View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10261A_low_314 (Length: 242)
Name: NF10261A_low_314
Description: NF10261A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10261A_low_314 |
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Alignment Details
Target: chr5 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 7725175 - 7725397
Alignment:
| Q |
1 |
gaattaaattatttgctaggttatttaccccatttccaaaaagacacaaataccttcctttgtaagcccaaatccgttcatccgccttttcactccttta |
100 |
Q |
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| T |
7725175 |
gaattaaattatttgctaggttatttaccccatttccaaaaagacacaaataccttcctttgtaagcccaaatccgttcatcctccttttcactccttca |
7725274 |
T |
|
| Q |
101 |
aaaacgccaactcattgtagaagcaaacagagcacctgtcaaattcaaatggtgacacaggattaaacaattatagtttttgcgatcgattccatctaat |
200 |
Q |
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| T |
7725275 |
aaaactccaactcattgtagaagcaaacagagcacctgtcaaattcaaatggtgacacaggattaaacaattatagtttttgcgatcgattcaatctaat |
7725374 |
T |
|
| Q |
201 |
acctaaaattgggtgaatcaaat |
223 |
Q |
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|||||| ||||||||||||||| |
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| T |
7725375 |
acctaagtttgggtgaatcaaat |
7725397 |
T |
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