View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10261A_low_370 (Length: 230)
Name: NF10261A_low_370
Description: NF10261A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10261A_low_370 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 9545471 - 9545242
Alignment:
| Q |
1 |
gtgatttgttcagataaaaccggtacactgactacaaatcaaatgtctgcgacggagttctttactttgggagggaaaacaactgcttgtagagtcatta |
100 |
Q |
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| T |
9545471 |
gtgatttgttcagataaaaccggtacactgactacaaatcaaatgtctgcgacggagttctttactttgggagggaaaacaactgcttgtagagtcatta |
9545372 |
T |
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| Q |
101 |
gtgttgaagggacaacatatgatccaaaagatggagggattgttgattggacttgctataacatggatgctaacttgttagccatggcggaaatttgtgc |
200 |
Q |
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| T |
9545371 |
gtgttgaagggacaacatatgatccaaaagatggagggattgttgattggacttgctataacatggatgctaacttgttagccatggcggaaatttgtgc |
9545272 |
T |
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| Q |
201 |
tgtttgtaatgatgccggtgtttattttga |
230 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
9545271 |
tgtttgtaatgatgccggtgtttattttga |
9545242 |
T |
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