View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10261A_low_211 (Length: 260)
Name: NF10261A_low_211
Description: NF10261A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10261A_low_211 |
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Alignment Details
Target: chr5 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 12 - 254
Target Start/End: Original strand, 29668834 - 29669076
Alignment:
| Q |
12 |
atgaacaacgccatttcagatcgtaaggaaaccccttctgacgacttaatgtcacgtttcatgaagaaacgagacatagacggaaagccaatcaacgcca |
111 |
Q |
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| T |
29668834 |
atgaacaacgccatttcagatcgtaaggaaaccccttctgatgacttaatgtcacgtttcatgaagaaacgagacatagacggaaagccaatcaacgcca |
29668933 |
T |
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| Q |
112 |
cgattctacaacacatcatcttaaacttcatccttgctggaagggacacgtcatcagttgctctcggctggttcttctggctggtcatgaaccatccaaa |
211 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || |
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| T |
29668934 |
cgattctacaacacatcatcttaaacttcatccttgctggaagggacacgtcatcagttgctctcagctggttcttctggctggtcatgaaccatccgaa |
29669033 |
T |
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| Q |
212 |
agttgaggagaaaataatcaaggagttaaccactgttcttgag |
254 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29669034 |
agttgaggagaaaataatcaaggagttaaccactgttcttgag |
29669076 |
T |
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