View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10261A_low_358 (Length: 230)
Name: NF10261A_low_358
Description: NF10261A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10261A_low_358 |
 | |
|
| [»] chr3 (1 HSPs) |
| |
|
| [»] chr7 (7 HSPs) |
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|
Alignment Details
Target: chr3 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 36498913 - 36499142
Alignment:
| Q |
1 |
ttttgtacatgatctctctcctggtcgtgataaattgtctgctcgggctgtcaaatgtgtgtttttgggatattctaaaacccaaaaggggtatcgttgt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
36498913 |
ttttgtacatgatctctctcctggtcgtgataaattgtctgctcgggctgtcaaatgtgtgtttttgggatattctaaaacccaaaaggggtatcgttgt |
36499012 |
T |
|
| Q |
101 |
tattctccatccgcacatcatttttatgtttcagcagacgttactttctttgaggatagaccattctttgcttcacccactacatctggttctacaactt |
200 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36499013 |
tattctccatccgcacatcgtttttatgtttcagcagacgttactttctttgaggatagaccattctttgcttcacccactacatctggttctacaactt |
36499112 |
T |
|
| Q |
201 |
ctacaactgatgttactacatcccaggtga |
230 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
36499113 |
ctacaactgatgttactacatcccaggtga |
36499142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 194; Significance: 1e-105; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 45184357 - 45184128
Alignment:
| Q |
1 |
ttttgtacatgatctctctcctggtcgtgataaattgtctgctcgggctgtcaaatgtgtgtttttgggatattctaaaacccaaaaggggtatcgttgt |
100 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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|
| T |
45184357 |
ttttgcacatgatctctctcctggtcgtgataaattgtctgctcgagctgtcaaatgtgtgtttatgggatattctaaaacccaaaaggggtatcgttgt |
45184258 |
T |
|
| Q |
101 |
tattctccatccgcacatcatttttatgtttcagcagacgttactttctttgaggatagaccattctttgcttcacccactacatctggttctacaactt |
200 |
Q |
| |
|
||||||||||| ||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
45184257 |
tattctccatctgcacatcgtttttatgtttcagcaaatgttactttctttgaggatagaccattctttgcttcacccactacatctggttctgcaactt |
45184158 |
T |
|
| Q |
201 |
ctacaactgatgttactacatcccaggtga |
230 |
Q |
| |
|
||||||||||||||||||| |||||||||| |
|
|
| T |
45184157 |
ctacaactgatgttactacttcccaggtga |
45184128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 42359235 - 42359028
Alignment:
| Q |
1 |
ttttgtacatgatctctctcctggtcgtgataaattgtctgctcgggctgtcaaatgtgtgtttttgggatattctaaaacccaaaaggggtatcgttgt |
100 |
Q |
| |
|
||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
42359235 |
ttttgcacatgatctctctcctgaccgtgataaattgtctgctcgagctgtcaaatgtgtgtttttgggatattctaaaacccaaaaggggtatcgttgt |
42359136 |
T |
|
| Q |
101 |
tattctccatccgcacatcatttttatgtttcagcagacgttactttctttgaggatagaccattctttgcttcacccactacatctggttctacaactt |
200 |
Q |
| |
|
||||||||||| ||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
42359135 |
tattctccatctgcacatcgtttttatgtttcaaaagatgttactttctttgaggatagaccattctttgcttcacccactacatctggttctacaactt |
42359036 |
T |
|
| Q |
201 |
ctacaact |
208 |
Q |
| |
|
|||||||| |
|
|
| T |
42359035 |
ctacaact |
42359028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 6998906 - 6999103
Alignment:
| Q |
1 |
ttttgtacatgatctctctcctggtcgtgataaattgtctgctcgggctgtcaaatgtgtgtttttgggatattctaaaacccaaaaggggtatcgttgt |
100 |
Q |
| |
|
|||||| ||||||||| |||||||| | |||||||||||||| || |||||||||||||| |||||||| |||| || |||||||||||| ||||| ||| |
|
|
| T |
6998906 |
ttttgttcatgatctcactcctggttgcgataaattgtctgcacgagctgtcaaatgtgtttttttgggctattttagaacccaaaagggttatcgatgt |
6999005 |
T |
|
| Q |
101 |
tattctccatccgcacatcatttttatgtttcagcagacgttactttctttgaggatagaccattctttgcttcacccactacatctggttctacaac |
198 |
Q |
| |
|
||||||||||| |||||| |||||| |||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||| || |||||||||| |
|
|
| T |
6999006 |
tattctccatctacacatcgcttttatatttcagcagatgttactttctttgaggatataccattctttgcttcacacactacaactagttctacaac |
6999103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 7927413 - 7927610
Alignment:
| Q |
1 |
ttttgtacatgatctctctcctggtcgtgataaattgtctgctcgggctgtcaaatgtgtgtttttgggatattctaaaacccaaaaggggtatcgttgt |
100 |
Q |
| |
|
|||||| ||||||||| ||||| |||| |||||||||||||| || ||||||||||||||||||||||| ||||||| |||||||||||||||| | ||| |
|
|
| T |
7927413 |
ttttgttcatgatctcactcctagtcgcgataaattgtctgcacgagctgtcaaatgtgtgtttttgggctattctagaacccaaaaggggtatgggtgt |
7927512 |
T |
|
| Q |
101 |
tattctccatccgcacatcatttttatgtttcagcagacgttactttctttgaggatagaccattctttgcttcacccactacatctggttctacaac |
198 |
Q |
| |
|
||||||||||| ||| || |||||| || ||||||| ||||||||||| |||||| || ||||||||||||||||||||||||| |||||||||| |
|
|
| T |
7927513 |
tattctccatctacacgtcggttttatattccagcagatgttactttcttcaaggatacactattctttgcttcacccactacatcttgttctacaac |
7927610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 44265276 - 44265079
Alignment:
| Q |
1 |
ttttgtacatgatctctctcctggtcgtgataaattgtctgctcgggctgtcaaatgtgtgtttttgggatattctaaaacccaaaaggggtatcgttgt |
100 |
Q |
| |
|
|||||| ||||||||| |||||||||| |||||||||||||| || | |||||||||| |||||||||| ||||||| |||||||||| ||||||| ||| |
|
|
| T |
44265276 |
ttttgttcatgatctcactcctggtcgcgataaattgtctgcacgagttgtcaaatgtatgtttttgggctattctagaacccaaaagaggtatcggtgt |
44265177 |
T |
|
| Q |
101 |
tattctccatccgcacatcatttttatgtttcagcagacgttactttctttgaggatagaccattctttgcttcacccactacatctggttctacaac |
198 |
Q |
| |
|
||||||||||| ||| || ||||| |||||||||| ||||||||||| ||| ||| |||||||||||||||||||||||||||| ||| |||||| |
|
|
| T |
44265176 |
tattctccatctacacgtcgcttttacatttcagcagatgttactttcttcgagaatacaccattctttgcttcacccactacatctagttttacaac |
44265079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 47 - 198
Target Start/End: Complemental strand, 40544647 - 40544496
Alignment:
| Q |
47 |
gctgtcaaatgtgtgtttttgggatattctaaaacccaaaaggggtatcgttgttattctccatccgcacatcatttttatgtttcagcagacgttactt |
146 |
Q |
| |
|
||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||| ||| || |||||| |||||||||| ||||||| |
|
|
| T |
40544647 |
gctgtcaaatgtgtgtttttgggctattctagaacccaaaaggggtatcggtgttattctccatctacacgtcgcttttatatttcagcagatgttactt |
40544548 |
T |
|
| Q |
147 |
tctttgaggatagaccattctttgcttcacccactacatctggttctacaac |
198 |
Q |
| |
|
|||| ||||||| |||||||||||||||||| |||||| || |||||||||| |
|
|
| T |
40544547 |
tcttcgaggatacaccattctttgcttcacctactacaactagttctacaac |
40544496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 40544778 - 40544668
Alignment:
| Q |
1 |
ttttgtacatgatctctctcctggtcgtgataaattgtctgctcgggctgtcaaatgtgtgtttttgggatattctaaaacccaaaaggggtatcgttgt |
100 |
Q |
| |
|
|||||| ||||||||| ||||| |||| |||||||||||||| || ||||||||||||||||||||||| ||||||| |||||||||||||||||| ||| |
|
|
| T |
40544778 |
ttttgttcatgatctcactcctagtcgcgataaattgtctgcacgagctgtcaaatgtgtgtttttgggctattctagaacccaaaaggggtatcggtgt |
40544679 |
T |
|
| Q |
101 |
tattctccatc |
111 |
Q |
| |
|
||||||||||| |
|
|
| T |
40544678 |
tattctccatc |
40544668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 145; Significance: 2e-76; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 27 - 199
Target Start/End: Original strand, 37075213 - 37075385
Alignment:
| Q |
27 |
gtgataaattgtctgctcgggctgtcaaatgtgtgtttttgggatattctaaaacccaaaaggggtatcgttgttattctccatccgcacatcattttta |
126 |
Q |
| |
|
|||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||| |
|
|
| T |
37075213 |
gtgataaattgtctgcgcgagctgtcaaatgtgtgtttttgggatattctaaaacccaaaaggggtatcgttgttattttccatctgcacatcgttttta |
37075312 |
T |
|
| Q |
127 |
tgtttcagcagacgttactttctttgaggatagaccattctttgcttcacccactacatctggttctacaact |
199 |
Q |
| |
|
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37075313 |
tgtttcagcatatgttactttctttgaggatagaccattctttgcttcacccactacatctggttctacaact |
37075385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 50960871 - 50961069
Alignment:
| Q |
1 |
ttttgtacatgatctctctcctggtcgtgataaattgtctgctcgggctgtcaaatgtgtgtttttgggatattctaaaacccaaaaggggtatcgttgt |
100 |
Q |
| |
|
|||||| ||||||||| ||||| ||| |||||||||| ||| || ||||||||||||||||||||||| ||||||| |||||||||||||||| | ||| |
|
|
| T |
50960871 |
ttttgttcatgatctcactcctagtcacgataaattgtatgcacgagctgtcaaatgtgtgtttttgggctattctagaacccaaaaggggtattggtgt |
50960970 |
T |
|
| Q |
101 |
tattctccatccgcacatcatttttatgtttcagcagacgttactttctttgaggatagaccattctttgcttcacccactacatctggttctacaact |
199 |
Q |
| |
|
||||||||||| |||||| |||||| |||||||| | ||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
50960971 |
tattctccatctacacatcggttttatatttcagcaaatgttactttcttcgaggatacaccattctttgcttcacccactacatctagttctacaact |
50961069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 22504633 - 22504436
Alignment:
| Q |
1 |
ttttgtacatgatctctctcctggtcgtgataaattgtctgctcgggctgtcaaatgtgtgtttttgggatattctaaaacccaaaaggggtatcgttgt |
100 |
Q |
| |
|
|||||| ||||||||| ||||| |||| |||||||||||||| || | ||||||||||||||||||||| ||||||| |||||||||||||||||| ||| |
|
|
| T |
22504633 |
ttttgttcatgatctcactccttgtcgcgataaattgtctgcacgagttgtcaaatgtgtgtttttgggctattctagaacccaaaaggggtatcggtgt |
22504534 |
T |
|
| Q |
101 |
tattctccatccgcacatcatttttatgtttcagcagacgttactttctttgaggatagaccattctttgcttcacccactacatctggttctacaac |
198 |
Q |
| |
|
||||||||||| || || |||||| |||||||||| ||||||||||| ||||||| ||||||||||| ||||| ||||||| || |||||||||| |
|
|
| T |
22504533 |
tattctccatctacatgtcgcttttatatttcagcagatgttactttcttcgaggatacaccattctttgtttcactcactacaactagttctacaac |
22504436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 46595687 - 46595516
Alignment:
| Q |
1 |
ttttgtacatgatctctctcctggtcgtgataaattgtctgctcgggctgtcaaatgtgtgtttttgggatattctaaaacccaaaaggggtatcgttgt |
100 |
Q |
| |
|
|||||| ||||||||| |||||||||| |||||||||||||| || ||||||||||||||||||||||| ||||||| |||||||||||||||||| ||| |
|
|
| T |
46595687 |
ttttgttcatgatctcactcctggtcgcgataaattgtctgcacgagctgtcaaatgtgtgtttttgggctattctagaacccaaaaggggtatcggtgt |
46595588 |
T |
|
| Q |
101 |
tattctccatccgcacatcatttttatgtttcagcagacgttactttctttgaggatagaccattctttgct |
172 |
Q |
| |
|
||||||||||| || | |||||| |||||||||| ||||||||||| ||||||| ||||||||||||| |
|
|
| T |
46595587 |
tattctccatctacatgttgcttttatatttcagcagatgttactttcttcgaggatacaccattctttgct |
46595516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 8 - 184
Target Start/End: Complemental strand, 37918792 - 37918616
Alignment:
| Q |
8 |
catgatctctctcctggtcgtgataaattgtctgctcgggctgtcaaatgtgtgtttttgggatattctaaaacccaaaaggggtatcgttgttattctc |
107 |
Q |
| |
|
|||||||| ||||||||||||||||| |||||| | |||||||||| || ||||||||||| || || ||| ||||| |||||||| ||||||| || |
|
|
| T |
37918792 |
catgatctttctcctggtcgtgataagttgtctccatgggctgtcaagtgcgtgtttttggggtactccaaagttcaaaaagggtatcggtgttattgtc |
37918693 |
T |
|
| Q |
108 |
catccgcacatcatttttatgtttcagcagacgttactttctttgaggatagaccattctttgcttcacccactaca |
184 |
Q |
| |
|
|||| |||||| ||||||||| || ||||| ||||||||||||||||||| ||| |||||||| |||| |||||| |
|
|
| T |
37918692 |
catctacacatcgtttttatgtctctgcagatgttactttctttgaggatacacctttctttgccacaccaactaca |
37918616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 33832980 - 33833148
Alignment:
| Q |
1 |
ttttgtacatgatctctctcctggtcgtgataaattgtctgctcgggctgtcaaatgtgtgtttttgggatattctaaaacccaaaaggggtatcgttgt |
100 |
Q |
| |
|
|||||| |||||||| ||||||||||||||||| |||||| | ||||||||||| || ||||||||||| || || ||| || || ||| |||| ||| |
|
|
| T |
33832980 |
ttttgttcatgatctttctcctggtcgtgataagttgtctccacgggctgtcaagtgcgtgtttttggggtactccaaagttcataaagggcatcggtgt |
33833079 |
T |
|
| Q |
101 |
tattctccatccgcacatcatttttatgtttcagcagacgttactttctttgaggatagaccattcttt |
169 |
Q |
| |
|
|||| |||||| |||||| ||||||||| || ||||| ||||||||| ||||| ||| ||| |||||| |
|
|
| T |
33833080 |
tattgtccatctacacatcgtttttatgtctctgcagatgttactttccttgagaatacacctttcttt |
33833148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 37075151 - 37075190
Alignment:
| Q |
1 |
ttttgtacatgatctctctcctggtcgtgataaattgtct |
40 |
Q |
| |
|
||||| |||||||||||||||||| ||||||||||||||| |
|
|
| T |
37075151 |
ttttgcacatgatctctctcctggccgtgataaattgtct |
37075190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 127; Significance: 1e-65; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 32665131 - 32664933
Alignment:
| Q |
1 |
ttttgtacatgatctctctcctggtcgtgataaattgtctgctcgggctgtcaaatgtgtgtttttgggatattctaaaacccaaaaggggtatcgttgt |
100 |
Q |
| |
|
|||||||||||||||||||||||| || |||||||||| || || ||||||| |||||||||| |||| ||||||||| |||||||||||||||||||| |
|
|
| T |
32665131 |
ttttgtacatgatctctctcctggccgcgataaattgtttgttctagctgtcagatgtgtgtttgtgggctattctaaagcccaaaaggggtatcgttgt |
32665032 |
T |
|
| Q |
101 |
tattctccatccgcacatcatttttatgtttcagcagacgttactttctttgaggatagaccattctttgcttcacccactacatctggttctacaact |
199 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||| ||||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
32665031 |
tattctccatctgcacatcatttttatgtttcagcaacagttactttctttcaggatagaacattctttgtttcactcactacatctggttctacaact |
32664933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 38504426 - 38504623
Alignment:
| Q |
1 |
ttttgtacatgatctctctcctggtcgtgataaattgtctgctcgggctgtcaaatgtgtgtttttgggatattctaaaacccaaaaggggtatcgttgt |
100 |
Q |
| |
|
|||||| ||||||||| |||||||||| |||||||||||||| || ||||||||||||||||||||||| ||||||| |||||||||||||||||| ||| |
|
|
| T |
38504426 |
ttttgttcatgatctcactcctggtcgcgataaattgtctgcacgagctgtcaaatgtgtgtttttgggctattctagaacccaaaaggggtatcggtgt |
38504525 |
T |
|
| Q |
101 |
tattctccatccgcacatcatttttatgtttcagcagacgttactttctttgaggatagaccattctttgcttcacccactacatctggttctacaac |
198 |
Q |
| |
|
||||||||||| ||| || |||||| |||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||| || |||||||||| |
|
|
| T |
38504526 |
tattctccatctacacgtcgcttttatatttcagcagatgttactttcttcgaggatacaccattctttgcttcacccactacaactagttctacaac |
38504623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 34770231 - 34770034
Alignment:
| Q |
1 |
ttttgtacatgatctctctcctggtcgtgataaattgtctgctcgggctgtcaaatgtgtgtttttgggatattctaaaacccaaaaggggtatcgttgt |
100 |
Q |
| |
|
|||||| ||||||||| |||||||||| |||||||||| ||| || || |||||||||||||||||||| ||||||| |||||||||||||||||| ||| |
|
|
| T |
34770231 |
ttttgttcatgatctcactcctggtcgcgataaattgtttgcacgagcggtcaaatgtgtgtttttgggctattctagaacccaaaaggggtatcggtgt |
34770132 |
T |
|
| Q |
101 |
tattctccatccgcacatcatttttatgtttcagcagacgttactttctttgaggatagaccattctttgcttcacccactacatctggttctacaac |
198 |
Q |
| |
|
||||||||||| || || |||||| |||||||| | ||||||||||| ||||||| |||||||||||||||||| |||||| || |||||||||| |
|
|
| T |
34770131 |
tattctccatctaaacgtcgcttttatatttcagcatatgttactttcttcgaggatacaccattctttgcttcaccaactacaactagttctacaac |
34770034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 43735110 - 43735307
Alignment:
| Q |
1 |
ttttgtacatgatctctctcctggtcgtgataaattgtctgctcgggctgtcaaatgtgtgtttttgggatattctaaaacccaaaaggggtatcgttgt |
100 |
Q |
| |
|
|||||| ||||||||| |||||||||| |||||||||||||| || ||||||||||||||||||||||| ||||||| |||||||||||||||||| ||| |
|
|
| T |
43735110 |
ttttgttcatgatctcactcctggtcgcgataaattgtctgcacgagctgtcaaatgtgtgtttttgggctattctagaacccaaaaggggtatcggtgt |
43735209 |
T |
|
| Q |
101 |
tattctccatccgcacatcatttttatgtttcagcagacgttactttctttgaggatagaccattctttgcttcacccactacatctggttctacaac |
198 |
Q |
| |
|
||||||||||| ||| || |||||| |||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||| || |||||||||| |
|
|
| T |
43735210 |
tattctccatctacacgtcgcttttatatttcagcagatgttactttcttcgaggatacaccattctttgcttcacccactacaactagttctacaac |
43735307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 36999036 - 36999204
Alignment:
| Q |
1 |
ttttgtacatgatctctctcctggtcgtgataaattgtctgctcgggctgtcaaatgtgtgtttttgggatattctaaaacccaaaaggggtatcgttgt |
100 |
Q |
| |
|
|||||| |||||||| |||||||||||||||||||||||| | ||||||||||| |||||||||| ||| || || | | ||||| ||||| || ||| |
|
|
| T |
36999036 |
ttttgttcatgatctttctcctggtcgtgataaattgtctccacgggctgtcaagtgtgtgttttgggggtactccagagttcaaaaagggtaccggtgt |
36999135 |
T |
|
| Q |
101 |
tattctccatccgcacatcatttttatgtttcagcagacgttactttctttgaggatagaccattcttt |
169 |
Q |
| |
|
|||| |||||| |||||| ||||||||||| ||||| ||||||||||||||||||| ||| |||||| |
|
|
| T |
36999136 |
tattgtccatctacacatcgtttttatgtttatgcagatgttactttctttgaggatacacctttcttt |
36999204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 9 - 198
Target Start/End: Original strand, 19744 - 19931
Alignment:
| Q |
9 |
atgatctctctcctggtcgtgataaattgtctgctcgggctgtcaaatgtgtgtttttgggatattctaaaacccaaaaggggtatcgttgttattctcc |
108 |
Q |
| |
|
|||||||| |||||||||| ||||||||||||| | ||||||||||||| |||||||| ||| ||| ||||| ||||||||||| ||||||||||| |
|
|
| T |
19744 |
atgatctcactcctggtcgcgataaattgtctgtaagagctgtcaaatgtg--tttttgggctatgctagaaccctaaaggggtatcagtgttattctcc |
19841 |
T |
|
| Q |
109 |
atccgcacatcatttttatgtttcagcagacgttactttctttgaggatagaccattctttgcttcacccactacatctggttctacaac |
198 |
Q |
| |
|
||| ||| || |||||| |||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||| || |||||||||| |
|
|
| T |
19842 |
atctacacgtcgcttttatatttcagcagatgttactttcttcgaggatacaccattctttgcttcacccactacaactagttctacaac |
19931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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