View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10261A_low_213 (Length: 258)
Name: NF10261A_low_213
Description: NF10261A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10261A_low_213 |
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Alignment Details
Target: chr5 (Bit Score: 176; Significance: 7e-95; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 24 - 239
Target Start/End: Original strand, 7617528 - 7617741
Alignment:
| Q |
24 |
gttagttaatttattttgaagtataaactaaatataattagcaaagtgcactgtttttccatagtgtaaagccaatttcgctgctactttccggnnnnnn |
123 |
Q |
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| T |
7617528 |
gttagttaatttattttgaagtataaactaaatataattagcaaagtgcactgtttttccatagtgtaaagccaatttcgctgctactttccggtttttt |
7617627 |
T |
|
| Q |
124 |
nnncactttaaagacagaacagaagcttataaaagcacaccctattggcttcacacattcattgaaatcacatgcatcattgctttcttatatgcagcta |
223 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |
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| T |
7617628 |
t--cactttaaagacagaacagaagcttataaaagcacaccctattggcttcacacattcattgaaatcacatgcatcattgatttcttatatgcaacta |
7617725 |
T |
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| Q |
224 |
cacataacaattacca |
239 |
Q |
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|||||||||||||||| |
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| T |
7617726 |
cacataacaattacca |
7617741 |
T |
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