View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10261A_low_355 (Length: 231)
Name: NF10261A_low_355
Description: NF10261A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10261A_low_355 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 22 - 208
Target Start/End: Complemental strand, 40225582 - 40225396
Alignment:
| Q |
22 |
tatacccttatcctttcatctctgttcccttcttccattacaaaaattcattgaagcttggttaagaaatagctttgtcttttcaccatcattctctcat |
121 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40225582 |
tatacccttatcctttcatctctgttcccttcttccattacaaaaattcattgaagcttggttaagaaatagctttgtcttttcaccatcattctctcat |
40225483 |
T |
|
| Q |
122 |
taaactcaaaccttacgttacgcccacgttcttggtcaatttttgtaagtaattttttcctccacttatatatttggtgctatagct |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40225482 |
taaactcaaaccttacgttacgcccacgttcttggtcaatttttgtaagtaattttttcctccacttatatatttggtgctatagct |
40225396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University