View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10261A_low_389 (Length: 229)
Name: NF10261A_low_389
Description: NF10261A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10261A_low_389 |
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Alignment Details
Target: chr4 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 8 - 216
Target Start/End: Complemental strand, 3889210 - 3889002
Alignment:
| Q |
8 |
gatggacatcaattctccataagctgcttcctgctcagtcccaccaaaagatatgggtactgatcctttgagcacaatcatcacatactgcaaaccaaga |
107 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3889210 |
gatggacaccaattctccataagctgcttcctgctcagtcccaccaaaagatatgggtactgatcctttgagcacaatcatcacatactgcaaaccaaga |
3889111 |
T |
|
| Q |
108 |
aaggccagataatcattgattttaaacacactgaatatgtcaaaactataacatattacggcaaatcaaagtatagaataaaagagaaaattaaactacc |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3889110 |
aaggccagataatcattgattttaaacacactgaatatgtcaaaactataacatattacggcaaatcaaagtatagaataaaagagaaaattaaactacc |
3889011 |
T |
|
| Q |
208 |
aacaccaaa |
216 |
Q |
| |
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||||||||| |
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| T |
3889010 |
aacaccaaa |
3889002 |
T |
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