View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10261A_low_405 (Length: 227)

Name: NF10261A_low_405
Description: NF10261A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10261A_low_405
NF10261A_low_405
[»] chr2 (42 HSPs)
chr2 (1-227)||(19456782-19457008)
chr2 (2-227)||(21703526-21703751)
chr2 (1-227)||(27434808-27435034)
chr2 (1-215)||(27392656-27392870)
chr2 (44-203)||(23128973-23129132)
chr2 (44-227)||(28881865-28882048)
chr2 (44-227)||(20837569-20837752)
chr2 (44-203)||(12655217-12655376)
chr2 (56-189)||(37374850-37374983)
chr2 (50-189)||(261178-261317)
chr2 (50-157)||(12717018-12717125)
chr2 (50-189)||(13936957-13937096)
chr2 (50-189)||(34279138-34279277)
chr2 (50-156)||(21677595-21677701)
chr2 (50-189)||(12586490-12586629)
chr2 (50-157)||(31876002-31876109)
chr2 (50-189)||(34286043-34286182)
chr2 (50-189)||(34291103-34291242)
chr2 (50-157)||(34861401-34861508)
chr2 (50-157)||(37686322-37686429)
chr2 (50-157)||(37701587-37701694)
chr2 (50-189)||(37925182-37925321)
chr2 (50-157)||(39889783-39889890)
chr2 (50-189)||(9350407-9350546)
chr2 (62-157)||(16829763-16829858)
chr2 (62-157)||(16891623-16891718)
chr2 (50-189)||(27776896-27777035)
chr2 (50-189)||(27803381-27803520)
chr2 (50-189)||(27816663-27816802)
chr2 (50-189)||(40233188-40233327)
chr2 (50-180)||(19416912-19417042)
chr2 (50-156)||(22926441-22926547)
chr2 (50-150)||(11635602-11635702)
chr2 (50-150)||(11641791-11641891)
chr2 (62-150)||(32049526-32049614)
chr2 (1-54)||(31891689-31891742)
chr2 (77-189)||(39052268-39052380)
chr2 (2-54)||(3784481-3784533)
chr2 (2-54)||(16163426-16163478)
chr2 (2-54)||(27118515-27118567)
chr2 (2-54)||(34156838-34156890)
chr2 (2-54)||(34303665-34303717)
[»] chr3 (57 HSPs)
chr3 (2-227)||(16626920-16627144)
chr3 (1-227)||(18530013-18530239)
chr3 (1-227)||(15893122-15893348)
chr3 (44-227)||(8295591-8295774)
chr3 (44-227)||(8301723-8301906)
chr3 (44-203)||(4797112-4797271)
chr3 (44-227)||(15741541-15741724)
chr3 (44-203)||(18050902-18051061)
chr3 (50-189)||(4721285-4721424)
chr3 (50-189)||(35880420-35880559)
chr3 (44-189)||(29149214-29149359)
chr3 (50-182)||(18330335-18330467)
chr3 (50-189)||(6191970-6192109)
chr3 (50-189)||(8211395-8211534)
chr3 (50-189)||(18277517-18277656)
chr3 (50-189)||(18292818-18292957)
chr3 (50-189)||(18308119-18308258)
chr3 (50-189)||(22871339-22871478)
chr3 (50-189)||(22886398-22886537)
chr3 (50-156)||(5466672-5466778)
chr3 (50-180)||(5596831-5596961)
chr3 (50-192)||(10395787-10395929)
chr3 (50-189)||(7072866-7073005)
chr3 (50-157)||(18224877-18224984)
chr3 (50-189)||(47023107-47023246)
chr3 (50-192)||(28116422-28116564)
chr3 (56-157)||(4347155-4347256)
chr3 (50-203)||(6542939-6543092)
chr3 (56-157)||(28020964-28021065)
chr3 (62-157)||(5013398-5013493)
chr3 (62-157)||(17985433-17985528)
chr3 (50-189)||(18242381-18242520)
chr3 (50-189)||(20577327-20577466)
chr3 (62-192)||(7996213-7996343)
chr3 (62-192)||(10642721-10642851)
chr3 (44-150)||(20065739-20065845)
chr3 (50-180)||(36997554-36997684)
chr3 (50-180)||(51781674-51781804)
chr3 (50-189)||(11110826-11110965)
chr3 (50-189)||(21674347-21674486)
chr3 (50-156)||(4416603-4416709)
chr3 (50-180)||(24327822-24327952)
chr3 (50-156)||(28338989-28339095)
chr3 (50-156)||(31964938-31965044)
chr3 (50-156)||(50134536-50134642)
chr3 (50-153)||(5609787-5609890)
chr3 (50-180)||(51796762-51796893)
chr3 (50-126)||(29665450-29665526)
chr3 (50-189)||(48465569-48465708)
chr3 (2-79)||(22387992-22388069)
chr3 (2-54)||(4625736-4625788)
chr3 (2-54)||(5652179-5652231)
chr3 (2-54)||(5713016-5713068)
chr3 (2-54)||(5723926-5723978)
chr3 (2-54)||(5757499-5757551)
chr3 (2-54)||(5768390-5768442)
chr3 (2-54)||(17994198-17994250)
[»] scaffold0124 (2 HSPs)
scaffold0124 (2-227)||(20067-20292)
scaffold0124 (44-227)||(30108-30291)
[»] chr4 (24 HSPs)
chr4 (2-227)||(15227543-15227768)
chr4 (1-227)||(15285300-15285526)
chr4 (2-227)||(1899930-1900155)
chr4 (1-215)||(14235900-14236114)
chr4 (44-227)||(14664688-14664871)
chr4 (64-215)||(15391771-15391922)
chr4 (44-203)||(17013694-17013853)
chr4 (50-219)||(24592735-24592904)
chr4 (50-189)||(14763728-14763867)
chr4 (50-189)||(36344936-36345075)
chr4 (50-189)||(6569561-6569700)
chr4 (50-189)||(14098249-14098388)
chr4 (50-189)||(19372969-19373108)
chr4 (50-157)||(31126942-31127049)
chr4 (62-157)||(27163753-27163848)
chr4 (50-157)||(30753482-30753589)
chr4 (50-189)||(54833098-54833237)
chr4 (50-180)||(18801046-18801176)
chr4 (50-180)||(33674234-33674364)
chr4 (50-227)||(40106062-40106239)
chr4 (62-150)||(5005617-5005705)
chr4 (62-157)||(21969441-21969536)
chr4 (50-189)||(39850331-39850470)
chr4 (2-54)||(24460978-24461030)
[»] chr7 (29 HSPs)
chr7 (2-227)||(16040982-16041207)
chr7 (2-227)||(16450257-16450482)
chr7 (1-227)||(16518677-16518903)
chr7 (1-227)||(16503641-16503867)
chr7 (44-227)||(2154229-2154412)
chr7 (44-189)||(10917169-10917314)
chr7 (51-189)||(11425087-11425225)
chr7 (50-189)||(5127686-5127825)
chr7 (50-192)||(45387034-45387176)
chr7 (50-189)||(31124605-31124744)
chr7 (50-189)||(5147650-5147789)
chr7 (50-189)||(9618345-9618484)
chr7 (50-189)||(24592851-24592990)
chr7 (50-157)||(26275404-26275511)
chr7 (50-156)||(4145433-4145539)
chr7 (50-155)||(26320179-26320284)
chr7 (50-157)||(3445020-3445127)
chr7 (50-189)||(16736770-16736909)
chr7 (50-189)||(16751824-16751963)
chr7 (50-189)||(17523226-17523365)
chr7 (50-189)||(17529850-17529989)
chr7 (50-180)||(11441263-11441393)
chr7 (50-157)||(26486054-26486161)
chr7 (50-189)||(26670224-26670363)
chr7 (50-157)||(31564709-31564816)
chr7 (50-189)||(26538183-26538322)
chr7 (56-126)||(26435014-26435084)
chr7 (2-54)||(31088723-31088775)
chr7 (2-54)||(45733292-45733344)
[»] chr1 (7 HSPs)
chr1 (1-227)||(20460762-20460988)
chr1 (1-227)||(16208400-16208626)
chr1 (50-189)||(10962362-10962501)
chr1 (44-157)||(41793726-41793839)
chr1 (50-189)||(51637910-51638049)
chr1 (50-180)||(28584682-28584812)
chr1 (2-54)||(20340708-20340760)
[»] chr5 (49 HSPs)
chr5 (1-227)||(23891870-23892096)
chr5 (1-227)||(25198696-25198922)
chr5 (46-227)||(24951774-24951955)
chr5 (44-227)||(24688472-24688655)
chr5 (44-227)||(30934300-30934483)
chr5 (44-227)||(23752765-23752948)
chr5 (44-189)||(11549056-11549201)
chr5 (44-189)||(23718303-23718448)
chr5 (44-189)||(22999429-22999574)
chr5 (50-189)||(33777189-33777328)
chr5 (50-189)||(15659081-15659220)
chr5 (44-189)||(2510753-2510898)
chr5 (50-219)||(40473873-40474042)
chr5 (50-189)||(9317153-9317292)
chr5 (50-189)||(6874004-6874143)
chr5 (50-157)||(12131889-12131996)
chr5 (2-77)||(22888287-22888362)
chr5 (50-157)||(24681171-24681278)
chr5 (50-157)||(24723698-24723805)
chr5 (50-157)||(37771320-37771427)
chr5 (50-156)||(8665796-8665902)
chr5 (50-192)||(15759178-15759320)
chr5 (56-189)||(9548870-9549003)
chr5 (50-203)||(37358976-37359129)
chr5 (56-180)||(41674420-41674544)
chr5 (50-189)||(5637612-5637751)
chr5 (62-157)||(18375745-18375840)
chr5 (50-189)||(18501069-18501208)
chr5 (50-189)||(26480094-26480233)
chr5 (62-157)||(30151752-30151847)
chr5 (62-189)||(30168171-30168298)
chr5 (50-189)||(31431130-31431269)
chr5 (50-157)||(31826740-31826847)
chr5 (50-157)||(37671813-37671920)
chr5 (50-189)||(37754670-37754809)
chr5 (44-189)||(34616223-34616368)
chr5 (50-189)||(3789228-3789367)
chr5 (62-157)||(33516090-33516185)
chr5 (44-157)||(32599784-32599897)
chr5 (50-189)||(13325165-13325304)
chr5 (50-189)||(43077951-43078090)
chr5 (62-180)||(28648937-28649055)
chr5 (51-157)||(28960120-28960226)
chr5 (50-180)||(29967387-29967517)
chr5 (50-180)||(30029126-30029256)
chr5 (2-54)||(11325634-11325686)
chr5 (2-54)||(13184918-13184970)
chr5 (2-54)||(13440764-13440816)
chr5 (2-54)||(33877087-33877139)
[»] chr8 (22 HSPs)
chr8 (1-227)||(16283104-16283330)
chr8 (1-215)||(22081206-22081420)
chr8 (44-219)||(19687761-19687936)
chr8 (44-227)||(16277209-16277392)
chr8 (44-227)||(14557282-14557465)
chr8 (44-189)||(2137636-2137781)
chr8 (44-227)||(27609282-27609465)
chr8 (50-189)||(18710279-18710418)
chr8 (50-192)||(19674128-19674270)
chr8 (50-180)||(31490133-31490263)
chr8 (44-156)||(31354250-31354362)
chr8 (50-157)||(19208743-19208850)
chr8 (50-189)||(19286158-19286297)
chr8 (62-189)||(28362350-28362477)
chr8 (50-227)||(3329902-3330079)
chr8 (50-203)||(29828992-29829145)
chr8 (50-189)||(19518526-19518665)
chr8 (50-180)||(33258425-33258555)
chr8 (50-203)||(12093116-12093269)
chr8 (1-54)||(44562932-44562985)
chr8 (2-54)||(19659371-19659423)
chr8 (2-54)||(9354453-9354505)
[»] scaffold0089 (3 HSPs)
scaffold0089 (1-227)||(29418-29644)
scaffold0089 (44-227)||(40487-40670)
scaffold0089 (44-219)||(47403-47578)
[»] scaffold0109 (1 HSPs)
scaffold0109 (1-215)||(21234-21448)
[»] chr6 (41 HSPs)
chr6 (44-222)||(24863374-24863552)
chr6 (44-227)||(13299312-13299495)
chr6 (44-227)||(22935238-22935421)
chr6 (44-227)||(23857683-23857866)
chr6 (49-219)||(20160367-20160534)
chr6 (49-219)||(22172297-22172464)
chr6 (44-227)||(15424678-15424861)
chr6 (44-227)||(26988653-26988836)
chr6 (44-203)||(26999749-26999908)
chr6 (44-189)||(24304979-24305124)
chr6 (50-189)||(26918070-26918209)
chr6 (56-189)||(16749544-16749677)
chr6 (50-189)||(29549168-29549307)
chr6 (2-83)||(22477592-22477673)
chr6 (44-189)||(27044080-27044225)
chr6 (50-189)||(3695753-3695892)
chr6 (50-157)||(4525011-4525118)
chr6 (50-157)||(4757483-4757590)
chr6 (50-189)||(4772687-4772826)
chr6 (50-189)||(27007402-27007541)
chr6 (50-189)||(27484807-27484946)
chr6 (50-157)||(29572735-29572842)
chr6 (44-189)||(17024952-17025097)
chr6 (50-189)||(29501096-29501235)
chr6 (62-157)||(30558395-30558490)
chr6 (50-189)||(34463728-34463867)
chr6 (50-180)||(16944394-16944524)
chr6 (56-156)||(26778000-26778100)
chr6 (50-157)||(27360377-27360484)
chr6 (50-157)||(27450720-27450827)
chr6 (50-203)||(4546151-4546304)
chr6 (50-203)||(28207118-28207271)
chr6 (50-189)||(16673817-16673956)
chr6 (50-203)||(4724510-4724663)
chr6 (56-157)||(26116792-26116893)
chr6 (1-54)||(28162485-28162538)
chr6 (2-54)||(8892626-8892678)
chr6 (2-54)||(13522389-13522441)
chr6 (47-227)||(27272947-27273127)
chr6 (51-227)||(27630077-27630253)
chr6 (2-54)||(33374572-33374624)
[»] scaffold0143 (1 HSPs)
scaffold0143 (44-227)||(26947-27130)
[»] scaffold0029 (1 HSPs)
scaffold0029 (50-219)||(554-723)
[»] scaffold0336 (1 HSPs)
scaffold0336 (50-189)||(7925-8064)
[»] scaffold0099 (1 HSPs)
scaffold0099 (46-227)||(48568-48756)
[»] scaffold0350 (1 HSPs)
scaffold0350 (50-157)||(7663-7770)
[»] scaffold0144 (1 HSPs)
scaffold0144 (50-189)||(26626-26765)
[»] scaffold0237 (1 HSPs)
scaffold0237 (62-157)||(15366-15461)
[»] scaffold0159 (1 HSPs)
scaffold0159 (50-153)||(9490-9593)
[»] scaffold0038 (1 HSPs)
scaffold0038 (50-203)||(7616-7769)
[»] scaffold0415 (1 HSPs)
scaffold0415 (50-189)||(5682-5821)
[»] scaffold0496 (1 HSPs)
scaffold0496 (50-90)||(157-197)
[»] scaffold0260 (1 HSPs)
scaffold0260 (2-54)||(3031-3083)


Alignment Details
Target: chr2 (Bit Score: 199; Significance: 1e-108; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 19456782 - 19457008
Alignment:
Q  1 aggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacc 100  Q
    |||||||||| ||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  19456782 aggatgctgaaagtattgcgcatatgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatggattgaccagctccggcagatacc 19456881  T
Q  101 atccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19456882 atccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctc 19456981  T
Q  201 tgatagcttcttctagacgagtcccca 227  Q
    ||| |||||||||||| ||||||||||    
T  19456982 tgacagcttcttctaggcgagtcccca 19457008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 2 - 227
Target Start/End: Original strand, 21703526 - 21703751
Alignment:
Q  2 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacca 101  Q
    ||||||||| ||||| ||||||| ||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21703526 ggatgctgagagtatggcgcatatgggtacgacggaggtaactaggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacca 21703625  T
Q  102 tccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctct 201  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  21703626 tccctacttctgtttctttcttcttatgatgaccgttaccgtatctctttgatgcatttacagaggattcaactttctcgaatacaataatgccttctct 21703725  T
Q  202 gatagcttcttctagacgagtcccca 227  Q
    || |||||||||||||||||||||||    
T  21703726 gacagcttcttctagacgagtcccca 21703751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 27434808 - 27435034
Alignment:
Q  1 aggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacc 100  Q
    |||||||||| ||||  ||||||| ||||||||||||   |  ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  27434808 aggatgctgagagtacggcgcatatgggtacgacggaggcatttgggcagcattaataggagcaacagtagccatggattgaccggctccggcagacacc 27434907  T
Q  101 atccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctc 200  Q
    ||||||||||| |||||||||||||| || || |||||||| |||||||||||||||||  | ||||||||| |||| ||||| ||||| || |||||||    
T  27434908 atccctacttccgtttctttcttcttgtggtgtccgttaccatacctctttgatgcattcacagaggattcagctttttcgaacacaatgattccttctc 27435007  T
Q  201 tgatagcttcttctagacgagtcccca 227  Q
    |||  |||||||| |||||||| ||||    
T  27435008 tgacggcttcttccagacgagttccca 27435034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 27392870 - 27392656
Alignment:
Q  1 aggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacc 100  Q
    |||||||||| ||||||||   ||| ||||||  |||  || ||| |||||||  || ||||||||||||||||  ||||||| || |||||||||||||    
T  27392870 aggatgctgagagtattgcatgtactggtacggtggaggtagctgagcagcatcgatgggggcaacagtagccacagattgactggttccggcagatacc 27392771  T
Q  101 atccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctc 200  Q
    |||||||||||||| |||||||||||||||||||| ||||| ||| || ||||||||||||| ||||||||| ||||||| || ||||||||||| ||||    
T  27392770 atccctacttctgtctctttcttcttatgatgaccattaccatacttccttgatgcatttgcagaggattcacctttctcaaacacaataatgccgtctc 27392671  T
Q  201 tgatagcttcttcta 215  Q
    ||| ||| |||||||    
T  27392670 tgacagcctcttcta 27392656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 44 - 203
Target Start/End: Original strand, 23128973 - 23129132
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || |||||||| |    
T  23128973 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccgttaccat 23129072  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctga 203  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||    
T  23129073 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctga 23129132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 44 - 227
Target Start/End: Complemental strand, 28882048 - 28881865
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||| ||| |||||||||||||| || || || ||||| |    
T  28882048 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctatttccgtttctttcttcttgtggtgtccattaccat 28881949  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtcccca 227  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || || || |||| ||||||||| |||||||| ||||    
T  28881948 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacagcttcttccagacgagttccca 28881865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 44 - 227
Target Start/End: Complemental strand, 20837752 - 20837569
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||||| |||||||||||||||||||||||||||||| | || ||||| |||||||| |||||||||||||| || || || ||||| |    
T  20837752 tgggctgcattgataggagcaacagtagccatggattgaccggctccgactgacaccattcctacttccgtttctttcttcttgtggtgtccattaccat 20837653  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtcccca 227  Q
    ||||||||||||||||  | | ||||||| |||||||||| ||||| || ||||| ||||  ||||| || |||||||| ||||    
T  20837652 acctctttgatgcattcacagtggattcagctttctcgaacacaatgattccttccctgacggcttcctccagacgagttccca 20837569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 44 - 203
Target Start/End: Complemental strand, 12655376 - 12655217
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||||| |||||||||||||||||||||||||||||| | || ||||| |||||||| |||||||||||||| || || || ||||| |    
T  12655376 tgggctgcattgataggagcaacagtagccatggattgaccggctccgactgacaccattcctacttccgtttctttcttcttgtggtgtccattaccat 12655277  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctga 203  Q
    ||||||||||||||||  | |||| |||| |||||||||| ||||| || ||||| ||||    
T  12655276 acctctttgatgcattcacagagggttcagctttctcgaacacaatgattccttccctga 12655217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 56 - 189
Target Start/End: Complemental strand, 37374983 - 37374850
Alignment:
Q  56 ataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatg 155  Q
    ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| ||||    
T  37374983 ataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatg 37374884  T
Q  156 catttgcggaggattcaactttctcgaatacaat 189  Q
    ||||  | ||||||||| |||||||||| |||||    
T  37374883 cattcacagaggattcagctttctcgaacacaat 37374850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 261178 - 261317
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  261178 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 261277  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | ||||||||  | ||||||||| ||||||| || |||||    
T  261278 tcgatgcattcacagaggattcagctttctcaaacacaat 261317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 50 - 157
Target Start/End: Original strand, 12717018 - 12717125
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  12717018 gcattgataggtgcaacagtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 12717117  T
Q  150 ttgatgca 157  Q
    | ||||||    
T  12717118 tcgatgca 12717125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 13936957 - 13937096
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  13936957 gcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 13937056  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  13937057 tcgacgcattcacagaggattcagctttctcaaacacaat 13937096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 34279277 - 34279138
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  34279277 gcattgataggagcaacagtagccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 34279178  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | || | |||  | ||||||||| ||||||| || |||||    
T  34279177 tcgacgtattcacagaggattcagctttctcaaacacaat 34279138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 50 - 156
Target Start/End: Original strand, 21677595 - 21677701
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  21677595 gcattgataggagcaacagtagccattgattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatacctct 21677694  T
Q  150 ttgatgc 156  Q
    | |||||    
T  21677695 tcgatgc 21677701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 12586629 - 12586490
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||| |||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  12586629 gcattgataggagcaacagtagtcatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 12586530  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  12586529 tcgacgcattcacagaggattcagctttctcaaacacaat 12586490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 157
Target Start/End: Complemental strand, 31876109 - 31876002
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||||||||| |    
T  31876109 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttt 31876010  T
Q  150 ttgatgca 157  Q
    | ||||||    
T  31876009 tcgatgca 31876002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 34286182 - 34286043
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||| ||||||||||||||||||||  | || |||||||||||||| |||||||||||||| || || || ||||| || ||||    
T  34286182 gcattgataggagcaacagtggccatggattgaccggctccacctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatatctct 34286083  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  34286082 tcgatgcactcacagaggattcagctttctcaaacacaat 34286043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 34291242 - 34291103
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||| ||||||||||||||||||||  | || |||||||||||||| |||||||||||||| || || || ||||| || ||||    
T  34291242 gcattgataggagcaacagtggccatggattgaccggctccacctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatatctct 34291143  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  34291142 tcgatgcactcacagaggattcagctttctcaaacacaat 34291103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 157
Target Start/End: Complemental strand, 34861508 - 34861401
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||||||||| |    
T  34861508 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttt 34861409  T
Q  150 ttgatgca 157  Q
    | ||||||    
T  34861408 tcgatgca 34861401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 157
Target Start/End: Original strand, 37686322 - 37686429
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||||||||| |    
T  37686322 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttt 37686421  T
Q  150 ttgatgca 157  Q
    | ||||||    
T  37686422 tcgatgca 37686429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 157
Target Start/End: Original strand, 37701587 - 37701694
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||||||||| |    
T  37701587 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttt 37701686  T
Q  150 ttgatgca 157  Q
    | ||||||    
T  37701687 tcgatgca 37701694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 37925321 - 37925182
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  37925321 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 37925222  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  37925221 tcgatgcactcacagaggattcagctttctcaaacacaat 37925182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 157
Target Start/End: Complemental strand, 39889890 - 39889783
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||| |||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  39889890 gcattgataggagcaacagtggccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 39889791  T
Q  150 ttgatgca 157  Q
    | ||||||    
T  39889790 tcgatgca 39889783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 9350407 - 9350546
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||| ||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  9350407 gcattgataggagcaacagtagtcattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 9350506  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  9350507 tcgacgcattcacagaggattcagctttctcaaacacaat 9350546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 62 - 157
Target Start/End: Original strand, 16829763 - 16829858
Alignment:
Q  62 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgca 157  Q
    ||||| ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| ||||||    
T  16829763 gcaacggtagccatggattgaccggctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatacctcttcgatgca 16829858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 62 - 157
Target Start/End: Complemental strand, 16891718 - 16891623
Alignment:
Q  62 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgca 157  Q
    ||||| ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| ||||||    
T  16891718 gcaacggtagccatggattgaccggctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatacctcttcgatgca 16891623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 27777035 - 27776896
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||| ||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  27777035 gcattgataggagcaacagtagtcattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 27776936  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  27776935 tcgacgcattcacagaggattcagctttctcaaacacaat 27776896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 27803520 - 27803381
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||| ||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  27803520 gcattgataggagcaacagtagtcattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 27803421  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  27803420 tcgacgcattcacagaggattcagctttctcaaacacaat 27803381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 27816802 - 27816663
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||| ||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  27816802 gcattgataggagcaacagtagtcattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 27816703  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  27816702 tcgacgcattcacagaggattcagctttctcaaacacaat 27816663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 40233327 - 40233188
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  40233327 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 40233228  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  40233227 tcgacgcattcacagaggattcagctttctcaaacacaat 40233188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 50 - 180
Target Start/End: Original strand, 19416912 - 19417042
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| ||||| |||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  19416912 gcattgataggagcaacagtagccattgattgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 19417011  T
Q  150 ttgatgcatttgcggaggattcaactttctc 180  Q
    | || |||||  | ||||||||| |||||||    
T  19417012 tcgacgcattcacagaggattcagctttctc 19417042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 50 - 156
Target Start/End: Original strand, 22926441 - 22926547
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| || || ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  22926441 gcattgataggagcgacggtagccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 22926540  T
Q  150 ttgatgc 156  Q
    | |||||    
T  22926541 tcgatgc 22926547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 50 - 150
Target Start/End: Original strand, 11635602 - 11635702
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| || || |||||||| ||||| | |||||||||||| || || || ||||| |||||||    
T  11635602 gcattgataggagcaacggtagccatggattgaccggctcctgctgacaccatccccacttccgcttctttcttcttgtggtgtccattaccatacctct 11635701  T
Q  150 t 150  Q
    |    
T  11635702 t 11635702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 50 - 150
Target Start/End: Original strand, 11641791 - 11641891
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| || || |||||||| ||||| | |||||||||||| || || || ||||| |||||||    
T  11641791 gcattgataggagcaacggtagccatggattgaccggctcctgctgacaccatccccacttccgcttctttcttcttgtggtgtccattaccatacctct 11641890  T
Q  150 t 150  Q
    |    
T  11641891 t 11641891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 32049614 - 32049526
Alignment:
Q  62 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctt 150  Q
    |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||| ||||| || || || ||||| ||||||||    
T  32049614 gcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttcttttttcttgtggtgtccattaccatacctctt 32049526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 31891689 - 31891742
Alignment:
Q  1 aggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 54  Q
    |||||||||| ||||||||||||||||||||||||||  || ||| ||||||||    
T  31891689 aggatgctgagagtattgcgcatacgggtacgacggaggtagctgagcagcatt 31891742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 189
Target Start/End: Original strand, 39052268 - 39052380
Alignment:
Q  77 gattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactt 176  Q
    |||||||||||||| || || ||||| || ||||| |||||||||||||| || || || ||||| || ||||| || |||||  | ||||||||| |||    
T  39052268 gattgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgacgcattcacagaggattcagctt 39052367  T
Q  177 tctcgaatacaat 189  Q
    |||| || |||||    
T  39052368 tctcaaacacaat 39052380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 3784533 - 3784481
Alignment:
Q  2 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 54  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  3784533 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 3784481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 16163478 - 16163426
Alignment:
Q  2 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 54  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  16163478 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 16163426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 27118567 - 27118515
Alignment:
Q  2 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 54  Q
    ||||||||| |||||||||||| |||||||||||||  || ||| ||||||||    
T  27118567 ggatgctgagagtattgcgcatgcgggtacgacggaggtagctgagcagcatt 27118515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 34156890 - 34156838
Alignment:
Q  2 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 54  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  34156890 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 34156838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 34303665 - 34303717
Alignment:
Q  2 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 54  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  34303665 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 34303717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 198; Significance: 1e-108; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 2 - 227
Target Start/End: Original strand, 16626920 - 16627144
Alignment:
Q  2 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacca 101  Q
    ||||||||| ||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16626920 ggatgctgagagtattgtgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacca 16627019  T
Q  102 tccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctct 201  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16627020 tccctacttctgtttctt-cttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctct 16627118  T
Q  202 gatagcttcttctagacgagtcccca 227  Q
    ||||||||||||||| ||||||||||    
T  16627119 gatagcttcttctaggcgagtcccca 16627144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 18530239 - 18530013
Alignment:
Q  1 aggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacc 100  Q
    |||||||||| |||||||||||||||||||||| |||  ||||||||||||||||||||||| ||||||||||||||||||||  | |||||||||||||    
T  18530239 aggatgctgagagtattgcgcatacgggtacgatggaggtaactgggcagcattaataggggtaacagtagccatggattgactagttccggcagatacc 18530140  T
Q  101 atccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  18530139 atccctacttctgtttctttcttcttatgatgaccgttaccgtatctctttgatgcatttacagaggattcaactttctcgaatacaataatgccttctc 18530040  T
Q  201 tgatagcttcttctagacgagtcccca 227  Q
    ||| |||||||||||||||||||||||    
T  18530039 tgacagcttcttctagacgagtcccca 18530013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 15893122 - 15893348
Alignment:
Q  1 aggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacc 100  Q
    |||||||||| ||||  ||||||| ||||||||||||   |  ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||    
T  15893122 aggatgctgagagtacggcgcatatgggtacgacggaggcatttgggcagcattgataggagcaacagtagccatggattgaccggctccggcagacacc 15893221  T
Q  101 atccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctc 200  Q
    ||||||||||| |||||||||||||| || || |||||||  |||||||||||||||||  | ||||||||| |||||||||| ||||| || |||||||    
T  15893222 atccctacttccgtttctttcttcttgtggtgtccgttactatacctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttctc 15893321  T
Q  201 tgatagcttcttctagacgagtcccca 227  Q
    ||| ||||||||| |||||||| ||||    
T  15893322 tgacagcttcttccagacgagttccca 15893348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 44 - 227
Target Start/End: Complemental strand, 8295774 - 8295591
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| || || || ||||| |    
T  8295774 tgggctgcattgataggagcaacagtagccatggattgaccggctccggcagacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 8295675  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtcccca 227  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || || ||  |||  |||||||| |||||||| ||||    
T  8295674 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccatccttgacggcttcttccagacgagttccca 8295591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 44 - 227
Target Start/End: Original strand, 8301723 - 8301906
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||||||||| ||||| |||||| |||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||| || || || ||||| |    
T  8301723 tgggcagcattgataggagcaacaatagccatggattgaccggctccggcagacaccatccatacttccgtttctttcttcttgtggtgtccattaccat 8301822  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtcccca 227  Q
    |||||||||| |||||  | ||||||||| |||||||||| ||||| || ||||| ||||  |||||||| |||||||| ||||    
T  8301823 acctctttgacgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcttccagacgagttccca 8301906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 44 - 203
Target Start/End: Original strand, 4797112 - 4797271
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  4797112 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 4797211  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctga 203  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||    
T  4797212 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctga 4797271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 44 - 227
Target Start/End: Original strand, 15741541 - 15741724
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || || || |    
T  15741541 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattgccat 15741640  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtcccca 227  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || || || ||||  |||||||| |||||||| ||||    
T  15741641 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcttccagacgagttccca 15741724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 44 - 203
Target Start/End: Complemental strand, 18051061 - 18050902
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  18051061 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 18050962  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctga 203  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||    
T  18050961 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctga 18050902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 4721424 - 4721285
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |||||||    
T  4721424 gcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctct 4721325  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | ||||||||  | ||||||||| |||||||||| |||||    
T  4721324 tcgatgcattcacagaggattcagctttctcgaacacaat 4721285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 35880559 - 35880420
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |||||||    
T  35880559 gcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctct 35880460  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | ||||||||  | ||||||||| |||||||||| |||||    
T  35880459 tcgatgcattcacagaggattcagctttctcgaacacaat 35880420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 44 - 189
Target Start/End: Original strand, 29149214 - 29149359
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||||| |||| |||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  29149214 tgggctgcattgataggagcaatagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 29149313  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    ||||||| ||||||||  | ||||||||| |||||||||| |||||    
T  29149314 acctcttcgatgcattcacagaggattcagctttctcgaacacaat 29149359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 50 - 182
Target Start/End: Complemental strand, 18330467 - 18330335
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |||||||    
T  18330467 gcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctct 18330368  T
Q  150 ttgatgcatttgcggaggattcaactttctcga 182  Q
    | ||||||||  | ||||||||| |||||||||    
T  18330367 tcgatgcattcacagaggattcagctttctcga 18330335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 6192109 - 6191970
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||||||||||||||||||  | || ||||||| |||||| |||||||||||||| || || || ||||| |||||||    
T  6192109 gcattgataggagcaacagtagccatggattgaccggctccaactgacaccatccatacttccgtttctttcttcttgtggtgtccattaccatacctct 6192010  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | ||||||||  | ||||||||| |||||||||| |||||    
T  6192009 tcgatgcattcacagaggattcagctttctcgaacacaat 6191970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 8211534 - 8211395
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  8211534 gcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 8211435  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | |||||| | || ||||| ||| ||||||| || |||||    
T  8211434 tcgatgcactcgcagaggactcagctttctcaaacacaat 8211395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 18277517 - 18277656
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||| ||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  18277517 gcattgataggagcaacagtggccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 18277616  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | ||||||||  | ||||||||| |||||||||| |||||    
T  18277617 tcgatgcattcacagaggattcagctttctcgaacacaat 18277656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 18292818 - 18292957
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||| ||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  18292818 gcattgataggagcaacagtggccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 18292917  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | ||||||||  | ||||||||| |||||||||| |||||    
T  18292918 tcgatgcattcacagaggattcagctttctcgaacacaat 18292957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 18308119 - 18308258
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||| ||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  18308119 gcattgataggagcaacagtggccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 18308218  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | ||||||||  | ||||||||| |||||||||| |||||    
T  18308219 tcgatgcattcacagaggattcagctttctcgaacacaat 18308258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 22871339 - 22871478
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  22871339 gcattgataggtgcaacagtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 22871438  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | |||||| | || ||||||||| ||||||| || |||||    
T  22871439 tcgatgcactcgcagaggattcagctttctcaaacacaat 22871478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 22886398 - 22886537
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  22886398 gcattgataggtgcaacagtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 22886497  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | |||||| | || ||||||||| ||||||| || |||||    
T  22886498 tcgatgcactcgcagaggattcagctttctcaaacacaat 22886537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 50 - 156
Target Start/End: Complemental strand, 5466778 - 5466672
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| ||||||||||||||||| || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  5466778 gcattgataggtgcaacagtagccatagattgaccggctccggctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 5466679  T
Q  150 ttgatgc 156  Q
    |||||||    
T  5466678 ttgatgc 5466672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 50 - 180
Target Start/End: Original strand, 5596831 - 5596961
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  5596831 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 5596930  T
Q  150 ttgatgcatttgcggaggattcaactttctc 180  Q
    | |||||| | || |||||||||||||||||    
T  5596931 tcgatgcactcgcagaggattcaactttctc 5596961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 50 - 192
Target Start/End: Complemental strand, 10395929 - 10395787
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  10395929 gcattgataggagcaacggtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 10395830  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaataat 192  Q
    | ||||||||  | ||||||||| ||||||| || ||||||||    
T  10395829 tcgatgcattcacagaggattcagctttctcaaacacaataat 10395787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 7073005 - 7072866
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||||||||||| |||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  7073005 gcattgataggagcaacagtagccatggattgactggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 7072906  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  7072905 tcgacgcattcacagaggattcagctttctcaaacacaat 7072866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 50 - 157
Target Start/End: Complemental strand, 18224984 - 18224877
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||||||||| |    
T  18224984 gcattgataggagcaacagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttt 18224885  T
Q  150 ttgatgca 157  Q
    | ||||||    
T  18224884 tcgatgca 18224877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 47023246 - 47023107
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  47023246 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 47023147  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | ||||||||  | ||||||||  ||||||| || |||||    
T  47023146 tcgatgcattcacagaggattcggctttctcaaacacaat 47023107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 50 - 192
Target Start/End: Original strand, 28116422 - 28116564
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  28116422 gcattgataggagcaacggtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 28116521  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaataat 192  Q
    | |||||| | |  || |||||| ||||||| || ||||||||    
T  28116522 tcgatgcactcgtagaagattcagctttctcaaacacaataat 28116564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 56 - 157
Target Start/End: Original strand, 4347155 - 4347256
Alignment:
Q  56 ataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatg 155  Q
    ||||| ||||||||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| ||||    
T  4347155 ataggagcaacagtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatg 4347254  T
Q  156 ca 157  Q
    ||    
T  4347255 ca 4347256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 50 - 203
Target Start/End: Original strand, 6542939 - 6543092
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  6542939 gcattgataggtgcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 6543038  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctga 203  Q
    | |||||| | |  || |||||| ||||||| || ||||| || || |||||||    
T  6543039 tcgatgcactcgtagaagattcagctttctcaaacacaatgatcccatctctga 6543092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 56 - 157
Target Start/End: Complemental strand, 28021065 - 28020964
Alignment:
Q  56 ataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatg 155  Q
    ||||| |||||||||||||||||||| |||||||| || || |||||||| ||||| ||||| |||||||| || || |||||||| |||||||||||||    
T  28021065 ataggagcaacagtagccatggattgcccggctccagctgacaccatccccacttccgtttccttcttcttgtggtgtccgttaccatacctctttgatg 28020966  T
Q  156 ca 157  Q
    ||    
T  28020965 ca 28020964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 62 - 157
Target Start/End: Complemental strand, 5013493 - 5013398
Alignment:
Q  62 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgca 157  Q
    |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||||||||| || ||||||    
T  5013493 gcaacagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgca 5013398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 62 - 157
Target Start/End: Original strand, 17985433 - 17985528
Alignment:
Q  62 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgca 157  Q
    ||||| ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||||||||| |||||||||    
T  17985433 gcaacggtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtacctttttgatgca 17985528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 18242520 - 18242381
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| |||||||| ||||||||||||||||| || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  18242520 gcattgataggagcaacggtagccattgattgaccggctccggctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 18242421  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  18242420 tcgacgcattcacagaggattcagctttctcaaacacaat 18242381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 20577327 - 20577466
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  20577327 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 20577426  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  20577427 tcgacgcattcacagaggattcagctttctcaaacacaat 20577466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 62 - 192
Target Start/End: Complemental strand, 7996343 - 7996213
Alignment:
Q  62 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttg 161  Q
    |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| || ||| | |    
T  7996343 gcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgaggcactcg 7996244  T
Q  162 cggaggattcaactttctcgaatacaataat 192  Q
    | || |||||| ||||||| || ||||||||    
T  7996243 cagaagattcagctttctcaaacacaataat 7996213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 62 - 192
Target Start/End: Complemental strand, 10642851 - 10642721
Alignment:
Q  62 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttg 161  Q
    |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| || ||| | |    
T  10642851 gcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgaggcactcg 10642752  T
Q  162 cggaggattcaactttctcgaatacaataat 192  Q
    | || |||||| ||||||| || ||||||||    
T  10642751 cagaagattcagctttctcaaacacaataat 10642721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 44 - 150
Target Start/End: Complemental strand, 20065845 - 20065739
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||||| |||||||| |||||||||||||||||||| || || |||||||| ||||| || ||||||||||| ||||| || ||||| |    
T  20065845 tgggctgcattgataggagcaacagtggccatggattgaccggctccagctgacaccatccccacttccgtatctttcttcttgtgatgtccattaccat 20065746  T
Q  144 acctctt 150  Q
    |||||||    
T  20065745 acctctt 20065739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 50 - 180
Target Start/End: Original strand, 36997554 - 36997684
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  36997554 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 36997653  T
Q  150 ttgatgcatttgcggaggattcaactttctc 180  Q
    | || |||||| | ||||||||| |||||||    
T  36997654 tcgacgcatttacagaggattcagctttctc 36997684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 50 - 180
Target Start/End: Complemental strand, 51781804 - 51781674
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  51781804 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 51781705  T
Q  150 ttgatgcatttgcggaggattcaactttctc 180  Q
    | || |||||| | ||||||||| |||||||    
T  51781704 tcgacgcatttacagaggattcagctttctc 51781674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 11110826 - 11110965
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| || || |||||||| ||||| ||||| |||||||| || || || ||||| || ||||    
T  11110826 gcattgataggagcaacggtagccatggattgaccggctccagctgacaccatccccacttccgtttccttcttcttgtggtgtccattaccatatctct 11110925  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  11110926 tcgacgcattcacagaggattcagctttctcaaacacaat 11110965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 21674486 - 21674347
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| || || |||||||||| |||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  21674486 gcattgataggagccacggtagccatgggttgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 21674387  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | ||||||||  | ||||||||| ||||||| || |||||    
T  21674386 tcgatgcattcacagaggattcagctttctcaaacacaat 21674347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 50 - 156
Target Start/End: Complemental strand, 4416709 - 4416603
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||| ||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  4416709 gcattgataggagcaacagtagtcattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 4416610  T
Q  150 ttgatgc 156  Q
    | |||||    
T  4416609 tcgatgc 4416603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 50 - 180
Target Start/End: Complemental strand, 24327952 - 24327822
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| ||||| |||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  24327952 gcattgataggagcaacagtagccattgattgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 24327853  T
Q  150 ttgatgcatttgcggaggattcaactttctc 180  Q
    | || |||||  | ||||||||| |||||||    
T  24327852 tcgacgcattcacagaggattcagctttctc 24327822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 50 - 156
Target Start/End: Complemental strand, 28339095 - 28338989
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| || || ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  28339095 gcattgataggagcgacggtagccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 28338996  T
Q  150 ttgatgc 156  Q
    | |||||    
T  28338995 tcgatgc 28338989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 50 - 156
Target Start/End: Original strand, 31964938 - 31965044
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| || || ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  31964938 gcattgataggagcgacggtagccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 31965037  T
Q  150 ttgatgc 156  Q
    | |||||    
T  31965038 tcgatgc 31965044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 50 - 156
Target Start/End: Original strand, 50134536 - 50134642
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| || || ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  50134536 gcattgataggagcgacggtagccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 50134635  T
Q  150 ttgatgc 156  Q
    | |||||    
T  50134636 tcgatgc 50134642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 5609787 - 5609890
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| || || ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  5609787 gcattgataggagcgacggtagccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 5609886  T
Q  150 ttga 153  Q
    ||||    
T  5609887 ttga 5609890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 50 - 180
Target Start/End: Complemental strand, 51796893 - 51796762
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatg-accgttaccgtacctc 148  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || ||  || ||||| || |||    
T  51796893 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtgccattaccatatctc 51796794  T
Q  149 tttgatgcatttgcggaggattcaactttctc 180  Q
    || || |||||| | ||||||||| |||||||    
T  51796793 ttcgacgcatttacagaggattcagctttctc 51796762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 29665450 - 29665526
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttctt 126  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| ||||||||||||||    
T  29665450 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttctt 29665526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 48465708 - 48465569
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| ||||| || |||||||||||||| || || ||||| || ||||| |||||||||||||| || || || ||||| || ||||    
T  48465708 gcattgataggagcaacggtagctattgattgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatatctct 48465609  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  48465608 tcgacgcattcacagaggattcagctttctcaaacacaat 48465569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 22387992 - 22388069
Alignment:
Q  2 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggat 79  Q
    ||||||||| ||||| | ||||| ||||| |||||    ||||| |||||||| ||||| ||||||||||||||||||    
T  22387992 ggatgctgagagtatggtgcataagggtaggacgggggaaactgagcagcattgataggagcaacagtagccatggat 22388069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 4625788 - 4625736
Alignment:
Q  2 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 54  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  4625788 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 4625736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 5652231 - 5652179
Alignment:
Q  2 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 54  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  5652231 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 5652179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 5713068 - 5713016
Alignment:
Q  2 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 54  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  5713068 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 5713016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 5723978 - 5723926
Alignment:
Q  2 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 54  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  5723978 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 5723926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 5757499 - 5757551
Alignment:
Q  2 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 54  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  5757499 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 5757551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 5768390 - 5768442
Alignment:
Q  2 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 54  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  5768390 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 5768442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 17994198 - 17994250
Alignment:
Q  2 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 54  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  17994198 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 17994250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 194; Significance: 1e-105; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 2 - 227
Target Start/End: Complemental strand, 20292 - 20067
Alignment:
Q  2 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacca 101  Q
    ||||||||| ||||| ||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20292 ggatgctgagagtatggcgcatatgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacca 20193  T
Q  102 tccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctct 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20192 tccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaacacaataatgccttctct 20093  T
Q  202 gatagcttcttctagacgagtcccca 227  Q
    || |||||||||||| ||||||||||    
T  20092 gacagcttcttctaggcgagtcccca 20067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 44 - 227
Target Start/End: Complemental strand, 30291 - 30108
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||| ||| |||||||||||||| || || || ||||| |    
T  30291 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctatttccgtttctttcttcttgtggtgtccattaccat 30192  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtcccca 227  Q
    ||||| | ||||||||  | ||||||||  |||||||||| ||||| || || || ||||  |||||||| |||||||| ||||    
T  30191 acctcctcgatgcattcacagaggattcggctttctcgaacacaatgattccatccctgacggcttcttccagacgagttccca 30108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 194; Significance: 1e-105; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 2 - 227
Target Start/End: Complemental strand, 15227768 - 15227543
Alignment:
Q  2 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacca 101  Q
    ||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  15227768 ggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatggattgaccagctccggcagatacca 15227669  T
Q  102 tccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctct 201  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15227668 tccctacttctgtttctttcttcttatgatgaccgttaccatgcctctttgatgcatttgcggaggattcatctttctcgaatacaataatgccttctct 15227569  T
Q  202 gatagcttcttctagacgagtcccca 227  Q
    || |||||||||||||||||||||||    
T  15227568 gacagcttcttctagacgagtcccca 15227543  T

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Target: chr4; HSP #2
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 15285300 - 15285526
Alignment:
Q  1 aggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacc 100  Q
    |||||||||| ||||||||||||| |||||| | |||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  15285300 aggatgctgagagtattgcgcatatgggtacaatggaggtaactgggcagcattaataggggcaacagtagccatggattgaccagctccggcagatacc 15285399  T
Q  101 atccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctc 200  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15285400 atccatacttctgtttctttcttcttatgatgaccgttaccgttcctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctc 15285499  T
Q  201 tgatagcttcttctagacgagtcccca 227  Q
    ||| |||||||||||| ||||||||||    
T  15285500 tgacagcttcttctaggcgagtcccca 15285526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 2 - 227
Target Start/End: Complemental strand, 1900155 - 1899930
Alignment:
Q  2 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacca 101  Q
    ||||||||| ||||| ||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1900155 ggatgctgagagtatggcgcatatgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacca 1900056  T
Q  102 tccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctct 201  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||    
T  1900055 tccctacttctgtttctttcttcttatgatgatcgttaccgtacctctttgatgcatttacagaggattcaactttctcaaatacaataatgccttctct 1899956  T
Q  202 gatagcttcttctagacgagtcccca 227  Q
    || ||||||||| | |||||||||||    
T  1899955 gacagcttcttccaaacgagtcccca 1899930  T

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Target: chr4; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 14235900 - 14236114
Alignment:
Q  1 aggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacc 100  Q
    |||||||||| ||||||||  |||| |||||| | ||  |||||| |||||||||||||||| |||||| ||||||||||||| || |||||||||||||    
T  14235900 aggatgctgagagtattgcatatactggtacggcagaggtaactgagcagcattaataggggtaacagtggccatggattgactggttccggcagatacc 14235999  T
Q  101 atccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctc 200  Q
    |||||||||||||| |||||||||||||||||||| ||||||||| |||||||||   |||| ||||||||  |||||||||| ||||||||| ||||||    
T  14236000 atccctacttctgtctctttcttcttatgatgaccattaccgtacttctttgatgtgcttgcagaggattcccctttctcgaacacaataatgtcttctc 14236099  T
Q  201 tgatagcttcttcta 215  Q
    ||| ||| |||||||    
T  14236100 tgacagcctcttcta 14236114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 44 - 227
Target Start/End: Complemental strand, 14664871 - 14664688
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||||||||| ||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||| || || || ||||| |    
T  14664871 tgggcagcattgataggagcaacagtagccatggattgaccagctccggcagacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 14664772  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtcccca 227  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| || |  ||||| || |||||||| ||||    
T  14664771 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctaacggcttcctccagacgagttccca 14664688  T

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Target: chr4; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 64 - 215
Target Start/End: Original strand, 15391771 - 15391922
Alignment:
Q  64 aacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcg 163  Q
    |||||||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||||||||||||| || || ||| || |||||||||||||     
T  15391771 aacagtagccatggattgactggttccagcagataccatccctacttctgtctctttcttcttatgatgaccattgccatacttccttgatgcatttgca 15391870  T
Q  164 gaggattcaactttctcgaatacaataatgccttctctgatagcttcttcta 215  Q
    ||||||||| ||||| | || ||||||||||| ||||||| ||| |||||||    
T  15391871 gaggattcacctttcccaaacacaataatgccatctctgacagcctcttcta 15391922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 44 - 203
Target Start/End: Complemental strand, 17013853 - 17013694
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| |||||||| || |||||||||||||| |||||||||||||| || || || ||||| |    
T  17013853 tgggctgcattgataggagcaacagtagccatggattgaccagctccggctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 17013754  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctga 203  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||    
T  17013753 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctga 17013694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 50 - 219
Target Start/End: Original strand, 24592735 - 24592904
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||| ||| |||||||||||||| || || || ||||| |||||||    
T  24592735 gcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctatttccgtttctttcttcttgtggtgtccattaccatacctct 24592834  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacg 219  Q
    | ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  |||||||| |||||    
T  24592835 tcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcttccagacg 24592904  T

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Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 14763728 - 14763867
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||| ||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  14763728 gcattgataggagcaacagtggccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 14763827  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | ||||||||  | ||||||||| |||||||||| |||||    
T  14763828 tcgatgcattcacagaggattcagctttctcgaacacaat 14763867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 36344936 - 36345075
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||| ||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  36344936 gcattgataggagcaacagtggccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 36345035  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | ||||||||  | ||||||||| |||||||||| |||||    
T  36345036 tcgatgcattcacagaggattcagctttctcgaacacaat 36345075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 6569700 - 6569561
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||| ||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  6569700 gcattgataggagcaacagtggccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 6569601  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | |||||||| || ||||||||| ||||||| || |||||    
T  6569600 tcgatgcattcgcagaggattcagctttctcaaacacaat 6569561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 14098388 - 14098249
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  14098388 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 14098289  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | || |||||| | ||||||||| ||||||| || |||||    
T  14098288 tcgacgcatttacagaggattcagctttctcaaacacaat 14098249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 19373108 - 19372969
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  19373108 gcattgataggagcaacggtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 19373009  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | ||||||||  | ||||||||| ||||||| || |||||    
T  19373008 tcgatgcattcacagaggattcagctttctcaaacacaat 19372969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 50 - 157
Target Start/End: Original strand, 31126942 - 31127049
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  31126942 gcattgataggagcaacagtagccattgattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatacctct 31127041  T
Q  150 ttgatgca 157  Q
    | ||||||    
T  31127042 tcgatgca 31127049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 62 - 157
Target Start/End: Original strand, 27163753 - 27163848
Alignment:
Q  62 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgca 157  Q
    |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||||||||| || ||||||    
T  27163753 gcaacagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgca 27163848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 157
Target Start/End: Complemental strand, 30753589 - 30753482
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || | |||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  30753589 gcattgataggtgcaacagtagccatggattgaccggctccagctgacatcatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 30753490  T
Q  150 ttgatgca 157  Q
    | ||||||    
T  30753489 tcgatgca 30753482  T

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Target: chr4; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 54833237 - 54833098
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||| |||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  54833237 gcattgataggagcaacagtggccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 54833138  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | || ||| | || || |||||| ||||||| || |||||    
T  54833137 tcgacgcactcgcagaagattcagctttctcaaacacaat 54833098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 50 - 180
Target Start/End: Original strand, 18801046 - 18801176
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| | |||||||||||| || || |||||||| |||||||||||||||||||| || || || ||||| || ||||    
T  18801046 gcattgataggtgcaacagtagccatagcttgaccggctccagctgacaccatccccacttctgtttctttcttcttgtggtgtccattaccatatctct 18801145  T
Q  150 ttgatgcatttgcggaggattcaactttctc 180  Q
    | || |||||  | ||||||||| |||||||    
T  18801146 tcgacgcattcacagaggattcagctttctc 18801176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 50 - 180
Target Start/End: Original strand, 33674234 - 33674364
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  33674234 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 33674333  T
Q  150 ttgatgcatttgcggaggattcaactttctc 180  Q
    | || |||||| | ||||||||| |||||||    
T  33674334 tcgacgcatttacagaggattcagctttctc 33674364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 50 - 227
Target Start/End: Original strand, 40106062 - 40106239
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || |  ||||||||||| |    
T  40106062 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtctattaccgtaccttt 40106161  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtcccca 227  Q
    | |||||| | |  || |||||| ||||||| || ||||| || || || ||||  ||||| || ||||| |||||||    
T  40106162 tcgatgcactcgtagaagattcagctttctcaaacacaatgattccatccctgactgcttcctcaagacgggtcccca 40106239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 5005705 - 5005617
Alignment:
Q  62 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctt 150  Q
    ||||| ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| ||||||||    
T  5005705 gcaacggtagccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctctt 5005617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 62 - 157
Target Start/End: Complemental strand, 21969536 - 21969441
Alignment:
Q  62 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgca 157  Q
    |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||| ||||| || || || ||||| |||||||| ||||||    
T  21969536 gcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttcttttttcttgtggtgtccattaccatacctcttcgatgca 21969441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 39850470 - 39850331
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || ||||| || ||||| |||||||||||||| || || || ||||| || ||||    
T  39850470 gcattgataggtgcaacagtagccattgattgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatatctct 39850371  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | || | |||  | ||||||||| ||||||| || |||||    
T  39850370 tcgacgtattcacagaggattcagctttctcaaacacaat 39850331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 24460978 - 24461030
Alignment:
Q  2 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 54  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  24460978 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 24461030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 190; Significance: 1e-103; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 2 - 227
Target Start/End: Complemental strand, 16041207 - 16040982
Alignment:
Q  2 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacca 101  Q
    ||||||||| ||||| ||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16041207 ggatgctgagagtatggcgcatatgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacca 16041108  T
Q  102 tccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctct 201  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16041107 tccctacttctgtttctttcttcttatgatgaccgttaccatacctctttgatgcatttacggaggattcaactttctcgaatacaataatgccttctct 16041008  T
Q  202 gatagcttcttctagacgagtcccca 227  Q
    || |||||||||||||||||| ||||    
T  16041007 gacagcttcttctagacgagttccca 16040982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 2 - 227
Target Start/End: Original strand, 16450257 - 16450482
Alignment:
Q  2 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacca 101  Q
    ||||||||| |||| ||||| |||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  16450257 ggatgctgagagtactgcgcgtacgggtacgacggaggtaactgggcagcattaataggggcaacagtagctatggattgaccggctccggcagatacca 16450356  T
Q  102 tccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctct 201  Q
    ||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  16450357 tccctacttttgtttctttcttcttatgatgaccgttaccgtatctttttgatgcatttacagaggattcaactttctcgaatacaataatgccttctct 16450456  T
Q  202 gatagcttcttctagacgagtcccca 227  Q
    || |||||||||||||||||||||||    
T  16450457 gacagcttcttctagacgagtcccca 16450482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 16518677 - 16518903
Alignment:
Q  1 aggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacc 100  Q
    |||||||||| ||||  ||||||| ||||| ||||||   |  ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  16518677 aggatgctgagagtacggcgcatatgggtatgacggaggcatttgggcagcattaataggagcaacagtagccatggattgaccggctccggcagacacc 16518776  T
Q  101 atccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctc 200  Q
    ||||||||||| |||||||||||||| || || |||||||| |||||||||||||||||| | ||||||||| |||| ||||| ||||| || |||||||    
T  16518777 atccctacttccgtttctttcttcttgtggtgtccgttaccatacctctttgatgcatttacagaggattcagctttttcgaacacaatgattccttctc 16518876  T
Q  201 tgatagcttcttctagacgagtcccca 227  Q
    |||  |||||||| |||||||| ||||    
T  16518877 tgacggcttcttccagacgagttccca 16518903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 16503641 - 16503867
Alignment:
Q  1 aggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacc 100  Q
    |||||||||| ||||  ||||||| ||||| ||||||   |  ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  16503641 aggatgctgagagtacggcgcatatgggtatgacggaggcatttgggcagcattaataggagcaacagtagccatggattgaccggctccggcagacacc 16503740  T
Q  101 atccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctc 200  Q
    ||||||||||| |||||||||||||| || || |||||||| |||||||||||||||||  | ||||||||| |||| ||||| ||||| || |||||||    
T  16503741 atccctacttccgtttctttcttcttgtggtgtccgttaccatacctctttgatgcattcacagaggattcagctttttcgaacacaatgattccttctc 16503840  T
Q  201 tgatagcttcttctagacgagtcccca 227  Q
    |||  |||||||| |||||||| ||||    
T  16503841 tgacggcttcttccagacgagttccca 16503867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 44 - 227
Target Start/End: Complemental strand, 2154412 - 2154229
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  2154412 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 2154313  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtcccca 227  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| ||  | || ||||  |||||||| |||||||| ||||    
T  2154312 acctctttgatgcattcacagaggattcagctttctcgaacacaatgatttcatccctgacggcttcttccagacgagttccca 2154229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 44 - 189
Target Start/End: Original strand, 10917169 - 10917314
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  10917169 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 10917268  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    ||||||||||||||||  | ||||||||| ||||||| || |||||    
T  10917269 acctctttgatgcattcacagaggattcagctttctcaaacacaat 10917314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 51 - 189
Target Start/End: Original strand, 11425087 - 11425225
Alignment:
Q  51 cattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctt 150  Q
    |||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| ||||||||    
T  11425087 cattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctctt 11425186  T
Q  151 tgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
     ||||||||  | ||||||||| |||||||||| |||||    
T  11425187 cgatgcattcacagaggattcagctttctcgaacacaat 11425225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 5127825 - 5127686
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |||||||    
T  5127825 gcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctct 5127726  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | ||||||||  | ||||| ||| |||||||||| |||||    
T  5127725 tcgatgcattcacagaggactcagctttctcgaacacaat 5127686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 50 - 192
Target Start/End: Complemental strand, 45387176 - 45387034
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  45387176 gcattgataggagcaacagtagccattgattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatacctct 45387077  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaataat 192  Q
    | || ||| |||| || |||||| ||||||| || ||||||||    
T  45387076 tcgacgcacttgcagaagattcagctttctcaaacacaataat 45387034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 31124744 - 31124605
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| || ||||    
T  31124744 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatatctct 31124645  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | |||||||| || ||||||||| ||||||| || |||||    
T  31124644 tcgatgcattcgcagaggattcagctttctcaaacacaat 31124605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 5147650 - 5147789
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||  ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  5147650 gcattgataggagcaatggtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 5147749  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | |||||||| || || |||||| ||||||| || |||||    
T  5147750 tcgatgcattcgcagaagattcagctttctcaaacacaat 5147789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 9618484 - 9618345
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  9618484 gcattgataggagcaacagtagccattgattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctct 9618385  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  9618384 tcgatgcactcacagaggattcagctttctcaaacacaat 9618345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 24592851 - 24592990
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  24592851 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 24592950  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | || |||||| | ||||||||| ||||||| || |||||    
T  24592951 tcgacgcatttacagaggattcagctttctcaaacacaat 24592990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 50 - 157
Target Start/End: Original strand, 26275404 - 26275511
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || |||||||||||||    
T  26275404 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtacctct 26275503  T
Q  150 ttgatgca 157  Q
    | ||||||    
T  26275504 tcgatgca 26275511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 50 - 156
Target Start/End: Original strand, 4145433 - 4145539
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  4145433 gcattgataggagcaacagtagccattgattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatacctct 4145532  T
Q  150 ttgatgc 156  Q
    | |||||    
T  4145533 tcgatgc 4145539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 50 - 155
Target Start/End: Original strand, 26320179 - 26320284
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || |||||||||||||    
T  26320179 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtacctct 26320278  T
Q  150 ttgatg 155  Q
    | ||||    
T  26320279 tcgatg 26320284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 157
Target Start/End: Complemental strand, 3445127 - 3445020
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  3445127 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 3445028  T
Q  150 ttgatgca 157  Q
    | ||||||    
T  3445027 tcgatgca 3445020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 16736770 - 16736909
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  16736770 gcattgataggagcaacggtagccatggattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctct 16736869  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | || ||| | || || |||||| ||||||| || |||||    
T  16736870 tcgacgcactcgcagaagattcagctttctcaaacacaat 16736909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 16751824 - 16751963
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  16751824 gcattgataggagcaacggtagccatggattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctct 16751923  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | || ||| | || || |||||| ||||||| || |||||    
T  16751924 tcgacgcactcgcagaagattcagctttctcaaacacaat 16751963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 17523365 - 17523226
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  17523365 gcattgataggagcaacggtagccatggattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctct 17523266  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | || ||| | || || |||||| ||||||| || |||||    
T  17523265 tcgacgcactcgcagaagattcagctttctcaaacacaat 17523226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 17529850 - 17529989
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  17529850 gcattgataggagcaacggtagccatggattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctct 17529949  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | || ||| | || || |||||| ||||||| || |||||    
T  17529950 tcgacgcactcgcagaagattcagctttctcaaacacaat 17529989  T

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Target: chr7; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 50 - 180
Target Start/End: Complemental strand, 11441393 - 11441263
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  11441393 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 11441294  T
Q  150 ttgatgcatttgcggaggattcaactttctc 180  Q
    | || |||||| | ||||||||| |||||||    
T  11441293 tcgacgcatttacagaggattcagctttctc 11441263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 50 - 157
Target Start/End: Original strand, 26486054 - 26486161
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| ||||| || |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  26486054 gcattgataggagcaacggtagctattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 26486153  T
Q  150 ttgatgca 157  Q
    | ||||||    
T  26486154 tcgatgca 26486161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 26670224 - 26670363
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| ||||| || |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  26670224 gcattgataggagcaacggtagctattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 26670323  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  26670324 tcgatgcactcacagaggattcagctttctcaaacacaat 26670363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 50 - 157
Target Start/End: Original strand, 31564709 - 31564816
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  31564709 gcattgataggagcaacggtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 31564808  T
Q  150 ttgatgca 157  Q
    | ||||||    
T  31564809 tcgatgca 31564816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 26538183 - 26538322
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| ||||| || |||||||||||||| || || ||||| || ||||| |||||||||||||| || || || ||||| || ||||    
T  26538183 gcattgataggagcaacggtagctattgattgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatatctct 26538282  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  26538283 tcgacgcattcacagaggattcagctttctcaaacacaat 26538322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 26435084 - 26435014
Alignment:
Q  56 ataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttctt 126  Q
    ||||| |||||||| |||||||| ||||||||||| || || |||||||| ||||| ||||||||||||||    
T  26435084 ataggagcaacagtggccatggactgaccggctcctgctgacaccatccccacttccgtttctttcttctt 26435014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 31088723 - 31088775
Alignment:
Q  2 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 54  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  31088723 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 31088775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 45733344 - 45733292
Alignment:
Q  2 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 54  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  45733344 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 45733292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 187; Significance: 1e-101; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 20460988 - 20460762
Alignment:
Q  1 aggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacc 100  Q
    |||||||||| ||||||||||||||||||||| ||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20460988 aggatgctgagagtattgcgcatacgggtacggcggaggtaactgggcagcattaataggggcaatagtagccatggattgaccggctccggcagatacc 20460889  T
Q  101 atccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctc 200  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  20460888 atccctacttctatttctttcttcttatgatgaccgttaccgtacctctttgatgcattggcggaggattcaactttctcgaatataataatgccttctc 20460789  T
Q  201 tgatagcttcttctagacgagtcccca 227  Q
    ||| |||||||||||| ||||||||||    
T  20460788 tgacagcttcttctaggcgagtcccca 20460762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 16208400 - 16208626
Alignment:
Q  1 aggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacc 100  Q
    |||||||||| ||||||||   ||| | |||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16208400 aggatgctgagagtattgcatgtactgatacggcggaggtaactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacc 16208499  T
Q  101 atccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctc 200  Q
    ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||| |||||||||||||||||||    
T  16208500 atctctacttctgtttctttcttcttatgatgaccgttaccgtaactctttgatgcatttacagaggattcaactttctcaaatacaataatgccttctc 16208599  T
Q  201 tgatagcttcttctagacgagtcccca 227  Q
    ||| |||||||||||||||||||||||    
T  16208600 tgacagcttcttctagacgagtcccca 16208626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 10962501 - 10962362
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  10962501 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 10962402  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | ||||||||  | ||||||||| ||||||| || |||||    
T  10962401 tcgatgcattcacagaggattcagctttctcaaacacaat 10962362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 44 - 157
Target Start/End: Original strand, 41793726 - 41793839
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||||| ||||| ||||||||||||||||||||||| || |||||||| || ||||| |||||||||||||| || || || ||||| |    
T  41793726 tgggctgcattgataggagcaacggtagccatggattgaccggctccagctgataccattcccacttccgtttctttcttcttgtggtgtccattaccat 41793825  T
Q  144 acctctttgatgca 157  Q
    ||||||||||||||    
T  41793826 acctctttgatgca 41793839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 51638049 - 51637910
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  51638049 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 51637950  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | || ||| |||| || |||||| ||||||| || |||||    
T  51637949 tcgacgcacttgcagaagattcagctttctcaaacacaat 51637910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 50 - 180
Target Start/End: Complemental strand, 28584812 - 28584682
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| ||||| |||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  28584812 gcattgataggagcaacagtagccattgattgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 28584713  T
Q  150 ttgatgcatttgcggaggattcaactttctc 180  Q
    | || |||||  | ||||||||| |||||||    
T  28584712 tcgacgcattcacagaggattcagctttctc 28584682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 20340708 - 20340760
Alignment:
Q  2 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 54  Q
    ||||||||| |||||||||| |||||||||||||||  || ||| ||||||||    
T  20340708 ggatgctgagagtattgcgcgtacgggtacgacggaggtagctgagcagcatt 20340760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 155; Significance: 2e-82; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 23892096 - 23891870
Alignment:
Q  1 aggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacc 100  Q
    |||||||||| ||||  ||||||| ||||||||||||   |  ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  23892096 aggatgctgagagtacggcgcatatgggtacgacggaggcatttgggcagcattaataggagcaacagtagccatggattgatcggctccggcagatacc 23891997  T
Q  101 atccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctc 200  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||    
T  23891996 atccctacttctgtttctttcttcttatgatgtccgttaccatacctctttgatgcattcacggaggattcaactttctcgaatacaataattccttctc 23891897  T
Q  201 tgatagcttcttctagacgagtcccca 227  Q
    ||| ||||||||| |||||||||||||    
T  23891896 tgacagcttcttccagacgagtcccca 23891870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 25198922 - 25198696
Alignment:
Q  1 aggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacc 100  Q
    |||||||||| ||||  ||||||| ||||||||||||   || |||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  25198922 aggatgctgagagtacggcgcatatgggtacgacggaggcaattgggaagcattaataggagcaacagtagccatggattgaccggctccggcggatacc 25198823  T
Q  101 atccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctc 200  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||    
T  25198822 atccctacttctgtttccttcttcttatgatgtccgttaccgtacctctttgatgcattcacggaggattcaactttctcgaatacaataattccttctc 25198723  T
Q  201 tgatagcttcttctagacgagtcccca 227  Q
    ||| ||||||||| ||| |||||||||    
T  25198722 tgacagcttcttccagatgagtcccca 25198696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 46 - 227
Target Start/End: Complemental strand, 24951955 - 24951774
Alignment:
Q  46 ggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtac 145  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| || || |||||||| |||    
T  24951955 ggcagcattgataggagcaacagtagccatggattgaccggctccggcagacaccatccctacttccgtttctttcttcttgtggtgtccgttaccatac 24951856  T
Q  146 ctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtcccca 227  Q
    ||||||||||||||  | ||||||||| |||||||||| ||||| || ||||||||||  |||||||| |||||||| ||||    
T  24951855 ctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttctctgacggcttcttccagacgagttccca 24951774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 44 - 227
Target Start/End: Original strand, 24688472 - 24688655
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| || || || ||||| |    
T  24688472 tgggctgcattgataggagcaacagtagccatggattgaccggctccggcagacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 24688571  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtcccca 227  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||||||||  |||||||| |||||||| ||||    
T  24688572 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttctctgacggcttcttccagacgagttccca 24688655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 44 - 227
Target Start/End: Complemental strand, 30934483 - 30934300
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||||| |||||||||| ||||||||| |||||||||| ||| |||||||||||||| |||||||||||||| || || || ||||| |    
T  30934483 tgggctgcattgataggagcaacagtagtcatggattggccggctccggtagacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 30934384  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtcccca 227  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  |||||||| |||||||| ||||    
T  30934383 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcttccagacgagttccca 30934300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 44 - 227
Target Start/End: Original strand, 23752765 - 23752948
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  23752765 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 23752864  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtcccca 227  Q
    ||||||| ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  |||||||| |||||||| ||||    
T  23752865 acctcttcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcttccagacgagttccca 23752948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 44 - 189
Target Start/End: Complemental strand, 11549201 - 11549056
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  11549201 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 11549102  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    ||||||| ||||||||  | ||||||||| |||||||||| |||||    
T  11549101 acctcttcgatgcattcacagaggattcagctttctcgaacacaat 11549056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 44 - 189
Target Start/End: Original strand, 23718303 - 23718448
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  23718303 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 23718402  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    ||||||| ||||||||  | ||||||||| |||||||||| |||||    
T  23718403 acctcttcgatgcattcacagaggattcagctttctcgaacacaat 23718448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 44 - 189
Target Start/End: Original strand, 22999429 - 22999574
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||| ||| |||||||||||||| || || || ||||| |    
T  22999429 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctatttccgtttctttcttcttgtggtgtccattaccat 22999528  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    ||||||| ||||||||  | ||||||||| |||||||||| |||||    
T  22999529 acctcttcgatgcattcacagaggattcagctttctcgaacacaat 22999574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 33777328 - 33777189
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||||||||||||||||||||| ||||| || || |||||||||||||| |||||||||||||| || || || ||||| |||||||    
T  33777328 gcattgataggagcaacagtagccatggattgaccagctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctct 33777229  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | ||||||||  | ||||||||| |||||||||| |||||    
T  33777228 tcgatgcattcacagaggattcagctttctcgaacacaat 33777189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 15659081 - 15659220
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  15659081 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 15659180  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | ||||||||  | ||||||||| |||||||||| |||||    
T  15659181 tcgatgcattcacagaggattcagctttctcgaacacaat 15659220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 44 - 189
Target Start/End: Complemental strand, 2510898 - 2510753
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||||| ||||| ||||||||||||||||||||||| || |||||||| || ||||| |||||||||||||| || || || ||||| |    
T  2510898 tgggctgcattgataggagcaacggtagccatggattgaccggctccagctgataccattcccacttccgtttctttcttcttgtggtgtccattaccat 2510799  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    |||||||||||||| |  | ||||||||| ||||||| || |||||    
T  2510798 acctctttgatgcactcacagaggattcagctttctcaaacacaat 2510753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 50 - 219
Target Start/End: Original strand, 40473873 - 40474042
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| |||||||||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || |||||||| ||||    
T  40473873 gcattgataggggcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtatctct 40473972  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacg 219  Q
    | || |||||  | ||||||||| ||||||| || ||||| || || || ||||  |||||||| |||||    
T  40473973 tcgacgcattcacagaggattcagctttctcaaacacaatgattccatccctgacggcttcttcaagacg 40474042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 9317292 - 9317153
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  9317292 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 9317193  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    |||||||| |  | ||||||||| ||||||| || |||||    
T  9317192 ttgatgcactcacagaggattcagctttctcaaacacaat 9317153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 6874143 - 6874004
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||| ||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  6874143 gcattgataggagcaacagtagtcattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 6874044  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    |||||||| |  | ||||||||| ||||||| || |||||    
T  6874043 ttgatgcactcacagaggattcagctttctcaaacacaat 6874004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 50 - 157
Target Start/End: Complemental strand, 12131996 - 12131889
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || |||||||||||||    
T  12131996 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtacctct 12131897  T
Q  150 ttgatgca 157  Q
    | ||||||    
T  12131896 tcgatgca 12131889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 22888362 - 22888287
Alignment:
Q  2 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatgg 77  Q
    ||||||||| ||||| ||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  22888362 ggatgctgagagtatggcgcatatgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgg 22888287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 50 - 157
Target Start/End: Complemental strand, 24681278 - 24681171
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  24681278 gcattgataggtgcaacagtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 24681179  T
Q  150 ttgatgca 157  Q
    | ||||||    
T  24681178 tcgatgca 24681171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 50 - 157
Target Start/End: Complemental strand, 24723805 - 24723698
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  24723805 gcattgataggtgcaacagtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 24723706  T
Q  150 ttgatgca 157  Q
    | ||||||    
T  24723705 tcgatgca 24723698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 50 - 157
Target Start/End: Original strand, 37771320 - 37771427
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  37771320 gcattgataggtgcaacagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 37771419  T
Q  150 ttgatgca 157  Q
    | ||||||    
T  37771420 tcgatgca 37771427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 50 - 156
Target Start/End: Original strand, 8665796 - 8665902
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  8665796 gcattgataggagcaacagtagccattgattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatacctct 8665895  T
Q  150 ttgatgc 156  Q
    | |||||    
T  8665896 tcgatgc 8665902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 50 - 192
Target Start/End: Original strand, 15759178 - 15759320
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||| ||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  15759178 gcattgataggagcaacagtagccattgattgacctgctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatacctct 15759277  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaataat 192  Q
    | || ||| |||| || |||||| ||||||| || ||||||||    
T  15759278 tcgacgcacttgcagaagattcagctttctcaaacacaataat 15759320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 56 - 189
Target Start/End: Original strand, 9548870 - 9549003
Alignment:
Q  56 ataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatg 155  Q
    ||||| |||||||| |||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| ||||    
T  9548870 ataggagcaacagtggccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatg 9548969  T
Q  156 catttgcggaggattcaactttctcgaatacaat 189  Q
    || |  | ||||||||| ||||||| || |||||    
T  9548970 cactcacagaggattcagctttctcaaacacaat 9549003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 50 - 203
Target Start/End: Original strand, 37358976 - 37359129
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  37358976 gcattgataggagcaacggtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 37359075  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctga 203  Q
    | |||||| | |  || |||||| ||||||| |||||||| || || |||||||    
T  37359076 tcgatgcactcgtagaagattcagctttctcaaatacaatgatcccatctctga 37359129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 56 - 180
Target Start/End: Complemental strand, 41674544 - 41674420
Alignment:
Q  56 ataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatg 155  Q
    ||||| ||||||||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| || |    
T  41674544 ataggagcaacagtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgacg 41674445  T
Q  156 catttgcggaggattcaactttctc 180  Q
    ||||  | ||||||||  |||||||    
T  41674444 cattcacagaggattcggctttctc 41674420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 5637751 - 5637612
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  5637751 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 5637652  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  5637651 tcgatgcactcacagaggattcagctttctcaaacacaat 5637612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 62 - 157
Target Start/End: Original strand, 18375745 - 18375840
Alignment:
Q  62 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgca 157  Q
    |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||||||||| || ||||||    
T  18375745 gcaacagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgca 18375840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 18501069 - 18501208
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  18501069 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 18501168  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  18501169 tcgacgcattcacagaggattcagctttctcaaacacaat 18501208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 26480233 - 26480094
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  26480233 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatatctct 26480134  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  26480133 tcgatgcactcacagaggattcagctttctcaaacacaat 26480094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 62 - 157
Target Start/End: Complemental strand, 30151847 - 30151752
Alignment:
Q  62 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgca 157  Q
    |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||||||||| || ||||||    
T  30151847 gcaacagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgca 30151752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 62 - 189
Target Start/End: Complemental strand, 30168298 - 30168171
Alignment:
Q  62 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttg 161  Q
    |||| |||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| || ||||| |||||| |      
T  30168298 gcaatagtagccatggattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctcttcgatgcactca 30168199  T
Q  162 cggaggattcaactttctcgaatacaat 189  Q
    | ||||||||| ||||||| || |||||    
T  30168198 cagaggattcagctttctcaaacacaat 30168171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 31431269 - 31431130
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||  |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  31431269 gcattgataggagcaacagtagccacagattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 31431170  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  31431169 tcgatgcactcacagaggattcagctttctcaaacacaat 31431130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 157
Target Start/End: Original strand, 31826740 - 31826847
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  31826740 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 31826839  T
Q  150 ttgatgca 157  Q
    | ||||||    
T  31826840 tcgatgca 31826847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 157
Target Start/End: Original strand, 37671813 - 37671920
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| |||||||| ||||||||||||||||| || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  37671813 gcattgataggagcaacggtagccatagattgaccggctccggctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 37671912  T
Q  150 ttgatgca 157  Q
    | ||||||    
T  37671913 tcgatgca 37671920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 37754809 - 37754670
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  37754809 gcattgataggtgcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 37754710  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | || ||| |||| || |||||| ||||||| || |||||    
T  37754709 tcgacgcacttgcagaagattcagctttctcaaacacaat 37754670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 44 - 189
Target Start/End: Complemental strand, 34616368 - 34616223
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||||| |||||||||||||| | |||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |    
T  34616368 tgggctgcattgataggtgcaacagtagccatagcttgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccat 34616269  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | ||||| |||||| |  | ||||||||| ||||||| || |||||    
T  34616268 atctcttcgatgcactcacagaggattcagctttctcaaacacaat 34616223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 3789367 - 3789228
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  3789367 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 3789268  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  3789267 tcgatgcactcacagaggattcagctttctcaaacacaat 3789228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 62 - 157
Target Start/End: Complemental strand, 33516185 - 33516090
Alignment:
Q  62 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgca 157  Q
    ||||| ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| ||||||    
T  33516185 gcaacggtagccatggattgaccggctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatacctcttcgatgca 33516090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 157
Target Start/End: Original strand, 32599784 - 32599897
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||||| |||||||||| ||| |||||||||||||| || || |||||||| ||||| ||||| |||||||| || || || ||||| |    
T  32599784 tgggctgcattgataggagcaacagtagtcattgattgaccggctccagctgacaccatccccacttccgtttccttcttcttgtggtgtccattaccat 32599883  T
Q  144 acctctttgatgca 157  Q
    ||||||| ||||||    
T  32599884 acctcttcgatgca 32599897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 13325165 - 13325304
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| |||||||| |||||||| ||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  13325165 gcattgataggagcaacggtagccattgattgaccagctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 13325264  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  13325265 tcgatgcactcacagaggattcagctttctcaaacacaat 13325304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 43078090 - 43077951
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| | |||||||||||| |  || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  43078090 gcattgataggtgcaacagtagccatagcttgaccggctccagttgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 43077991  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  43077990 tcgacgcattcacagaggattcagctttctcaaacacaat 43077951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 62 - 180
Target Start/End: Complemental strand, 28649055 - 28648937
Alignment:
Q  62 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttg 161  Q
    |||||||||||||| | |||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||| || |||||      
T  28649055 gcaacagtagccatagcttgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgacgcattca 28648956  T
Q  162 cggaggattcaactttctc 180  Q
    | ||||||||| |||||||    
T  28648955 cagaggattcagctttctc 28648937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 157
Target Start/End: Original strand, 28960120 - 28960226
Alignment:
Q  51 cattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctt 150  Q
    |||| ||||| |||||||||||| | ||||| |||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| ||||||||    
T  28960120 cattgataggtgcaacagtagccgttgattgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctctt 28960219  T
Q  151 tgatgca 157  Q
     ||||||    
T  28960220 cgatgca 28960226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 50 - 180
Target Start/End: Original strand, 29967387 - 29967517
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| ||||| |||||||| || || |||||||| ||||| ||||||||||| || || || || ||||| || ||||    
T  29967387 gcattgataggagcaacagtagccattgattgcccggctccagctgacaccatccccacttccgtttctttctttttgtggtgtccattaccatatctct 29967486  T
Q  150 ttgatgcatttgcggaggattcaactttctc 180  Q
    | || |||||  | ||||||||| |||||||    
T  29967487 tcgacgcattcacagaggattcagctttctc 29967517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 50 - 180
Target Start/End: Complemental strand, 30029256 - 30029126
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| ||||| |||||||| || || |||||||| ||||| ||||||||||| || || || || ||||| || ||||    
T  30029256 gcattgataggagcaacagtagccattgattgcccggctccagctgacaccatccccacttccgtttctttctttttgtggtgtccattaccatatctct 30029157  T
Q  150 ttgatgcatttgcggaggattcaactttctc 180  Q
    | || |||||  | ||||||||| |||||||    
T  30029156 tcgacgcattcacagaggattcagctttctc 30029126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 11325686 - 11325634
Alignment:
Q  2 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 54  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  11325686 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 11325634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 13184918 - 13184970
Alignment:
Q  2 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 54  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  13184918 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 13184970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 13440764 - 13440816
Alignment:
Q  2 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 54  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  13440764 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 13440816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 33877139 - 33877087
Alignment:
Q  2 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 54  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  33877139 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 33877087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 123; Significance: 2e-63; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 16283330 - 16283104
Alignment:
Q  1 aggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacc 100  Q
    |||||||||| ||||  ||||||| ||||||||||||   |  ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  16283330 aggatgctgagagtacggcgcatatgggtacgacggaggcatttgggcagcattaataggagcaacagtagccatggattgaccggctccggcagacacc 16283231  T
Q  101 atccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctc 200  Q
    ||||||||||| |||||||||||||| || || |||||||| |||||||||||||||||  | ||||||||| |||||||||||||||| || |||||||    
T  16283230 atccctacttccgtttctttcttcttgtggtgtccgttaccatacctctttgatgcattcacagaggattcagctttctcgaatacaatgattccttctc 16283131  T
Q  201 tgatagcttcttctagacgagtcccca 227  Q
    |||  |||||||| |||||||| ||||    
T  16283130 tgacggcttcttccagacgagttccca 16283104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 22081206 - 22081420
Alignment:
Q  1 aggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacc 100  Q
    |||||||||| ||||||||   ||| | |||| ||||  || ||| |||||||| || ||||||||||||||||||||||||| || |||||||||||||    
T  22081206 aggatgctgagagtattgcatgtactgatacggcggaggtagctgagcagcattgatgggggcaacagtagccatggattgactggttccggcagatacc 22081305  T
Q  101 atccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctc 200  Q
    |||||||||||||| |||||||||||||||||||| || || ||| || ||||||||||||| |||||||||  ||| || || ||||||||||| ||||    
T  22081306 atccctacttctgtctctttcttcttatgatgaccattgccatacttccttgatgcatttgcagaggattcacatttttcaaacacaataatgccatctc 22081405  T
Q  201 tgatagcttcttcta 215  Q
    ||| ||| |||||||    
T  22081406 tgacagcctcttcta 22081420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 44 - 219
Target Start/End: Complemental strand, 19687936 - 19687761
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||| || || || ||||| |    
T  19687936 tgggcagcattgataggagcaacagtagccatggattgaccggctccggctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 19687837  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacg 219  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  |||||||| |||||    
T  19687836 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcttccagacg 19687761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 44 - 227
Target Start/End: Complemental strand, 16277392 - 16277209
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  16277392 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 16277293  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtcccca 227  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  |||||||| |||||||| ||||    
T  16277292 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcttccagacgagttccca 16277209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 44 - 227
Target Start/End: Complemental strand, 14557465 - 14557282
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||||| || |||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  14557465 tgggctgcattgataggagcgacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 14557366  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtcccca 227  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || || || ||||  |||||||| |||||||| ||||    
T  14557365 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcttccagacgagttccca 14557282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 44 - 189
Target Start/End: Original strand, 2137636 - 2137781
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  2137636 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 2137735  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    ||||||||||||||||  | ||||||||| |||||||||| |||||    
T  2137736 acctctttgatgcattcacagaggattcagctttctcgaacacaat 2137781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 44 - 227
Target Start/End: Original strand, 27609282 - 27609465
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||| ||| |||||||||||||| || || || ||||| |    
T  27609282 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctatttccgtttctttcttcttgtggtgtccattaccat 27609381  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtcccca 227  Q
    ||||||||||||||||  | ||||||||  |||||||||| ||||| || || || ||||  ||||| || |||||||| ||||    
T  27609382 acctctttgatgcattcacagaggattcggctttctcgaacacaatgattccatccctgacggcttcctccagacgagttccca 27609465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 18710418 - 18710279
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || ||||| || ||||| |||||||||||||| || || || ||||| |||||||    
T  18710418 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatacctct 18710319  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | ||||||||  | ||||||||| |||||||||| |||||    
T  18710318 tcgatgcattcacagaggattcagctttctcgaacacaat 18710279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 50 - 192
Target Start/End: Complemental strand, 19674270 - 19674128
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| |||||||||||||||| |||||| || || |||||||| || || |||||||||||||| ||||| || ||||| |||||||    
T  19674270 gcattgataggagcaacggtagccatggattgactggctccagctgacaccatccccacgtccgtttctttcttcttgtgatgtccattaccatacctct 19674171  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaataat 192  Q
    | || ||| | || || |||||| |||||||||| ||||||||    
T  19674170 tcgacgcactcgcagaagattcagctttctcgaacacaataat 19674128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 50 - 180
Target Start/End: Original strand, 31490133 - 31490263
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| |||||||||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  31490133 gcattgataggggcaacagtagccattgattgaccggctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatatctct 31490232  T
Q  150 ttgatgcatttgcggaggattcaactttctc 180  Q
    | || |||||  | ||||||||| |||||||    
T  31490233 tcgacgcattcacagaggattcagctttctc 31490263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 44 - 156
Target Start/End: Complemental strand, 31354362 - 31354250
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||||| ||||| || |||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| |    
T  31354362 tgggctgcattgataggagcaacggtggccatggattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccat 31354263  T
Q  144 acctctttgatgc 156  Q
    ||||||| |||||    
T  31354262 acctcttcgatgc 31354250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 157
Target Start/End: Original strand, 19208743 - 19208850
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||||||| |||    
T  19208743 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtacttct 19208842  T
Q  150 ttgatgca 157  Q
    | ||||||    
T  19208843 tcgatgca 19208850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 19286297 - 19286158
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||| |||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  19286297 gcattgataggagcaacagtggccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 19286198  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | || ||| | || || |||||| ||||||| || |||||    
T  19286197 tcgacgcactcgcagaagattcagctttctcaaacacaat 19286158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 62 - 189
Target Start/End: Original strand, 28362350 - 28362477
Alignment:
Q  62 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttg 161  Q
    ||||| ||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| || ||||| |||||| |      
T  28362350 gcaacggtagccatggattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctcttcgatgcactca 28362449  T
Q  162 cggaggattcaactttctcgaatacaat 189  Q
    | ||||||||| ||||||| || |||||    
T  28362450 cagaggattcagctttctcaaacacaat 28362477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 50 - 227
Target Start/End: Original strand, 3329902 - 3330079
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||  |||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  3329902 gcattgataggagcaacgatagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 3330001  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtcccca 227  Q
    | || |||||  | ||||||||| ||||||| || ||||| || || || ||||  ||||| || |||||||| ||||    
T  3330002 tcgacgcattcacagaggattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgagttccca 3330079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 50 - 203
Target Start/End: Complemental strand, 29829145 - 29828992
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  29829145 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 29829046  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctga 203  Q
    | || |||||  | ||||||||| ||||||| || ||||| || || |||||||    
T  29829045 tcgacgcattcacagaggattcagctttctcaaacacaatgattccatctctga 29828992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 19518526 - 19518665
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||| ||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  19518526 gcattgataggagcaacagtagtcattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 19518625  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  19518626 tcgacgcattcacagaggattcagctttctcaaacacaat 19518665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 50 - 180
Target Start/End: Complemental strand, 33258555 - 33258425
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| ||||| |||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  33258555 gcattgataggagcaacagtagccattgattgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgcccattaccatatctct 33258456  T
Q  150 ttgatgcatttgcggaggattcaactttctc 180  Q
    | || |||||  | ||||||||| |||||||    
T  33258455 tcgacgcattcacagaggattcagctttctc 33258425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 203
Target Start/End: Original strand, 12093116 - 12093269
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||| ||||||||| ||||| |||||| | || || ||||| || ||||| |||||||||||||| || || || ||||| || ||||    
T  12093116 gcattgataggagcaatagtagccatagattggccggctgcagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatatctct 12093215  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctga 203  Q
    | |||||| | |  || |||||| ||||||| || ||||| || || |||||||    
T  12093216 tcgatgcactcgtagaagattcagctttctcaaacacaatgatcccatctctga 12093269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 44562985 - 44562932
Alignment:
Q  1 aggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 54  Q
    |||||||||| ||||||||||||||||||||||||||  || ||| ||||||||    
T  44562985 aggatgctgagagtattgcgcatacgggtacgacggaggtagctgagcagcatt 44562932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 19659371 - 19659423
Alignment:
Q  2 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 54  Q
    ||||||||| ||||||||||||||||||||||||||  || ||| ||||||||    
T  19659371 ggatgctgagagtattgcgcatacgggtacgacggaggtagctgagcagcatt 19659423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 9354505 - 9354453
Alignment:
Q  2 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 54  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  9354505 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 9354453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 107; Significance: 9e-54; HSPs: 3)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 29644 - 29418
Alignment:
Q  1 aggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacc 100  Q
    |||||||||| | ||  |||||||||||||||| |||   |  ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  29644 aggatgctgagaatacggcgcatacgggtacgatggaggcatttgggcagcattaataggagcaacagtagccatggattgaccggctccggcagacacc 29545  T
Q  101 atccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctc 200  Q
    ||||||||||| |||||||||||||| || || |||||||| |||||||||||||||||  | ||||||||| |||| ||||| ||||| || ||||| |    
T  29544 atccctacttccgtttctttcttcttgtggtgtccgttaccatacctctttgatgcattcacagaggattcagctttttcgaacacaatgattccttccc 29445  T
Q  201 tgatagcttcttctagacgagtcccca 227  Q
    |||  |||||||| |||||||| ||||    
T  29444 tgacggcttcttccagacgagttccca 29418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 44 - 227
Target Start/End: Original strand, 40487 - 40670
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| || || |||||||| |    
T  40487 tgggctgcattgataggagcaacagtagccatggattgaccggctccggcagacaccatccctacttccgtttctttcttcttgtggtgtccgttaccat 40586  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtcccca 227  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  ||||| || |||||||| ||||    
T  40587 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcctccagacgagttccca 40670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 44 - 219
Target Start/End: Original strand, 47403 - 47578
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||| | |||||||||||||||| |||||||||||| || || |||||||||| ||| |||||||||||||| || || || ||||| |    
T  47403 tgggctgcattgataagagcaacagtagccatgggttgaccggctccagctgacaccatccctatttccgtttctttcttcttgtggtgtccattaccat 47502  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacg 219  Q
    ||||||||||||||||  ||||||||||| |||||||||| ||||| || || || ||||  |||||||| |||||    
T  47503 acctctttgatgcattcacggaggattcagctttctcgaacacaatgattccatccctgacggcttcttccagacg 47578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 21448 - 21234
Alignment:
Q  1 aggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacc 100  Q
    |||||||||| ||||||||   ||| |||||| ||||  || ||| | |||||| || |||||||||||||||| |||||||| || |||||||||||||    
T  21448 aggatgctgagagtattgcatgtactggtacggcggaggtagctgagaagcattgatgggggcaacagtagccacggattgactggttccggcagatacc 21349  T
Q  101 atccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctc 200  Q
    |||||||||||||| |||||||||||||||||||| ||||| ||| || ||||||||||||| ||||||||| ||||||| || |||||||| || ||||    
T  21348 atccctacttctgtctctttcttcttatgatgaccattaccatacttccttgatgcatttgcagaggattcacctttctcaaacacaataattccgtctc 21249  T
Q  201 tgatagcttcttcta 215  Q
    ||| ||| |||||||    
T  21248 tgacagcctcttcta 21234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 7e-42; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 44 - 222
Target Start/End: Complemental strand, 24863552 - 24863374
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||||| |||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||| || || || ||||| |    
T  24863552 tgggctgcattgataggagcaacagtagccatggattgaccggctccggctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 24863453  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagt 222  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  ||||| || ||||||||    
T  24863452 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcctccagacgagt 24863374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 44 - 227
Target Start/End: Original strand, 13299312 - 13299495
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||| || || || ||||| |    
T  13299312 tgggctgcattgataggagcaacagtagccatggattgaccagctccggcagacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 13299411  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtcccca 227  Q
    | ||||||||||||||  | ||||||||| |||||||||| ||||| || || || ||||  |||||||| |||||||| ||||    
T  13299412 atctctttgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcttccagacgagttccca 13299495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 44 - 227
Target Start/End: Original strand, 22935238 - 22935421
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||||| |||||||||| ||||||||||||||| ||||| || |||||||||| ||| |||||||||||||| || || |||||||| |    
T  22935238 tgggctgcattgataggagcaacagtagtcatggattgaccggccccggctgacaccatccctatttccgtttctttcttcttgtggtgtccgttaccat 22935337  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtcccca 227  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  |||||||| |||||||| ||||    
T  22935338 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcttccagacgagttccca 22935421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 44 - 227
Target Start/End: Original strand, 23857683 - 23857866
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||||| |||||||||| ||||||||||||||| ||||| || |||||||||| ||| |||||||||||||| || || |||||||| |    
T  23857683 tgggctgcattgataggagcaacagtagtcatggattgaccggccccggctgacaccatccctatttccgtttctttcttcttgtggtgtccgttaccat 23857782  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtcccca 227  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  |||||||| |||||||| ||||    
T  23857783 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcttccagacgagttccca 23857866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 49 - 219
Target Start/End: Complemental strand, 20160534 - 20160367
Alignment:
Q  49 agcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctc 148  Q
    |||||||| ||||||||||||||||||||||||||||||    ||| || ||||||||||||||||||| |||||||||||||||||||||||||||||     
T  20160534 agcattaacaggggcaacagtagccatggattgaccggca---gcaaattccatccctacttctgtttccttcttcttatgatgaccgttaccgtacctt 20160438  T
Q  149 tttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacg 219  Q
    |||| |||  |  ||||||||||| |||| || || ||||| || ||||| |||| |||||||||||||||    
T  20160437 tttggtgcgctcacggaggattcacctttatcaaacacaatgattccttccctgacagcttcttctagacg 20160367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 49 - 219
Target Start/End: Original strand, 22172297 - 22172464
Alignment:
Q  49 agcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctc 148  Q
    |||||||| ||||||||||||||||||||||||||||||    ||| || ||||||||||||||||||| |||||||||||||||||||||||||||||     
T  22172297 agcattaacaggggcaacagtagccatggattgaccggca---gcaaattccatccctacttctgtttccttcttcttatgatgaccgttaccgtacctt 22172393  T
Q  149 tttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacg 219  Q
    |||| |||  |  ||||||||||| |||| || || ||||| || ||||| |||| |||||||||||||||    
T  22172394 tttggtgcgctcacggaggattcacctttatcaaacacaatgattccttccctgacagcttcttctagacg 22172464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 44 - 227
Target Start/End: Original strand, 15424678 - 15424861
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  15424678 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 15424777  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtcccca 227  Q
    ||||||||||||||||  | || |||||| |||||||||| ||||| || ||||| ||||  ||||| || |||||||| ||||    
T  15424778 acctctttgatgcattcacagaagattcagctttctcgaacacaatgattccttccctgacggcttcctccagacgagttccca 15424861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 44 - 227
Target Start/End: Complemental strand, 26988836 - 26988653
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  26988836 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 26988737  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtcccca 227  Q
    ||||||| ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  |||||||| |||||||| ||||    
T  26988736 acctcttcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcttccagacgagttccca 26988653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 44 - 203
Target Start/End: Complemental strand, 26999908 - 26999749
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  26999908 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 26999809  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctga 203  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||    
T  26999808 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctga 26999749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 44 - 189
Target Start/End: Original strand, 24304979 - 24305124
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||||||||| ||||| || |||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  24304979 tgggcagcattgataggagcgacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 24305078  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    ||||||||||||||||  | ||||||||| |||||||||| |||||    
T  24305079 acctctttgatgcattcacagaggattcagctttctcgaacacaat 24305124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 26918209 - 26918070
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |||||||    
T  26918209 gcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctct 26918110  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | ||||||||  | ||||||||| |||||||||| |||||    
T  26918109 tcgatgcattcacagaggattcagctttctcgaacacaat 26918070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 56 - 189
Target Start/End: Complemental strand, 16749677 - 16749544
Alignment:
Q  56 ataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatg 155  Q
    ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |||||||| ||||    
T  16749677 ataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatg 16749578  T
Q  156 catttgcggaggattcaactttctcgaatacaat 189  Q
    || |  | ||||||||| |||||||||| |||||    
T  16749577 cactcacagaggattcagctttctcgaacacaat 16749544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 29549307 - 29549168
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| ||||| || ||||| |||||||    
T  29549307 gcattgataggagcaacggtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtgatgtccattaccatacctct 29549208  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  29549207 tcgatgcactcacagaggattcagctttctcaaacacaat 29549168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 22477592 - 22477673
Alignment:
Q  2 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgac 83  Q
    ||||||||| |||| |||||||||||||||||| ||  ||| |||||||||||||| |||||||||||||||||||||||||    
T  22477592 ggatgctgagagtactgcgcatacgggtacgacagaggtaattgggcagcattaattggggcaacagtagccatggattgac 22477673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 44 - 189
Target Start/End: Complemental strand, 27044225 - 27044080
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||||| ||||| ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |    
T  27044225 tgggctgcattgataggagcaacggtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccat 27044126  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | ||||| |||||| |  | ||||||||| ||||||| || |||||    
T  27044125 atctcttcgatgcactcacagaggattcagctttctcaaacacaat 27044080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 3695892 - 3695753
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  3695892 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 3695793  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | ||||||||  | ||||||||| ||||||| || |||||    
T  3695792 tcgatgcattcacagaggattcagctttctcaaacacaat 3695753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 157
Target Start/End: Complemental strand, 4525118 - 4525011
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  4525118 gcattgataggtgcaacagtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 4525019  T
Q  150 ttgatgca 157  Q
    | ||||||    
T  4525018 tcgatgca 4525011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 157
Target Start/End: Complemental strand, 4757590 - 4757483
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| || ||||||||||| ||||||||||||||||| || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  4757590 gcattgataggagcgacagtagccattgattgaccggctccggctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 4757491  T
Q  150 ttgatgca 157  Q
    | ||||||    
T  4757490 tcgatgca 4757483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 4772826 - 4772687
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| |||||||| ||||||||||||||||| || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  4772826 gcattgataggagcaacggtagccatagattgaccggctccggctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 4772727  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  4772726 tcgatgcactcacagaggattcagctttctcaaacacaat 4772687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 27007541 - 27007402
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  27007541 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 27007442  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  27007441 tcgatgcactcacagaggattcagctttctcaaacacaat 27007402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 27484946 - 27484807
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || |||||||| ||||    
T  27484946 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtatctct 27484847  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  27484846 tcgatgcactcacagaggattcagctttctcaaacacaat 27484807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 157
Target Start/End: Complemental strand, 29572842 - 29572735
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||||||||| |    
T  29572842 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttt 29572743  T
Q  150 ttgatgca 157  Q
    | ||||||    
T  29572742 tcgatgca 29572735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 44 - 189
Target Start/End: Complemental strand, 17025097 - 17024952
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||||| |||||||||||||| | |||||||||||| || || ||||| || ||||| |||||||||||||| || || || ||||| |    
T  17025097 tgggctgcattgataggagcaacagtagccatagcttgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccat 17024998  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    ||||||| ||||||||  | ||||||||  ||||||| || |||||    
T  17024997 acctcttcgatgcattcacagaggattcggctttctcaaacacaat 17024952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 29501235 - 29501096
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  29501235 gcattgataggagcaacggtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 29501136  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | || |||||  |  |||||||| ||||||| || |||||    
T  29501135 tcgacgcattcacaaaggattcagctttctcaaacacaat 29501096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 62 - 157
Target Start/End: Original strand, 30558395 - 30558490
Alignment:
Q  62 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgca 157  Q
    ||||| ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| ||||||    
T  30558395 gcaacggtagccatggattgaccggctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatacctcttcgatgca 30558490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 34463728 - 34463867
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||| ||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  34463728 gcattgataggagcaacagtagtcattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 34463827  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  34463828 tcgacgcattcacagaggattcagctttctcaaacacaat 34463867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 50 - 180
Target Start/End: Original strand, 16944394 - 16944524
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| ||||| |||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  16944394 gcattgataggagcaacagtagccattgattgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 16944493  T
Q  150 ttgatgcatttgcggaggattcaactttctc 180  Q
    | || |||||  | ||||||||| |||||||    
T  16944494 tcgacgcattcacagaggattcagctttctc 16944524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 56 - 156
Target Start/End: Original strand, 26778000 - 26778100
Alignment:
Q  56 ataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatg 155  Q
    ||||| |||||||||||||| ||||| |||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| ||||    
T  26778000 ataggtgcaacagtagccattgattgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatg 26778099  T
Q  156 c 156  Q
    |    
T  26778100 c 26778100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 50 - 157
Target Start/End: Original strand, 27360377 - 27360484
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  27360377 gcattgataggagcaacggtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 27360476  T
Q  150 ttgatgca 157  Q
    | ||||||    
T  27360477 tcgatgca 27360484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 50 - 157
Target Start/End: Original strand, 27450720 - 27450827
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  27450720 gcattgataggagcaacggtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 27450819  T
Q  150 ttgatgca 157  Q
    | ||||||    
T  27450820 tcgatgca 27450827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 50 - 203
Target Start/End: Original strand, 4546151 - 4546304
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| |||||||| |||||||||||| | || || ||||| || ||||| |||||||||||||| || || || ||||| |||||||    
T  4546151 gcattgataggagcaacggtagccatagattgaccggctgcagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatacctct 4546250  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctga 203  Q
    | |||||| | |  || |||||| ||||||| || ||||| || || |||||||    
T  4546251 tcgatgcactcgtagaagattcagctttctcaaacacaatgatcccatctctga 4546304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 50 - 203
Target Start/End: Complemental strand, 28207271 - 28207118
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| |||||||| |||||||||||| | || || ||||| || ||||| |||||||||||||| || || || ||||| |||||||    
T  28207271 gcattgataggagcaacggtagccatagattgaccggctgcagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatacctct 28207172  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctga 203  Q
    | |||||| | |  || |||||| ||||||| || ||||| || || |||||||    
T  28207171 tcgatgcactcgtagaagattcagctttctcaaacacaatgatcccatctctga 28207118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 16673956 - 16673817
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| ||||| || |||||||||||||| || || ||||| || ||||| |||||||||||||| || || || ||||| || ||||    
T  16673956 gcattgataggagcaacggtagctattgattgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatatctct 16673857  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  16673856 tcgacgcattcacagaggattcagctttctcaaacacaat 16673817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 203
Target Start/End: Original strand, 4724510 - 4724663
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| |||||||| |||||||||||| | || || ||||| || ||||| |||||||||||||| || || || ||||| ||||| |    
T  4724510 gcattgataggagcaacggtagccatagattgaccggctgcagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccataccttt 4724609  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctga 203  Q
    | |||||| | |  || |||||| ||||||| || ||||| || || |||||||    
T  4724610 tcgatgcactcgtagaagattcagctttctcaaacacaatgatcccatctctga 4724663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 157
Target Start/End: Original strand, 26116792 - 26116893
Alignment:
Q  56 ataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatg 155  Q
    ||||| ||||| ||||| || |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||| ||||    
T  26116792 ataggagcaacggtagctatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgatg 26116891  T
Q  156 ca 157  Q
    ||    
T  26116892 ca 26116893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 28162538 - 28162485
Alignment:
Q  1 aggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 54  Q
    |||||||||| |||||||||||||||||||||| |||  || ||| ||||||||    
T  28162538 aggatgctgagagtattgcgcatacgggtacgatggaggtagctgagcagcatt 28162485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 8892626 - 8892678
Alignment:
Q  2 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 54  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  8892626 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 8892678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 13522389 - 13522441
Alignment:
Q  2 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 54  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  13522389 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 13522441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 227
Target Start/End: Original strand, 27272947 - 27273127
Alignment:
Q  47 gcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacc 146  Q
    |||||||||| |||||| ||||||||  | |  ||||| ||||| |  |||||||| || || |||||||| |||||||| || || || || || ||||    
T  27272947 gcagcattaacaggggcgacagtagctgtagtctgacctgctccagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacc 27273046  T
Q  147 tctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtcccca 227  Q
    ||||  |  ||||||  || || ||| | ||||| |||||||| || ||||| ||||  ||||| ||||||||||||||||    
T  27273047 tcttcaacccatttgtagaagactcacccttctcaaatacaatgataccttccctgacggcttcctctagacgagtcccca 27273127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 227
Target Start/End: Original strand, 27630077 - 27630253
Alignment:
Q  51 cattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctt 150  Q
    |||||| |||||| ||||||||| | || ||||| ||||| |  |||||||| || || |||||||| |||||||| || || || || || ||||||||    
T  27630077 cattaacaggggcgacagtagccgtagactgacctgctcccgaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 27630176  T
Q  151 tgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtcccca 227  Q
     ||  || |||  || || ||| | ||||| |||||||| || || |||||||  || || ||||||||||||||||    
T  27630177 cgacccacttgtagaagactcacccttctcaaatacaatgataccctctctgacggcctcctctagacgagtcccca 27630253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 33374572 - 33374624
Alignment:
Q  2 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 54  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  33374572 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 33374624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 44 - 227
Target Start/End: Complemental strand, 27130 - 26947
Alignment:
Q  44 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 143  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  27130 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 27031  T
Q  144 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtcccca 227  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || || || ||||  |||||||| |||||||| ||||    
T  27030 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcttccagacgagttccca 26947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 50 - 219
Target Start/End: Original strand, 554 - 723
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||||||||||||||||||||||||||| |  || |||||||||||||| |||||||||||||| || || || ||||| |||||||    
T  554 gcattgataggagcaacagtagccatggattgaccggctccagttgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctct 653  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacg 219  Q
    | ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  |||||||| |||||    
T  654 tcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcttccagacg 723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 8064 - 7925
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||  |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  8064 gcattgataggagcaacagtagccacagattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 7965  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | ||||||||  | ||||||||| ||||||| || |||||    
T  7964 tcgatgcattcacagaggattcagctttctcaaacacaat 7925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 46 - 227
Target Start/End: Original strand, 48568 - 48756
Alignment:
Q  46 ggcagcattaataggggcaacag-tagccatggattga--ccggctccggca-gataccatccc-tacttctgtttctttcttcttatgatgacc-gtta 139  Q
    ||||||||| ||||| ||||||| |||||||||||||   |||||||||||| || |||||||| |||||| |||||||||||||| || || || ||||    
T  48568 ggcagcattgataggagcaacaggtagccatggattggacccggctccggcaagacaccatcccctacttccgtttctttcttcttgtggtgtcccgtta 48667  T
Q  140 ccgtacctcttt-gatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtcccca 227  Q
    || ||||||||| ||||||||  | ||||||||| |||||||||| ||||| || ||||||||||  |||||||| |||||||| ||||    
T  48668 ccatacctcttttgatgcattcacagaggattcagctttctcgaacacaatgattccttctctgacggcttcttccagacgagttccca 48756  T

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Target: scaffold0350 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 50 - 157
Target Start/End: Original strand, 7663 - 7770
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || |||||||||||||    
T  7663 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtacctct 7762  T
Q  150 ttgatgca 157  Q
    | ||||||    
T  7763 tcgatgca 7770  T

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Target: scaffold0144 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 26626 - 26765
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  26626 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 26725  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    | || |||||| | ||||||||| ||||||| || |||||    
T  26726 tcgacgcatttacagaggattcagctttctcaaacacaat 26765  T

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Target: scaffold0237 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 62 - 157
Target Start/End: Original strand, 15366 - 15461
Alignment:
Q  62 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgca 157  Q
    |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||||||||| || ||||||    
T  15366 gcaacagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgca 15461  T

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Target: scaffold0159 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 9490 - 9593
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| || || ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  9490 gcattgataggagcgacggtagccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 9589  T
Q  150 ttga 153  Q
    ||||    
T  9590 ttga 9593  T

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Target: scaffold0038 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 50 - 203
Target Start/End: Complemental strand, 7769 - 7616
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 149  Q
    ||||| ||||| ||||| |||||||| |||||||||||| | || || ||||| || ||||| |||||||||||||| || || || ||||| |||||||    
T  7769 gcattgataggagcaacggtagccatagattgaccggctgcagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatacctct 7670  T
Q  150 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctga 203  Q
    | |||||| | |  || |||||| ||||||| || ||||| || || |||||||    
T  7669 tcgatgcactcgtagaagattcagctttctcaaacacaatgatcccatctctga 7616  T

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Target: scaffold0415 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 5821 - 5682
Alignment:
Q  50 gcattaataggggcaacagtagccatg-gattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctc 148  Q
    ||||| ||||| ||||||||||||||  |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || |||    
T  5821 gcattgataggagcaacagtagccatttgattgaccggctccagctgacaccatccc-acttccgtttctttcttcttgtggtgtccattaccatatctc 5723  T
Q  149 tttgatgcatttgcggaggattcaactttctcgaatacaat 189  Q
    || || |||||  | ||||||||| ||||||| || |||||    
T  5722 ttcgacgcattcacagaggattcagctttctcaaacacaat 5682  T

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Target: scaffold0496 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0496
Description:

Target: scaffold0496; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 90
Target Start/End: Original strand, 157 - 197
Alignment:
Q  50 gcattaataggggcaacagtagccatggattgaccggctcc 90  Q
    ||||| ||||| |||||||||||||| ||||||||||||||    
T  157 gcattgataggtgcaacagtagccattgattgaccggctcc 197  T

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Target: scaffold0260 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 3031 - 3083
Alignment:
Q  2 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 54  Q
    ||||||||| |||||||||| |||||||||||||||  || ||| ||||||||    
T  3031 ggatgctgagagtattgcgcgtacgggtacgacggaggtagctgagcagcatt 3083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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