View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10261A_low_226 (Length: 253)
Name: NF10261A_low_226
Description: NF10261A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10261A_low_226 |
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Alignment Details
Target: chr2 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 9443549 - 9443303
Alignment:
| Q |
1 |
aatataatttgaatgaattggttataaaaaattaatcatggctacatcagtgtttgttcgtatgtttcccaactctctgatttccggcttcgcaaaaatc |
100 |
Q |
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| T |
9443549 |
aatatagtttgaatgaattggttataaaaacttaatcatggctacatcagtgtttgttcgtatgtttcccaactctctgatttccggcttcgcaaaaatc |
9443450 |
T |
|
| Q |
101 |
atggtagtataccaggttaacaaacatgcgctaaaactaaacgataaatttaagaataaaaatcaatggtagagacaaaaaccataagttctagtttcga |
200 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
9443449 |
atggtagtataccaggtttacaaacatgcgctaaaactaaaccataaatttaagaataaaaatcaatggtagagacaaaaactataagttctagtttcga |
9443350 |
T |
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| Q |
201 |
gttagaatcaactttggatgcaattttccataaaatcacatatctta |
247 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
9443349 |
gttagaatcaactttggaagcaattttccataaaatcacatatctta |
9443303 |
T |
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