View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10261A_low_404 (Length: 227)
Name: NF10261A_low_404
Description: NF10261A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10261A_low_404 |
 | |
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| [»] scaffold0482 (1 HSPs) |
| |
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| [»] chr8 (12 HSPs) |
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| [»] chr5 (13 HSPs) |
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| [»] chr4 (8 HSPs) |
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| [»] scaffold0028 (2 HSPs) |
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| [»] chr7 (5 HSPs) |
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| [»] chr3 (9 HSPs) |
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| [»] chr6 (2 HSPs) |
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| [»] scaffold0040 (2 HSPs) |
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| [»] chr2 (4 HSPs) |
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| [»] scaffold0233 (1 HSPs) |
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| [»] scaffold0001 (1 HSPs) |
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| [»] chr1 (2 HSPs) |
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| [»] scaffold0010 (1 HSPs) |
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Alignment Details
Target: scaffold0482 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: scaffold0482
Description:
Target: scaffold0482; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 3301 - 3527
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctgtcttactatatctcttggatcatctctcttgaatttgcctcttgta |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3301 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcctcttgta |
3400 |
T |
|
| Q |
101 |
aaactcaaacaaagatttgagtatttattcgatccaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgag |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3401 |
aaactcaaacaaagatttgagtatttattcgatccaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgag |
3500 |
T |
|
| Q |
201 |
atagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||||||||| |||||||||||||||| |
|
|
| T |
3501 |
atagaaaattccaacctttcttttgct |
3527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 12)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 7789498 - 7789272
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctgtcttactatatctcttggatcatctctcttgaatttgcctcttgta |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7789498 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcctcttgta |
7789399 |
T |
|
| Q |
101 |
aaactcaaacaaagatttgagtatttattcgatccaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgag |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7789398 |
aaactcaaacaaagatttgagtatttattcgatccaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgag |
7789299 |
T |
|
| Q |
201 |
atagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||||||||| |||||||||||||||| |
|
|
| T |
7789298 |
atagaaaattccaacctttcttttgct |
7789272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 20713838 - 20714063
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctgtcttactatatctcttggatcatctctcttgaatttgcctcttgta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| || |||||| |||||||||||| ||| ||||||||||||||||| ||||| | |||||||| | ||||| |
|
|
| T |
20713838 |
tgaaaatcatcactacaaacaaagctcttcgcaaacaaagaaaattccaagctctctcactatatctcttggatcttctctttcgaatttgc-tattgta |
20713936 |
T |
|
| Q |
101 |
aaactcaaacaaagatttgagtatttattcgatccaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgag |
200 |
Q |
| |
|
|| |||||||||||| ||||||||||||| |||||||||||||||| ||||| |||| ||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
20713937 |
aatctcaaacaaagaattgagtatttatttgatccaaacaaatctcctcataaaaagtgtgttgtatttctcaaagtatattgggcttaatagttttgag |
20714036 |
T |
|
| Q |
201 |
atagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||||||||| |||||||||||||||| |
|
|
| T |
20714037 |
atagaaaattccaacctttcttttgct |
20714063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 18143673 - 18143621
Alignment:
| Q |
174 |
aagtctattgggcttaatagttttgagatagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
18143673 |
aagtctattgggcttaatagttt-gagatagaaaattccaacctttcttttgct |
18143621 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 4843968 - 4843916
Alignment:
| Q |
174 |
aagtctattgggcttaatagttttgagatagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
4843968 |
aagtctattggccttaatagttt-gagatagaaaattccaacctttcttttgct |
4843916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 18232870 - 18232922
Alignment:
| Q |
174 |
aagtctattgggcttaatagttttgagatagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
18232870 |
aagtctattgggctgaatagttt-gagatagaaaattccaacctttcttttgct |
18232922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 18242321 - 18242373
Alignment:
| Q |
174 |
aagtctattgggcttaatagttttgagatagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
18242321 |
aagtctattgggctgaatagttt-gagatagaaaattccaacctttcttttgct |
18242373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 18251772 - 18251824
Alignment:
| Q |
174 |
aagtctattgggcttaatagttttgagatagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
18251772 |
aagtctattgggctgaatagttt-gagatagaaaattccaacctttcttttgct |
18251824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 18883404 - 18883352
Alignment:
| Q |
174 |
aagtctattgggcttaatagttttgagatagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
18883404 |
aagtctattgggctgaatagttt-gagatagaaaattccaacctttcttttgct |
18883352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 25037270 - 25037218
Alignment:
| Q |
174 |
aagtctattgggcttaatagttttgagatagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||| |||||||||||||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
25037270 |
aagtatattgggcttaatagttt-gagatagaaaattccaacctttcttttgct |
25037218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 25051307 - 25051255
Alignment:
| Q |
174 |
aagtctattgggcttaatagttttgagatagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||| |||||||||||||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
25051307 |
aagtatattgggcttaatagttt-gagatagaaaattccaacctttcttttgct |
25051255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 15833723 - 15833798
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctgtcttactatatctcttggatcat |
77 |
Q |
| |
|
||||||||||||||||| ||||||||| ||||| ||||| |||||| ||||| ||| | ||||||| ||||||||| |
|
|
| T |
15833723 |
tgaaaatcatcactacatacaaagctcctcacaaacaaa-caaattgcaagccctctcattatatcttttggatcat |
15833798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 15827411 - 15827476
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctgtcttactatatct |
67 |
Q |
| |
|
||||||||||||||||| |||||| | |||||| ||||| ||||||||||||| ||| | ||||||| |
|
|
| T |
15827411 |
tgaaaatcatcactacatacaaagtttttcacaaacaaa-caaattccaagctatctcattatatct |
15827476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 211; Significance: 1e-116; HSPs: 13)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 24412596 - 24412822
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctgtcttactatatctcttggatcatctctcttgaatttgcctcttgta |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24412596 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctctctcactgtatctcttggatcatctctcttgaatttgcctcttgta |
24412695 |
T |
|
| Q |
101 |
aaactcaaacaaagatttgagtatttattcgatccaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgag |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24412696 |
aaactcaaacaaagatttgagtatttattcgatccaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgag |
24412795 |
T |
|
| Q |
201 |
atagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||||||||| |||||||||||||||| |
|
|
| T |
24412796 |
atagaaaattccaacctttcttttgct |
24412822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 24422045 - 24422271
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctgtcttactatatctcttggatcatctctcttgaatttgcctcttgta |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24422045 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctctctcactgtatctcttggatcatctctcttgaatttgcctcttgta |
24422144 |
T |
|
| Q |
101 |
aaactcaaacaaagatttgagtatttattcgatccaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgag |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24422145 |
aaactcaaacaaagatttgagtatttattcgatccaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgag |
24422244 |
T |
|
| Q |
201 |
atagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||||||||| |||||||||||||||| |
|
|
| T |
24422245 |
atagaaaattccaacctttcttttgct |
24422271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 30445249 - 30445023
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctgtcttactatatctcttggatcatctctcttgaatttgcctcttgta |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30445249 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcctcttgta |
30445150 |
T |
|
| Q |
101 |
aaactcaaacaaagatttgagtatttattcgatccaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgag |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30445149 |
aaactcaaacaaagatttgagtatttattctatccaaacaaatctcttcatacaaagtgtgttgtatttctcaaagtctattgggcttaatagttttgag |
30445050 |
T |
|
| Q |
201 |
atagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||||||||| |||||||||||||||| |
|
|
| T |
30445049 |
atagaaaattccaacctttcttttgct |
30445023 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 30454621 - 30454395
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctgtcttactatatctcttggatcatctctcttgaatttgcctcttgta |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30454621 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcctcttgta |
30454522 |
T |
|
| Q |
101 |
aaactcaaacaaagatttgagtatttattcgatccaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgag |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30454521 |
aaactcaaacaaagatttgagtatttattctatccaaacaaatctcttcatacaaagtgtgttgtatttctcaaagtctattgggcttaatagttttgag |
30454422 |
T |
|
| Q |
201 |
atagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||||||||| |||||||||||||||| |
|
|
| T |
30454421 |
atagaaaattccaacctttcttttgct |
30454395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 30459679 - 30459453
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctgtcttactatatctcttggatcatctctcttgaatttgcctcttgta |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30459679 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcctcttgta |
30459580 |
T |
|
| Q |
101 |
aaactcaaacaaagatttgagtatttattcgatccaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgag |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30459579 |
aaactcaaacaaagatttgagtatttattctatccaaacaaatctcttcatacaaagtgtgttgtatttctcaaagtctattgggcttaatagttttgag |
30459480 |
T |
|
| Q |
201 |
atagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||||||||| |||||||||||||||| |
|
|
| T |
30459479 |
atagaaaattccaacctttcttttgct |
30459453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 18568806 - 18569033
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctgtcttactatatctcttggatcatctctcttgaatttgcctcttgta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18568806 |
tgaaaatcatcactacaaacaaagctcttcgcatacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcctcttgta |
18568905 |
T |
|
| Q |
101 |
aaactcaaacaaagatttgagtatttattcgatccaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatag-ttttga |
199 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
18568906 |
aaactcaaacaaagatttgagtatttattcgatccaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagtttttga |
18569005 |
T |
|
| Q |
200 |
gatagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
||||||||||| |||||||||||||||| |
|
|
| T |
18569006 |
gatagaaaattccaacctttcttttgct |
18569033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 22488954 - 22489179
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctgtcttactatatctcttggatcatctctcttgaatttgcctcttgta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| || ||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||| | ||||| |
|
|
| T |
22488954 |
tgaaaatcatcactacaaacaaagctcttcgcaaacaaagcaaattccaagctctctcactatatctcttggatcttctctcttgaatttgc-tattgta |
22489052 |
T |
|
| Q |
101 |
aaactcaaacaaagatttgagtatttattcgatccaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgag |
200 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22489053 |
aaactcaaacaaagatttgagtatttatttgatccaaacaaatctcatcatacaaagtgtgttgtatttctcaaagtctattgggcttaatagttttgag |
22489152 |
T |
|
| Q |
201 |
atagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||||||||| |||||||||||||||| |
|
|
| T |
22489153 |
atagaaaattccaacctttcttttgct |
22489179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 35 - 227
Target Start/End: Original strand, 4635748 - 4635939
Alignment:
| Q |
35 |
acaaagcaaattccaagctgtcttactatatctcttggatcatctctcttgaatttgcctcttgtaaaactcaaacaaagatttgagtatttattcgatc |
134 |
Q |
| |
|
||||||||||||||||||| || ||||||||||||||||| ||||| | |||||||| | |||||||||||||||||||| || |||||||||| |||| |
|
|
| T |
4635748 |
acaaagcaaattccaagctccctcactatatctcttggatcttctctttcgaatttgc-tattgtaaaactcaaacaaagaattaagtatttatttgatc |
4635846 |
T |
|
| Q |
135 |
caaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgagatagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |
|
|
| T |
4635847 |
caaacaaatctcatcatacaaagtgtgttgtatttctcaaagtctattgggcttaatagttttgagatagaaaattccaacatttcttttgct |
4635939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 22118515 - 22118443
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctgtcttactatatctcttggatc |
75 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| ||||| |||||||||||| ||| | ||||||||||||||| |
|
|
| T |
22118515 |
tgaaaatcatcactacatacaaagctcttcacaaacaaatcaaattccaagc--tctcattatatctcttggatc |
22118443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 24244287 - 24244235
Alignment:
| Q |
174 |
aagtctattgggcttaatagttttgagatagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
24244287 |
aagtctattgggctgaatagttt-gagatagaaaattccaacctttcttttgct |
24244235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 24290911 - 24290859
Alignment:
| Q |
174 |
aagtctattgggcttaatagttttgagatagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
24290911 |
aagtctattgggctgaatagttt-gagatagaaaattccaacctttcttttgct |
24290859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 13815617 - 13815565
Alignment:
| Q |
174 |
aagtctattgggcttaatagttttgagatagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||| |||||||||||||||||| |||||||||||| |||||||||||||||| |
|
|
| T |
13815617 |
aagtttattgggcttaatagttta-agatagaaaattccaacctttcttttgct |
13815565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 42732818 - 42732770
Alignment:
| Q |
174 |
aagtctattgggcttaatagttttgagatagaa-aatttcaacctttctt |
222 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| | |||||||||||||| |
|
|
| T |
42732818 |
aagtctattgggcttaatag-tttgagatagaagagtttcaacctttctt |
42732770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 211; Significance: 1e-116; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 3242707 - 3242481
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctgtcttactatatctcttggatcatctctcttgaatttgcctcttgta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3242707 |
tgaaaatcatcactacaaacaaagctcttcgcatacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcctcttgta |
3242608 |
T |
|
| Q |
101 |
aaactcaaacaaagatttgagtatttattcgatccaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgag |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3242607 |
aaactcaaacaaagatttgagtatttattcgatccaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgag |
3242508 |
T |
|
| Q |
201 |
atagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||||||||| |||||||||||||||| |
|
|
| T |
3242507 |
atagaaaattccaacctttcttttgct |
3242481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 54690333 - 54690107
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctgtcttactatatctcttggatcatctctcttgaatttgcctcttgta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54690333 |
tgaaaatcatcactacaaacaaagctcttcgcatacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcctcttgta |
54690234 |
T |
|
| Q |
101 |
aaactcaaacaaagatttgagtatttattcgatccaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgag |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54690233 |
aaactcaaacaaagatttgagtatttattcgatccaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgag |
54690134 |
T |
|
| Q |
201 |
atagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||||||||| |||||||||||||||| |
|
|
| T |
54690133 |
atagaaaattccaacctttcttttgct |
54690107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 54699764 - 54699538
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctgtcttactatatctcttggatcatctctcttgaatttgcctcttgta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54699764 |
tgaaaatcatcactacaaacaaagctcttcgcatacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcctcttgta |
54699665 |
T |
|
| Q |
101 |
aaactcaaacaaagatttgagtatttattcgatccaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgag |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54699664 |
aaactcaaacaaagatttgagtatttattcgatccaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgag |
54699565 |
T |
|
| Q |
201 |
atagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||||||||| |||||||||||||||| |
|
|
| T |
54699564 |
atagaaaattccaacctttcttttgct |
54699538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 26812276 - 26812502
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctgtcttactatatctcttggatcatctctcttgaatttgcctcttgta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26812276 |
tgaaaatcatcactacaaacaaagctcttcgcatacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcctcttgta |
26812375 |
T |
|
| Q |
101 |
aaactcaaacaaagatttgagtatttattcgatccaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgag |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26812376 |
aaactcaaacaaagatttgagtatttattcgatccaaacaaatctcttcaaacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgag |
26812475 |
T |
|
| Q |
201 |
atagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||||||||| |||||||||||||||| |
|
|
| T |
26812476 |
atagaaaattccaacctttcttttgct |
26812502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 26821743 - 26821969
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctgtcttactatatctcttggatcatctctcttgaatttgcctcttgta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26821743 |
tgaaaatcatcactacaaacaaagctcttcgcatacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcctcttgta |
26821842 |
T |
|
| Q |
101 |
aaactcaaacaaagatttgagtatttattcgatccaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgag |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26821843 |
aaactcaaacaaagatttgagtatttattcgatccaaacaaatctcttcaaacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgag |
26821942 |
T |
|
| Q |
201 |
atagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||||||||| |||||||||||||||| |
|
|
| T |
26821943 |
atagaaaattccaacctttcttttgct |
26821969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 3917834 - 3918060
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctgtcttactatatctcttggatcatctctcttgaatttgcctcttgta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3917834 |
tgaaaatcatcactacaaacaaagctcttcgcatacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcctcttgta |
3917933 |
T |
|
| Q |
101 |
aaactcaaacaaagatttgagtatttattcgatccaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgag |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3917934 |
aaactcaaacaaagatttgagtatttattcgatccaaacaaatctcttcaaacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgag |
3918033 |
T |
|
| Q |
201 |
atagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
| |||||||| |||||||||||||||| |
|
|
| T |
3918034 |
aaagaaaattccaacctttcttttgct |
3918060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 15843317 - 15843092
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctgtcttactatatctcttggatcatctctcttgaatttgcctcttgta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| || ||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||| | ||||| |
|
|
| T |
15843317 |
tgaaaatcatcactacaaacaaagctcttcgcaaacaaagcaaattccaagctctctcactatatctcttggatcttctctcttgaatttgc-tattgta |
15843219 |
T |
|
| Q |
101 |
aaactcaaacaaagatttgagtatttattcgatccaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgag |
200 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15843218 |
aaactcaaacaaagatttgagtatttatttgatccaaacaaatctcatcatacaaagtgtgttgtatttctcaaagtctattgggcttaatagttttgag |
15843119 |
T |
|
| Q |
201 |
atagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
15843118 |
atagaaaatttcaacctttcttttgct |
15843092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 37058855 - 37059080
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctgtcttactatatctcttggatcatctctcttgaatttgcctcttgta |
100 |
Q |
| |
|
||||||||||||||||||||| |||||||| || ||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||| ||||||| |
|
|
| T |
37058855 |
tgaaaatcatcactacaaacagagctcttcgcaaacaaagcaaattccaagctctctcactatatctcttggatcttctctcttgaatttgc-tcttgta |
37058953 |
T |
|
| Q |
101 |
aaactcaaacaaagatttgagtatttattcgatccaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgag |
200 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
37058954 |
aaactcaaacaaagatttgagtatttatttgatccaaacaaatctcatcatacaaagtgtgttgtatttctcaaagtctattgagcttaatagttttgag |
37059053 |
T |
|
| Q |
201 |
atagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||||||||| |||||||||||||||| |
|
|
| T |
37059054 |
atagaaaattccaacctttcttttgct |
37059080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0028 (Bit Score: 207; Significance: 1e-113; HSPs: 2)
Name: scaffold0028
Description:
Target: scaffold0028; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 94851 - 94625
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctgtcttactatatctcttggatcatctctcttgaatttgcctcttgta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
94851 |
tgaaaatcatcactacaaacaaagctcttcgcatacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcctcttgta |
94752 |
T |
|
| Q |
101 |
aaactcaaacaaagatttgagtatttattcgatccaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgag |
200 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
94751 |
aaactcaaacaaagatttgagtatctattcgatccaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgag |
94652 |
T |
|
| Q |
201 |
atagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||||||||| |||||||||||||||| |
|
|
| T |
94651 |
atagaaaattccaacctttcttttgct |
94625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0028; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 104292 - 104066
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctgtcttactatatctcttggatcatctctcttgaatttgcctcttgta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
104292 |
tgaaaatcatcactacaaacaaagctcttcgcatacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcctcttgta |
104193 |
T |
|
| Q |
101 |
aaactcaaacaaagatttgagtatttattcgatccaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgag |
200 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
104192 |
aaactcaaacaaagatttgagtatctattcgatccaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgag |
104093 |
T |
|
| Q |
201 |
atagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||||||||| |||||||||||||||| |
|
|
| T |
104092 |
atagaaaattccaacctttcttttgct |
104066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 7592774 - 7593000
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctgtcttactatatctcttggatcatctctcttgaatttgcctcttgta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7592774 |
tgaaaatcatcactacaaacaaagctcttcgcatacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcctcttgta |
7592873 |
T |
|
| Q |
101 |
aaactcaaacaaagatttgagtatttattcgatccaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgag |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7592874 |
aaactcaaacaaagatttgagtatttattcgatccaaacaaatctcttcatacaaagtgtgttgtatttctcaaagtctattgggcttaatagttttgag |
7592973 |
T |
|
| Q |
201 |
atagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||||||||| |||||||||||||||| |
|
|
| T |
7592974 |
atagaaaattccaacctttcttttgct |
7593000 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 77 - 227
Target Start/End: Original strand, 15174385 - 15174534
Alignment:
| Q |
77 |
tctctcttgaatttgcctcttgtaaaactcaaacaaagatttgagtatttattcgatccaaacaaatctcttcatacaaagagtgttgtatttctcaaag |
176 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
15174385 |
tctctcttgaatttgc-tcttgtaaaactcaaacaaagatttgagtatttatttgatccaaacaaatctcttcatacaaagtgtgttgtatttctcaaag |
15174483 |
T |
|
| Q |
177 |
tctattgggcttaatagttttgagatagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
15174484 |
tctattgggcttaatagttttgagatagaaaattccaacctttcttttgct |
15174534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 15173087 - 15173157
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctgtcttactatatctcttg |
71 |
Q |
| |
|
|||||||||||||||||||||||||||||| || |||||| |||||||| ||| ||| ||||||||||||| |
|
|
| T |
15173087 |
tgaaaatcatcactacaaacaaagctcttcgcaaacaaagaaaattccatgctctctcactatatctcttg |
15173157 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 15202510 - 15202571
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctgtcttacta |
62 |
Q |
| |
|
|||||||||||||||||||||||||||||| || |||||| |||||||||||| ||| |||| |
|
|
| T |
15202510 |
tgaaaatcatcactacaaacaaagctcttcgcaaacaaaggaaattccaagctctctcacta |
15202571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 11634574 - 11634522
Alignment:
| Q |
174 |
aagtctattgggcttaatagttttgagatagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
11634574 |
aagtctattgggctgaatagttt-gagatagaaaattccaacctttcttttgct |
11634522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 204; Significance: 1e-111; HSPs: 9)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 28352141 - 28351914
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctgtcttactatatctcttggatcatctctcttgaatttgcctcttgta |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28352141 |
tgaaaatcatcactacaaacaaagctcttcacaaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcctcttgta |
28352042 |
T |
|
| Q |
101 |
aaactcaaacaaagatttgagtatttattcgatcc-aaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttga |
199 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28352041 |
aaactcaaacaaagatttgagtatttattcgatccaaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttga |
28351942 |
T |
|
| Q |
200 |
gatagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
||||||||||| |||||||||||||||| |
|
|
| T |
28351941 |
gatagaaaattccaacctttcttttgct |
28351914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 28368074 - 28367847
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctgtcttactatatctcttggatcatctctcttgaatttgcctcttgta |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28368074 |
tgaaaatcatcactacaaacaaagctcttcacaaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcctcttgta |
28367975 |
T |
|
| Q |
101 |
aaactcaaacaaagatttgagtatttattcgatcc-aaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttga |
199 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28367974 |
aaactcaaacaaagatttgagtatttattcgatccaaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttga |
28367875 |
T |
|
| Q |
200 |
gatagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
||||||||||| |||||||||||||||| |
|
|
| T |
28367874 |
gatagaaaattccaacctttcttttgct |
28367847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 28375892 - 28375665
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctgtcttactatatctcttggatcatctctcttgaatttgcctcttgta |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28375892 |
tgaaaatcatcactacaaacaaagctcttcacaaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcctcttgta |
28375793 |
T |
|
| Q |
101 |
aaactcaaacaaagatttgagtatttattcgatcc-aaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttga |
199 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28375792 |
aaactcaaacaaagatttgagtatttattcgatccaaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttga |
28375693 |
T |
|
| Q |
200 |
gatagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
||||||||||| |||||||||||||||| |
|
|
| T |
28375692 |
gatagaaaattccaacctttcttttgct |
28375665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 28383714 - 28383487
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctgtcttactatatctcttggatcatctctcttgaatttgcctcttgta |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28383714 |
tgaaaatcatcactacaaacaaagctcttcacaaacaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcctcttgta |
28383615 |
T |
|
| Q |
101 |
aaactcaaacaaagatttgagtatttattcgatcc-aaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttga |
199 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28383614 |
aaactcaaacaaagatttgagtatttattcgatccaaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttga |
28383515 |
T |
|
| Q |
200 |
gatagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
||||||||||| |||||||||||||||| |
|
|
| T |
28383514 |
gatagaaaattccaacctttcttttgct |
28383487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 35 - 227
Target Start/End: Complemental strand, 24794932 - 24794740
Alignment:
| Q |
35 |
acaaagcaaattccaagctgtcttactatatctcttggatcatctctcttgaatttgcctcttgtaaaactcaaacaaagatttgagtatttattcgatc |
134 |
Q |
| |
|
||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24794932 |
acaaagcaaattccaagctctctcactatatctcttggatcatctctcttgaatttgcctcttgtaaaactcaaacaaagatttgagtatttattcgatc |
24794833 |
T |
|
| Q |
135 |
caaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgagatagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
24794832 |
caaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgagatagaaaattccaacctttcttttgct |
24794740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 96 - 227
Target Start/End: Complemental strand, 38529502 - 38529371
Alignment:
| Q |
96 |
ttgtaaaactcaaacaaagatttgagtatttattcgatccaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagtt |
195 |
Q |
| |
|
|||||||||| |||||||| ||||||||||||| |||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||| ||| |
|
|
| T |
38529502 |
ttgtaaaactaaaacaaagtattgagtatttatttgatccaaacaaatctcatcatacaaagtgtgttgtaattctcaaagtctattgggcttaatcgtt |
38529403 |
T |
|
| Q |
196 |
ttgagatagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
||||||||||||||| |||||||||||||||| |
|
|
| T |
38529402 |
ttgagatagaaaattccaacctttcttttgct |
38529371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 4951364 - 4951587
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctgtcttactatatctcttggatcatctctcttgaatttgcctcttgta |
100 |
Q |
| |
|
||||||||| ||||||||||||| ||||| || ||||||||||||||||| | ||| ||||| ||||||||||| ||||| | ||||||| || ||||| |
|
|
| T |
4951364 |
tgaaaatcaccactacaaacaaaactctttgcaaacaaagcaaattccaagttctctcactatgtctcttggatcttctctttcgaatttg-ctattgta |
4951462 |
T |
|
| Q |
101 |
aaa-ctcaaacaaagatttgagtatttattcgatccaaa-caaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttg |
198 |
Q |
| |
|
||| ||||||||||| ||||||||||||| |||||||| |||||||| | ||||| |||||||||||||| | ||||||| |||||||||| |||| |
|
|
| T |
4951463 |
aaatctcaaacaaagtgttgagtatttatttgatccaaaccaaatctcattgtacaa--tgtgttgtatttctc-atgtctatttggcttaatag-tttg |
4951558 |
T |
|
| Q |
199 |
agatagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
4951559 |
agatagaaaatttcaacctttcttttgct |
4951587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 27169141 - 27169216
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctgtcttactatatctcttggatcat |
77 |
Q |
| |
|
||||||||||||||||| |||||| |||||||| ||||| ||||| |||||| ||| | ||||||| ||||||||| |
|
|
| T |
27169141 |
tgaaaatcatcactacatacaaagttcttcacaaacaaa-aaaatttcaagctctctcattatatcttttggatcat |
27169216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 38529557 - 38529528
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttc |
30 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
38529557 |
tgaaaatcatcactacaaacaaagctcttc |
38529528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 191; Significance: 1e-104; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 23896036 - 23895810
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctgtcttactatatctcttggatcatctctcttgaatttgcctcttgta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| || ||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
23896036 |
tgaaaatcatcactacaaacaaagctcttcgcaaacaaagcaaattccaagctctctcactatatctcttggatcttctctcttgaatttgcctcttgta |
23895937 |
T |
|
| Q |
101 |
aaactcaaacaaagatttgagtatttattcgatccaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgag |
200 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23895936 |
aaactcaaacaaagatttgagtatttatttgatccaaacaaatctcatcatacaaagtgtgttgtatttctcaaagtctattgggcttaatagttttgag |
23895837 |
T |
|
| Q |
201 |
atagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||||||||| |||||||||||||||| |
|
|
| T |
23895836 |
atagaaaattccaacctttcttttgct |
23895810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 18420320 - 18420545
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctgtcttactatatctcttggatcatctctcttgaatttgcctcttgta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| || ||||||||||||| ||||| ||| ||||||||||||||||| |||| ||||||||||| ||||||| |
|
|
| T |
18420320 |
tgaaaatcatcactacaaacaaagctcttcgcaaacaaagcaaattcaaagctctctcactatatctcttggatcttctcacttgaatttgc-tcttgta |
18420418 |
T |
|
| Q |
101 |
aaactcaaacaaagatttgagtatttattcgatccaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgag |
200 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
18420419 |
aaactcaaacaaagatttgagtatttatttgatccaaacaaatctcttcatacaaagtgtgttgtatttctcaaagtctattgggcttaatagtttggag |
18420518 |
T |
|
| Q |
201 |
atagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||||||||| |||||||||||||||| |
|
|
| T |
18420519 |
atagaaaattccaacctttcttttgct |
18420545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0040 (Bit Score: 161; Significance: 5e-86; HSPs: 2)
Name: scaffold0040
Description:
Target: scaffold0040; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 35 - 227
Target Start/End: Complemental strand, 31209 - 31017
Alignment:
| Q |
35 |
acaaagcaaattccaagctgtcttactatatctcttggatcatctctcttgaatttgcctcttgtaaaactcaaacaaagatttgagtatttattcgatc |
134 |
Q |
| |
|
||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
31209 |
acaaagcaaattccaagctctctcactatatctcttggatcttctctcttgaatttgcctcttgtaaaactcaaacaaagatttgagtatttatttgatc |
31110 |
T |
|
| Q |
135 |
caaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgagatagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
31109 |
caaacaaatctcatcatacaaagtgtgttgtatgtctcaaagtctattgggcttaatagttttgagatagaaaattccaacctttcttttgct |
31017 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0040; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 9814 - 10021
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctgtcttactatatctcttggatcatctctcttgaatttgcctcttgta |
100 |
Q |
| |
|
|||||| ||||||||||||||||||||||| || |||||||||||| |||||| ||| |||||||| ||||||| ||||| | |||||| | ||||| |
|
|
| T |
9814 |
tgaaaaacatcactacaaacaaagctcttcgcaaacaaagcaaatttcaagctctctcactatatcacttggatattctctttcaaatttg-ttattgta |
9912 |
T |
|
| Q |
101 |
aaa-ctcaaacaaagatttgagtatttattcgatccaaa-caaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttg |
198 |
Q |
| |
|
||| ||||||| | | ||||||||||||| |||||||| |||||||| | |||||||| |||||||| ||||| ||||||||| ||||||||| |||| |
|
|
| T |
9913 |
aaatctcaaac-aggtgttgagtatttatttgatccaaaccaaatctcattatacaaagtgtgttgtaattctc-aagtctattatgcttaatag-tttg |
10009 |
T |
|
| Q |
199 |
agatagaaaatt |
210 |
Q |
| |
|
|||||||||||| |
|
|
| T |
10010 |
agatagaaaatt |
10021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 159; Significance: 8e-85; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 31710885 - 31710660
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctgtcttactatatctcttggatcatctctcttgaatttgcctcttgta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| || ||||||||||||||||||| ||| ||||||||||||||||| ||||| | || ||||| | ||||| |
|
|
| T |
31710885 |
tgaaaatcatcactacaaacaaagctcttcgcaaacaaagcaaattccaagctctctcactatatctcttggatcttctctttcgagtttgc-tattgta |
31710787 |
T |
|
| Q |
101 |
aaactcaaacaaagatttgagtatttattcgatccaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgag |
200 |
Q |
| |
|
||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
31710786 |
aaactcaaacaaagaattgagtatttatttgatccaaacaaatctcatcatacaaagtgtgttgtatttctcaaagtctattgggcttactagttttgag |
31710687 |
T |
|
| Q |
201 |
atagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||||||||| |||||||||||||||| |
|
|
| T |
31710686 |
atagaaaattccaacctttcttttgct |
31710660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 24023161 - 24022936
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctgtcttactatatctcttggatcatctctcttgaatttgcctcttgta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| || | ||||||||||||||||| ||| ||||||||||||||||| ||||| | |||||||| | ||||| |
|
|
| T |
24023161 |
tgaaaatcatcactacaaacaaagctcttcgcaaataaagcaaattccaagctctctcactatatctcttggatcttctctttcgaatttgc-tattgta |
24023063 |
T |
|
| Q |
101 |
aaactcaaacaaagatttgagtatttattcgatccaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgag |
200 |
Q |
| |
|
|||||||||||||| ||||||||||||| |||||||| |||| || |||||||||| ||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
24023062 |
aaactcaaacaaagtattgagtatttatttgatccaaagaaatttcatcatacaaagtgtgttgtatttctcaaagtctattggggttaatagttttgag |
24022963 |
T |
|
| Q |
201 |
atagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||||||||||||||||| |||||||| |
|
|
| T |
24022962 |
atagaaaatttcaaccttccttttgct |
24022936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 148 - 227
Target Start/End: Original strand, 14273121 - 14273198
Alignment:
| Q |
148 |
tcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgagatagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||||||||| || ||||||||||||| |||||||||||||||||| ||| |||||||||||| |||| ||||||||||| |
|
|
| T |
14273121 |
tcatacaaagtgtattgtatttctcaa-gtctattgggcttaatag-tttaagatagaaaattccaacatttcttttgct |
14273198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 14272824 - 14272889
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctgtcttactatatct |
67 |
Q |
| |
|
||||||||||||||||| ||||| ||||||||| ||||| |||| ||||| || ||| ||||||||| |
|
|
| T |
14272824 |
tgaaaatcatcactacatacaaaactcttcacaaacaaaacaaactccaa-ctctctcactatatct |
14272889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0233 (Bit Score: 149; Significance: 7e-79; HSPs: 1)
Name: scaffold0233
Description:
Target: scaffold0233; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 35 - 227
Target Start/End: Complemental strand, 26506 - 26315
Alignment:
| Q |
35 |
acaaagcaaattccaagctgtcttactatatctcttggatcatctctcttgaatttgcctcttgtaaaactcaaacaaagatttgagtatttattcgatc |
134 |
Q |
| |
|
||||||||||||||||||| ||| |||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
26506 |
acaaagcaaattccaagctctctcactatatcccttggatcttctctcttgaatttgc-tcttgtaaaactcaaacaaagatttgagtatttattttatc |
26408 |
T |
|
| Q |
135 |
caaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgagatagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
26407 |
caaacaaatctcatcatacaaagtgtgttgtatttctcaaagtctattgggcttaatagttttgagatagaaaattccaacctttcttttgct |
26315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 131 - 227
Target Start/End: Original strand, 408226 - 408322
Alignment:
| Q |
131 |
gatccaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgagatagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
408226 |
gatccaaacaaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttgagatagaaaattccaacctttcttttgct |
408322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 15810400 - 15810176
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctgtcttactatatctcttggatcatctctcttgaatttgcctcttgta |
100 |
Q |
| |
|
|||||| |||||||||||||||||||| || || |||||||||||| |||||| ||| ||||||||||||| ||| ||||| | ||||||| || ||||| |
|
|
| T |
15810400 |
tgaaaaacatcactacaaacaaagctcctcgcaaacaaagcaaatttcaagctctctcactatatctcttgcatcttctctttcgaatttg-ctattgta |
15810302 |
T |
|
| Q |
101 |
aaa-ctcaaacaaagatttgagtatttattcgatccaaa-caaatctcttcatacaaagagtgttgtatttctcaaagtctattgggcttaatagttttg |
198 |
Q |
| |
|
||| ||||||| ||| ||||||||||||| ||||||| ||||| || | |||||||| |||||||| ||||| |||| | ||| ||||||||| |||| |
|
|
| T |
15810301 |
aaatctcaaac-aagtgttgagtatttattttatccaaaccaaatatcattatacaaagtgtgttgtaattctc-aagtatgttgagcttaatag-tttg |
15810205 |
T |
|
| Q |
199 |
agatagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||||||||||| |||||||||||||||| |
|
|
| T |
15810204 |
agatagaaaattccaacctttcttttgct |
15810176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 40999452 - 40999283
Alignment:
| Q |
1 |
tgaaaatcatcactacaaacaaagctcttcacatacaaagcaaattccaagctgtcttactatatctcttggatcatctctcttgaatttgcctcttgta |
100 |
Q |
| |
|
|||||| |||||||||| |||||||||||| || |||||| |||||||||||| ||| ||||||||||||||||| ||||| | ||||||| || |||| |
|
|
| T |
40999452 |
tgaaaaacatcactacatacaaagctcttcgcaaacaaagtaaattccaagctctctcactatatctcttggatcttctctttcgaatttg-cttatgta |
40999354 |
T |
|
| Q |
101 |
aaactcaaacaaagatttgagtatttattcgatccaaa-caaatctcttcatacaaagagtgttgtatttct |
171 |
Q |
| |
|
|| ||||||| ||| ||||| ||||||| |||||||| |||||||| || ||||||| || ||||| |||| |
|
|
| T |
40999353 |
aatctcaaac-aagtgttgagaatttatttgatccaaaccaaatctcatcttacaaagtgtattgtaattct |
40999283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0010 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0010
Description:
Target: scaffold0010; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 256901 - 256953
Alignment:
| Q |
174 |
aagtctattgggcttaatagttttgagatagaaaatttcaacctttcttttgct |
227 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
256901 |
aagtctattgggctgaatagttt-gagatagaaaattccaacctttcttttgct |
256953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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