
chr3 (45-250)||(36997485-36997690)
chr3 (39-187)||(10395787-10395935)
chr3 (42-250)||(17985352-17985560)
chr3 (42-250)||(29149151-29149359)
chr3 (45-241)||(51781668-51781864)
chr3 (27-250)||(6542870-6543093)
chr3 (42-241)||(20577267-20577466)
chr3 (42-187)||(6191970-6192115)
chr3 (42-250)||(5013366-5013574)
chr3 (42-250)||(11110757-11110965)
chr3 (42-250)||(18224845-18225053)
chr3 (42-250)||(18242381-18242589)
chr3 (42-168)||(4347162-4347288)
chr3 (173-250)||(5652175-5652252)
chr3 (173-250)||(5713012-5713089)
chr3 (173-250)||(5723922-5723999)
chr3 (173-250)||(5757478-5757555)
chr3 (173-250)||(5768369-5768446)
chr3 (173-250)||(17994177-17994254)
chr3 (45-241)||(51796756-51796953)
chr3 (42-250)||(18277448-18277656)
chr3 (42-250)||(18292749-18292957)
chr3 (42-250)||(18308050-18308258)
chr3 (39-250)||(28338953-28339164)
chr3 (173-250)||(4625732-4625809)
chr3 (42-163)||(21674347-21674468)
chr3 (45-250)||(24327816-24328021)
chr3 (42-250)||(29665381-29665589)
chr3 (42-250)||(31964869-31965077)
chr3 (42-250)||(50134467-50134675)
chr3 (42-241)||(48465569-48465768)
chr3 (42-168)||(28020932-28021058)
chr3 (42-255)||(4416570-4416783)
chr3 (42-163)||(5609805-5609926)
chr3 (86-181)||(20065744-20065839)
[»] scaffold0124 (2 HSPs)
scaffold0124 (16-250)||(20079-20313)
scaffold0124 (42-181)||(30146-30285)
[»] chr7 (29 HSPs)
chr7 (16-250)||(16040994-16041228)
chr7 (16-250)||(16450236-16450470)
chr7 (18-250)||(16518657-16518889)
chr7 (39-250)||(45387034-45387245)
chr7 (18-250)||(16503621-16503853)
chr7 (42-181)||(10917175-10917314)
chr7 (42-181)||(2154267-2154406)
chr7 (2-250)||(9618305-9618553)
chr7 (42-250)||(31124605-31124813)
chr7 (42-241)||(3444988-3445187)
chr7 (42-168)||(11425099-11425225)
chr7 (42-187)||(5127686-5127831)
chr7 (45-250)||(11441257-11441462)
chr7 (42-250)||(4145364-4145572)
chr7 (42-250)||(5147581-5147789)
chr7 (42-250)||(24592782-24592990)
chr7 (42-187)||(16736764-16736909)
chr7 (42-187)||(16751818-16751963)
chr7 (42-187)||(17523226-17523371)
chr7 (42-187)||(17529844-17529989)
chr7 (173-250)||(31088702-31088779)
chr7 (173-250)||(45733288-45733365)
chr7 (42-250)||(26275335-26275543)
chr7 (42-241)||(26485994-26486193)
chr7 (42-250)||(26320110-26320318)
chr7 (42-250)||(26670155-26670363)
chr7 (42-241)||(26538123-26538322)
chr7 (42-187)||(31564703-31564848)
chr7 (42-250)||(26434951-26435159)
[»] chr5 (48 HSPs)
chr5 (18-250)||(23891884-23892116)
chr5 (18-250)||(25198710-25198942)
chr5 (18-181)||(24688478-24688641)
chr5 (18-184)||(24951788-24951954)
chr5 (42-250)||(30168171-30168379)
chr5 (42-250)||(33516058-33516266)
chr5 (42-250)||(8665727-8665935)
chr5 (42-250)||(9317153-9317361)
chr5 (42-250)||(24681139-24681347)
chr5 (42-250)||(24723666-24723874)
chr5 (42-181)||(11549056-11549195)
chr5 (39-250)||(15759109-15759320)
chr5 (42-181)||(23718309-23718448)
chr5 (42-181)||(23752771-23752910)
chr5 (42-181)||(30934338-30934477)
chr5 (42-187)||(33777189-33777334)
chr5 (42-250)||(2510753-2510961)
chr5 (42-250)||(18375664-18375872)
chr5 (42-250)||(18501000-18501208)
chr5 (2-250)||(26480054-26480302)
chr5 (42-250)||(37771251-37771459)
chr5 (42-250)||(43077951-43078159)
chr5 (42-181)||(22999435-22999574)
chr5 (42-241)||(40473813-40474012)
chr5 (42-250)||(3789228-3789436)
chr5 (42-250)||(5637612-5637820)
chr5 (42-250)||(6874004-6874212)
chr5 (42-250)||(30151720-30151928)
chr5 (42-250)||(31431130-31431338)
chr5 (42-250)||(31826671-31826879)
chr5 (42-250)||(37671744-37671952)
chr5 (42-181)||(15659081-15659220)
chr5 (42-168)||(9548877-9549003)
chr5 (173-250)||(11325630-11325707)
chr5 (173-250)||(13184897-13184974)
chr5 (173-250)||(13440743-13440820)
chr5 (173-250)||(33877083-33877160)
chr5 (42-187)||(37754670-37754815)
chr5 (42-250)||(12131857-12132065)
chr5 (27-250)||(37358907-37359130)
chr5 (45-168)||(41674414-41674537)
chr5 (42-250)||(34616223-34616431)
chr5 (42-187)||(13325159-13325304)
chr5 (45-250)||(28648931-28649136)
chr5 (45-250)||(29967318-29967523)
chr5 (45-250)||(30029120-30029325)
chr5 (42-250)||(32599721-32599929)
chr5 (42-133)||(28960167-28960258)
[»] scaffold0089 (3 HSPs)
scaffold0089 (42-203)||(40471-40632)
scaffold0089 (42-250)||(29456-29664)
scaffold0089 (2-168)||(47422-47588)
[»] chr6 (40 HSPs)
chr6 (42-181)||(24863407-24863546)
chr6 (42-250)||(30558314-30558522)
chr6 (42-181)||(13299318-13299457)
chr6 (42-181)||(26999763-26999902)
chr6 (42-184)||(24304982-24305124)
chr6 (42-187)||(26918070-26918215)
chr6 (42-250)||(3695753-3695961)
chr6 (42-181)||(15424684-15424823)
chr6 (42-181)||(26988691-26988830)
chr6 (42-250)||(29549168-29549376)
chr6 (42-241)||(34463668-34463867)
chr6 (42-168)||(16749544-16749670)
chr6 (42-250)||(4524979-4525187)
chr6 (42-250)||(27007402-27007610)
chr6 (42-250)||(29501096-29501304)
chr6 (42-181)||(22935244-22935383)
chr6 (42-181)||(23857689-23857828)
chr6 (42-187)||(4757451-4757596)
chr6 (42-187)||(4772687-4772832)
chr6 (173-250)||(13522368-13522445)
chr6 (137-250)||(22477571-22477684)
chr6 (173-250)||(28162481-28162558)
chr6 (173-250)||(33374551-33374628)
chr6 (2-168)||(20160357-20160520)
chr6 (2-168)||(22172311-22172474)
chr6 (42-250)||(27044080-27044288)
chr6 (173-250)||(8892605-8892682)
chr6 (173-250)||(8903840-8903917)
chr6 (45-250)||(16944325-16944530)
chr6 (42-250)||(17024952-17025160)
chr6 (42-250)||(26777925-26778133)
chr6 (42-250)||(27484807-27485015)
chr6 (42-250)||(29572703-29572911)
chr6 (27-250)||(4546082-4546305)
chr6 (27-250)||(28207117-28207340)
chr6 (42-187)||(27360371-27360516)
chr6 (42-187)||(27450714-27450859)
chr6 (27-250)||(4724441-4724664)
chr6 (42-241)||(16673817-16674016)
chr6 (42-133)||(26116834-26116925)
[»] scaffold0143 (1 HSPs)
scaffold0143 (42-181)||(26985-27124)
[»] scaffold0336 (1 HSPs)
scaffold0336 (42-250)||(7925-8133)
[»] scaffold0029 (1 HSPs)
scaffold0029 (2-187)||(548-733)
[»] scaffold0237 (1 HSPs)
scaffold0237 (42-250)||(15285-15493)
[»] scaffold0144 (1 HSPs)
scaffold0144 (42-250)||(26557-26765)
[»] scaffold0260 (1 HSPs)
scaffold0260 (173-250)||(3010-3087)
[»] scaffold0350 (1 HSPs)
scaffold0350 (42-250)||(7594-7802)
[»] scaffold0415 (1 HSPs)
scaffold0415 (42-241)||(5682-5881)
[»] scaffold0038 (1 HSPs)
scaffold0038 (27-250)||(7615-7838)
[»] scaffold0159 (1 HSPs)
scaffold0159 (87-250)||(9421-9584)
[»] scaffold0099 (1 HSPs)
scaffold0099 (18-128)||(48630-48742)


Alignment Details
Target: scaffold0109 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 2 - 254
Target Start/End: Original strand, 21220 - 21472
Alignment:
Q  2 catgggaacccacttagaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcat 101  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21220 catgggaacccgcttagaagaggctgtcagagacggaattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcat 21319  T
Q  102 cataagaagaaagagactgaagtagggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgt 201  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||    
T  21320 cataagaagaaagagacagaagtagggatggtatctgccggaaccagtcaatccgtggctactgttgcccccatcaatgcttctcagctacctccgccgt 21419  T
Q  202 acgagtacatgcaatactctcagcatcctttcttcccaccattctatcaccag 254  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21420 accagtacatgcaatactctcagcatcctttcttcccaccattctatcaccag 21472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 217; Significance: 1e-119; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 2 - 254
Target Start/End: Original strand, 27392642 - 27392894
Alignment:
Q  2 catgggaacccacttagaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcat 101  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27392642 catgggaacccgcttagaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcat 27392741  T
Q  102 cataagaagaaagagactgaagtagggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgt 201  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||| ||||||||||||||||||| ||||    
T  27392742 cataagaagaaagagacagaagtagggatggtatctgccggaaccagtcaatctgtggctactgttgcccccatcgatgctgctcagctacctccaccgt 27392841  T
Q  202 acgagtacatgcaatactctcagcatcctttcttcccaccattctatcaccag 254  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27392842 accagtacatgcaatactctcagcatcctttcttcccaccattctatcaccag 27392894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 16 - 250
Target Start/End: Complemental strand, 19456996 - 19456762
Alignment:
Q  16 tagaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaaga 115  Q
    ||||||| ||||||||||| ||||||||||| || ||||||| ||||||||| ||||||||||||| || ||| ||||| ||||||||||||||||||||    
T  19456996 tagaagaagctgtcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaaga 19456897  T
Q  116 gactgaagtagggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaa 215  Q
     || |||||||||||||||| ||||||| |  ||||||||||||||||||||| ||| || |||||||| ||| |||||||| |||||   ||   ||||    
T  19456896 aacagaagtagggatggtatctgccggagctggtcaatccatggctactgttgcccctattaatgctgcccagttacctccgtcgtacccatatgcgcaa 19456797  T
Q  216 tactctcagcatcctttcttcccaccattctatca 250  Q
    |||| ||||||||||||||| ||||||||||||||    
T  19456796 tactttcagcatcctttctttccaccattctatca 19456762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 16 - 250
Target Start/End: Complemental strand, 21703739 - 21703505
Alignment:
Q  16 tagaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaaga 115  Q
    ||||||| ||||||||||| ||||||||||| || ||||||| ||||||||||| ||||||||||| ||  || ||||| ||||||||||||||||||||    
T  21703739 tagaagaagctgtcagagaaggcattattgtattcgagaaagttgaatcctctgtaaatgcatcaaagagatacggtaacggtcatcataagaagaaaga 21703640  T
Q  116 gactgaagtagggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaa 215  Q
     || |||||||||||||||| ||||||| || ||||||||||||||||||||| ||| || ||||||||  || |||||||| |||||   ||   || |    
T  21703639 aacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcctagttacctccgtcgtacccatatgcgcca 21703540  T
Q  216 tactctcagcatcctttcttcccaccattctatca 250  Q
    |||||||||||||| ||||| ||||||||||||||    
T  21703539 tactctcagcatcccttctttccaccattctatca 21703505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 250
Target Start/End: Complemental strand, 27435020 - 27434788
Alignment:
Q  18 gaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagaga 117  Q
    ||||| || |||||||| || || |||||||| || |||| |||||||||||  |||||||||| || ||||||||| || || || ||||||||||| |    
T  27435020 gaagaagccgtcagagaaggaatcattgtgttcgaaaaagctgaatcctctgtgaatgcatcaaagaggtatggtaacggacaccacaagaagaaagaaa 27434921  T
Q  118 ctgaagtagggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaata 217  Q
    | |||||||||||||| | ||||||| || |||||||||||||||||||||  || || |||||||| ||  | |||||| |||||   ||   ||  ||    
T  27434920 cggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctattaatgctgcccaaatgcctccgtcgtacccatatgcgccgta 27434821  T
Q  218 ctctcagcatcctttcttcccaccattctatca 250  Q
    |||||||||||||||||| ||||||||||||||    
T  27434820 ctctcagcatcctttctttccaccattctatca 27434788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 261317 - 261109
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  |||||||| | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  261317 attgtgtttgagaaagctgaatcctctgtgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 261218  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  || ||||||||  ||||  | |||||| | |||   |||||||  || |||||||||||||||||||||||    
T  261217 gagccggtcaatcaatggctactgttgctcctatcaatgcaactcaaatgcctccgtcatacccatacatgccgtattctcagcatcctttcttcccacc 261118  T
Q  242 attctatca 250  Q
     || |||||    
T  261117 gttttatca 261109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 181
Target Start/End: Original strand, 28881879 - 28882042
Alignment:
Q  18 gaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagaga 117  Q
    ||||| |||||||| || || || |||||||| ||||||| |||||||||||  |||||||||| || |||||||||||| || || ||||||||||| |    
T  28881879 gaagaagctgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatggtaatggacaccacaagaagaaagaaa 28881978  T
Q  118 ctgaagtagggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgc 181  Q
    | ||| |||||||||| |  || ||| || |||||||||||||||||||||  || ||||||||    
T  28881979 cggaaatagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgc 28882042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 12717157 - 12716949
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||||| | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  12717157 attgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 12717058  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || |||||||||||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || |||||||||||||||||||| ||    
T  12717057 gagccggtcaatccatggctactgttgcacctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatcctttcttcccgcc 12716958  T
Q  242 attctatca 250  Q
    ||| |||||    
T  12716957 attttatca 12716949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 16829890 - 16829682
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||||| | || |||||||||||| || || ||||||||||| |||||||| |||||||| |  || |    
T  16829890 attgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtgtcagctg 16829791  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || |||||||||||||||| ||||  |||||||||||  ||||  | |||||| | |||   || |||| ||| ||||||||||| |||||||||||    
T  16829790 gagccggtcaatccatggctaccgttgctcccatcaatgcaactcaaatgcctccgtcatacccatatatgccatattctcagcatccgttcttcccacc 16829691  T
Q  242 attctatca 250  Q
     || |||||    
T  16829690 gttttatca 16829682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 16891591 - 16891799
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||||| | || |||||||||||| || || ||||||||||| |||||||| |||||||| |  || |    
T  16891591 attgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtgtcagctg 16891690  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || |||||||||||||||| ||||  |||||||||||  ||||  | |||||| | |||   || |||| ||| ||||||||||| |||||||||||    
T  16891691 gagccggtcaatccatggctaccgttgctcccatcaatgcaactcaaatgcctccgtcatacccatatatgccatattctcagcatccgttcttcccacc 16891790  T
Q  242 attctatca 250  Q
     || |||||    
T  16891791 gttttatca 16891799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 21677734 - 21677526
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | |  ||||| | || |||||||||||| || || ||||||||||| |||||||| ||||||||||  || |    
T  21677734 attgtgtttgagaaagctgaatcttctacgagcgcatcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctg 21677635  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  || |||||||| |||||  | |||||||| |||   || ||||  || ||||||||||||||||| || ||    
T  21677634 gagccggtcaatcaatggctactgttgctcctatcaatgcagctcaaatgcctccgccatacccatatatgccgtattctcagcatcctttctttccgcc 21677535  T
Q  242 attctatca 250  Q
    ||| |||||    
T  21677534 attttatca 21677526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 42 - 181
Target Start/End: Complemental strand, 23129118 - 23128979
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  |||||||||| || ||||||||| || || || ||||||||||| || |||||||||||||| |  || |    
T  23129118 attgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatggtaacggacaccacaagaagaaagaaacggaagtagggatggtgtcagctg 23129019  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgc 181  Q
    || || |||||||||||||||||||||  || ||||||||    
T  23129018 gagccggtcaatccatggctactgttgctcctatcaatgc 23128979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 32049487 - 32049695
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | ||| || | || |||||||||||| || || ||||| ||||| || ||||| |||||||| |  || |    
T  32049487 attgtgtttgagaaagctgaatcttctacgagtgcctcgaagaggtatggtaatggacaccacaagaaaaaagaaacggaagtggggatggtgtcagctg 32049586  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  ||||||||||| |||||  | |||||||| |||   || ||||  || |||||||||||||||||||| ||    
T  32049587 gagccggtcaatcaatggctactgttgctcccatcaatgcagctcaaatgcctccgccatacccatatatgccgtattctcagcatcctttcttcccgcc 32049686  T
Q  242 attctatca 250  Q
    ||| |||||    
T  32049687 attttatca 32049695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 12655231 - 12655370
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||| ||||||  |||||||||| || |||||||||||| || || ||||||||||| || |||||||| ||||| |  | ||    
T  12655231 attgtgttcgagaaagctgaaccctctgtgaatgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtaggaatggtgtcagtcg 12655330  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgc 181  Q
    || || |||||||||||||||||||||  || ||||||||    
T  12655331 gagccggtcaatccatggctactgttgctcctatcaatgc 12655370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 20837607 - 20837746
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| ||||||| |||  |||||||||| || |||||||||||| || || ||||||||||| || |||||||| ||||| |  | ||    
T  20837607 attgtgttcgagaaagctgaatccactgtgaatgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtaggaatggtgtcagtcg 20837706  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgc 181  Q
    || || |||||||||||||||||||||  || ||||||||    
T  20837707 gagccggtcaatccatggctactgttgctcctatcaatgc 20837746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 244
Target Start/End: Complemental strand, 13937096 - 13936894
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  ||||| || | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  13937096 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 13936997  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || |||||||||||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||||||||| || ||    
T  13936996 gagccggtcaatccatggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatcctttctttccgcc 13936897  T
Q  242 att 244  Q
    |||    
T  13936896 att 13936894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 244
Target Start/End: Original strand, 34279138 - 34279340
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  ||| | || | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  34279138 attgtgtttgagaaagctgaatcctctgtgaatacgtcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgg 34279237  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || |||||||||||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||||||||| || ||    
T  34279238 gagccggtcaatccatggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatcctttctttccgcc 34279337  T
Q  242 att 244  Q
    |||    
T  34279338 att 34279340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 31891746 - 31891669
Alignment:
Q  173 catcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccattctatca 250  Q
    ||||||||||||||||||||||||| |||||  |||   |||||||||||||||||||||||| ||||||||||||||    
T  31891746 catcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagcatcctttctttccaccattctatca 31891669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 37925182 - 37925390
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  | |||||| | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  37925182 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 37925281  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  37925282 gagccggtcaatcaatggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 37925381  T
Q  242 attctatca 250  Q
     || |||||    
T  37925382 gttttatca 37925390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 39889751 - 39889959
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||||| | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  39889751 attgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 39889850  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||||||||| |||||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  39889851 gagccggtcaatccatggccactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 39889950  T
Q  242 attctatca 250  Q
     || |||||    
T  39889951 gttttatca 39889959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 241
Target Start/End: Complemental strand, 9350546 - 9350347
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  ||||| || | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  9350546 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 9350447  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| ||| |||||||||  || ||||||||  ||||  | |||||| | |||   |||||||  || |||||||||||||||||||||||    
T  9350446 gagccggtcaatcaatgactactgttgctcctatcaatgcaactcaaatgcctccgtcatacccatacatgccgtattctcagcatcctttcttcccacc 9350347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 241
Target Start/End: Original strand, 12586490 - 12586689
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  ||||| || | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  12586490 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 12586589  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||||||| |||||||||  || ||||||||  ||||  | |||||| | ||    |||||||  || |||||||||||||||||||||||    
T  12586590 gagccggtcaatccatgactactgttgctcctatcaatgcaactcaaatgcctccgtcatatccatacatgccgtattctcagcatcctttcttcccacc 12586689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 241
Target Start/End: Original strand, 27776896 - 27777095
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  ||||| || | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  27776896 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 27776995  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| ||| |||||||||  || ||||||||  ||||  | |||||| | |||   |||||||  || |||||||||||||||||||||||    
T  27776996 gagccggtcaatcaatgactactgttgctcctatcaatgcaactcaaatgcctccgtcatacccatacatgccgtattctcagcatcctttcttcccacc 27777095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 241
Target Start/End: Original strand, 27803381 - 27803580
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  ||||| || | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  27803381 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 27803480  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| ||| |||||||||  || ||||||||  ||||  | |||||| | |||   |||||||  || |||||||||||||||||||||||    
T  27803481 gagccggtcaatcaatgactactgttgctcctatcaatgcaactcaaatgcctccgtcatacccatacatgccgtattctcagcatcctttcttcccacc 27803580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 241
Target Start/End: Original strand, 27816663 - 27816862
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  ||||| || | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  27816663 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 27816762  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| ||| |||||||||  || ||||||||  ||||  | |||||| | |||   |||||||  || |||||||||||||||||||||||    
T  27816763 gagccggtcaatcaatgactactgttgctcctatcaatgcaactcaaatgcctccgtcatacccatacatgccgtattctcagcatcctttcttcccacc 27816862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 241
Target Start/End: Original strand, 40233188 - 40233387
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  ||||| || | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  40233188 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 40233287  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||| ||||  || |||||||| |||||  | |||||| | |||   || ||||  |||||||||||||| |||||||||||    
T  40233288 gagccggtcaatcaatggctaccgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtactctcagcatccgttcttcccacc 40233387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 168
Target Start/End: Original strand, 37374850 - 37374976
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  |||||||| | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  37374850 attgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 37374949  T
Q  142 gaaccagtcaatccatggctactgttg 168  Q
    || || ||||||| |||||||||||||    
T  37374950 gagccggtcaatcaatggctactgttg 37374976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 3784477 - 3784554
Alignment:
Q  173 catcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccattctatca 250  Q
    ||||||||||||||||||||||||| |||||  |||   |||||||||||||||||| ||||| ||||||||||||||    
T  3784477 catcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatca 3784554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 16163422 - 16163499
Alignment:
Q  173 catcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccattctatca 250  Q
    ||||||||||||||||||||||||| |||||  |||   |||||||||||||||||| ||||| ||||||||||||||    
T  16163422 catcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatca 16163499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 34156834 - 34156911
Alignment:
Q  173 catcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccattctatca 250  Q
    ||||||||||||||||||||||||| |||||  |||   |||||||||||||||||| ||||| ||||||||||||||    
T  34156834 catcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatca 34156911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 42 - 187
Target Start/End: Original strand, 34286043 - 34286188
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  | |||||| | ||  ||||||||||| || || ||||||||||| || |||||||||||||| |  |  |    
T  34286043 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcaggtg 34286142  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctca 187  Q
    || || ||||||||||||| |||||||  || |||||||| |||||    
T  34286143 gagccggtcaatccatggccactgttgctcctatcaatgcggctca 34286188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 42 - 187
Target Start/End: Original strand, 34291103 - 34291248
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  | |||||| | ||  ||||||||||| || || ||||||||||| || |||||||||||||| |  |  |    
T  34291103 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcaggtg 34291202  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctca 187  Q
    || || ||||||||||||| |||||||  || |||||||| |||||    
T  34291203 gagccggtcaatccatggccactgttgctcctatcaatgcggctca 34291248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 34303721 - 34303644
Alignment:
Q  173 catcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccattctatca 250  Q
    ||||||||||||||||||||||||| |||||  |||   |||||||||||||||||| ||||| ||||||||||||||    
T  34303721 catcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatca 34303644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 11635741 - 11635533
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||||| | ||| |  | || |||||||||||| || || |||||||||||  | ||||| |||||||| |  || |    
T  11635741 attgtgtttgagaaagctgaatcttctgcgagtgcgttgaagaggtatggtaatggacaccacaagaagaaagaagcggaagtggggatggtgtcagcag 11635642  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || |||||||||||||||| ||||  || |||||||| |||||  | |||||| | |||   || ||||  || |||||||||||||||||||| ||    
T  11635641 gagccggtcaatccatggctaccgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatcctttcttcccgcc 11635542  T
Q  242 attctatca 250  Q
    ||| |||||    
T  11635541 attttatca 11635533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 11641930 - 11641722
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||||| | ||| |  | || |||||||||||| || || |||||||||||  | ||||| |||||||| |  || |    
T  11641930 attgtgtttgagaaagctgaatcttctgcgagtgcgttgaagaggtatggtaatggacaccacaagaagaaagaagcggaagtggggatggtgtcagcag 11641831  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || |||||||||||||||| ||||  || |||||||| |||||  | |||||| | |||   || ||||  || |||||||||||||||||||| ||    
T  11641830 gagccggtcaatccatggctaccgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatcctttcttcccgcc 11641731  T
Q  242 attctatca 250  Q
    ||| |||||    
T  11641730 attttatca 11641722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 45 - 250
Target Start/End: Complemental strand, 19417048 - 19416843
Alignment:
Q  45 gtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccggaa 144  Q
    ||||||||||||| |||||||||||  ||||| || | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |||     
T  19417048 gtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggag 19416949  T
Q  145 ccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccatt 244  Q
    || | ||||| |||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| ||||||||||| ||    
T  19416948 ccgggcaatcaatggctactgttgctcctatcaatgcggctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccaccgtt 19416849  T
Q  245 ctatca 250  Q
     |||||    
T  19416848 ttatca 19416843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 27118511 - 27118588
Alignment:
Q  173 catcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccattctatca 250  Q
    ||||||||||||||||||||||||| |||||  | |   |||||||||||||||||| ||||| ||||||||||||||    
T  27118511 catcaatgctgctcagctacctccgtcgtacccgcatgcgcaatactctcagcatcccttctttccaccattctatca 27118588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 22926580 - 22926372
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | |  ||||| | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  22926580 attgtgtttgagaaagctgaatcttctacgagcgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgg 22926481  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || |||||||||||||||| || |  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  22926480 gagccggtcaatccatggctaccgtcgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 22926381  T
Q  242 attctatca 250  Q
     || |||||    
T  22926380 gttttatca 22926372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 31875970 - 31876178
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||||| |  | ||| |||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  31875970 attgtgtttgagaaagctgaatcttctacgagtgcatcgaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 31876069  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  31876070 gagccggtcaatcaatggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 31876169  T
Q  242 attctatca 250  Q
     || |||||    
T  31876170 gttttatca 31876178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 34861369 - 34861577
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||||| |  | ||| |||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  34861369 attgtgtttgagaaagctgaatcttctacgagtgcatcgaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 34861468  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  34861469 gagccggtcaatcaatggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 34861568  T
Q  242 attctatca 250  Q
     || |||||    
T  34861569 gttttatca 34861577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 37686461 - 37686253
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||||| |  | ||| |||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  37686461 attgtgtttgagaaagctgaatcttctacgagtgcatcgaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 37686362  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  37686361 gagccggtcaatcaatggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 37686262  T
Q  242 attctatca 250  Q
     || |||||    
T  37686261 gttttatca 37686253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 37701726 - 37701518
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||||| |  | ||| |||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  37701726 attgtgtttgagaaagctgaatcttctacgagtgcatcgaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 37701627  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  37701626 gagccggtcaatcaatggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 37701527  T
Q  242 attctatca 250  Q
     || |||||    
T  37701526 gttttatca 37701518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 133
Target Start/End: Complemental strand, 39052401 - 39052289
Alignment:
Q  21 gaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactg 120  Q
    |||||||| || || || || |||||||||||||||| |||||||||||  ||||| || | ||  ||||||||||| || || ||||||||||| || |    
T  39052401 gaggctgtaagggatggaatcattgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacgg 39052302  T
Q  121 aagtagggatggt 133  Q
    |||| || |||||    
T  39052301 aagtgggaatggt 39052289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 209; Significance: 1e-114; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 2 - 254
Target Start/End: Complemental strand, 22081434 - 22081182
Alignment:
Q  2 catgggaacccacttagaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcat 101  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||    
T  22081434 catgggaacccgcttagaagaggctgtcagagatggcattattgtgtttgaaaaatgtgaatcctctgcaaatgcatcaaggaagtatggcaatggtcat 22081335  T
Q  102 cataagaagaaagagactgaagtagggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgt 201  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22081334 cataagaagaaagagacagaagtagggatggtatctgccggaaccagtcaatccatggctactgttgcccccatcaatgctgctcagctacctccgccgt 22081235  T
Q  202 acgagtacatgcaatactctcagcatcctttcttcccaccattctatcaccag 254  Q
    |  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22081234 atcagtacatgcaatactctcagcatcctttcttcccaccattttatcaccag 22081182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 18 - 250
Target Start/End: Original strand, 16283118 - 16283350
Alignment:
Q  18 gaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagaga 117  Q
    ||||| || |||||||| || || ||||| || ||||||| |||||||||||  |||||||||| || ||||||||| || || || ||||||||||| |    
T  16283118 gaagaagccgtcagagaaggaatcattgtattcgagaaagctgaatcctctgtgaatgcatcaaagaggtatggtaacggacaccacaagaagaaagaaa 16283217  T
Q  118 ctgaagtagggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaata 217  Q
    | |||||||||||||| | ||||||| || |||||||||||||||||||||  || || |||||||| ||  | |||||| |||||   ||   ||  ||    
T  16283218 cggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctattaatgctgcccaaatgcctccgtcgtacccatatgcgccgta 16283317  T
Q  218 ctctcagcatcctttcttcccaccattctatca 250  Q
    |||||||||||||||||| || |||||||||||    
T  16283318 ctctcagcatcctttctttccgccattctatca 16283350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 184
Target Start/End: Original strand, 19687751 - 19687933
Alignment:
Q  2 catgggaacccacttagaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcat 101  Q
    |||||||||||   | ||||| || ||||| || || || |||||||| ||||||| |||||||||||  |||||||||| || |||||||||||| ||     
T  19687751 catgggaacccgtctggaagaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatggtaatggacac 19687850  T
Q  102 cataagaagaaagagactgaagtagggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgctgc 184  Q
    || ||||||||||| || |||||||||||||| |  |||||| || |||||||||||||||||||||  || |||||||||||    
T  19687851 cacaagaagaaagaaacggaagtagggatggtgtcagccggagccggtcaatccatggctactgttgctcctatcaatgctgc 19687933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 250
Target Start/End: Complemental strand, 28362517 - 28362269
Alignment:
Q  2 catgggaacccacttagaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcat 101  Q
    ||||||||||| | | || || || ||||| || || || |||||||||||||||| |||||||||||  | |||||| | ||  ||||||||||| ||     
T  28362517 catgggaacccgccttgaggaagccgtcagggatgggatcattgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacac 28362418  T
Q  102 cataagaagaaagagactgaagtagggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgt 201  Q
    || ||||||||||| |||||||| ||||||||||  || ||| || |||||||||||||||| ||||  ||||||||||| |||||  | |||||| | |    
T  28362417 cacaagaagaaagaaactgaagtggggatggtatcagctggagccggtcaatccatggctaccgttgctcccatcaatgcagctcaaatgcctccgtcat 28362318  T
Q  202 acgagtacatgcaatactctcagcatcctttcttcccaccattctatca 250  Q
    ||   || ||||  || ||||||||||| ||||||||||| || |||||    
T  28362317 acccatatatgccgtattctcagcatccgttcttcccaccgttttatca 28362269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 42 - 181
Target Start/End: Complemental strand, 2137781 - 2137642
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  |||||||||| || |||||||||||| || || ||||||||||| || |||||||||||||| |  || |    
T  2137781 attgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctg 2137682  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgc 181  Q
    || || |||||||||||||||||||||  || ||||||||    
T  2137681 gagccggtcaatccatggctactgttgctcctatcaatgc 2137642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 16277247 - 16277386
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  |||||||||| || |||||||||||| || || ||||||||||| || |||||||||||||| |  || |    
T  16277247 attgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctg 16277346  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgc 181  Q
    || || |||||||||||||||||||||  || ||||||||    
T  16277347 gagccggtcaatccatggctactgttgctcctatcaatgc 16277386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 45 - 250
Target Start/End: Complemental strand, 31490269 - 31490064
Alignment:
Q  45 gtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccggaa 144  Q
    ||||||||||||| |||||||||||  ||||| || | ||  ||||||||||| || || ||||||||||| |||||||| |||||||| |  || |||     
T  31490269 gtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaactgaagtggggatggtgtcagctggag 31490170  T
Q  145 ccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccatt 244  Q
    || ||||||| ||||||||||||| ||| |||||||| |||||  | |||||| | |||   || |||| ||| ||||||||||| ||||||||||| ||    
T  31490169 ccggtcaatcaatggctactgttgcccctatcaatgcagctcaaatgcctccgtcatacccatatatgccatattctcagcatccgttcttcccaccgtt 31490070  T
Q  245 ctatca 250  Q
     |||||    
T  31490069 ttatca 31490064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 42 - 166
Target Start/End: Original strand, 14557320 - 14557444
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  |||||||||| || |||||||||||| || || ||||||||||| || |||||||||||||| |  || |    
T  14557320 attgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctg 14557419  T
Q  142 gaaccagtcaatccatggctactgt 166  Q
    || || |||||||||||||||||||    
T  14557420 gagccggtcaatccatggctactgt 14557444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 39 - 250
Target Start/End: Original strand, 19674128 - 19674339
Alignment:
Q  39 attattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatg 138  Q
    ||||||||||| ||||||| |||||| ||||| | ||| || | || |||||||||||| ||||| ||||||||||| || || || |||||||| |  |    
T  19674128 attattgtgttcgagaaagctgaatcttctgcgagtgcgtcgaagaggtatggtaatggacatcacaagaagaaagaaacggacgtggggatggtgtcag 19674227  T
Q  139 ccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttccc 238  Q
    | ||| ||||||||||||||||||| ||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||||||||| ||    
T  19674228 ctggagccagtcaatccatggctaccgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatcctttctttcc 19674327  T
Q  239 accattctatca 250  Q
     ||||| |||||    
T  19674328 gccattttatca 19674339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 42 - 181
Target Start/End: Complemental strand, 27609427 - 27609288
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| |||||||  ||||||||||  |||||||||| || |||||||||||| || || ||||||||||| || ||| |||||||||| |  || |    
T  27609427 attgtgttcgagaaagccgaatcctctgtgaatgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaaatagggatggtgtcagctg 27609328  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgc 181  Q
    || || |||||||||||||||||||||  || ||||||||    
T  27609327 gagccggtcaatccatggctactgttgctcctatcaatgc 27609288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 44562928 - 44563005
Alignment:
Q  173 catcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccattctatca 250  Q
    ||||||||||||||||||||||||| |||||  |||   |||||||||||||||||||||||| ||||||||||||||    
T  44562928 catcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagcatcctttctttccaccattctatca 44563005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 19208882 - 19208674
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||||| | |||||| |||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  19208882 attgtgtttgagaaagctgaatcttctacgagtgcatcgaagaagtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 19208783  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  19208782 gagccggtcaatcaatggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 19208683  T
Q  242 attctatca 250  Q
     || |||||    
T  19208682 gttttatca 19208674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 19286158 - 19286366
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||||| | ||| || | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  19286158 attgtgtttgagaaagctgaatcttctgcgagtgcgtcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgg 19286257  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||||||||| |||||||  || |||||||| |||||  | |||||| | |||   ||  |||  |||||||||||||| |||||||||||    
T  19286258 gagccggtcaatccatggccactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatgtgccgtactctcagcatccgttcttcccacc 19286357  T
Q  242 attctatca 250  Q
     || |||||    
T  19286358 gttttatca 19286366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 250
Target Start/End: Original strand, 29828991 - 29829214
Alignment:
Q  27 gtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtag 126  Q
    |||||||| || || |||||||||||||||| |||||||||||  ||||| || | ||  ||||||||||| || || ||||||||||| || ||||| |    
T  29828991 gtcagagatggaatcattgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtgg 29829090  T
Q  127 ggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagca 226  Q
    ||||||| |  || ||| || ||||||| |||||||| ||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||    
T  29829091 ggatggtgtcagctggagccggtcaatcaatggctaccgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagca 29829190  T
Q  227 tcctttcttcccaccattctatca 250  Q
    ||| ||||||||||| || |||||    
T  29829191 tccgttcttcccaccgttttatca 29829214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 9354449 - 9354526
Alignment:
Q  173 catcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccattctatca 250  Q
    ||||||||||||||||||||||||| |||||  |||   |||||||||||||||||| ||||| ||||||||||||||    
T  9354449 catcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatca 9354526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 19659427 - 19659350
Alignment:
Q  173 catcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccattctatca 250  Q
    ||||||||||||||||||||||||| |||||  |||   |||||||||||||||||| ||||| ||||||||||||||    
T  19659427 catcaatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagcatcccttctttccaccattctatca 19659350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 3330041 - 3329833
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  ||||| || | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  3330041 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 3329942  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || |||||||||||||||  ||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  3329941 gagccggtcaatccatggctatcgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccattcttcccacc 3329842  T
Q  242 attctatca 250  Q
     || |||||    
T  3329841 gttttatca 3329833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 18710279 - 18710487
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  |||||||| | || |||||||||||| || || ||||||||||| || ||||| || ||||| |  || |    
T  18710279 attgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctg 18710378  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||| ||||  || |||||||| |||||  | |||||| | |||   ||  |||  |||||||||||||| |||||||||||    
T  18710379 gagccggtcaatcaatggctaccgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatgtgccgtactctcagcatccgttcttcccacc 18710478  T
Q  242 attctatca 250  Q
     || |||||    
T  18710479 gttttatca 18710487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 19518665 - 19518457
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  ||||| || | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  19518665 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 19518566  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| ||| |||||||||  || ||||||||  ||||  | |||||| | |||   || ||||  || |||||||||||||||||||| ||    
T  19518565 gagccggtcaatcaatgactactgttgctcctatcaatgcaactcaaatgcctccgtcatacccatatatgccgtattctcagcatcctttcttcccgcc 19518466  T
Q  242 attctatca 250  Q
    ||| |||||    
T  19518465 attttatca 19518457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 45 - 250
Target Start/End: Original strand, 33258419 - 33258624
Alignment:
Q  45 gtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccggaa 144  Q
    ||||||||||||| |||||||||||  ||||| || | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |||     
T  33258419 gtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatgggcaccacaagaagaaagaaacggaagtggggatggtgtcagctggag 33258518  T
Q  145 ccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccatt 244  Q
    || | ||||| |||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| ||||||||||| ||    
T  33258519 ccgggcaatcaatggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccaccgtt 33258618  T
Q  245 ctatca 250  Q
     |||||    
T  33258619 ttatca 33258624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 31354217 - 31354425
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | |  ||||| | || |||||||||||| || || ||||||||||| || ||||| ||||||||||  || |    
T  31354217 attgtgtttgagaaagctgaatcttctacgagcgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctg 31354316  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||||||||| || ||||  || |||||||| || ||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  31354317 gagccggtcaatccatggccaccgttgctcctatcaatgcagcccaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 31354416  T
Q  242 attctatca 250  Q
     || |||||    
T  31354417 gttttatca 31354425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 250
Target Start/End: Complemental strand, 12093270 - 12093047
Alignment:
Q  27 gtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtag 126  Q
    |||||||| || || |||||||||||||||| |||||| ||| | | |||||| | ||  ||||||||||| || || ||||||||||| || ||||| |    
T  12093270 gtcagagatgggatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtgg 12093171  T
Q  127 ggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagca 226  Q
    | ||||| |  || | | || | ||||| ||||||||| |||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||    
T  12093170 gaatggtgtcagctgcagccggccaatctatggctactattgctcctatcaatgcagctcaagtgcctccgtcatacccatatatgccgtattctcagca 12093071  T
Q  227 tcctttcttcccaccattctatca 250  Q
    ||| ||||||||||| || |||||    
T  12093070 tccgttcttcccaccgttttatca 12093047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 198; Significance: 1e-108; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 2 - 254
Target Start/End: Complemental strand, 15391936 - 15391683
Alignment:
Q  2 catgggaacccacttagaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcat 101  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15391936 catgggaacccgcttagaagaggctgtcagagatggcattattgtgtttgggaaaggtgaatcctctgcaaatgcatcaaggaagtatggcaatggtcat 15391837  T
Q  102 cataagaagaaagagactgaagtagggatggtatatgccggaaccagtcaatccatggctactg-ttgtccccatcaatgctgctcagctacctccgccg 200  Q
    ||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||    
T  15391836 cataagaagaaagagacagaagtagggatggtatctgctggaaccagtcaatccatggctactgtttgcccccatcaatgttgctcagctacctccgccg 15391737  T
Q  201 tacgagtacatgcaatactctcagcatcctttcttcccaccattctatcaccag 254  Q
    ||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15391736 tatcagtacatgcaatactctcagcatcctttcttcccaccattttatcaccag 15391683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 2 - 250
Target Start/End: Complemental strand, 14236128 - 14235880
Alignment:
Q  2 catgggaacccacttagaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcat 101  Q
    ||||||||||| ||||||||||||||||||||| | |||||||||||| |||||||| |||||||||||||   |||||| |||||| ||||||||||||    
T  14236128 catgggaacccgcttagaagaggctgtcagagaagacattattgtgttcgagaaaggggaatcctctgcaagcacatcaaagaagtacggtaatggtcat 14236029  T
Q  102 cataagaagaaagagactgaagtagggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgt 201  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||  ||| || |||||||||||| |||||| |||||    
T  14236028 cataagaagaaagagacagaagtagggatggtatctgccggaaccagtcaatccatggccactgttacccctattaatgctgctcagttacctctgccgt 14235929  T
Q  202 acgagtacatgcaatactctcagcatcctttcttcccaccattctatca 250  Q
    || |||| |||||||||||||||||||||||||||||||||||||||||    
T  14235928 accagtatatgcaatactctcagcatcctttcttcccaccattctatca 14235880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 16 - 250
Target Start/End: Original strand, 15227555 - 15227789
Alignment:
Q  16 tagaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaaga 115  Q
    ||||||| ||||||||||| ||||||||||| || ||||||| ||||||||| ||||||||||||| || | ||||||| ||||||||||||||||||||    
T  15227555 tagaagaagctgtcagagaaggcattattgtattcgagaaagatgaatcctccgcaaatgcatcaaagaggcatggtaacggtcatcataagaagaaaga 15227654  T
Q  116 gactgaagtagggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaa 215  Q
     || |||||||||||||||| ||||||| |  ||||||||||||||||||||| ||| || |||||||| ||| |||||||| |||||  |||   ||||    
T  15227655 aacagaagtagggatggtatctgccggagctggtcaatccatggctactgttgcccctattaatgctgcccagttacctccgtcgtacccgtatgcgcaa 15227754  T
Q  216 tactctcagcatcctttcttcccaccattctatca 250  Q
    |||||||||||||| ||||| ||||||||||||||    
T  15227755 tactctcagcatcccttctttccaccattctatca 15227789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 18 - 250
Target Start/End: Original strand, 1899944 - 1900176
Alignment:
Q  18 gaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagaga 117  Q
    ||||| ||||||||||| ||||||||||| |||||||||| ||||||||||| ||||||||||| || ||| ||||| | |||||||||||||||||| |    
T  1899944 gaagaagctgtcagagaaggcattattgtatttgagaaagttgaatcctctgtaaatgcatcaaagaggtacggtaacgatcatcataagaagaaagaaa 1900043  T
Q  118 ctgaagtagggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaata 217  Q
    | |||||||||||||||| ||||||| || ||||||||||||||||||||| ||| || |||||||| ||| |||||||| |||||   ||   || |||    
T  1900044 cagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagttacctccgtcgtacccatatgcgccata 1900143  T
Q  218 ctctcagcatcctttcttcccaccattctatca 250  Q
    |||||||||||| ||||| ||||||||||||||    
T  1900144 ctctcagcatcccttctttccaccattctatca 1900176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 16 - 250
Target Start/End: Complemental strand, 15285514 - 15285280
Alignment:
Q  16 tagaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaaga 115  Q
    ||||||| ||||||||||| ||||||||||| || ||||||| ||||||||| ||||||||||||| || | | ||||| ||||||||||||||||||||    
T  15285514 tagaagaagctgtcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggaacggtaacggtcatcataagaagaaaga 15285415  T
Q  116 gactgaagtagggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaa 215  Q
     || |||||| ||||||||| ||||||| |  ||||||||||||||||||||| ||| || |||||||| ||| |||||||   ||||   ||   ||||    
T  15285414 aacagaagtatggatggtatctgccggagctggtcaatccatggctactgttgcccctattaatgctgcccagttacctccattgtacccatatgcgcaa 15285315  T
Q  216 tactctcagcatcctttcttcccaccattctatca 250  Q
    |||||||||||||||||||| ||||||||||||||    
T  15285314 tactctcagcatcctttctttccaccattctatca 15285280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 42 - 184
Target Start/End: Original strand, 14664726 - 14664868
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  |||||||||| || |||||||||||| || || ||||||||||| || |||||||||||||| | |||||    
T  14664726 attgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtctgccg 14664825  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgc 184  Q
    || |  |||||||||||||||||||||  || |||||||||||    
T  14664826 gagctggtcaatccatggctactgttgctcctatcaatgctgc 14664868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 31127081 - 31126873
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||||| | || |||||||||||| || || ||||||||||| |||||||| ||||||||||  || |    
T  31127081 attgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctg 31126982  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  || |||||||| |||||  | |||||| | |||   || |||| ||| ||||||||||| |||||||||||    
T  31126981 gagccggtcaatcaatggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccatattctcagcatccgttcttcccacc 31126882  T
Q  242 attctatca 250  Q
     || |||||    
T  31126881 gttttatca 31126873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 17013708 - 17013847
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  |||||||||| || |||||||||||| || || ||||||||||| || |||||||||||||| |  ||||    
T  17013708 attgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagccg 17013807  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgc 181  Q
    || |  |||||||||||||||||||||  || ||||||||    
T  17013808 gagctggtcaatccatggctactgttgctcctatcaatgc 17013847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 14098249 - 14098457
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| ||||||||||| |||||| || | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  14098249 attgtgtttgagaaagctgaatcctctgtaaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 14098348  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  || |||||||| |||||  | |||||| | |||   || |||| ||| ||||||||||| |||||||||||    
T  14098349 gagccggtcaatcaatggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccatattctcagcatccgttcttcccacc 14098448  T
Q  242 attctatca 250  Q
     || |||||    
T  14098449 gttttatca 14098457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 45 - 244
Target Start/End: Complemental strand, 33674370 - 33674171
Alignment:
Q  45 gtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccggaa 144  Q
    ||||||||||||| ||||||||||| |||||| || | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |||     
T  33674370 gtgtttgagaaagctgaatcctctgtaaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggag 33674271  T
Q  145 ccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccatt 244  Q
    || ||||||| |||||||| ||||  || |||||||| |||||  | |||||| | |||   |||||||  |||||||||||||| ||||||||||||||    
T  33674270 ccggtcaatcaatggctaccgttgctcctatcaatgcagctcaaatgcctccgtcatacccatacatgccgtactctcagcatccgttcttcccaccatt 33674171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 187
Target Start/End: Complemental strand, 24592914 - 24592729
Alignment:
Q  2 catgggaacccacttagaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcat 101  Q
    |||||||||||   | ||||| || ||||| || || || |||||||| ||||||| |||||||||||  |||||||| | || |||||||||||| ||     
T  24592914 catgggaacccgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatggtaatggacac 24592815  T
Q  102 cataagaagaaagagactgaagtagggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgctgctca 187  Q
    || ||||||||||| || ||| |||||||||| |  || ||| || |||||||||||||||||||||  || |||||||| |||||    
T  24592814 cacaagaagaaagaaacggaaatagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagctca 24592729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 5005578 - 5005786
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||||| | | | || | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  5005578 attgtgtttgagaaagctgaatcttctgcgagtacgtcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgg 5005677  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || |||||||||||||||| ||||  ||||||||||| |||||  | |||||| | |||   || ||||  || |||||||||||||||||||| ||    
T  5005678 gagccggtcaatccatggctaccgttgctcccatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatcctttcttcccgcc 5005777  T
Q  242 attctatca 250  Q
    ||| |||||    
T  5005778 attttatca 5005786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 19372969 - 19373177
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  |||||||| | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  19372969 attgtgtttgagaaagctgaatcctctgtgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 19373068  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||| ||||  || |||||||| |||||  | |||||| | |||   ||  |||  |||||||||||||| |||||||||||    
T  19373069 gagccggtcaatctatggctaccgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatgtgccgtactctcagcatccgttcttcccacc 19373168  T
Q  242 attctatca 250  Q
     || |||||    
T  19373169 gttttatca 19373177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 238
Target Start/End: Original strand, 21969409 - 21969605
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||||| | || |||||||||||| || || ||||| ||||| || ||||| |||||||| |  || |    
T  21969409 attgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatggtaatggacaccacaagaaaaaagaaacggaagtggggatggtgtcagctg 21969508  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttccc 238  Q
    || || ||||||| |||||||||||||  ||||||||||| |||||  | |||||||| |||   || ||||  || ||||||||||||||||||||    
T  21969509 gagccggtcaatcaatggctactgttgctcccatcaatgcagctcaaatgcctccgccatacccatatatgccgtattctcagcatcctttcttccc 21969605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 27163880 - 27163672
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||||| |  | ||| |||||||| || || ||||||||||| || ||||| ||||||||||  || |    
T  27163880 attgtgtttgagaaagctgaatcttctacgagtgcatcgaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctg 27163781  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  ||||||||||| |||||  | |||||| | |||   || ||||  || |||||||||||||||||||| ||    
T  27163780 gagccggtcaatcaatggctactgttgctcccatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatcctttcttcccgcc 27163681  T
Q  242 attctatca 250  Q
    ||| |||||    
T  27163680 attttatca 27163672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 30753450 - 30753658
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||||| | || |||||||||||| || || ||||||||||| || ||||| |||||| | |  || |    
T  30753450 attgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatgatgtcagctg 30753549  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || |||||||||||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || |||||||||||||||||||| ||    
T  30753550 gagccggtcaatccatggctactgttgcacctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatcctttcttcccgcc 30753649  T
Q  242 attctatca 250  Q
    ||| |||||    
T  30753650 attttatca 30753658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 54833098 - 54833306
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||||| | ||| || | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  54833098 attgtgtttgagaaagctgaatcttctgcgagtgcgtcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgg 54833197  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||||||||| |||||||  || |||||||| |||||  | |||||| | |||   ||  |||  |||||||||||||| |||||||||||    
T  54833198 gagccggtcaatccatggccactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatgtgccgtactctcagcatccgttcttcccacc 54833297  T
Q  242 attctatca 250  Q
     || |||||    
T  54833298 gttttatca 54833306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 6569561 - 6569700
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||| |||||||| | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  6569561 attgtgtttgagaaagctgaatcctctgcgaatgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 6569660  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgc 181  Q
    || || ||||||| ||||| |||||||  || ||||||||    
T  6569661 gagccggtcaatcaatggccactgttgctcctatcaatgc 6569700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 241
Target Start/End: Original strand, 39850331 - 39850530
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  ||| | || | ||  ||||||||||| || || ||||||||||| || ||||| || ||||| |  || |    
T  39850331 attgtgtttgagaaagctgaatcctctgtgaatacgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctg 39850430  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  || |||||||| |||||  | |||||| | |||   |||||||  |||||||||||||| |||||||||||    
T  39850431 gagccggtcaatcaatggctactgttgcacctatcaatgcagctcaaatgcctccgtcatacccatacatgccgtactctcagcatccgttcttcccacc 39850530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 45 - 250
Target Start/End: Complemental strand, 18801182 - 18800977
Alignment:
Q  45 gtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccggaa 144  Q
    ||||||||||||| |||||||||||  ||||| || | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |||     
T  18801182 gtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacagaagtggggatggtgtcagctggag 18801083  T
Q  145 ccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccatt 244  Q
    || ||||| | |||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || |||||||||||||||||||| |||||    
T  18801082 ccggtcaagctatggctactgttgcacctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatcctttcttcccgccatt 18800983  T
Q  245 ctatca 250  Q
     |||||    
T  18800982 ttatca 18800977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 24461034 - 24460957
Alignment:
Q  173 catcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccattctatca 250  Q
    ||||||||||||||||||||||||| |||||  |||   |||||||||||||||||| ||||| ||||||||||||||    
T  24461034 catcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatca 24460957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 14763867 - 14763659
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  |||||||| | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  14763867 attgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 14763768  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| ||||| |||||||  || ||||||||  ||||  | |||||| | |||   ||  |||  |||||||||||||| |||||||||||    
T  14763767 gagccggtcaatcaatggccactgttgctcctatcaatgcaactcaaatgcctccgtcatacccatatgtgccgtactctcagcatccgttcttcccacc 14763668  T
Q  242 attctatca 250  Q
     || |||||    
T  14763667 gttttatca 14763659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 181
Target Start/End: Complemental strand, 36345075 - 36344936
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  |||||||| | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  36345075 attgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 36344976  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgc 181  Q
    || || ||||||| ||||| |||||||  || ||||||||    
T  36344975 gagccggtcaatcaatggccactgttgctcctatcaatgc 36344936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 40106201 - 40105993
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||||| |  | ||| |||||| | || || ||||||||||| || ||||| |||||||| |  || |    
T  40106201 attgtgtttgagaaagctgaatcttctacgagtgcatcgaaaaggtacggtaatagacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 40106102  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  40106101 gagccggtcaatcaatggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 40106002  T
Q  242 attctatca 250  Q
     || |||||    
T  40106001 gttttatca 40105993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 147; Significance: 1e-77; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 16 - 254
Target Start/End: Complemental strand, 16208614 - 16208376
Alignment:
Q  16 tagaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaaga 115  Q
    ||||||| ||||||||||| ||||||||||| |||||||||| ||||||||||| ||||||||||| ||  || ||||| ||||||||||||||||||||    
T  16208614 tagaagaagctgtcagagaaggcattattgtatttgagaaagttgaatcctctgtaaatgcatcaaagagttacggtaacggtcatcataagaagaaaga 16208515  T
Q  116 gactgaagtagggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaa 215  Q
     || ||||||| |||||||| ||||||| || ||||||||||||||||||||| ||| || |||||||| ||| |||||||||||||  |||||||||||    
T  16208514 aacagaagtagagatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagttacctccgccgtatcagtacatgcaa 16208415  T
Q  216 tactctcagcatcctttcttcccaccattctatcaccag 254  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16208414 tactctcagcatcctttcttcccaccattctatcaccag 16208376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 16 - 250
Target Start/End: Original strand, 20460774 - 20461008
Alignment:
Q  16 tagaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaaga 115  Q
    ||||||| ||||||||||| ||||||||| | || ||||||| ||||||||| || |||||||||| || ||| ||||| ||||||||||||||||||||    
T  20460774 tagaagaagctgtcagagaaggcattattatattcgagaaagttgaatcctccgccaatgcatcaaagaggtacggtaacggtcatcataagaagaaaga 20460873  T
Q  116 gactgaagtagggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaa 215  Q
     |  |||||||||||||||| ||||||| || ||||||||||||||||| ||| ||| || |||||||| ||| ||||||||||||||  |||   ||||    
T  20460874 aatagaagtagggatggtatctgccggagccggtcaatccatggctactattgcccctattaatgctgcccagttacctccgccgtacccgtatgcgcaa 20460973  T
Q  216 tactctcagcatcctttcttcccaccattctatca 250  Q
    |||||||||||||||||||| ||||||||||||||    
T  20460974 tactctcagcatcctttctttccaccattctatca 20461008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 10962362 - 10962570
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  |||||||| | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  10962362 attgtgtttgagaaagctgaatcctctgtgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 10962461  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  10962462 gagccggtcaatcaatggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 10962561  T
Q  242 attctatca 250  Q
     || |||||    
T  10962562 gttttatca 10962570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 51637910 - 51638118
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||||||| ||| || | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  51637910 attgtgtttgagaaagctgaatcttctgcaagtgcgtcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 51638009  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  51638010 gagccggtcaatcaatggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 51638109  T
Q  242 attctatca 250  Q
     || |||||    
T  51638110 gttttatca 51638118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 20340764 - 20340687
Alignment:
Q  173 catcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccattctatca 250  Q
    ||||||||||||||||||||||||| |||||  ||||  |||||||||||||||||| ||||| ||||||||||||||    
T  20340764 catcaatgctgctcagctacctccgtcgtacccgtacgcgcaatactctcagcatcccttctttccaccattctatca 20340687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 41793871 - 41793663
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||| ||||||  | |||||||| || |||||||||||| || || ||||||||||| || ||||| || |||||||  || |    
T  41793871 attgtgtttgagaaagctgaaacctctgtgagtgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtgggaatggtatcagctg 41793772  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || |||||||||||||||| ||||  || |||||||| || ||  | |||||| | |||   || ||||  || ||||| |||||||||||||| ||    
T  41793771 gagccggtcaatccatggctaccgttgctcctatcaatgcagcccaaatgcctccgtcatacccatatatgccgtattctcaacatcctttcttcccgcc 41793672  T
Q  242 attctatca 250  Q
    ||| |||||    
T  41793671 attttatca 41793663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 45 - 250
Target Start/End: Original strand, 28584676 - 28584881
Alignment:
Q  45 gtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccggaa 144  Q
    ||||||||||||| |||||||||||  ||||| || | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |||     
T  28584676 gtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggag 28584775  T
Q  145 ccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccatt 244  Q
    || | ||||| |||||||||||||  || |||||||| |||||  | |||||| | |||  ||| ||||  || ||||||||||| ||||||||||| ||    
T  28584776 ccgggcaatcaatggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccgtatatgccgtattctcagcatccgttcttcccaccgtt 28584875  T
Q  245 ctatca 250  Q
     |||||    
T  28584876 ttatca 28584881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 119; Significance: 7e-61; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 16 - 250
Target Start/End: Original strand, 18530025 - 18530259
Alignment:
Q  16 tagaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaaga 115  Q
    ||||||| ||||||||||| ||||||||||| || ||||||| ||||||||||| ||||||||||| ||  || ||||| ||||||||||||||||||||    
T  18530025 tagaagaagctgtcagagaaggcattattgtattcgagaaagttgaatcctctgtaaatgcatcaaagagatacggtaacggtcatcataagaagaaaga 18530124  T
Q  116 gactgaagtagggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaa 215  Q
     || |||||||||||||||| ||||||||| |||||||||||||||||||||  ||| || |||||||| ||| |||||||  |||||  |||   ||||    
T  18530125 aacagaagtagggatggtatctgccggaactagtcaatccatggctactgttacccctattaatgctgcccagttacctccatcgtacccgtatgcgcaa 18530224  T
Q  216 tactctcagcatcctttcttcccaccattctatca 250  Q
    |||||||||||||||||||| ||||||||||||||    
T  18530225 tactctcagcatcctttctttccaccattctatca 18530259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 16 - 250
Target Start/End: Complemental strand, 16627132 - 16626899
Alignment:
Q  16 tagaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaaga 115  Q
    ||||||| ||| ||||||| ||||||||||| || ||||||| ||||||||| ||||||||||||| || ||| ||||| ||||||||||||||| ||||    
T  16627132 tagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaag-aaga 16627034  T
Q  116 gactgaagtagggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaa 215  Q
     || |||||||||||||||| ||||||| || ||||||||||||||||||||| ||| || |||||||| ||| |||||||| |||||  |||    |||    
T  16627033 aacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagttacctccgtcgtacccgtatgcacaa 16626934  T
Q  216 tactctcagcatcctttcttcccaccattctatca 250  Q
    |||||||||||||| ||||| ||||| ||||||||    
T  16626933 tactctcagcatcccttctttccaccgttctatca 16626899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 250
Target Start/End: Complemental strand, 15893334 - 15893102
Alignment:
Q  18 gaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagaga 117  Q
    ||||| ||||||||||| || || |||||||| ||||||| |||||||||||  |||||||||| || |||| |||| || || || ||||||||||| |    
T  15893334 gaagaagctgtcagagaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatagtaacggacaccacaagaagaaagaaa 15893235  T
Q  118 ctgaagtagggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaata 217  Q
    | |||||||||||||| | ||||||| || |||||||||||||||||||||  || ||||||||||| ||  | |||||| |||||   ||   ||  ||    
T  15893234 cggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctatcaatgctgcccaaatgcctccgtcgtacccatatgcgccgta 15893135  T
Q  218 ctctcagcatcctttcttcccaccattctatca 250  Q
    |||||||||||||||||| || || ||||||||    
T  15893134 ctctcagcatcctttctttccgcccttctatca 15893102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 8295629 - 8295768
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  |||||||||| || |||||||||||| || || ||||||||||| || |||||||||||||| | |||||    
T  8295629 attgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtctgccg 8295728  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgc 181  Q
    || || |||||||||||||||||||||  || ||||||||    
T  8295729 gagccggtcaatccatggctactgttgctcctatcaatgc 8295768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 39 - 250
Target Start/End: Original strand, 7996213 - 7996424
Alignment:
Q  39 attattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatg 138  Q
    ||||||||||||||||||| |||||| ||||| | ||| || | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  |    
T  7996213 attattgtgtttgagaaagctgaatcttctgcgagtgcctcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcag 7996312  T
Q  139 ccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttccc 238  Q
    | ||| || ||||||| |||||||||||||  ||||||||||| |||||  | |||||||| |||   || ||||  || ||||||||||||||||||||    
T  7996313 ctggagccggtcaatcaatggctactgttgctcccatcaatgcagctcaaatgcctccgccatacccatatatgccgtattctcagcatcctttcttccc 7996412  T
Q  239 accattctatca 250  Q
     ||||| |||||    
T  7996413 gccattttatca 7996424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 39 - 250
Target Start/End: Original strand, 10642721 - 10642932
Alignment:
Q  39 attattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatg 138  Q
    ||||||||||||||||||| |||||| ||||| | ||| || | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  |    
T  10642721 attattgtgtttgagaaagctgaatcttctgcgagtgcctcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcag 10642820  T
Q  139 ccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttccc 238  Q
    | ||| || ||||||| |||||||||||||  ||||||||||| |||||  | |||||||| |||   || ||||  || ||||||||||||||||||||    
T  10642821 ctggagccggtcaatcaatggctactgttgctcccatcaatgcagctcaaatgcctccgccatacccatatatgccgtattctcagcatcctttcttccc 10642920  T
Q  239 accattctatca 250  Q
     ||||| |||||    
T  10642921 gccattttatca 10642932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 8301868 - 8301660
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  ||||| |||| || |||||||||||| || || ||||||||||| || |||||| ||||||| | |||||    
T  8301868 attgtgttcgagaaagctgaatcctctgtgaatgcgtcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtatggatggtgtctgccg 8301769  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||||||||||| |||||  || ||||||||||| ||  | |||||| |||||   ||   ||  || ||||||||||||||||| || ||    
T  8301768 gagccggtcaatccatggctattgttgctcctatcaatgctgcccaaatgcctccgtcgtactcatatgcgccgtattctcagcatcctttctttccgcc 8301669  T
Q  242 attctatca 250  Q
    |||||||||    
T  8301668 attctatca 8301660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 22871478 - 22871270
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||| | |||||| | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  22871478 attgtgtttgagaaagctgaatcctctgcgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 22871379  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  || |||||||| |||||| | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  22871378 gagccggtcaatctatggctactgttgcacctatcaatgcagctcagatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 22871279  T
Q  242 attctatca 250  Q
     || |||||    
T  22871278 gttttatca 22871270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 22886537 - 22886329
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||| | |||||| | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  22886537 attgtgtttgagaaagctgaatcctctgcgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 22886438  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  || |||||||| |||||| | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  22886437 gagccggtcaatctatggctactgttgcacctatcaatgcagctcagatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 22886338  T
Q  242 attctatca 250  Q
     || |||||    
T  22886337 gttttatca 22886329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 42 - 181
Target Start/End: Complemental strand, 4797257 - 4797118
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  |||||||||| || |||||||||||| || || ||||||||||| || |||||||||||||| |  || |    
T  4797257 attgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctg 4797158  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgc 181  Q
    || || |||||||||||||||||||||  || ||||||||    
T  4797157 gagccggtcaatccatggctactgttgctcctatcaatgc 4797118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 18050916 - 18051055
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  |||||||||| || |||||||||||| || || ||||||||||| || |||||||||||||| |  || |    
T  18050916 attgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctg 18051015  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgc 181  Q
    || || |||||||||||||||||||||  || ||||||||    
T  18051016 gagccggtcaatccatggctactgttgctcctatcaatgc 18051055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 42 - 244
Target Start/End: Original strand, 7072866 - 7073068
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  ||||| || | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  7072866 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 7072965  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || ||||||||||||||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||||||||| || ||    
T  7072966 gagccagtcaatccatggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatcctttctttccgcc 7073065  T
Q  242 att 244  Q
    |||    
T  7073066 att 7073068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 42 - 187
Target Start/End: Original strand, 4721285 - 4721430
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  |||||||| | || |||||||||||| || || ||||||||||| || |||||||||||||| |  || |    
T  4721285 attgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctg 4721384  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctca 187  Q
    || || |||||||||||||||||||||  || |||||||| |||||    
T  4721385 gagccggtcaatccatggctactgttgctcctatcaatgcagctca 4721430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 42 - 187
Target Start/End: Original strand, 35880420 - 35880565
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  |||||||| | || |||||||||||| || || ||||||||||| || |||||||||||||| |  || |    
T  35880420 attgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctg 35880519  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctca 187  Q
    || || |||||||||||||||||||||  || |||||||| |||||    
T  35880520 gagccggtcaatccatggctactgttgctcctatcaatgcagctca 35880565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 5466639 - 5466847
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | |  ||||||| || |||||||||||| || || ||||||||||| || ||||| |||||||| |  ||||    
T  5466639 attgtgtttgagaaagctgaatcttctacgagcgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagccg 5466738  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  5466739 gagccggtcaatctatggctactgttgcacctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 5466838  T
Q  242 attctatca 250  Q
    ||| |||||    
T  5466839 attttatca 5466847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 18330328 - 18330536
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||| | ||||||| |||||||||||  |||||||| | || |||||||||||| || || ||||||||||| || |||||||||||||| |  || |    
T  18330328 attgtgctcgagaaagctgaatcctctgtgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctg 18330427  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || |||||||||||||||||||||  || |||||||| |||||  | |||||| | |||   ||  |||  || ||||||||||||||||| |||||    
T  18330428 gagccggtcaatccatggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatgtgccgtattctcagcatcctttctttccacc 18330527  T
Q  242 attctatca 250  Q
    ||| |||||    
T  18330528 attttatca 18330536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 47023107 - 47023315
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    ||||||||||||||||  ||||||||||  |||||||| | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  47023107 attgtgtttgagaaagccgaatcctctgtgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 47023206  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  || ||||||||  ||||  | |||||| | |||   |||||||  || |||||||||||||||||||||||    
T  47023207 gagccggtcaatcaatggctactgttgctcctatcaatgcaactcaaatgcctccgtcatacccatacatgccgtattctcagcatcctttcttcccacc 47023306  T
Q  242 attctatca 250  Q
     || |||||    
T  47023307 gttttatca 47023315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 42 - 181
Target Start/End: Complemental strand, 15741686 - 15741547
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  |||||||||| || |||||| ||||| || || ||||||||||| || |||||||||||||| |  || |    
T  15741686 attgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatggcaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctg 15741587  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgc 181  Q
    || || |||||||||||||||||||||  || ||||||||    
T  15741586 gagccggtcaatccatggctactgttgctcctatcaatgc 15741547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 39 - 250
Target Start/End: Complemental strand, 28116564 - 28116353
Alignment:
Q  39 attattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatg 138  Q
    ||||||||||||||||||| |||||| ||| | | |||||| | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  |    
T  28116564 attattgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcag 28116465  T
Q  139 ccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttccc 238  Q
    | ||| || |||||||||||||||| ||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||||||||||||    
T  28116464 ctggagccggtcaatccatggctaccgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatcctttcttccc 28116365  T
Q  239 accattctatca 250  Q
     ||||| |||||    
T  28116364 gccattttatca 28116353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 45 - 250
Target Start/End: Complemental strand, 5596967 - 5596762
Alignment:
Q  45 gtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccggaa 144  Q
    ||||||||||||| |||||||||||| | |||||| | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  || |||     
T  5596967 gtgtttgagaaagttgaatcctctgcgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggag 5596868  T
Q  145 ccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccatt 244  Q
    || ||||||| |||||||| ||||  || |||||||| |||||  | |||||| |||||   || ||||  || ||||||||||| ||||||||||| ||    
T  5596867 ccggtcaatcaatggctaccgttgctcctatcaatgcagctcaaatgcctccgtcgtacccatatatgccgtattctcagcatccattcttcccaccgtt 5596768  T
Q  245 ctatca 250  Q
     |||||    
T  5596767 ttatca 5596762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 42 - 187
Target Start/End: Original strand, 8211395 - 8211540
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| ||| |||||||| | |||||| | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  8211395 attgtgtttgagaaagctgagtcctctgcgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 8211494  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctca 187  Q
    || || |||||||||||||||||||||  || |||||||| |||||    
T  8211495 gagccggtcaatccatggctactgttgctcctatcaatgcagctca 8211540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 45 - 250
Target Start/End: Complemental strand, 36997690 - 36997485
Alignment:
Q  45 gtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccggaa 144  Q
    ||||||||||||| ||||||||||| |||||| || | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |||     
T  36997690 gtgtttgagaaagctgaatcctctgtaaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggag 36997591  T
Q  145 ccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccatt 244  Q
    || ||||||| |||||||| ||||  || |||||||| |||||  | |||||| | |||   |||||||  || ||||||||||||||||||||||| ||    
T  36997590 ccggtcaatcaatggctaccgttgctcctatcaatgcagctcaaatgcctccgtcatacccatacatgccgtattctcagcatcctttcttcccaccgtt 36997491  T
Q  245 ctatca 250  Q
     |||||    
T  36997490 ttatca 36997485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 187
Target Start/End: Original strand, 10395787 - 10395935
Alignment:
Q  39 attattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatg 138  Q
    ||||||||||||||||||| |||||||||||  |||||||| | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  |    
T  10395787 attattgtgtttgagaaagctgaatcctctgtgaatgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcag 10395886  T
Q  139 ccggaaccagtcaatccatggctactgttgtccccatcaatgctgctca 187  Q
    | ||| || |||||||||||||||| ||||  || |||||||| |||||    
T  10395887 ctggagccggtcaatccatggctaccgttgctcctatcaatgcagctca 10395935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 17985560 - 17985352
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | ||||||||  | ||| |||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  17985560 attgtgtttgagaaagctgaatcttctacgagtgcatcaaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 17985461  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || |||||||||||||||| ||||  ||||||||||| |||||  | |||||| | |||   || |||| ||| ||||||||||| |||||||||||    
T  17985460 gagccggtcaatccatggctaccgttgctcccatcaatgcagctcaaatgcctccgtcatacccatatatgccatattctcagcatccgttcttcccacc 17985361  T
Q  242 attctatca 250  Q
     || |||||    
T  17985360 gttttatca 17985352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 29149359 - 29149151
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  |||||||| | || |||||||||||| || || ||||||||||| || |||||||||||||| |  || |    
T  29149359 attgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctg 29149260  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||||||||||||| |||  || |||||||| || ||  | |||||| | |||   ||  |||  || |||||||||||||||||||||||    
T  29149259 gagccggtcaatccatggctactattgctcctatcaatgcagcccaaatgcctccgtcatacccatatgtgccgtattctcagcatcctttcttcccacc 29149160  T
Q  242 attctatca 250  Q
     || |||||    
T  29149159 gttttatca 29149151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 45 - 241
Target Start/End: Original strand, 51781668 - 51781864
Alignment:
Q  45 gtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccggaa 144  Q
    ||||||||||||| ||||||||||| |||||| || | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |||     
T  51781668 gtgtttgagaaagctgaatcctctgtaaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggag 51781767  T
Q  145 ccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || ||||||| |||||||| ||||  || |||||||| |||||  | |||||| | |||   |||||||  |||||||||||||| |||||||||||    
T  51781768 ccggtcaatcaatggctaccgttgctcctatcaatgcagctcaaatgcctccgtcatacccatacatgccgtactctcagcatccgttcttcccacc 51781864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 27 - 250
Target Start/End: Complemental strand, 6543093 - 6542870
Alignment:
Q  27 gtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtag 126  Q
    |||||||| || || |||||||||||||||| |||||| ||| | | |||||| | || |||||||||||| || || ||||||||||| || ||||| |    
T  6543093 gtcagagatgggatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtgg 6542994  T
Q  127 ggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagca 226  Q
    ||||||| |  || ||| || ||||||| |||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||    
T  6542993 ggatggtgtcagctggagccggtcaatcaatggctactgttgcacctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagca 6542894  T
Q  227 tcctttcttcccaccattctatca 250  Q
    ||| ||||||||||| || |||||    
T  6542893 tccgttcttcccaccgttttatca 6542870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 42 - 241
Target Start/End: Complemental strand, 20577466 - 20577267
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  ||||| || | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  20577466 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 20577367  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  || ||||||||  ||||  | |||||| | |||   |||||||  || |||||||||||||||||||||||    
T  20577366 gagccggtcaatcaatggctactgttgctcctatcaatgcaactcaaatgcctccgtcatacccatacatgccgtattctcagcatcctttcttcccacc 20577267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 187
Target Start/End: Original strand, 6191970 - 6192115
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  |||||||| | || |||||||||||| || || ||||||||||| || |||||| ||||||| |  |  |    
T  6191970 attgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtatggatggtgtcagttg 6192069  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctca 187  Q
    || || |||||||||||||||||||||  || |||||||| |||||    
T  6192070 gagccggtcaatccatggctactgttgctcctatcaatgcagctca 6192115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 5013366 - 5013574
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||||| |  | ||| |||||||| || || ||||||||||| || ||||| ||||||||||  || |    
T  5013366 attgtgtttgagaaagctgaatcttctacgagtgcatcgaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctg 5013465  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  ||||||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  5013466 gagccggtcaatcaatggctactgttgctcccatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 5013565  T
Q  242 attctatca 250  Q
     || |||||    
T  5013566 gttttatca 5013574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 11110965 - 11110757
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  ||||| || | ||  ||||||||||| || || |||||||| || || ||||| |||||||| |  || |    
T  11110965 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaggaaacggaagtggggatggtgtcagctg 11110866  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || |||||||||||||||| ||||  || ||||||||  ||||  | |||||| | |||   |||||||  || |||||||||||||||||||||||    
T  11110865 gagccggtcaatccatggctaccgttgctcctatcaatgcaactcaaatgcctccgtcatacccatacatgccgtattctcagcatcctttcttcccacc 11110766  T
Q  242 attctatca 250  Q
     || |||||    
T  11110765 gttttatca 11110757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 18224845 - 18225053
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||||| |  | ||| |||||||| || || ||||||||||| || ||||| ||||||||||  || |    
T  18224845 attgtgtttgagaaagctgaatcttctacgagtgcatcgaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctg 18224944  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  || |||||||| |||||  | |||||| | |||   || |||| ||| ||||||||||| |||||||||||    
T  18224945 gagccggtcaatcaatggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccatattctcagcatccgttcttcccacc 18225044  T
Q  242 attctatca 250  Q
     || |||||    
T  18225045 gttttatca 18225053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 18242381 - 18242589
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  ||||| || | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  ||||    
T  18242381 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagccg 18242480  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||| ||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  18242481 gagccggtcaatcaatggctaccgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 18242580  T
Q  242 attctatca 250  Q
     || |||||    
T  18242581 gttttatca 18242589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 168
Target Start/End: Complemental strand, 4347288 - 4347162
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||||| | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  4347288 attgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 4347189  T
Q  142 gaaccagtcaatccatggctactgttg 168  Q
    || || |||||||||||||||||||||    
T  4347188 gagccggtcaatccatggctactgttg 4347162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 5652175 - 5652252
Alignment:
Q  173 catcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccattctatca 250  Q
    ||||||||||||||||||||||||| |||||  |||   |||||||||||||||||| ||||| ||||||||||||||    
T  5652175 catcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatca 5652252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 5713012 - 5713089
Alignment:
Q  173 catcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccattctatca 250  Q
    ||||||||||||||||||||||||| |||||  |||   |||||||||||||||||| ||||| ||||||||||||||    
T  5713012 catcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatca 5713089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 5723922 - 5723999
Alignment:
Q  173 catcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccattctatca 250  Q
    ||||||||||||||||||||||||| |||||  |||   |||||||||||||||||| ||||| ||||||||||||||    
T  5723922 catcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatca 5723999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 5757555 - 5757478
Alignment:
Q  173 catcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccattctatca 250  Q
    ||||||||||||||||||||||||| |||||  |||   |||||||||||||||||| ||||| ||||||||||||||    
T  5757555 catcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatca 5757478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 5768446 - 5768369
Alignment:
Q  173 catcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccattctatca 250  Q
    ||||||||||||||||||||||||| |||||  |||   |||||||||||||||||| ||||| ||||||||||||||    
T  5768446 catcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatca 5768369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 17994254 - 17994177
Alignment:
Q  173 catcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccattctatca 250  Q
    ||||||||||||||||||||||||| |||||  |||   |||||||||||||||||| ||||| ||||||||||||||    
T  17994254 catcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatca 17994177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 45 - 241
Target Start/End: Original strand, 51796756 - 51796953
Alignment:
Q  45 gtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatgg-tcatcataagaagaaagagactgaagtagggatggtatatgccgga 143  Q
    ||||||||||||| ||||||||||| |||||| || | ||  |||||||||||  || || ||||||||||| || ||||| |||||||| |  || |||    
T  51796756 gtgtttgagaaagctgaatcctctgtaaatgcgtcgaagagatatggtaatggcacaccacaagaagaaagaaacggaagtggggatggtgtcagctgga 51796855  T
Q  144 accagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
     || ||||||| |||||||| ||||  || |||||||| |||||  | |||||| | |||   |||||||  |||||||||||||| |||||||||||    
T  51796856 gccggtcaatcaatggctaccgttgctcctatcaatgcagctcaaatgcctccgtcatacccatacatgccgtactctcagcatccgttcttcccacc 51796953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 18277656 - 18277448
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  |||||||| | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  18277656 attgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 18277557  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| ||||| |||||||  || ||||||||  ||||  | |||||| | |||   ||  |||  |||||||||||||| |||||||||||    
T  18277556 gagccggtcaatcaatggccactgttgctcctatcaatgcaactcaaatgcctccgtcatacccatatgtgccgtactctcagcatccgttcttcccacc 18277457  T
Q  242 attctatca 250  Q
     || |||||    
T  18277456 gttttatca 18277448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 18292957 - 18292749
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  |||||||| | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  18292957 attgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 18292858  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| ||||| |||||||  || ||||||||  ||||  | |||||| | |||   ||  |||  |||||||||||||| |||||||||||    
T  18292857 gagccggtcaatcaatggccactgttgctcctatcaatgcaactcaaatgcctccgtcatacccatatgtgccgtactctcagcatccgttcttcccacc 18292758  T
Q  242 attctatca 250  Q
     || |||||    
T  18292757 gttttatca 18292749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 18308258 - 18308050
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  |||||||| | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  18308258 attgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 18308159  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| ||||| |||||||  || ||||||||  ||||  | |||||| | |||   ||  |||  |||||||||||||| |||||||||||    
T  18308158 gagccggtcaatcaatggccactgttgctcctatcaatgcaactcaaatgcctccgtcatacccatatgtgccgtactctcagcatccgttcttcccacc 18308059  T
Q  242 attctatca 250  Q
     || |||||    
T  18308058 gttttatca 18308050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 250
Target Start/End: Original strand, 28338953 - 28339164
Alignment:
Q  39 attattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatg 138  Q
    ||||||||||||||||||| |||||| ||| | |  ||||| | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  |    
T  28338953 attattgtgtttgagaaagctgaatcttctacgagcgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcag 28339052  T
Q  139 ccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttccc 238  Q
    | ||| || |||||||||||||||| || |  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| ||||||||    
T  28339053 cgggagccggtcaatccatggctaccgtcgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttccc 28339152  T
Q  239 accattctatca 250  Q
    ||| || |||||    
T  28339153 accgttttatca 28339164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 4625732 - 4625809
Alignment:
Q  173 catcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccattctatca 250  Q
    ||||||||||||||||||||||||| |||||  |||   |||||||||||||||||| ||||| |||||||| |||||    
T  4625732 catcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattatatca 4625809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 163
Target Start/End: Original strand, 21674347 - 21674468
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  |||||||| | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  21674347 attgtgtttgagaaagctgaatcctctgtgaatgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 21674446  T
Q  142 gaaccagtcaatccatggctac 163  Q
    || || ||||| ||||||||||    
T  21674447 gagccggtcaacccatggctac 21674468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 45 - 250
Target Start/End: Original strand, 24327816 - 24328021
Alignment:
Q  45 gtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccggaa 144  Q
    ||||||||||||| |||||||||||  ||||| || | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |||     
T  24327816 gtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggag 24327915  T
Q  145 ccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccatt 244  Q
    || | ||||| |||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| ||||||||||| ||    
T  24327916 ccgggcaatcaatggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccaccgtt 24328015  T
Q  245 ctatca 250  Q
     |||||    
T  24328016 ttatca 24328021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 29665589 - 29665381
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||  |||||| ||| | | |||| | | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  29665589 attgtgtttgagaaaactgaatcttctacgagtgcaccgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 29665490  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||| ||||  || |||||||| |||||  | |||||| | |||   |||||||  |||||||||||||| |||||||||||    
T  29665489 gagccggtcaatcaatggctaccgttgctcctatcaatgcagctcaaatgcctccgtcatacccatacatgccgtactctcagcatccgttcttcccacc 29665390  T
Q  242 attctatca 250  Q
     || |||||    
T  29665389 gttttatca 29665381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 31965077 - 31964869
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | |  ||||| | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  31965077 attgtgtttgagaaagctgaatcttctacgagcgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgg 31964978  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || |||||||||||||||| || |  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  31964977 gagccggtcaatccatggctaccgtcgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 31964878  T
Q  242 attctatca 250  Q
     || |||||    
T  31964877 gttttatca 31964869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 50134675 - 50134467
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | |  ||||| | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  50134675 attgtgtttgagaaagctgaatcttctacgagcgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgg 50134576  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || |||||||||||||||| || |  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  50134575 gagccggtcaatccatggctaccgtcgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 50134476  T
Q  242 attctatca 250  Q
     || |||||    
T  50134475 gttttatca 50134467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 241
Target Start/End: Original strand, 48465569 - 48465768
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  ||||| || | ||  ||||||||||| || || ||||||||||| || ||||| || ||||| |  || |    
T  48465569 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctg 48465668  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| || ||||| ||||  || |||||||| |||||  | |||||| | |||   || ||||  |||||||||||||| |||||||||||    
T  48465669 gagccggtcaatcaatagctaccgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtactctcagcatccgttcttcccacc 48465768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 168
Target Start/End: Original strand, 28020932 - 28021058
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||||||| || ||||||||| || || || |||||||| || || ||||| |||||||| |  || |    
T  28020932 attgtgtttgagaaagctgaatcttctacgagtgcatcaaagaggtatggtaacggacaccacaagaagaaggaaacggaagtggggatggtgtcagctg 28021031  T
Q  142 gaaccagtcaatccatggctactgttg 168  Q
    || || | |||||||||||||||||||    
T  28021032 gagccgggcaatccatggctactgttg 28021058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 255
Target Start/End: Original strand, 4416570 - 4416783
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | |  ||||| | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  4416570 attgtgtttgagaaagctgaatcttctacgagcgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 4416669  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| ||| |||||||||  || ||||||||  ||||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  4416670 gagccggtcaatcaatgactactgttgctcctatcaatgcaactcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 4416769  T
Q  242 attctatcaccagc 255  Q
     || ||||| ||||    
T  4416770 gttttatcatcagc 4416783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 163
Target Start/End: Complemental strand, 5609926 - 5609805
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | ||| |||| ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  5609926 attgtgtttgagaaagctgaatcttctacgagtgcgtcaaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgg 5609827  T
Q  142 gaaccagtcaatccatggctac 163  Q
    || || ||||||||||||||||    
T  5609826 gagccggtcaatccatggctac 5609805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 20065744 - 20065839
Alignment:
Q  86 gtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgc 181  Q
    |||||||||||| ||||| ||||||||||| || ||||| |||||||| |  || ||| || ||||||||||||| |||||||  || ||||||||    
T  20065744 gtatggtaatggacatcacaagaagaaagatacggaagtggggatggtgtcagctggagccggtcaatccatggccactgttgctcctatcaatgc 20065839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 16 - 250
Target Start/End: Original strand, 20079 - 20313
Alignment:
Q  16 tagaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaaga 115  Q
    ||||||| ||||||||||| |||||||||||||| ||||||| ||||||||| ||||||||||||| || ||| ||||| ||||||||||||||||||||    
T  20079 tagaagaagctgtcagagaaggcattattgtgttcgagaaagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaaga 20178  T
Q  116 gactgaagtagggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaa 215  Q
     || |||||||||||||||| ||||||| || ||||||||||||||||||||| ||| || |||||||| ||| |||||||| |||||   ||   || |    
T  20179 aacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagttacctccgtcgtacccatatgcgcca 20278  T
Q  216 tactctcagcatcctttcttcccaccattctatca 250  Q
    |||||||||||||| ||||| ||| ||||||||||    
T  20279 tactctcagcatcccttctttccatcattctatca 20313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 30146 - 30285
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| |||||||  ||||||||||  |||||||| |||| |||||||||||| || || ||||||||||| || ||| |||||||||| |  || |    
T  30146 attgtgttcgagaaagccgaatcctctgtgaatgcatcgaggaggtatggtaatggacaccacaagaagaaagaaacggaaatagggatggtgtcagctg 30245  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgc 181  Q
    || || |||||||||||||||||||||  || ||||||||    
T  30246 gagccggtcaatccatggctactgttgctcctatcaatgc 30285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 115; Significance: 2e-58; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 16 - 250
Target Start/End: Original strand, 16040994 - 16041228
Alignment:
Q  16 tagaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaaga 115  Q
    ||||||| ||||||||||| ||||||||||| || ||||||| ||||||||| | ||||||||||| || ||||||||| ||||||||||||||||||||    
T  16040994 tagaagaagctgtcagagaaggcattattgtattcgagaaagttgaatcctccgtaaatgcatcaaagaggtatggtaacggtcatcataagaagaaaga 16041093  T
Q  116 gactgaagtagggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaa 215  Q
     || |||||||||||||||| ||||||| || ||||||||||||||||||||| ||| || |||||||| ||| |||||||| |||||   ||   || |    
T  16041094 aacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagttacctccgtcgtacccatatgcgcca 16041193  T
Q  216 tactctcagcatcctttcttcccaccattctatca 250  Q
    |||||||||||||| ||||| ||||||||||||||    
T  16041194 tactctcagcatcccttctttccaccattctatca 16041228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 16 - 250
Target Start/End: Complemental strand, 16450470 - 16450236
Alignment:
Q  16 tagaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaaga 115  Q
    ||||||| ||||||||||| ||||||||||| || ||||||| ||||||||||| |||||||||||  |  || ||||| ||||||||||||||||||||    
T  16450470 tagaagaagctgtcagagaaggcattattgtattcgagaaagttgaatcctctgtaaatgcatcaaaaagatacggtaacggtcatcataagaagaaaga 16450371  T
Q  116 gactgaagtagggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaa 215  Q
     ||  ||||||||||||||| ||||||| || |||||||||| |||||||||| ||| || |||||||| ||| |||||||| |||||  ||||  |||     
T  16450370 aacaaaagtagggatggtatctgccggagccggtcaatccatagctactgttgcccctattaatgctgcccagttacctccgtcgtacccgtacgcgcag 16450271  T
Q  216 tactctcagcatcctttcttcccaccattctatca 250  Q
    |||||||||||||| ||||| |||||||| |||||    
T  16450270 tactctcagcatcccttctttccaccattttatca 16450236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 18 - 250
Target Start/End: Complemental strand, 16518889 - 16518657
Alignment:
Q  18 gaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagaga 117  Q
    ||||| || |||||||| || || |||||||| || |||| ||||||||||| ||||||||||| || ||||||||| || || || ||||||||||| |    
T  16518889 gaagaagccgtcagagaaggaatcattgtgttcgaaaaagctgaatcctctgtaaatgcatcaaagaggtatggtaacggacaccacaagaagaaagaaa 16518790  T
Q  118 ctgaagtagggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaata 217  Q
    | |||||||||||||| | ||||||| || |||||||||||||||||||||  || || |||||||| ||  | |||||| | |||   ||   ||  ||    
T  16518789 cggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctattaatgctgcccaaatgcctccgtcatacccatatgcgccgta 16518690  T
Q  218 ctctcagcatcctttcttcccaccattctatca 250  Q
    |||||||||||||||||| || |||||||||||    
T  16518689 ctctcagcatcctttctttccgccattctatca 16518657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 39 - 250
Target Start/End: Original strand, 45387034 - 45387245
Alignment:
Q  39 attattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatg 138  Q
    ||||||||||||||||||| |||||| ||||||| ||| || | || |||||||||||| || || ||||||||||| |||||||| ||||||||||  |    
T  45387034 attattgtgtttgagaaagctgaatcttctgcaagtgcgtcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcag 45387133  T
Q  139 ccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttccc 238  Q
    | ||| || ||||||| |||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||||||||||||    
T  45387134 ctggagccggtcaatcaatggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatcctttcttccc 45387233  T
Q  239 accattctatca 250  Q
     ||||| |||||    
T  45387234 gccattttatca 45387245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 250
Target Start/End: Complemental strand, 16503853 - 16503621
Alignment:
Q  18 gaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagaga 117  Q
    ||||| || |||||||| || || |||||||| || |||| |||||||||||  |||||||||| || ||||||||| || || || ||||||||||| |    
T  16503853 gaagaagccgtcagagaaggaatcattgtgttcgaaaaagctgaatcctctgtgaatgcatcaaagaggtatggtaacggacaccacaagaagaaagaaa 16503754  T
Q  118 ctgaagtagggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaata 217  Q
    | |||||||||||||| | ||||||| || |||||||||||||||||||||  || || |||||||| ||  | |||||| | |||   ||   ||  ||    
T  16503753 cggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctattaatgctgcccaaatgcctccgtcatacccatatgcgccgta 16503654  T
Q  218 ctctcagcatcctttcttcccaccattctatca 250  Q
    |||||||||||||||||| || |||||||||||    
T  16503653 ctctcagcatcctttctttccgccattctatca 16503621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 42 - 181
Target Start/End: Complemental strand, 10917314 - 10917175
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  |||||||||| || |||||||||||| || || ||||||||||| || |||||||||||||| |  || |    
T  10917314 attgtgtttgagaaagctgaatcctctgtgaatgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctg 10917215  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgc 181  Q
    || || |||||||||||||||||||||  || ||||||||    
T  10917214 gagccggtcaatccatggctactgttgctcctatcaatgc 10917175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 2154267 - 2154406
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  |||||||||| || |||||||||||| || || ||||||||||| || |||||||||||||| |  || |    
T  2154267 attgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctg 2154366  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgc 181  Q
    || || |||||||||||||||||||||  || ||||||||    
T  2154367 gagccggtcaatccatggctactgttgctcctatcaatgc 2154406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 2 - 250
Target Start/End: Original strand, 9618305 - 9618553
Alignment:
Q  2 catgggaacccacttagaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcat 101  Q
    ||||||||||| | | || || || ||||| || || || |||||||||||||||| |||||||||||  | |||||| | ||  ||||||||||| ||     
T  9618305 catgggaacccgcctcgaggaagccgtcagggatgggatcattgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacac 9618404  T
Q  102 cataagaagaaagagactgaagtagggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgt 201  Q
    || ||||||||||| |||||||| ||||||||||  || ||| || ||||||| |||||||||||||  || |||||||| |||||  | |||||| | |    
T  9618405 cacaagaagaaagaaactgaagtggggatggtatcagctggagccggtcaatcaatggctactgttgctcctatcaatgcagctcaaatgcctccgtcat 9618504  T
Q  202 acgagtacatgcaatactctcagcatcctttcttcccaccattctatca 250  Q
    ||   || ||||  || ||||||||||| ||||||||||| || |||||    
T  9618505 acccatatatgccgtattctcagcatccgttcttcccaccgttttatca 9618553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 31124605 - 31124813
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||| |||||||| | ||  ||||||||||| || || ||||||||||| || |||||||||||||| |  || |    
T  31124605 attgtgtttgagaaagctgaatcctctgcgaatgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctg 31124704  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||| ||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  31124705 gagccggtcaatcaatggctaccgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 31124804  T
Q  242 attctatca 250  Q
     || |||||    
T  31124805 gttttatca 31124813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 42 - 241
Target Start/End: Original strand, 3444988 - 3445187
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||||| | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  3444988 attgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 3445087  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  || |||||||| |||||  | |||||| | |||   |||||||  |||||||||||||| |||||||||||    
T  3445088 gagccggtcaatcaatggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatacatgccgtactctcagcatccgttcttcccacc 3445187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 42 - 168
Target Start/End: Complemental strand, 11425225 - 11425099
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  |||||||| | || |||||||||||| || || ||||||||||| || |||||||||||||| |  || |    
T  11425225 attgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctg 11425126  T
Q  142 gaaccagtcaatccatggctactgttg 168  Q
    || || |||||||||||||||||||||    
T  11425125 gagccggtcaatccatggctactgttg 11425099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 42 - 187
Target Start/End: Original strand, 5127686 - 5127831
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| ||| |||||||  |||||||| | || |||||||||||| || || ||||||||||| || |||||||||||||| |  || |    
T  5127686 attgtgttcgagaaagctgagtcctctgtgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctg 5127785  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctca 187  Q
    || || |||||||||||||||||||||  || |||||||| |||||    
T  5127786 gagccggtcaatccatggctactgttgctcctatcaatgcagctca 5127831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 45 - 250
Target Start/End: Original strand, 11441257 - 11441462
Alignment:
Q  45 gtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccggaa 144  Q
    ||||||||||||| ||||||||||| |||||| || | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |||     
T  11441257 gtgtttgagaaagctgaatcctctgtaaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggag 11441356  T
Q  145 ccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccatt 244  Q
    || ||||||| |||||||| ||||  || |||||||| |||||  | |||||| | |||   |||||||  || ||||||||||||||||||||||| ||    
T  11441357 ccggtcaatcaatggctaccgttgctcctatcaatgcagctcaaatgcctccgtcatacccatacatgccgtattctcagcatcctttcttcccaccgtt 11441456  T
Q  245 ctatca 250  Q
     |||||    
T  11441457 ttatca 11441462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 4145572 - 4145364
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | |  ||||| | || |||||||||||| || || ||||||||||| |||||||| ||||||||||  || |    
T  4145572 attgtgtttgagaaagctgaatcttctacgagcgcatcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctg 4145473  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  4145472 gagccggtcaatcaatggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 4145373  T
Q  242 attctatca 250  Q
     || |||||    
T  4145372 gttttatca 4145364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 5147789 - 5147581
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||||| |||||||| | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  5147789 attgtgtttgagaaagctgaatcttctgcgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 5147690  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||||||||||||  |||  || |||||||| |||||  | |||||| | ||    || ||||  |||||||||||||| |||||||||||    
T  5147689 gagccggtcaatccatggctaccattgctcctatcaatgcagctcaaatgcctccgtcatatccatatatgccgtactctcagcatccgttcttcccacc 5147590  T
Q  242 attctatca 250  Q
     || |||||    
T  5147589 gttttatca 5147581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 24592990 - 24592782
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| ||||||||||| |||||| || | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  24592990 attgtgtttgagaaagctgaatcctctgtaaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 24592891  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  24592890 gagccggtcaatcaatggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 24592791  T
Q  242 attctatca 250  Q
     || |||||    
T  24592790 gttttatca 24592782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 187
Target Start/End: Complemental strand, 16736909 - 16736764
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||||| | ||| || | ||  ||||||||||| || || ||||||||||| |||||||| ||||||||||  || |    
T  16736909 attgtgtttgagaaagctgaatcttctgcgagtgcgtcgaagagatatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctg 16736810  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctca 187  Q
    || || |||||||||||||||| ||||  || |||||||| |||||    
T  16736809 gagccggtcaatccatggctaccgttgctcctatcaatgcagctca 16736764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 187
Target Start/End: Complemental strand, 16751963 - 16751818
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||||| | ||| || | ||  ||||||||||| || || ||||||||||| |||||||| ||||||||||  || |    
T  16751963 attgtgtttgagaaagctgaatcttctgcgagtgcgtcgaagagatatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctg 16751864  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctca 187  Q
    || || |||||||||||||||| ||||  || |||||||| |||||    
T  16751863 gagccggtcaatccatggctaccgttgctcctatcaatgcagctca 16751818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 187
Target Start/End: Original strand, 17523226 - 17523371
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||||| | ||| || | ||  ||||||||||| || || ||||||||||| |||||||| ||||||||||  || |    
T  17523226 attgtgtttgagaaagctgaatcttctgcgagtgcgtcgaagagatatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctg 17523325  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctca 187  Q
    || || |||||||||||||||| ||||  || |||||||| |||||    
T  17523326 gagccggtcaatccatggctaccgttgctcctatcaatgcagctca 17523371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 187
Target Start/End: Complemental strand, 17529989 - 17529844
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||||| | ||| || | ||  ||||||||||| || || ||||||||||| |||||||| ||||||||||  || |    
T  17529989 attgtgtttgagaaagctgaatcttctgcgagtgcgtcgaagagatatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctg 17529890  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctca 187  Q
    || || |||||||||||||||| ||||  || |||||||| |||||    
T  17529889 gagccggtcaatccatggctaccgttgctcctatcaatgcagctca 17529844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 31088779 - 31088702
Alignment:
Q  173 catcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccattctatca 250  Q
    ||||||||||||||||||||||||| |||||  |||   |||||||||||||||||| ||||| ||||||||||||||    
T  31088779 catcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatca 31088702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 45733288 - 45733365
Alignment:
Q  173 catcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccattctatca 250  Q
    ||||||||||||||||||||||||| |||||  |||   |||||||||||||||||| ||||| ||||||||||||||    
T  45733288 catcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatca 45733365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 26275543 - 26275335
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||||| | || ||| |||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  26275543 attgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 26275444  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  26275443 gagccggtcaatcaatggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 26275344  T
Q  242 attctatca 250  Q
     || |||||    
T  26275343 gttttatca 26275335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 241
Target Start/End: Complemental strand, 26486193 - 26485994
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||||| | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  26486193 attgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 26486094  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| || ||||| ||||  || |||||||| |||||  | |||||| | |||   || ||||  |||||||||||||| |||||||||||    
T  26486093 gagccggtcaatcaatagctaccgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtactctcagcatccgttcttcccacc 26485994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 26320318 - 26320110
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | | |||| | || ||| |||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  26320318 attgtgtttgagaaagctgaatcttctacgagtacatcgaagaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 26320219  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  26320218 gagccggtcaatcaatggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 26320119  T
Q  242 attctatca 250  Q
     || |||||    
T  26320118 gttttatca 26320110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 26670363 - 26670155
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  | |||||| | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  26670363 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 26670264  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| || ||||| ||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  26670263 gagccggtcaatcaatagctaccgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 26670164  T
Q  242 attctatca 250  Q
     || |||||    
T  26670163 gttttatca 26670155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 241
Target Start/End: Complemental strand, 26538322 - 26538123
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  ||||| || | ||  ||||||||||| || || ||||||||||| || ||||| || ||||| |  || |    
T  26538322 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctg 26538223  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| || ||||| ||||  || |||||||| |||||  | |||||| | |||   || ||||  |||||||||||||| |||||||||||    
T  26538222 gagccggtcaatcaatagctaccgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtactctcagcatccgttcttcccacc 26538123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 187
Target Start/End: Complemental strand, 31564848 - 31564703
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||||| | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  31564848 attgtgtttgagaaagctgaatcttctacgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 31564749  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctca 187  Q
    || || ||||||| |||||||| ||||  || |||||||| |||||    
T  31564748 gagccggtcaatctatggctaccgttgctcctatcaatgcagctca 31564703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 26434951 - 26435159
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||| | | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  26434951 attgtgtttgagaaagctgaatcttctacgagtgcaccgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcag 26435050  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || |||| |||||||| |||||||  || |||| ||| |||||  | |||||| | |||   || ||||  |||||||||||||| |||||||||||    
T  26435051 gagccggtcagtccatggccactgttgctcctatcagtgcagctcaaatgcctccgtcatacccatatatgccgtactctcagcatccgttcttcccacc 26435150  T
Q  242 attctatca 250  Q
     || |||||    
T  26435151 gttttatca 26435159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 3e-38; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 250
Target Start/End: Original strand, 23891884 - 23892116
Alignment:
Q  18 gaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagaga 117  Q
    ||||| ||||||||||| || |||||||| || ||||||| ||||||||| |  |||||||||| || ||||||||| || ||||||||||||||||| |    
T  23891884 gaagaagctgtcagagaaggaattattgtattcgagaaagttgaatcctccgtgaatgcatcaaagaggtatggtaacggacatcataagaagaaagaaa 23891983  T
Q  118 ctgaagtagggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaata 217  Q
    | |||||||||||||||| ||||||| ||  ||||||||||||||||||||  || || |||||||| ||  | |||||| |||||   ||   ||  ||    
T  23891984 cagaagtagggatggtatctgccggagccgatcaatccatggctactgttgctcctattaatgctgcccaaatgcctccgtcgtacccatatgcgccgta 23892083  T
Q  218 ctctcagcatcctttcttcccaccattctatca 250  Q
    |||||||||||||||||| ||| ||||||||||    
T  23892084 ctctcagcatcctttctttccaacattctatca 23892116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 250
Target Start/End: Original strand, 25198710 - 25198942
Alignment:
Q  18 gaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagaga 117  Q
    ||||| ||||||||||| || |||||||| || ||||||| ||||||||| |  |||||||||| || ||| ||||| || |||||||||||||| || |    
T  25198710 gaagaagctgtcagagaaggaattattgtattcgagaaagttgaatcctccgtgaatgcatcaaagaggtacggtaacggacatcataagaagaaggaaa 25198809  T
Q  118 ctgaagtagggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaata 217  Q
    | ||||||||||||||||  |||||| || |||||||||||||||||||||  || || |||||| | ||  | |||||| |||||   ||   ||  ||    
T  25198810 cagaagtagggatggtatccgccggagccggtcaatccatggctactgttgctcctattaatgcttcccaattgcctccgtcgtacccatatgcgccgta 25198909  T
Q  218 ctctcagcatcctttcttcccaccattctatca 250  Q
    |||||||||||||||||| ||||||||||||||    
T  25198910 ctctcagcatcctttctttccaccattctatca 25198942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 18 - 181
Target Start/End: Complemental strand, 24688641 - 24688478
Alignment:
Q  18 gaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagaga 117  Q
    ||||| || |||||||| || || |||||||| ||||||| |||||||||||  |||||||||| || |||||||||||| || || ||||||||||| |    
T  24688641 gaagaagccgtcagagaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatggtaatggacaccacaagaagaaagaaa 24688542  T
Q  118 ctgaagtagggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgc 181  Q
    | |||||||||||||| | ||||||| || |||||||||||||||||||||  || ||||||||    
T  24688541 cggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctatcaatgc 24688478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 184
Target Start/End: Original strand, 24951788 - 24951954
Alignment:
Q  18 gaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagaga 117  Q
    ||||| || |||||||| || || |||||||| ||||||| |||||||||||  |||||||||| || ||||||||| || || || ||||||||||| |    
T  24951788 gaagaagccgtcagagaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatggtaacggacaccacaagaagaaagaaa 24951887  T
Q  118 ctgaagtagggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgctgc 184  Q
    | |||||||||||||| | ||||||| || |||||||||||||||||||||  || |||||||||||    
T  24951888 cggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctatcaatgctgc 24951954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 30168171 - 30168379
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  | |||||| | ||  ||||||||||| || || ||||||||||| |||||||| ||||||||||  || |    
T  30168171 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctg 30168270  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||||||||||||| |||  ||||||||||| |||||  | |||||| | |||   || |||| ||| ||||||||||| |||||||||||    
T  30168271 gagccggtcaatccatggctactattgctcccatcaatgcagctcaaatgcctccgtcatacccatatatgccatattctcagcatccgttcttcccacc 30168370  T
Q  242 attctatca 250  Q
     || |||||    
T  30168371 gttttatca 30168379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 33516058 - 33516266
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||||| | || |||||||||||| || || ||||||||||| |||||||| |||||||| |  || |    
T  33516058 attgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtgtcagctg 33516157  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || |||||||||||||||| ||||  ||||||||||| |||||  | |||||| | |||   || |||| ||| ||||||||||| |||||||||||    
T  33516158 gagccggtcaatccatggctaccgttgctcccatcaatgcggctcaaatgcctccgtcatacccatatatgccatattctcagcatccgttcttcccacc 33516257  T
Q  242 attctatca 250  Q
     || |||||    
T  33516258 gttttatca 33516266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 8665935 - 8665727
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | |  ||||| | || |||||||||||| || || ||||||||||| |||||||| ||||||||||  || |    
T  8665935 attgtgtttgagaaagctgaatcttctacgagcgcatcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctg 8665836  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  || |||||||| |||||  | |||||||| |||   || ||||  || ||||||||||||||||| || ||    
T  8665835 gagccggtcaatcaatggctactgttgctcctatcaatgcagctcaaatgcctccgccatacccatatatgccgtattctcagcatcctttctttccgcc 8665736  T
Q  242 attctatca 250  Q
    ||| |||||    
T  8665735 attttatca 8665727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 9317153 - 9317361
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  | |||||||| || |||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  9317153 attgtgtttgagaaagctgaatcctctgtgagtgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 9317252  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  9317253 gagccggtcaatcaatggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 9317352  T
Q  242 attctatca 250  Q
     || |||||    
T  9317353 gttttatca 9317361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 24681139 - 24681347
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||||| | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  24681139 attgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 24681238  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || |||||||||||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || |||||||||||||||||||| ||    
T  24681239 gagccggtcaatccatggctactgttgcacctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatcctttcttcccgcc 24681338  T
Q  242 attctatca 250  Q
    ||| |||||    
T  24681339 attttatca 24681347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 24723666 - 24723874
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||||| | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  24723666 attgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 24723765  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || |||||||||||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || |||||||||||||||||||| ||    
T  24723766 gagccggtcaatccatggctactgttgcacctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatcctttcttcccgcc 24723865  T
Q  242 attctatca 250  Q
    ||| |||||    
T  24723866 attttatca 24723874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 11549056 - 11549195
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  |||||||| | || |||||||||||| || || ||||||||||| || |||||||||||||| |  || |    
T  11549056 attgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctg 11549155  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgc 181  Q
    || || |||||||||||||||||||||  || ||||||||    
T  11549156 gagccggtcaatccatggctactgttgctcctatcaatgc 11549195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 39 - 250
Target Start/End: Complemental strand, 15759320 - 15759109
Alignment:
Q  39 attattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatg 138  Q
    ||||||||||||||||||| |||||| ||||||| ||| || | || |||||||||||| || || ||||||||||| |||||||| |||||||| |  |    
T  15759320 attattgtgtttgagaaagctgaatcttctgcaagtgcgtcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtgtcag 15759221  T
Q  139 ccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttccc 238  Q
    | ||| |  ||||||| |||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| ||||||||    
T  15759220 ctggagcaggtcaatcaatggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttccc 15759121  T
Q  239 accattctatca 250  Q
    ||| || |||||    
T  15759120 accgttttatca 15759109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 42 - 181
Target Start/End: Complemental strand, 23718448 - 23718309
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  |||||||| | || |||||||||||| || || ||||||||||| || |||||||||||||| |  || |    
T  23718448 attgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctg 23718349  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgc 181  Q
    || || |||||||||||||||||||||  || ||||||||    
T  23718348 gagccggtcaatccatggctactgttgctcctatcaatgc 23718309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 42 - 181
Target Start/End: Complemental strand, 23752910 - 23752771
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  |||||||| | || |||||||||||| || || ||||||||||| || |||||||||||||| |  || |    
T  23752910 attgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctg 23752811  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgc 181  Q
    || || |||||||||||||||||||||  || ||||||||    
T  23752810 gagccggtcaatccatggctactgttgctcctatcaatgc 23752771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 30934338 - 30934477
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  |||||||||| || |||||||||||| || || ||||||||||| || |||||||||||||| | | |||    
T  30934338 attgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtctaccg 30934437  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgc 181  Q
    || || | ||||||||| |||||||||  || ||||||||    
T  30934438 gagccggccaatccatgactactgttgctcctatcaatgc 30934477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 42 - 187
Target Start/End: Original strand, 33777189 - 33777334
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  |||||||| | || |||||||||||| || || ||||||||||| || |||||||||||||| |  || |    
T  33777189 attgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctg 33777288  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctca 187  Q
    || |  |||||||||||||||||||||  || |||||||| |||||    
T  33777289 gagctggtcaatccatggctactgttgctcctatcaatgcagctca 33777334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 2510753 - 2510961
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  | |||||||| || |||||||||||| || || ||||||||||| || ||||| || |||||||  || |    
T  2510753 attgtgtttgagaaagctgaatcctctgtgagtgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtgggaatggtatcagctg 2510852  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || |||||||||||||||| ||||  || |||||||| || ||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  2510853 gagccggtcaatccatggctaccgttgctcctatcaatgcagcccaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 2510952  T
Q  242 attctatca 250  Q
     || |||||    
T  2510953 gttttatca 2510961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 18375872 - 18375664
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||||| |  | ||| |||||||| || || ||||||||||| || ||||| ||||||||||  || |    
T  18375872 attgtgtttgagaaagctgaatcttctacgagtgcatcgaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctg 18375773  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  ||||||||||| |||||  | |||||| | |||   || |||| ||| ||||||||||| |||||||||||    
T  18375772 gagccggtcaatcaatggctactgttgctcccatcaatgcagctcaaatgcctccgtcatacccatatatgccatattctcagcatccgttcttcccacc 18375673  T
Q  242 attctatca 250  Q
     || |||||    
T  18375672 gttttatca 18375664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 18501208 - 18501000
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  ||||| || | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  18501208 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 18501109  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  || ||||||||  ||||  | |||||| | |||   |||||||  || |||||||||||||||||||||||    
T  18501108 gagccggtcaatcaatggctactgttgctcctatcaatgcaactcaaatgcctccgtcatacccatacatgccgtattctcagcatcctttcttcccacc 18501009  T
Q  242 attctatca 250  Q
     || |||||    
T  18501008 gttttatca 18501000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 250
Target Start/End: Original strand, 26480054 - 26480302
Alignment:
Q  2 catgggaacccacttagaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcat 101  Q
    ||||||||||| | | || || || ||||| || || || |||||||||||||||| |||||||||||  | |||||| | ||  ||||||||||| ||     
T  26480054 catgggaacccgccttgaggaagccgtcagggatgggatcattgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacac 26480153  T
Q  102 cataagaagaaagagactgaagtagggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgt 201  Q
    || ||||||||||| |||||||| |||||||| |  || ||| || ||||||| |||||||||||||  || |||||||| |||||  | |||||| | |    
T  26480154 cacaagaagaaagaaactgaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcctatcaatgcagctcaaatgcctccgtcat 26480253  T
Q  202 acgagtacatgcaatactctcagcatcctttcttcccaccattctatca 250  Q
    ||   || ||||  || ||||||||||| ||||||||||| || |||||    
T  26480254 acccatatatgccgtattctcagcatccgttcttcccaccgttttatca 26480302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 37771459 - 37771251
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||||| | || |||||||||||| || || ||||||||||| || ||||| ||||||||||  || |    
T  37771459 attgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctg 37771360  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  || |||||||| |||||  | |||||| ||||    || ||||  || ||||||||||| |||||||||||    
T  37771359 gagccggtcaatcaatggctactgttgcacctatcaatgcagctcaaatgcctccgtcgtatccatatatgccgtattctcagcatccgttcttcccacc 37771260  T
Q  242 attctatca 250  Q
     || |||||    
T  37771259 gttttatca 37771251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 43077951 - 43078159
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  ||||| || | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |   | |    
T  43077951 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcaactg 43078050  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||| | |||||||||||||  || |||||||| |||||  | |||||| |||||   |||||||  || |||||||||||||||||||||||    
T  43078051 gagccggtcaagctatggctactgttgcacctatcaatgcagctcaaatgcctccgtcgtacccatacatgccgtattctcagcatcctttcttcccacc 43078150  T
Q  242 attctatca 250  Q
     || |||||    
T  43078151 gttttatca 43078159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 42 - 181
Target Start/End: Complemental strand, 22999574 - 22999435
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  |||||||| | || |||||||||||| || || ||||||||||| || ||| |||||||||| |  || |    
T  22999574 attgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaaatagggatggtgtcagctg 22999475  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgc 181  Q
    || || |||||||||||||||||||||  || ||||||||    
T  22999474 gagccggtcaatccatggctactgttgctcctatcaatgc 22999435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 42 - 241
Target Start/End: Complemental strand, 40474012 - 40473813
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  ||||| || | ||  || |||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  40474012 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 40473913  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| ||||||||||||| ||| |||||||| |||||  | |||||| | |||    ||||||  |||||||||||||| |||||||||||    
T  40473912 gagccggtcaatcaatggctactgttgcccctatcaatgcagctcaaatgcctccgtcatacccacacatgccgtactctcagcatccgttcttcccacc 40473813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 3789228 - 3789436
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  | |||||| | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  3789228 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 3789327  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||| ||||  || |||||||| |||||  | |||||| | |||   || ||||  |||||||||||||| |||||||||||    
T  3789328 gagccggtcaatcaatggctaccgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtactctcagcatccgttcttcccacc 3789427  T
Q  242 attctatca 250  Q
     || |||||    
T  3789428 gttttatca 3789436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 5637612 - 5637820
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  | |||||| | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  5637612 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 5637711  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  5637712 gagccggtcaatcaatggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 5637811  T
Q  242 attctatca 250  Q
     || |||||    
T  5637812 gttttatca 5637820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 6874004 - 6874212
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  | |||||||| || |||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  6874004 attgtgtttgagaaagctgaatcctctgtgagtgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 6874103  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| ||| |||||||||  || ||||||||  ||||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  6874104 gagccggtcaatcaatgactactgttgctcctatcaatgcaactcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 6874203  T
Q  242 attctatca 250  Q
     || |||||    
T  6874204 gttttatca 6874212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 30151720 - 30151928
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||||| |  | ||| |||||||| || || ||||||||||| || ||||| ||||||||||  || |    
T  30151720 attgtgtttgagaaagctgaatcttctacgagtgcatcgaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctg 30151819  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  ||||||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  30151820 gagccggtcaatcaatggctactgttgctcccatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 30151919  T
Q  242 attctatca 250  Q
     || |||||    
T  30151920 gttttatca 30151928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 31431130 - 31431338
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  | |||||| | ||  ||||||||||| || || ||||||||||| || ||||| ||||||||||  || |    
T  31431130 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctg 31431229  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || |||||||  ||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  31431230 gagccggtcaatctgtggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 31431329  T
Q  242 attctatca 250  Q
     || |||||    
T  31431330 gttttatca 31431338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 31826879 - 31826671
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||||| | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  31826879 attgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 31826780  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  31826779 gagccggtcaatcaatggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 31826680  T
Q  242 attctatca 250  Q
     || |||||    
T  31826679 gttttatca 31826671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 37671952 - 37671744
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||||| | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  ||||    
T  37671952 attgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagccg 37671853  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||| ||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  37671852 gagccggtcaatctatggctaccgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 37671753  T
Q  242 attctatca 250  Q
     || |||||    
T  37671752 gttttatca 37671744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 181
Target Start/End: Complemental strand, 15659220 - 15659081
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  |||||||| | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  15659220 attgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 15659121  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgc 181  Q
    || || ||||||| |||||||||||||  || ||||||||    
T  15659120 gagccggtcaatcaatggctactgttgctcctatcaatgc 15659081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 168
Target Start/End: Complemental strand, 9549003 - 9548877
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  | |||||| | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  9549003 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 9548904  T
Q  142 gaaccagtcaatccatggctactgttg 168  Q
    || || ||||||||||||| |||||||    
T  9548903 gagccggtcaatccatggccactgttg 9548877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 11325630 - 11325707
Alignment:
Q  173 catcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccattctatca 250  Q
    ||||||||||||||||||||||||| |||||  |||   |||||||||||||||||| ||||| ||||||||||||||    
T  11325630 catcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatca 11325707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 13184974 - 13184897
Alignment:
Q  173 catcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccattctatca 250  Q
    ||||||||||||||||||||||||| |||||  |||   |||||||||||||||||| ||||| ||||||||||||||    
T  13184974 catcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatca 13184897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 13440820 - 13440743
Alignment:
Q  173 catcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccattctatca 250  Q
    ||||||||||||||||||||||||| |||||  |||   |||||||||||||||||| ||||| ||||||||||||||    
T  13440820 catcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatca 13440743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 33877083 - 33877160
Alignment:
Q  173 catcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccattctatca 250  Q
    ||||||||||||||||||||||||| |||||  |||   |||||||||||||||||| ||||| ||||||||||||||    
T  33877083 catcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatca 33877160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 42 - 187
Target Start/End: Original strand, 37754670 - 37754815
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||||||| ||| || | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  37754670 attgtgtttgagaaagctgaatcttctgcaagtgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 37754769  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctca 187  Q
    || || ||||||| |||||||||||||  || |||||||| |||||    
T  37754770 gagccggtcaatcaatggctactgttgcacctatcaatgcagctca 37754815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 12131857 - 12132065
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||||| | || ||| |||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  12131857 attgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 12131956  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  12131957 gagccggtcaatcaatggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 12132056  T
Q  242 attctatca 250  Q
     || |||||    
T  12132057 gttttatca 12132065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 250
Target Start/End: Complemental strand, 37359130 - 37358907
Alignment:
Q  27 gtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtag 126  Q
    |||||||| || || ||||| |||||||||| |||||| ||| | | |||||| | || |||||||||||| || || ||||||||||| || ||||| |    
T  37359130 gtcagagatgggatcattgtatttgagaaagctgaatcttctacgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtgg 37359031  T
Q  127 ggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagca 226  Q
    ||||||| |  || ||| || ||||||| |||||||| ||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||    
T  37359030 ggatggtgtcagctggagccggtcaatctatggctaccgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagca 37358931  T
Q  227 tcctttcttcccaccattctatca 250  Q
    ||| ||||||||||| || |||||    
T  37358930 tccgttcttcccaccgttttatca 37358907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 45 - 168
Target Start/End: Original strand, 41674414 - 41674537
Alignment:
Q  45 gtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccggaa 144  Q
    |||||||||||||  ||||||||||  ||||| || | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  || |||     
T  41674414 gtgtttgagaaagccgaatcctctgtgaatgcgtcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggag 41674513  T
Q  145 ccagtcaatccatggctactgttg 168  Q
    || |||||||||||||||||||||    
T  41674514 ccggtcaatccatggctactgttg 41674537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 34616223 - 34616431
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  | |||||| | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  34616223 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 34616322  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||| | |||||||||||||  || |||||||| || ||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  34616323 gagccggtcaagctatggctactgttgcacctatcaatgcagcccaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 34616422  T
Q  242 attctatca 250  Q
     || |||||    
T  34616423 gttttatca 34616431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 187
Target Start/End: Complemental strand, 13325304 - 13325159
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  | |||||| | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  13325304 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 13325205  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctca 187  Q
    || |  ||||||| |||||||| ||||  || |||||||| |||||    
T  13325204 gagctggtcaatcaatggctaccgttgctcctatcaatgcagctca 13325159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 250
Target Start/End: Original strand, 28648931 - 28649136
Alignment:
Q  45 gtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccggaa 144  Q
    ||||||||||||| |||||||||||  ||||| || | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |||     
T  28648931 gtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggag 28649030  T
Q  145 ccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccatt 244  Q
    || ||||| | |||||||||||||   | |||||| | |||||  | |||||| | |||   || ||||  || |||||||||||||||||||| |||||    
T  28649031 ccggtcaagctatggctactgttgcaactatcaatacagctcaaatgcctccgtcatacccatatatgccgtattctcagcatcctttcttcccgccatt 28649130  T
Q  245 ctatca 250  Q
     |||||    
T  28649131 ttatca 28649136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 250
Target Start/End: Complemental strand, 29967523 - 29967318
Alignment:
Q  45 gtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccggaa 144  Q
    ||||||||||||| |||||||||||  ||||| || | ||  ||||||||||| || || || |||||||| || ||||| |||||||| |  || |||     
T  29967523 gtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaaaaagaaagaaacggaagtggggatggtgtcagctggag 29967424  T
Q  145 ccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccatt 244  Q
    || | ||||| |||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| ||||||||||| ||    
T  29967423 ccgggcaatcaatggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccaccgtt 29967324  T
Q  245 ctatca 250  Q
     |||||    
T  29967323 ttatca 29967318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 250
Target Start/End: Original strand, 30029120 - 30029325
Alignment:
Q  45 gtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccggaa 144  Q
    ||||||||||||| |||||||||||  ||||| || | ||  ||||||||||| || || || |||||||| || ||||| |||||||| |  || |||     
T  30029120 gtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaaaaagaaagaaacggaagtggggatggtgtcagctggag 30029219  T
Q  145 ccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccatt 244  Q
    || | ||||| |||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| ||||||||||| ||    
T  30029220 ccgggcaatcaatggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccaccgtt 30029319  T
Q  245 ctatca 250  Q
     |||||    
T  30029320 ttatca 30029325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 32599929 - 32599721
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||||| | || |||||||||||| || || |||||||| || || ||||| |||||||| |  || |    
T  32599929 attgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatggtaatggacaccacaagaagaaggaaacggaagtggggatggtgtcagctg 32599830  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| ||| |||||||||  || |||||||| || ||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  32599829 gagccggtcaatcaatgactactgttgctcctatcaatgcagcccaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 32599730  T
Q  242 attctatca 250  Q
     || |||||    
T  32599729 gttttatca 32599721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 133
Target Start/End: Complemental strand, 28960258 - 28960167
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggt 133  Q
    |||||||||||||||| |||||| ||| | | |||||| | || |||||||||||| || || ||||||||||| || ||||| ||||||||    
T  28960258 attgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggt 28960167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 66; Significance: 3e-29; HSPs: 3)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 42 - 203
Target Start/End: Complemental strand, 40632 - 40471
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  |||||||||| || ||||||||| || || || ||||||||||| || |||||||||||||| | |||||    
T  40632 attgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatggtaacggacaccacaagaagaaagaaacggaagtagggatggtgtctgccg 40533  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtac 203  Q
    || || |||||||||||||||||||||  || |||||||| || ||  | ||||||||||||    
T  40532 gagccggtcaatccatggctactgttgctcctatcaatgcagcccaaatgcctccgccgtac 40471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 29456 - 29664
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| || |||| |||||||||||  |||||||||| || ||||||||| || || || ||||||||||| || |||||||||||||| | |||||    
T  29456 attgtgttcgaaaaagctgaatcctctgtgaatgcatcaaagaggtatggtaacggacaccacaagaagaaagaaacggaagtagggatggtgtctgccg 29555  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || |||||||||||||||||||||  || || |||||||| ||  | |||||  |||||  |||   ||  || ||||||||||||||||| || ||    
T  29556 gagccggtcaatccatggctactgttgctcctattaatgctgcccaaatgcctccatcgtacccgtatgcgccgtattctcagcatcctttctttccgcc 29655  T
Q  242 attctatca 250  Q
    |||||||||    
T  29656 attctatca 29664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 168
Target Start/End: Complemental strand, 47588 - 47422
Alignment:
Q  2 catgggaacccacttagaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcat 101  Q
    |||||||||||   | ||||| || ||||| || || || |||||||| ||||||| ||||||||| |  |||||||||| || |||||||||||| ||     
T  47588 catgggaacccgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctccgtgaatgcatcaaagaggtatggtaatggacac 47489  T
Q  102 cataagaagaaagagactgaagtagggatggtatatgccggaaccagtcaatccatggctactgttg 168  Q
    || ||||||||||| || ||| |||||||||| |  || ||| || ||||| |||||||||||||||    
T  47488 cacaagaagaaagaaacggaaatagggatggtgtcagctggagccggtcaacccatggctactgttg 47422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 5e-28; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 24863407 - 24863546
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  |||||||||| || |||||||||||| || || ||||||||||| || |||||||||||||| |  ||||    
T  24863407 attgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagccg 24863506  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgc 181  Q
    || || |||||||||||||||||||||  || ||||||||    
T  24863507 gagccggtcaatccatggctactgttgctcctatcaatgc 24863546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 30558522 - 30558314
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||||| | || |||||||||||| || || ||||||||||| |||||||| |||||||| |  || |    
T  30558522 attgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtgtcagctg 30558423  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || |||||||||||||||| ||||  ||||||||||| |||||  | |||||| | |||   || |||| ||| ||||||||||| |||||||||||    
T  30558422 gagccggtcaatccatggctaccgttgctcccatcaatgcagctcaaatgcctccgtcatacccatatatgccatattctcagcatccgttcttcccacc 30558323  T
Q  242 attctatca 250  Q
     || |||||    
T  30558322 gttttatca 30558314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 42 - 181
Target Start/End: Complemental strand, 13299457 - 13299318
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  |||||||||| ||  ||||||||||| || || ||||||||||| || |||||||||||||| | |||||    
T  13299457 attgtgttcgagaaagctgaatcctctgtgaatgcatcaaagagatatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtctgccg 13299358  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgc 181  Q
    || |  |||||||||||||||||||||  || ||||||||    
T  13299357 gagctggtcaatccatggctactgttgctcctatcaatgc 13299318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 26999763 - 26999902
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  |||||||||| || |||||||||||| || || ||||||||||| || |||||||||||||| |  || |    
T  26999763 attgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctg 26999862  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgc 181  Q
    || || |||||||||||||||||||||  || ||||||||    
T  26999863 gagccggtcaatccatggctactgttgctcctatcaatgc 26999902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 42 - 184
Target Start/End: Complemental strand, 24305124 - 24304982
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  |||||||||| || |||||||||||| || || ||||||||||| || |||||||||||||| |  || |    
T  24305124 attgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctg 24305025  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgc 184  Q
    || || ||||||||||||||||||| |  || |||||||||||    
T  24305024 gagccggtcaatccatggctactgtcgctcctatcaatgctgc 24304982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 42 - 187
Target Start/End: Original strand, 26918070 - 26918215
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  |||||||| | || |||||||||||| || || ||||||||||| || |||||||||||||| |  || |    
T  26918070 attgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctg 26918169  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctca 187  Q
    || || |||||||||||||||||||||  || |||||||| |||||    
T  26918170 gagccggtcaatccatggctactgttgctcctatcaatgcagctca 26918215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 3695753 - 3695961
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  |||||||| | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  3695753 attgtgtttgagaaagctgaatcctctgtgaatgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 3695852  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||| ||||  || |||||||| |||||  | |||||| | |||   |||||||  || |||||||||||||||||||||||    
T  3695853 gagccggtcaatcaatggctaccgttgctcctatcaatgcagctcaaatgcctccgtcatacccatacatgccgtattctcagcatcctttcttcccacc 3695952  T
Q  242 attctatca 250  Q
     || |||||    
T  3695953 gttttatca 3695961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 42 - 181
Target Start/End: Complemental strand, 15424823 - 15424684
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||| ||||  |||||||||| || |||||||||||| || || ||||||||||| || |||||||||||||| |  || |    
T  15424823 attgtgttcgagaaagctgaatcttctgtgaatgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctg 15424724  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgc 181  Q
    || || |||||||||||||||||||||  || ||||||||    
T  15424723 gagccggtcaatccatggctactgttgctcctatcaatgc 15424684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 26988691 - 26988830
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  |||||||| | || |||||||||||| || || ||||||||||| || |||||||||||||| |  || |    
T  26988691 attgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctg 26988790  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgc 181  Q
    || || |||||||||||||||||||||  || ||||||||    
T  26988791 gagccggtcaatccatggctactgttgctcctatcaatgc 26988830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 29549168 - 29549376
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  | |||||| | || |||||||||||| ||||| ||||||||||| || ||||| |||||||| |  || |    
T  29549168 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagaggtatggtaatggacatcacaagaagaaagaaacggaagtggggatggtgtcagctg 29549267  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||| ||||  || |||||||| |||||  | |||||| | |||   ||  |||  |||||||||||||| |||||||||||    
T  29549268 gagccggtcaatctatggctaccgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatgtgccgtactctcagcatccgttcttcccacc 29549367  T
Q  242 attctatca 250  Q
     || |||||    
T  29549368 gttttatca 29549376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 42 - 241
Target Start/End: Complemental strand, 34463867 - 34463668
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  ||||| || | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  34463867 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 34463768  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| ||| |||||||||  || |||||||| |||||  | |||||| | |||   |||||||  || |||||||||||||||||||||||    
T  34463767 gagccggtcaatcaatgactactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatacatgccgtattctcagcatcctttcttcccacc 34463668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 168
Target Start/End: Original strand, 16749544 - 16749670
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  | |||||| | || |||||||||||| || || ||||||||||| || |||||||||||||| |  || |    
T  16749544 attgtgttcgagaaagctgaatcctctgtgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctg 16749643  T
Q  142 gaaccagtcaatccatggctactgttg 168  Q
    || || |||||||||||||||||||||    
T  16749644 gagccggtcaatccatggctactgttg 16749670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 4524979 - 4525187
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||||| | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  4524979 attgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 4525078  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  4525079 gagccggtcaatctatggctactgttgcacctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 4525178  T
Q  242 attctatca 250  Q
     || |||||    
T  4525179 gttttatca 4525187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 27007402 - 27007610
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  | |||||| | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  27007402 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 27007501  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  27007502 gagccggtcaatcaatggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacctatatatgccgtattctcagcatccattcttcccacc 27007601  T
Q  242 attctatca 250  Q
     || |||||    
T  27007602 gttttatca 27007610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 29501096 - 29501304
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||| ||  ||||| || | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  29501096 attgtgtttgagaaagctgaatcctttgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 29501195  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || |||||||||||||||| ||||  || |||||||| |||||  | |||||| |||||   || ||||  || ||||||||||| |||||||||||    
T  29501196 gagccggtcaatccatggctaccgttgctcctatcaatgcagctcaaatgcctccgtcgtacccatatatgccgtattctcagcatccattcttcccacc 29501295  T
Q  242 attctatca 250  Q
     || |||||    
T  29501296 gttttatca 29501304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 181
Target Start/End: Complemental strand, 22935383 - 22935244
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  |||||||||| || ||||||||| || || || ||||||||||| || ||| |||||||||| |  ||||    
T  22935383 attgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatggtaacggacaccacaagaagaaagaaacggaaatagggatggtgtcagccg 22935284  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgc 181  Q
    |  || ||||||||||| |||||||||  || ||||||||    
T  22935283 gggccggtcaatccatgactactgttgctcctatcaatgc 22935244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 181
Target Start/End: Complemental strand, 23857828 - 23857689
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  |||||||||| || ||||||||| || || || ||||||||||| || ||| |||||||||| |  ||||    
T  23857828 attgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatggtaacggacaccacaagaagaaagaaacggaaatagggatggtgtcagccg 23857729  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgc 181  Q
    |  || ||||||||||| |||||||||  || ||||||||    
T  23857728 gggccggtcaatccatgactactgttgctcctatcaatgc 23857689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 42 - 187
Target Start/End: Original strand, 4757451 - 4757596
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||||| | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  ||||    
T  4757451 attgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagccg 4757550  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctca 187  Q
    || || ||||||| ||||||||||| |  || |||||||| |||||    
T  4757551 gagccggtcaatcaatggctactgtcgctcctatcaatgcagctca 4757596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 42 - 187
Target Start/End: Original strand, 4772687 - 4772832
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  | |||||| | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  ||||    
T  4772687 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagccg 4772786  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctca 187  Q
    || || ||||||| |||||||| ||||  || |||||||| |||||    
T  4772787 gagccggtcaatctatggctaccgttgctcctatcaatgcagctca 4772832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 13522445 - 13522368
Alignment:
Q  173 catcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccattctatca 250  Q
    ||||||||||||||||||||||||| |||||  |||   |||||||||||||||||| ||||| ||||||||||||||    
T  13522445 catcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatca 13522368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 137 - 250
Target Start/End: Complemental strand, 22477684 - 22477571
Alignment:
Q  137 tgccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttc 236  Q
    ||||||||| |||||||||||||||||||||| ||| || |||||||| ||  |||||| | |||||  |||   ||| |||||||||||||| |||||     
T  22477684 tgccggaactagtcaatccatggctactgttgccccaattaatgctgcccaattacctctgtcgtacccgtatgcgcagtactctcagcatcccttcttt 22477585  T
Q  237 ccaccattctatca 250  Q
    ||||||||||||||    
T  22477584 ccaccattctatca 22477571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 28162481 - 28162558
Alignment:
Q  173 catcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccattctatca 250  Q
    ||||||||||||||||||||||||  |||||  |||   |||||||||||||||||||||||| ||||||||||||||    
T  28162481 catcaatgctgctcagctacctccatcgtacccgtatgcgcaatactctcagcatcctttctttccaccattctatca 28162558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 33374628 - 33374551
Alignment:
Q  173 catcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccattctatca 250  Q
    ||||||||||||||||||||||||| |||||  |||   |||||||||||||||||| ||||| ||||||||||||||    
T  33374628 catcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatca 33374551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 168
Target Start/End: Original strand, 20160357 - 20160520
Alignment:
Q  2 catgggaacccacttagaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcat 101  Q
    |||||||||||   ||||||| |||||||| || || || ||||||||||| |||||||||||||| |  |  ||| |||  | ||| ||||| ||||||    
T  20160357 catgggaacccgtctagaagaagctgtcagggaaggaatcattgtgtttgataaaggtgaatcctccgtgagcgcaccaaaaaggtacggtaacggtcat 20160456  T
Q  102 cataagaagaaagagactgaagtagggatggtatatgccggaaccagtcaatccatggctactgttg 168  Q
    ||||||||||| || || ||||||||||||| || ||| |   || |||||||||||||||||||||    
T  20160457 cataagaagaaggaaacagaagtagggatggaatttgctg---ccggtcaatccatggctactgttg 20160520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 168
Target Start/End: Complemental strand, 22172474 - 22172311
Alignment:
Q  2 catgggaacccacttagaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcat 101  Q
    |||||||||||   ||||||| |||||||| || || || ||||||||||| |||||||||||||| |  |  ||| |||  | ||| ||||| ||||||    
T  22172474 catgggaacccgtctagaagaagctgtcagggaaggaatcattgtgtttgataaaggtgaatcctccgtgagcgcaccaaaaaggtacggtaacggtcat 22172375  T
Q  102 cataagaagaaagagactgaagtagggatggtatatgccggaaccagtcaatccatggctactgttg 168  Q
    ||||||||||| || || ||||||||||||| || ||| |   || |||||||||||||||||||||    
T  22172374 cataagaagaaggaaacagaagtagggatggaatttgctg---ccggtcaatccatggctactgttg 22172311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 27044080 - 27044288
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  | |||||| | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  27044080 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 27044179  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || |||||||||||||||| ||||  || |||||||| || ||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  27044180 gagccggtcaatccatggctaccgttgctcctatcaatgcagcccaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 27044279  T
Q  242 attctatca 250  Q
     || |||||    
T  27044280 gttttatca 27044288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 8892682 - 8892605
Alignment:
Q  173 catcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccattctatca 250  Q
    ||||||||||||||||||||||||| |||||  |||   |||||||||||||||||| ||||| |||||||| |||||    
T  8892682 catcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattatatca 8892605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 8903917 - 8903840
Alignment:
Q  173 catcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccattctatca 250  Q
    ||||||||||||||||||||||||| |||||  |||   |||||||||||||||||  ||||| ||||||||||||||    
T  8903917 catcaatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatctcttctttccaccattctatca 8903840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 45 - 250
Target Start/End: Complemental strand, 16944530 - 16944325
Alignment:
Q  45 gtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccggaa 144  Q
    ||||||||||||| |||||||||||  ||||| || | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |||     
T  16944530 gtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggag 16944431  T
Q  145 ccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccatt 244  Q
    || | ||||| |||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| ||||||||||| ||    
T  16944430 ccgggcaatcaatggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccaccgtt 16944331  T
Q  245 ctatca 250  Q
     |||||    
T  16944330 ttatca 16944325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 17024952 - 17025160
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    ||||||||||||||||  ||||||||||  |||||||| | || |||||||||||| || || ||||||||||| || ||||| || ||||| |  || |    
T  17024952 attgtgtttgagaaagccgaatcctctgtgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctg 17025051  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||| | |||||||||||||  || |||||||| || ||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  17025052 gagccggtcaagctatggctactgttgctcctatcaatgcagcccaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 17025151  T
Q  242 attctatca 250  Q
     || |||||    
T  17025152 gttttatca 17025160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 26778133 - 26777925
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | |  ||||| | || |||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  26778133 attgtgtttgagaaagctgaatcttctacgagcgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 26778034  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || | ||||| |||||||||||||  || |||||| | || ||  | |||||| | |||   |||||||  || |||||||||||||||||||||||    
T  26778033 gagccgggcaatcaatggctactgttgcacctatcaatacagcccaaatgcctccgtcatacccatacatgccgtattctcagcatcctttcttcccacc 26777934  T
Q  242 attctatca 250  Q
     || |||||    
T  26777933 gttttatca 26777925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 27484807 - 27485015
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  | |||||| | ||  || |||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  27484807 attgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 27484906  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||| ||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  27484907 gagccggtcaatcaatggctaccgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 27485006  T
Q  242 attctatca 250  Q
     || |||||    
T  27485007 gttttatca 27485015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 29572703 - 29572911
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||||| |  | ||| |||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  29572703 attgtgtttgagaaagctgaatcttctacgagtgcatcgaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 29572802  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  29572803 gagccggtcaatcaatggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 29572902  T
Q  242 attctatca 250  Q
     || |||||    
T  29572903 gttttatca 29572911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 250
Target Start/End: Complemental strand, 4546305 - 4546082
Alignment:
Q  27 gtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtag 126  Q
    |||||||| || || |||||||||||||||| |||||| ||| | | |||||| | || |||||||||||| || || ||||||||||| || ||||| |    
T  4546305 gtcagagatgggatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtgg 4546206  T
Q  127 ggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagca 226  Q
    | ||||| |  || | | || ||||||| |||||||| ||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||    
T  4546205 gaatggtgtcagctgcagccggtcaatctatggctaccgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagca 4546106  T
Q  227 tcctttcttcccaccattctatca 250  Q
    ||| ||||||||||| || |||||    
T  4546105 tccgttcttcccaccgttttatca 4546082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 250
Target Start/End: Original strand, 28207117 - 28207340
Alignment:
Q  27 gtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtag 126  Q
    |||||||| || || |||||||||||||||| |||||| ||| | | |||||| | || |||||||||||| || || ||||||||||| || ||||| |    
T  28207117 gtcagagatgggatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtgg 28207216  T
Q  127 ggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagca 226  Q
    | ||||| |  || | | || ||||||| |||||||| ||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||    
T  28207217 gaatggtgtcagctgcagccggtcaatctatggctaccgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagca 28207316  T
Q  227 tcctttcttcccaccattctatca 250  Q
    ||| ||||||||||| || |||||    
T  28207317 tccgttcttcccaccgttttatca 28207340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 187
Target Start/End: Complemental strand, 27360516 - 27360371
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||||| | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  27360516 attgtgtttgagaaagctgaatcttctacgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 27360417  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctca 187  Q
    || || ||||||| |||||||| ||||  || |||||||| |||||    
T  27360416 gagccggtcaatctatggctaccgttgctcctatcaatgcagctca 27360371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 187
Target Start/End: Complemental strand, 27450859 - 27450714
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||||| | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  27450859 attgtgtttgagaaagctgaatcttctacgagtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 27450760  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctca 187  Q
    || || ||||||| |||||||| ||||  || |||||||| |||||    
T  27450759 gagccggtcaatctatggctaccgttgctcctatcaatgcagctca 27450714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 250
Target Start/End: Complemental strand, 4724664 - 4724441
Alignment:
Q  27 gtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtag 126  Q
    |||||||| || || |||||||||||||||| |||||| ||| | | |||||| |  | |||||||||||| || || ||||||||||| || ||||| |    
T  4724664 gtcagagatgggatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaaaaggtatggtaatggacaccacaagaagaaagaaacggaagtgg 4724565  T
Q  127 ggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagca 226  Q
    | ||||| |  || | | || ||||||| |||||||| ||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||    
T  4724564 gaatggtgtcagctgcagccggtcaatctatggctaccgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagca 4724465  T
Q  227 tcctttcttcccaccattctatca 250  Q
    ||| ||||||||||| || |||||    
T  4724464 tccgttcttcccaccgttttatca 4724441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 241
Target Start/End: Original strand, 16673817 - 16674016
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  ||||| || | ||  ||||||||||| || || ||||||||||| || ||||| || ||||| |  || |    
T  16673817 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctg 16673916  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| || ||||| ||||  || |||||||| |||||  | |||||| | ||    || ||||  |||||||||||||| |||||||||||    
T  16673917 gagccggtcaatcaatagctaccgttgctcctatcaatgcagctcaaatgcctccgtcatatccatatatgccgtactctcagcatccgttcttcccacc 16674016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 133
Target Start/End: Complemental strand, 26116925 - 26116834
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggt 133  Q
    |||||||||||||||| |||||||||||    |||||| | ||  ||||||||||| || || ||||||||||| || ||||| ||||||||    
T  26116925 attgtgtttgagaaagctgaatcctctgtgggtgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggt 26116834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 26985 - 27124
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||| ||||||| |||||||||||  |||||||||| || |||||||||||| || || ||||||||||| || |||||||||||||| |  || |    
T  26985 attgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctg 27084  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgc 181  Q
    || || |||||||||||||||||||||  || ||||||||    
T  27085 gagccggtcaatccatggctactgttgctcctatcaatgc 27124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 7925 - 8133
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  |||||||| | || |||||||||||| || || ||||||||||| || ||||| ||||||||||  || |    
T  7925 attgtgtttgagaaagctgaatcctctgtgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctg 8024  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || |||||||  ||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  8025 gagccggtcaatctgtggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 8124  T
Q  242 attctatca 250  Q
     || |||||    
T  8125 gttttatca 8133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 187
Target Start/End: Complemental strand, 733 - 548
Alignment:
Q  2 catgggaacccacttagaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcat 101  Q
    |||||||||||   | ||||| || ||||| || || || |||||||| ||||||| |||||||||||  |||||||| | || |||||||||||| ||     
T  733 catgggaacccgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatggtaatggacac 634  T
Q  102 cataagaagaaagagactgaagtagggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgctgctca 187  Q
    || ||||||||||| || |||||||||||||| |   | ||| || |||||||||||||||||||||  || |||||||| |||||    
T  633 cacaagaagaaagaaacggaagtagggatggtgtcaactggagccggtcaatccatggctactgttgctcctatcaatgcagctca 548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 15493 - 15285
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||||| |  | ||| |||||||| || || ||||||||||| || ||||| ||||||||||  || |    
T  15493 attgtgtttgagaaagctgaatcttctacgagtgcatcgaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctg 15394  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  ||||||||||| |||||  | |||||| | |||   || |||| ||| ||||||||||| |||||||||||    
T  15393 gagccggtcaatcaatggctactgttgctcccatcaatgcagctcaaatgcctccgtcatacccatatatgccatattctcagcatccgttcttcccacc 15294  T
Q  242 attctatca 250  Q
     || |||||    
T  15293 gttttatca 15285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 26765 - 26557
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| ||||||||||| |||||| || | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  26765 attgtgtttgagaaagctgaatcctctgtaaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 26666  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  26665 gagccggtcaatcaatggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 26566  T
Q  242 attctatca 250  Q
     || |||||    
T  26565 gttttatca 26557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 3087 - 3010
Alignment:
Q  173 catcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccattctatca 250  Q
    ||||||||||||||||||||||||| |||||  ||||  |||||||||||||||||| ||||| ||||||||||||||    
T  3087 catcaatgctgctcagctacctccgtcgtacccgtacgcgcaatactctcagcatcccttctttccaccattctatca 3010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0350 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 7802 - 7594
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||| ||| | | |||||| | || ||| |||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  7802 attgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 7703  T
Q  142 gaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccacc 241  Q
    || || ||||||| |||||||||||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||||| |||||||||||    
T  7702 gagccggtcaatcaatggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccacc 7603  T
Q  242 attctatca 250  Q
     || |||||    
T  7602 gttttatca 7594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 241
Target Start/End: Original strand, 5682 - 5881
Alignment:
Q  42 attgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccg 141  Q
    |||||||||||||||| |||||||||||  ||||| || | ||  ||||||||||| || || ||||||||||| || ||||| |||||||| |  || |    
T  5682 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagt-gggatggtgtcagctg 5780  T
Q  142 gaaccagtcaatc-catggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccac 240  Q
    || || |||||||  |||||||||||||  || ||||||||  ||||  | |||||| | |||   |||||||  || ||||||||||||||||||||||    
T  5781 gagccggtcaatcaaatggctactgttgctcctatcaatgcaactcaaatgcctccgtcatacccatacatgccgtattctcagcatcctttcttcccac 5880  T

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Target: scaffold0038 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 250
Target Start/End: Original strand, 7615 - 7838
Alignment:
Q  27 gtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtatggtaatggtcatcataagaagaaagagactgaagtag 126  Q
    |||||||| || || |||||||||||||||| |||||| ||| | | |||||| | || |||||||||||| || || ||||||||||| || ||||| |    
T  7615 gtcagagatgggatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtgg 7714  T
Q  127 ggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgctgctcagctacctccgccgtacgagtacatgcaatactctcagca 226  Q
    | ||||| |  || | | || ||||||| |||||||| ||||  || |||||||| |||||  | |||||| | |||   || ||||  || ||||||||    
T  7715 gaatggtgtcagctgcagccggtcaatctatggctaccgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcagca 7814  T
Q  227 tcctttcttcccaccattctatca 250  Q
    ||| ||||||||||| || |||||    
T  7815 tccgttcttcccaccgttttatca 7838  T

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Target: scaffold0159 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 250
Target Start/End: Complemental strand, 9584 - 9421
Alignment:
Q  87 tatggtaatggtcatcataagaagaaagagactgaagtagggatggtatatgccggaaccagtcaatccatggctactgttgtccccatcaatgctgctc 186  Q
    ||||||||||| || || ||||||||||| || ||||| |||||||| |  || ||| || |||||||||||||||| || |  || |||||||| ||||    
T  9584 tatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgggagccggtcaatccatggctaccgtcgctcctatcaatgcagctc 9485  T
Q  187 agctacctccgccgtacgagtacatgcaatactctcagcatcctttcttcccaccattctatca 250  Q
    |  | |||||| | |||   || ||||  || ||||||||||| ||||||||||| || |||||    
T  9484 aaatgcctccgtcatacccatatatgccgtattctcagcatccgttcttcccaccgttttatca 9421  T

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Target: scaffold0099 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 48742 - 48630
Alignment:
Q  18 gaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatc-aaggaagtatggtaa-tggtcatcataagaagaaaga 115  Q
    ||||| || |||||||| || || |||||||| ||||||| |||||||||||  |||||||| || || |||||||||  || || || |||||||||||    
T  48742 gaagaagccgtcagagaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaaagaggtatggtaacgggacaccacaagaagaaaga 48643  T
Q  116 gactgaagtaggg 128  Q
     || |||||||||    
T  48642 aacggaagtaggg 48630  T

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