View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10261A_low_271 (Length: 248)
Name: NF10261A_low_271
Description: NF10261A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10261A_low_271 |
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Alignment Details
Target: chr6 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 33026039 - 33025807
Alignment:
| Q |
1 |
aattgattagaatgtgttgatctatttccatcattcacatgtgcatcaattttacttctttcatgtttctcctcttgtcttctcttcgatcgacccatac |
100 |
Q |
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| T |
33026039 |
aattgattagaatgtgttgatctatttccatcattcacatgtgcatcaattttacttctttcatgtttctcctcttgtcttctcttcgatcgactcatac |
33025940 |
T |
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| Q |
101 |
tattcgaagcttcctgcacctttcgaagcatctctagagactcttgcaaatcaagagcaccttttaacaaatcctttgcgatatcatcggattttccatc |
200 |
Q |
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||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33025939 |
tattcgaagcttcttgcacctgtcgaagcatctctagagactcttgcaaatcaagagcaccttttaacaaatcctttgcgatatcatcggattttccatc |
33025840 |
T |
|
| Q |
201 |
gtacctcacacctctagaccacgacccaatcat |
233 |
Q |
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||||||||||||||||||||||||| ||||||| |
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| T |
33025839 |
gtacctcacacctctagaccacgactcaatcat |
33025807 |
T |
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