View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10261A_low_41 (Length: 412)

Name: NF10261A_low_41
Description: NF10261A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10261A_low_41
NF10261A_low_41
[»] chr1 (41 HSPs)
chr1 (15-396)||(37293793-37294174)
chr1 (349-396)||(17269008-17269055)
chr1 (350-396)||(28090714-28090760)
chr1 (350-396)||(32404546-32404592)
chr1 (350-396)||(37462896-37462942)
chr1 (350-396)||(41560445-41560491)
chr1 (349-390)||(7133321-7133362)
chr1 (350-391)||(26299289-26299330)
chr1 (350-391)||(44941796-44941837)
chr1 (353-396)||(1704843-1704886)
chr1 (349-392)||(4318864-4318907)
chr1 (353-396)||(21769734-21769777)
chr1 (349-396)||(27704166-27704213)
chr1 (349-396)||(52532635-52532682)
chr1 (350-396)||(2429649-2429695)
chr1 (350-396)||(8796425-8796471)
chr1 (349-391)||(9599413-9599455)
chr1 (350-396)||(28511821-28511867)
chr1 (349-391)||(37311774-37311816)
chr1 (350-396)||(39140731-39140777)
chr1 (349-391)||(41165503-41165545)
chr1 (350-392)||(46423236-46423278)
chr1 (354-396)||(48431423-48431465)
chr1 (350-396)||(51602272-51602318)
chr1 (350-396)||(52561609-52561655)
chr1 (350-391)||(1210966-1211007)
chr1 (350-391)||(4590552-4590593)
chr1 (350-391)||(25715346-25715387)
chr1 (350-391)||(25979251-25979292)
chr1 (350-391)||(29577473-29577514)
chr1 (350-391)||(30202150-30202191)
chr1 (350-391)||(31274421-31274462)
chr1 (349-386)||(36339823-36339860)
chr1 (350-391)||(38807691-38807732)
chr1 (350-391)||(39525986-39526027)
chr1 (350-391)||(40568430-40568471)
chr1 (350-391)||(49347413-49347454)
chr1 (352-396)||(2544809-2544853)
chr1 (350-386)||(15784985-15785021)
chr1 (350-386)||(37429919-37429955)
chr1 (350-386)||(43481818-43481854)
[»] chr7 (35 HSPs)
chr7 (325-391)||(43282051-43282117)
chr7 (350-396)||(9210724-9210770)
chr7 (15-107)||(46184400-46184492)
chr7 (350-396)||(28708597-28708643)
chr7 (350-391)||(5418295-5418336)
chr7 (351-388)||(32789958-32789995)
chr7 (350-391)||(40979948-40979989)
chr7 (350-391)||(42187662-42187703)
chr7 (350-390)||(27649002-27649042)
chr7 (355-389)||(17907749-17907783)
chr7 (350-396)||(28627953-28627999)
chr7 (349-387)||(30814144-30814182)
chr7 (349-387)||(31681039-31681077)
chr7 (350-396)||(36101797-36101843)
chr7 (349-391)||(40630655-40630697)
chr7 (350-396)||(47852303-47852349)
chr7 (350-391)||(2885742-2885783)
chr7 (350-391)||(6263480-6263521)
chr7 (350-391)||(6375089-6375130)
chr7 (350-387)||(7273325-7273362)
chr7 (350-391)||(11594181-11594222)
chr7 (350-391)||(12841295-12841336)
chr7 (350-391)||(28208348-28208389)
chr7 (350-391)||(31682622-31682663)
chr7 (350-391)||(34035174-34035215)
chr7 (350-391)||(35906221-35906262)
chr7 (350-391)||(36652213-36652254)
chr7 (350-391)||(38135233-38135274)
chr7 (350-391)||(39906392-39906433)
chr7 (350-391)||(43281895-43281936)
chr7 (350-391)||(44855194-44855235)
chr7 (350-391)||(45836502-45836543)
chr7 (350-386)||(20158691-20158727)
chr7 (350-390)||(31869122-31869162)
chr7 (352-396)||(34341417-34341461)
[»] chr6 (6 HSPs)
chr6 (350-396)||(34525-34571)
chr6 (350-391)||(12890796-12890837)
chr6 (349-396)||(8364772-8364819)
chr6 (350-391)||(3206479-3206520)
chr6 (350-391)||(30031477-30031518)
chr6 (350-391)||(31819052-31819093)
[»] scaffold0570 (1 HSPs)
scaffold0570 (350-391)||(968-1009)
[»] chr8 (22 HSPs)
chr8 (350-391)||(45041336-45041377)
chr8 (351-398)||(14903775-14903822)
chr8 (353-396)||(35914624-35914667)
chr8 (350-396)||(490551-490597)
chr8 (350-396)||(1928607-1928653)
chr8 (350-396)||(29520865-29520911)
chr8 (350-392)||(44047552-44047594)
chr8 (350-391)||(42854024-42854065)
chr8 (349-396)||(32931176-32931223)
chr8 (350-396)||(1313780-1313826)
chr8 (353-391)||(8932924-8932962)
chr8 (350-396)||(16035747-16035793)
chr8 (350-396)||(30689951-30689997)
chr8 (349-391)||(44699687-44699729)
chr8 (350-396)||(45419451-45419497)
chr8 (350-391)||(11523743-11523784)
chr8 (350-391)||(12491158-12491199)
chr8 (350-391)||(14742102-14742143)
chr8 (351-396)||(27556323-27556368)
chr8 (350-391)||(36565261-36565302)
chr8 (350-391)||(42469747-42469788)
chr8 (349-385)||(40982915-40982951)
[»] chr5 (28 HSPs)
chr5 (353-396)||(41108752-41108795)
chr5 (350-396)||(7359281-7359327)
chr5 (350-396)||(27386556-27386602)
chr5 (350-396)||(42272693-42272739)
chr5 (350-386)||(30639736-30639772)
chr5 (350-396)||(418054-418100)
chr5 (350-396)||(2090629-2090675)
chr5 (350-396)||(11069182-11069228)
chr5 (350-396)||(12534428-12534474)
chr5 (350-396)||(20456989-20457035)
chr5 (350-396)||(32442145-32442191)
chr5 (350-396)||(38132552-38132598)
chr5 (350-396)||(42576226-42576272)
chr5 (350-396)||(43423515-43423561)
chr5 (354-391)||(28103-28140)
chr5 (350-391)||(408514-408555)
chr5 (350-391)||(2915516-2915557)
chr5 (350-391)||(5558362-5558403)
chr5 (350-391)||(9400732-9400773)
chr5 (350-391)||(13561406-13561447)
chr5 (350-391)||(29816603-29816644)
chr5 (350-391)||(30213796-30213837)
chr5 (350-391)||(38685188-38685229)
chr5 (350-391)||(39322099-39322140)
chr5 (350-382)||(219480-219512)
chr5 (353-385)||(1001206-1001238)
chr5 (350-390)||(14665934-14665974)
chr5 (349-381)||(38830550-38830582)
[»] chr4 (29 HSPs)
chr4 (350-389)||(15665324-15665363)
chr4 (349-396)||(29399020-29399067)
chr4 (350-396)||(15661892-15661938)
chr4 (350-396)||(35690487-35690533)
chr4 (350-391)||(23906317-23906358)
chr4 (350-391)||(30634126-30634167)
chr4 (350-386)||(25575050-25575086)
chr4 (349-396)||(28467654-28467701)
chr4 (349-391)||(1965652-1965694)
chr4 (350-388)||(7066519-7066557)
chr4 (350-396)||(48174113-48174159)
chr4 (362-396)||(51438661-51438695)
chr4 (350-391)||(4441074-4441115)
chr4 (350-391)||(19154883-19154924)
chr4 (350-391)||(19969402-19969443)
chr4 (350-391)||(26037525-26037566)
chr4 (350-391)||(27450200-27450241)
chr4 (350-391)||(28486142-28486183)
chr4 (350-391)||(31959834-31959875)
chr4 (352-397)||(38585273-38585318)
chr4 (350-391)||(45209225-45209266)
chr4 (350-391)||(49939754-49939795)
chr4 (350-391)||(50238635-50238676)
chr4 (350-391)||(50238721-50238762)
chr4 (350-391)||(52569535-52569576)
chr4 (350-387)||(55007971-55008008)
chr4 (350-386)||(7947163-7947199)
chr4 (350-382)||(49738570-49738602)
chr4 (350-386)||(50862857-50862893)
[»] chr2 (26 HSPs)
chr2 (349-396)||(3481370-3481417)
chr2 (350-396)||(887085-887131)
chr2 (350-396)||(9531620-9531666)
chr2 (350-396)||(18959127-18959173)
chr2 (350-391)||(12520082-12520123)
chr2 (350-391)||(39709221-39709262)
chr2 (350-391)||(43573150-43573191)
chr2 (352-396)||(11992130-11992174)
chr2 (350-396)||(440932-440978)
chr2 (350-396)||(3720435-3720481)
chr2 (350-396)||(9496082-9496128)
chr2 (350-396)||(13443928-13443974)
chr2 (350-396)||(33504440-33504486)
chr2 (350-396)||(42549857-42549903)
chr2 (350-391)||(227410-227451)
chr2 (350-391)||(451668-451709)
chr2 (350-391)||(3635343-3635384)
chr2 (350-391)||(4807816-4807857)
chr2 (350-391)||(10516769-10516810)
chr2 (350-391)||(12474947-12474988)
chr2 (350-391)||(17670689-17670730)
chr2 (350-391)||(28508899-28508940)
chr2 (350-391)||(30306253-30306294)
chr2 (350-382)||(12026032-12026064)
chr2 (350-390)||(25834900-25834940)
chr2 (352-396)||(38435168-38435212)
[»] chr3 (26 HSPs)
chr3 (350-392)||(38060934-38060976)
chr3 (350-396)||(45374497-45374543)
chr3 (350-396)||(48734167-48734213)
chr3 (350-391)||(19676101-19676142)
chr3 (350-391)||(41529982-41530023)
chr3 (351-396)||(46148244-46148289)
chr3 (350-391)||(48508456-48508497)
chr3 (350-386)||(29601118-29601154)
chr3 (353-396)||(40991647-40991690)
chr3 (349-396)||(42510035-42510082)
chr3 (350-396)||(24541352-24541398)
chr3 (350-396)||(24778629-24778675)
chr3 (350-384)||(34253688-34253722)
chr3 (350-396)||(35420485-35420530)
chr3 (360-398)||(36304180-36304218)
chr3 (349-391)||(40273224-40273266)
chr3 (350-396)||(52927868-52927914)
chr3 (350-391)||(5169053-5169094)
chr3 (350-391)||(12096725-12096766)
chr3 (350-383)||(20208227-20208260)
chr3 (350-391)||(25191598-25191639)
chr3 (350-391)||(40672387-40672428)
chr3 (350-391)||(49503588-49503629)
chr3 (350-391)||(52882682-52882723)
chr3 (360-396)||(49841832-49841868)
chr3 (354-390)||(53214895-53214931)
[»] scaffold1318 (1 HSPs)
scaffold1318 (350-391)||(552-593)
[»] scaffold0168 (1 HSPs)
scaffold0168 (350-391)||(28909-28950)


Alignment Details
Target: chr1 (Bit Score: 366; Significance: 0; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 366; E-Value: 0
Query Start/End: Original strand, 15 - 396
Target Start/End: Original strand, 37293793 - 37294174
Alignment:
Q  15 tggacatcaacagtccttgaacaaactcacatcttttcgccttctcctccttgtccttaactgacatggttggtgtctctacatggctgaacagaaagag 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37293793 tggacatcaacagtccttgaacaaactcacatcttttcgccttctcctccttgtccttaactgacatggttggtgtctctacatggctgaacagaaagag 37293892  T
Q  115 taggcttgttagaaagcagtagacactagaactcatgacatcgtgtaatgttgttggaaaattatgcccttagcaagccacaaaacaatgtttacaacaa 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  37293893 taggcttgttagaaagcagtagacactagaactcatgacatcgtgtaatgttattggaaaattatgcccttagcaaggcacaaaacaatgtttacaacaa 37293992  T
Q  215 ggcactagattggttgattgttcaggtgaaaggttacaaatacaatcaggaatcttttaatacataaagcaaataaaatggtcaattgaataagctggaa 314  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37293993 ggcactagattggttgatcgttcaggtgaaaggttacaaatacaatcaggaatcttttaatacataaagcaaataaaatggtcaattgaataagctggaa 37294092  T
Q  315 gctataactaacaacaactaagccttatcccacattcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  37294093 gctataactaacaacaactaagccttatcccacattcccactaaatggggtcagctacatggatcaaattacgccataatgt 37294174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 349 - 396
Target Start/End: Original strand, 17269008 - 17269055
Alignment:
Q  349 ttcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||    
T  17269008 ttcccactaaatggggtcggctacatggatcaaattacgccataatgt 17269055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 350 - 396
Target Start/End: Original strand, 28090714 - 28090760
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| ||||||| |||||||||||||||||||||||| ||||    
T  28090714 tcccactaagtggggtcggctacatggatcaaattacgccataatgt 28090760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 350 - 396
Target Start/End: Original strand, 32404546 - 32404592
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| ||||||| |||||||||||||||||||||||| ||||    
T  32404546 tcccactaagtggggtcggctacatggatcaaattacgccattatgt 32404592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 350 - 396
Target Start/End: Original strand, 37462896 - 37462942
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| ||||||| |||||||||||||||||||||||| ||||    
T  37462896 tcccactaagtggggtcggctacatggatcaaattacgccataatgt 37462942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 350 - 396
Target Start/End: Complemental strand, 41560491 - 41560445
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| ||||||| |||||||||||||||||||||||| ||||    
T  41560491 tcccactaagtggggtcggctacatggatcaaattacgccataatgt 41560445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 390
Target Start/End: Original strand, 7133321 - 7133362
Alignment:
Q  349 ttcccactaaatggggtcagctacatggatcaaattacgcca 390  Q
    |||||||||| |||||||||||||||||||||||||| ||||    
T  7133321 ttcccactaagtggggtcagctacatggatcaaattaggcca 7133362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 391
Target Start/End: Complemental strand, 26299330 - 26299289
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| ||||||||||||||||||||||||    
T  26299330 tcccactaagtggggtcggctacatggatcaaattacgccat 26299289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 44941796 - 44941837
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| ||||||||||||||||||||||||    
T  44941796 tcccactaagtggggtcggctacatggatcaaattacgccat 44941837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 353 - 396
Target Start/End: Complemental strand, 1704886 - 1704843
Alignment:
Q  353 cactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    |||||| |||||||||| ||||||||||||||| ||||||||||    
T  1704886 cactaagtggggtcagcaacatggatcaaattatgccatgatgt 1704843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 349 - 392
Target Start/End: Original strand, 4318864 - 4318907
Alignment:
Q  349 ttcccactaaatggggtcagctacatggatcaaattacgccatg 392  Q
    |||||||||| ||||||| |||||||||||||||| ||||||||    
T  4318864 ttcccactaagtggggtcggctacatggatcaaatgacgccatg 4318907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 353 - 396
Target Start/End: Original strand, 21769734 - 21769777
Alignment:
Q  353 cactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    |||||| ||||||| |||||||||||||||||||||||| ||||    
T  21769734 cactaagtggggtcggctacatggatcaaattacgccataatgt 21769777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 349 - 396
Target Start/End: Complemental strand, 27704213 - 27704166
Alignment:
Q  349 ttcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||||  |||||| |||||||||||||||||||||||| ||||    
T  27704213 ttcccactaagcggggtcggctacatggatcaaattacgccataatgt 27704166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 349 - 396
Target Start/End: Original strand, 52532635 - 52532682
Alignment:
Q  349 ttcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    |||||||||| ||||||| |||||||| ||||||||||||||| ||||    
T  52532635 ttcccactaagtggggtcggctacatgaatcaaattacgccataatgt 52532682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Original strand, 2429649 - 2429695
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| ||||||| ||||| |||||||||||||||||| ||||    
T  2429649 tcccactaagtggggtcggctacgtggatcaaattacgccataatgt 2429695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Complemental strand, 8796471 - 8796425
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| ||||||| ||||||||||| |||||||||||| ||||    
T  8796471 tcccactaagtggggtcggctacatggattaaattacgccataatgt 8796425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 391
Target Start/End: Original strand, 9599413 - 9599455
Alignment:
Q  349 ttcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    |||||||||| |  |||||||||||||||||||||||||||||    
T  9599413 ttcccactaagtaaggtcagctacatggatcaaattacgccat 9599455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Original strand, 28511821 - 28511867
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| ||||||| ||||||| |||||||||||||||| ||||    
T  28511821 tcccactaagtggggtcggctacattgatcaaattacgccataatgt 28511867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 391
Target Start/End: Original strand, 37311774 - 37311816
Alignment:
Q  349 ttcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    |||||||||| ||||||| |||||||||||||||| |||||||    
T  37311774 ttcccactaagtggggtcggctacatggatcaaatgacgccat 37311816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Complemental strand, 39140777 - 39140731
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| ||||||| |||||||| ||||||||||||||| ||||    
T  39140777 tcccactaagtggggtcggctacatgaatcaaattacgccataatgt 39140731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 391
Target Start/End: Complemental strand, 41165545 - 41165503
Alignment:
Q  349 ttcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    |||||||||| ||||||| |||||||||||||||| |||||||    
T  41165545 ttcccactaagtggggtcggctacatggatcaaatgacgccat 41165503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 392
Target Start/End: Original strand, 46423236 - 46423278
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatg 392  Q
    ||||||||| ||||||| |||||||||||||||| ||||||||    
T  46423236 tcccactaagtggggtcggctacatggatcaaatgacgccatg 46423278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 396
Target Start/End: Original strand, 48431423 - 48431465
Alignment:
Q  354 actaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||| |||||||||||||| ||||||||||| ||||||||||    
T  48431423 actaagtggggtcagctacaaggatcaaattaagccatgatgt 48431465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Complemental strand, 51602318 - 51602272
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| ||||||  |||||||||||||||| ||||||||||||    
T  51602318 tcccactaagtggggttggctacatggatcaaatgacgccatgatgt 51602272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Original strand, 52561609 - 52561655
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| ||||||| ||||||||||||||||| |||||| ||||    
T  52561609 tcccactaagtggggtcggctacatggatcaaatttcgccataatgt 52561655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Complemental strand, 1211007 - 1210966
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  1211007 tcccactaagtggggtcggctacatggatcaaatgacgccat 1210966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 4590552 - 4590593
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| ||||||||||||||||||| ||||    
T  4590552 tcccactaagtggggtcggctacatggatcaaattacaccat 4590593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 25715346 - 25715387
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| || |||| ||||||||||||||||||||||||    
T  25715346 tcccactaagtgaggtcggctacatggatcaaattacgccat 25715387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 25979251 - 25979292
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  25979251 tcccactaagtggggtcggctacatggatcaaatgacgccat 25979292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Complemental strand, 29577514 - 29577473
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  29577514 tcccactaagtggggtcggctacatggatcaaatgacgccat 29577473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 30202150 - 30202191
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  30202150 tcccactaagtggggtcggctacatggatcaaatgacgccat 30202191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 31274421 - 31274462
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||||||||||  ||||||||||||||||    
T  31274421 tcccactaagtggggtcagctacacagatcaaattacgccat 31274462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 386
Target Start/End: Original strand, 36339823 - 36339860
Alignment:
Q  349 ttcccactaaatggggtcagctacatggatcaaattac 386  Q
    |||||||||| ||| |||||||||||||||||||||||    
T  36339823 ttcccactaagtggagtcagctacatggatcaaattac 36339860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 38807691 - 38807732
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||| |||||||||||||    
T  38807691 tcccactaagtggggtcggctacatggaacaaattacgccat 38807732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Complemental strand, 39526027 - 39525986
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||||| |||||||||||||||||||||  |||||||    
T  39526027 tcccactaaatagggtcagctacatggatcaaacgacgccat 39525986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 40568430 - 40568471
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||  ||||||||||||||||||||||||    
T  40568430 tcccactaagtggggttggctacatggatcaaattacgccat 40568471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 49347413 - 49347454
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  49347413 tcccactaagtggggtcggctacatggatcaaatgacgccat 49347454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 396
Target Start/End: Complemental strand, 2544853 - 2544809
Alignment:
Q  352 ccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||| ||||||| |||||||||||||||||| ||||| ||||    
T  2544853 ccactaagtggggtcggctacatggatcaaattatgccataatgt 2544809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 386
Target Start/End: Original strand, 15784985 - 15785021
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattac 386  Q
    |||||||||||| |||| |||||||||||||||||||    
T  15784985 tcccactaaatgaggtcggctacatggatcaaattac 15785021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 386
Target Start/End: Original strand, 37429919 - 37429955
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattac 386  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  37429919 tcccattaaatggggtcggctacatggatcaaattac 37429955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 386
Target Start/End: Original strand, 43481818 - 43481854
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattac 386  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  43481818 tcccactaagtggggtcggctacatggatcaaattac 43481854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 325 - 391
Target Start/End: Complemental strand, 43282117 - 43282051
Alignment:
Q  325 acaacaactaagccttatcccacattcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    |||||||| ||||||||||||||||||||||||| || |||| |||| || ||||||||||||||||    
T  43282117 acaacaaccaagccttatcccacattcccactaagtgaggtcggctagatagatcaaattacgccat 43282051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 350 - 396
Target Start/End: Original strand, 9210724 - 9210770
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||    
T  9210724 tcccactaagtggggtcagctacatggatcaaattacgccataatgt 9210770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 46184492 - 46184400
Alignment:
Q  15 tggacatcaacagtccttgaacaaactcacatcttttcgccttctcctccttgtccttaactgacatggttggtgtctctacatggctgaaca 107  Q
    |||||| ||| ||||||||||||||||||||||||||  |||| || ||||| ||||| ||||||| ||| || ||||| ||||  |||||||    
T  46184492 tggacagcaatagtccttgaacaaactcacatcttttttccttttcttccttatccttgactgacaaggtaggcgtctccacatttctgaaca 46184400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 350 - 396
Target Start/End: Complemental strand, 28708643 - 28708597
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| ||||||| |||||||||||||||||||||||| ||||    
T  28708643 tcccactaagtggggtcggctacatggatcaaattacgccataatgt 28708597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 391
Target Start/End: Complemental strand, 5418336 - 5418295
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  5418336 tcccactaaatggggtcgactacatggatcaaattacgccat 5418295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 351 - 388
Target Start/End: Original strand, 32789958 - 32789995
Alignment:
Q  351 cccactaaatggggtcagctacatggatcaaattacgc 388  Q
    |||||||| |||||||||||||||||||||||||||||    
T  32789958 cccactaagtggggtcagctacatggatcaaattacgc 32789995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 40979948 - 40979989
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| ||||||||||||||||||||||||    
T  40979948 tcccactaagtggggtcggctacatggatcaaattacgccat 40979989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 391
Target Start/End: Complemental strand, 42187703 - 42187662
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| ||||||||||||||||||||||||    
T  42187703 tcccactaagtggggtcggctacatggatcaaattacgccat 42187662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 350 - 390
Target Start/End: Complemental strand, 27649042 - 27649002
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgcca 390  Q
    ||||||||| ||||||| |||||||||||||||||||||||    
T  27649042 tcccactaagtggggtcggctacatggatcaaattacgcca 27649002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 389
Target Start/End: Original strand, 17907749 - 17907783
Alignment:
Q  355 ctaaatggggtcagctacatggatcaaattacgcc 389  Q
    |||||||||||| ||||||||||||||||||||||    
T  17907749 ctaaatggggtcggctacatggatcaaattacgcc 17907783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Original strand, 28627953 - 28627999
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| ||| ||| |||||||||||||||||||||||| ||||    
T  28627953 tcccactaagtggagtcggctacatggatcaaattacgccataatgt 28627999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 387
Target Start/End: Original strand, 30814144 - 30814182
Alignment:
Q  349 ttcccactaaatggggtcagctacatggatcaaattacg 387  Q
    |||||||||| ||||||| ||||||||||||||||||||    
T  30814144 ttcccactaagtggggtcggctacatggatcaaattacg 30814182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 387
Target Start/End: Original strand, 31681039 - 31681077
Alignment:
Q  349 ttcccactaaatggggtcagctacatggatcaaattacg 387  Q
    |||||||||| ||||||| ||||||||||||||||||||    
T  31681039 ttcccactaagtggggtcggctacatggatcaaattacg 31681077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Original strand, 36101797 - 36101843
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| |||||||| ||||||||||||||||||| ||| ||||    
T  36101797 tcccactaagtggggtcaactacatggatcaaattacgtcataatgt 36101843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 391
Target Start/End: Complemental strand, 40630697 - 40630655
Alignment:
Q  349 ttcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    |||||||||| ||||||| |||||||||||||||| |||||||    
T  40630697 ttcccactaagtggggtcggctacatggatcaaatgacgccat 40630655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Complemental strand, 47852349 - 47852303
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    |||| |||| ||||||| |||||||||||||||||||||||| ||||    
T  47852349 tccccctaagtggggtcggctacatggatcaaattacgccataatgt 47852303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 2885742 - 2885783
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| ||||||||||||||||||| ||||    
T  2885742 tcccactaagtggggtcggctacatggatcaaattacaccat 2885783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Complemental strand, 6263521 - 6263480
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||||| |||||    
T  6263521 tcccactaagtggggtcggctacatggatcaaattatgccat 6263480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Complemental strand, 6375130 - 6375089
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  6375130 tcccactaagtggggtcggctacatggatcaaatgacgccat 6375089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 387
Target Start/End: Complemental strand, 7273362 - 7273325
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacg 387  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  7273362 tcccactaagtggggtcggctacatggatcaaattacg 7273325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Complemental strand, 11594222 - 11594181
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  11594222 tcccactaagtggggtcggctacatggatcaaatgacgccat 11594181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 12841295 - 12841336
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  12841295 tcccactaagtggggtcggctacatggatcaaatgacgccat 12841336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 28208348 - 28208389
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  28208348 tcccactaagtggggtcggctacatggatcaaatgacgccat 28208389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 31682622 - 31682663
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  31682622 tcccactaagtggggtcggctacatggatcaaatgacgccat 31682663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 34035174 - 34035215
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  34035174 tcccactaagtggggtcggctacatggatcaaatgacgccat 34035215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 35906221 - 35906262
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  35906221 tcccactaagtggggtcggctacatggatcaaatgacgccat 35906262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Complemental strand, 36652254 - 36652213
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  36652254 tcccactaagtggggtcggctacatggatcaaatgacgccat 36652213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 38135233 - 38135274
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    |||||| || |||||||||||| |||||||||||||||||||    
T  38135233 tcccaccaagtggggtcagctagatggatcaaattacgccat 38135274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 39906392 - 39906433
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  39906392 tcccactaagtggggtcggctacatggatcaaatgacgccat 39906433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Complemental strand, 43281936 - 43281895
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  43281936 tcccactaagtggggtcggctacatggatcaaatgacgccat 43281895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 44855194 - 44855235
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||| |||||||||||||    
T  44855194 tcccactaagtggggtcggctacatggaccaaattacgccat 44855235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 45836502 - 45836543
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  45836502 tcccactaagtggggtcggctacatggatcaaatgacgccat 45836543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 386
Target Start/End: Original strand, 20158691 - 20158727
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattac 386  Q
    ||||||||| | |||||||||||||||||||||||||    
T  20158691 tcccactaagtagggtcagctacatggatcaaattac 20158727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 390
Target Start/End: Original strand, 31869122 - 31869162
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgcca 390  Q
    ||||||||| ||||||| |||||||||||||||| ||||||    
T  31869122 tcccactaagtggggtcggctacatggatcaaatgacgcca 31869162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 396
Target Start/End: Original strand, 34341417 - 34341461
Alignment:
Q  352 ccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||||||||| ||||||| | |||||||||||||| ||||    
T  34341417 ccactaaatggggtcggctacattggtcaaattacgccataatgt 34341461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 350 - 396
Target Start/End: Original strand, 34525 - 34571
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||    
T  34525 tcccactaagtggggtcagctacatggatcaaattacgccataatgt 34571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 391
Target Start/End: Complemental strand, 12890837 - 12890796
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| ||||||||||||||||||||||||    
T  12890837 tcccactaagtggggtcggctacatggatcaaattacgccat 12890796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 349 - 396
Target Start/End: Complemental strand, 8364819 - 8364772
Alignment:
Q  349 ttcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||||  |||||| |||||||||||||||||||||||| ||||    
T  8364819 ttcccactaagcggggtcggctacatggatcaaattacgccataatgt 8364772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 3206479 - 3206520
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  3206479 tcccactaagtggggtcggctacatggatcaaatgacgccat 3206520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Complemental strand, 30031518 - 30031477
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| || |||| ||||||||||||||||||||||||    
T  30031518 tcccactaagtgaggtcggctacatggatcaaattacgccat 30031477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Complemental strand, 31819093 - 31819052
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  31819093 tcccactaagtggggtcggctacatggatcaaatgacgccat 31819052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 968 - 1009
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  968 tcccactaaatggggtcagctacatggatcaaatgacgccat 1009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 45041336 - 45041377
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  45041336 tcccactaagtggggtcagctacatggatcaaattacgccat 45041377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 351 - 398
Target Start/End: Complemental strand, 14903822 - 14903775
Alignment:
Q  351 cccactaaatggggtcagctacatggatcaaattacgccatgatgtcc 398  Q
    |||||||| |||||| ||||||||||||||||||||||||| ||||||    
T  14903822 cccactaagtggggtaagctacatggatcaaattacgccataatgtcc 14903775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 396
Target Start/End: Original strand, 35914624 - 35914667
Alignment:
Q  353 cactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    |||||| |||||||||||||||||||||||||||||||| ||||    
T  35914624 cactaagtggggtcagctacatggatcaaattacgccataatgt 35914667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 350 - 396
Target Start/End: Complemental strand, 490597 - 490551
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| ||||||| |||||||||||||||||||||||| ||||    
T  490597 tcccactaagtggggtcggctacatggatcaaattacgccataatgt 490551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 350 - 396
Target Start/End: Original strand, 1928607 - 1928653
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| ||||||| |||||||||||||||||||||||| ||||    
T  1928607 tcccactaagtggggtcggctacatggatcaaattacgccataatgt 1928653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 350 - 396
Target Start/End: Complemental strand, 29520911 - 29520865
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||||||||||  |||||||||||||||||||||||| ||||    
T  29520911 tcccactaaatggggtgggctacatggatcaaattacgccataatgt 29520865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 350 - 392
Target Start/End: Original strand, 44047552 - 44047594
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatg 392  Q
    ||||||||| |||||||||||||||||||||||| ||||||||    
T  44047552 tcccactaagtggggtcagctacatggatcaaatgacgccatg 44047594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 42854024 - 42854065
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||||||||||| |||||||||||||||| |||||||    
T  42854024 tcccactaaatggggtcggctacatggatcaaatgacgccat 42854065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 349 - 396
Target Start/End: Complemental strand, 32931223 - 32931176
Alignment:
Q  349 ttcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    |||||||||| ||||||| |||||||||||||||||| ||||| ||||    
T  32931223 ttcccactaagtggggtcggctacatggatcaaattatgccataatgt 32931176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Complemental strand, 1313826 - 1313780
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| |||||||| |||||||||| |||||||||||| ||||    
T  1313826 tcccactaagtggggtcaactacatggataaaattacgccataatgt 1313780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 391
Target Start/End: Complemental strand, 8932962 - 8932924
Alignment:
Q  353 cactaaatggggtcagctacatggatcaaattacgccat 391  Q
    |||||| |||||||||||||||||||||||| |||||||    
T  8932962 cactaagtggggtcagctacatggatcaaatgacgccat 8932924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Original strand, 16035747 - 16035793
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| |||||||||||||||| ||||||||||| ||| ||||    
T  16035747 tcccactaagtggggtcagctacatgaatcaaattacgtcataatgt 16035793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Complemental strand, 30689997 - 30689951
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| ||||||| |||||||||||||||||||| ||| ||||    
T  30689997 tcccactaagtggggtcggctacatggatcaaattacgtcataatgt 30689951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 391
Target Start/End: Complemental strand, 44699729 - 44699687
Alignment:
Q  349 ttcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    |||||||||| ||||||| |||||| |||||||||||||||||    
T  44699729 ttcccactaagtggggtctgctacagggatcaaattacgccat 44699687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Complemental strand, 45419497 - 45419451
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| ||||||| ||||||||||||||||||| |||| ||||    
T  45419497 tcccactaagtggggtcggctacatggatcaaattacaccataatgt 45419451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 11523743 - 11523784
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  11523743 tcccactaagtggggtcggctacatggatcaaatgacgccat 11523784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 12491158 - 12491199
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  12491158 tcccactaagtggggtcggctacatggatcaaatgacgccat 12491199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 14742102 - 14742143
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  14742102 tcccactaagtggggtcggctacatggatcaaatgacgccat 14742143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 351 - 396
Target Start/End: Original strand, 27556323 - 27556368
Alignment:
Q  351 cccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    |||||||| ||||||| |||||||||||||||||| ||||| ||||    
T  27556323 cccactaagtggggtcggctacatggatcaaattatgccataatgt 27556368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 36565261 - 36565302
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  36565261 tcccactaagtggggtcggctacatggatcaaataacgccat 36565302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 42469747 - 42469788
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||| ||| |||||||||||||||||||||||| |||||||    
T  42469747 tcccaataagtggggtcagctacatggatcaaatgacgccat 42469788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 385
Target Start/End: Original strand, 40982915 - 40982951
Alignment:
Q  349 ttcccactaaatggggtcagctacatggatcaaatta 385  Q
    |||||||||||||||||| || |||||||||||||||    
T  40982915 ttcccactaaatggggtcggcaacatggatcaaatta 40982951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000004; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 396
Target Start/End: Original strand, 41108752 - 41108795
Alignment:
Q  353 cactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    |||||| |||||||||||||||||||||||||||||||| ||||    
T  41108752 cactaagtggggtcagctacatggatcaaattacgccataatgt 41108795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 350 - 396
Target Start/End: Original strand, 7359281 - 7359327
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| |||||||||||||||||||||||||||| ||| ||||    
T  7359281 tcccactaagtggggtcagctacatggatcaaattacgtcataatgt 7359327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 350 - 396
Target Start/End: Complemental strand, 27386602 - 27386556
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| ||||||| |||||||||||||||||||||||| ||||    
T  27386602 tcccactaagtggggtcggctacatggatcaaattacgccataatgt 27386556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 350 - 396
Target Start/End: Complemental strand, 42272739 - 42272693
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  42272739 tcccactaagtggggtcagctacatggatcaaatgacgccataatgt 42272693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 350 - 386
Target Start/End: Original strand, 30639736 - 30639772
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattac 386  Q
    ||||||||||||||||| |||||||||||||||||||    
T  30639736 tcccactaaatggggtcggctacatggatcaaattac 30639772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Original strand, 418054 - 418100
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    |||||| || ||||||| |||||||||||||||||||||||| ||||    
T  418054 tcccaccaagtggggtcggctacatggatcaaattacgccataatgt 418100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Complemental strand, 2090675 - 2090629
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||| ||||||||| | |||||||||||||||||||||| ||||    
T  2090675 tcccactcaatggggtcgggtacatggatcaaattacgccataatgt 2090629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Original strand, 11069182 - 11069228
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||  |||||||||||| ||||||||||||||||||| ||||    
T  11069182 tcccactatgtggggtcagctatatggatcaaattacgccataatgt 11069228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Complemental strand, 12534474 - 12534428
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| |||||||| ||| ||||||||||||||||||| ||||    
T  12534474 tcccactaactggggtcaactaaatggatcaaattacgccataatgt 12534428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Complemental strand, 20457035 - 20456989
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| ||||||| |||||||||||||||| ||||||| ||||    
T  20457035 tcccactaagtggggtcggctacatggatcaaatgacgccataatgt 20456989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Original strand, 32442145 - 32442191
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| ||| ||| |||||||||||||||||||||||| ||||    
T  32442145 tcccactaagtggagtcggctacatggatcaaattacgccataatgt 32442191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Complemental strand, 38132598 - 38132552
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| ||||||| || ||||||||||||||||||||| ||||    
T  38132598 tcccactaagtggggtcggccacatggatcaaattacgccataatgt 38132552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Complemental strand, 42576272 - 42576226
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| | ||||| |||||||||||||||||||||||| ||||    
T  42576272 tcccactaagtcgggtcggctacatggatcaaattacgccattatgt 42576226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Original strand, 43423515 - 43423561
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    |||||||||| |||||  |||||||||||||||||||||||| ||||    
T  43423515 tcccactaaaaggggttggctacatggatcaaattacgccataatgt 43423561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 354 - 391
Target Start/End: Complemental strand, 28140 - 28103
Alignment:
Q  354 actaaatggggtcagctacatggatcaaattacgccat 391  Q
    |||||||||||||||||||||| ||||||||| |||||    
T  28140 actaaatggggtcagctacatgtatcaaattatgccat 28103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 408514 - 408555
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  408514 tcccactaagtggggtcggctacatggatcaaatgacgccat 408555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 2915516 - 2915557
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  2915516 tcccactaagtggggtcggctacatggatcaaatgacgccat 2915557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Complemental strand, 5558403 - 5558362
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||||| |||||    
T  5558403 tcccactaagtggggtcggctacatggatcaaattatgccat 5558362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Complemental strand, 9400773 - 9400732
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||||||||||| ||||| |||||||||| |||||||    
T  9400773 tcccactaaatggggtcggctacctggatcaaatgacgccat 9400732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 13561406 - 13561447
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  13561406 tcccactaagtggggtcggctacatggatcaaatgacgccat 13561447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Complemental strand, 29816644 - 29816603
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  29816644 tcccactaagtggggtcggctacatggatcaaatgacgccat 29816603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Complemental strand, 30213837 - 30213796
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  30213837 tcccactaagtggggtcggctacatggatcaaatgacgccat 30213796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Complemental strand, 38685229 - 38685188
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  38685229 tcccactaagtggggtcggctacatggatcaaatgacgccat 38685188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 39322099 - 39322140
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| |||| || ||||||||||||||||||||||||    
T  39322099 tcccactaagtgggatcggctacatggatcaaattacgccat 39322140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 382
Target Start/End: Original strand, 219480 - 219512
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaa 382  Q
    ||||||||||| |||||||||||||||||||||    
T  219480 tcccactaaatagggtcagctacatggatcaaa 219512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 385
Target Start/End: Original strand, 1001206 - 1001238
Alignment:
Q  353 cactaaatggggtcagctacatggatcaaatta 385  Q
    |||||||||||||| ||||||||||||||||||    
T  1001206 cactaaatggggtcggctacatggatcaaatta 1001238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 390
Target Start/End: Complemental strand, 14665974 - 14665934
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgcca 390  Q
    ||||||||| ||||||| ||||||| |||||||||||||||    
T  14665974 tcccactaagtggggtcggctacatagatcaaattacgcca 14665934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 381
Target Start/End: Complemental strand, 38830582 - 38830550
Alignment:
Q  349 ttcccactaaatggggtcagctacatggatcaa 381  Q
    |||||||||| ||||||||||||||||||||||    
T  38830582 ttcccactaagtggggtcagctacatggatcaa 38830550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000004; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 389
Target Start/End: Complemental strand, 15665363 - 15665324
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgcc 389  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  15665363 tcccactaagtggggtcagctacatggatcaaattacgcc 15665324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 349 - 396
Target Start/End: Complemental strand, 29399067 - 29399020
Alignment:
Q  349 ttcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    |||||||||| |||||||||||||||| ||||||||||||||| ||||    
T  29399067 ttcccactaagtggggtcagctacatgaatcaaattacgccataatgt 29399020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 350 - 396
Target Start/End: Original strand, 15661892 - 15661938
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| ||||||| |||||||||||||||||||||||| ||||    
T  15661892 tcccactaagtggggtcggctacatggatcaaattacgccataatgt 15661938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 350 - 396
Target Start/End: Complemental strand, 35690533 - 35690487
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| ||||||| |||||||||||||||||||||||| ||||    
T  35690533 tcccactaagtggggtcggctacatggatcaaattacgccataatgt 35690487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 23906317 - 23906358
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| |||||||||||||||||||||||| |||||||    
T  23906317 tcccactaagtggggtcagctacatggatcaaatgacgccat 23906358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 30634126 - 30634167
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| ||||||||||||||||||||||||    
T  30634126 tcccactaagtggggtcggctacatggatcaaattacgccat 30634167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 350 - 386
Target Start/End: Complemental strand, 25575086 - 25575050
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattac 386  Q
    ||||||||||||||||| |||||||||||||||||||    
T  25575086 tcccactaaatggggtctgctacatggatcaaattac 25575050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 349 - 396
Target Start/End: Complemental strand, 28467701 - 28467654
Alignment:
Q  349 ttcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||||  |||||| |||||||||||||||||||||||| ||||    
T  28467701 ttcccactaagcggggtccgctacatggatcaaattacgccataatgt 28467654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 391
Target Start/End: Original strand, 1965652 - 1965694
Alignment:
Q  349 ttcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||||||||| || ||||| ||||||||||||||||||    
T  1965652 ttcccactaaatgggatcggctacgtggatcaaattacgccat 1965694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 388
Target Start/End: Original strand, 7066519 - 7066557
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgc 388  Q
    |||||||||||||||||||||||||| ||||||| ||||    
T  7066519 tcccactaaatggggtcagctacatgaatcaaatgacgc 7066557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Original strand, 48174113 - 48174159
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| ||||||| |||||||||||||||| ||||||| ||||    
T  48174113 tcccactaagtggggtctgctacatggatcaaatgacgccataatgt 48174159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 362 - 396
Target Start/End: Complemental strand, 51438695 - 51438661
Alignment:
Q  362 gggtcagctacatggatcaaattacgccatgatgt 396  Q
    |||||||||||||||||||||||||||||| ||||    
T  51438695 gggtcagctacatggatcaaattacgccataatgt 51438661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Complemental strand, 4441115 - 4441074
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  4441115 tcccactaagtggggtcggctacatggatcaaatgacgccat 4441074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 19154883 - 19154924
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||||||| |||||||||||| |||||||    
T  19154883 tcccactaagtggggtcagctgcatggatcaaataacgccat 19154924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Complemental strand, 19969443 - 19969402
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  19969443 tcccactaagtggggtcggctacatggatcaaatgacgccat 19969402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 26037525 - 26037566
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||| |||||||||||    
T  26037525 tcccactaagtggggtcggctacatggatccaattacgccat 26037566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 27450200 - 27450241
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  27450200 tcccactaagtggggtcggctacatggatcaaatgacgccat 27450241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Complemental strand, 28486183 - 28486142
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    |||||||||  | |||||||||||||||||||||||||||||    
T  28486183 tcccactaaccgaggtcagctacatggatcaaattacgccat 28486142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 31959834 - 31959875
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  31959834 tcccactaagtggggtcggctacatggatcaaatgacgccat 31959875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 352 - 397
Target Start/End: Original strand, 38585273 - 38585318
Alignment:
Q  352 ccactaaatggggtcagctacatggatcaaattacgccatgatgtc 397  Q
    ||||||| |||| ||||||| ||||||||||||||||||| |||||    
T  38585273 ccactaagtgggctcagctaaatggatcaaattacgccataatgtc 38585318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 45209225 - 45209266
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| ||||||||||||||| ||||||||    
T  45209225 tcccactaagtggggtcggctacatggatcaaactacgccat 45209266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 49939754 - 49939795
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  49939754 tcccactaagtggggtcggctacatggatcaaatgacgccat 49939795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 50238635 - 50238676
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  50238635 tcccactaagtggggtcggctacatggatcaaatgacgccat 50238676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 50238721 - 50238762
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  50238721 tcccactaagtggggtcggctacatggatcaaatgacgccat 50238762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 52569535 - 52569576
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  52569535 tcccactaagtggggtcggctacatggatcaaatgacgccat 52569576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 387
Target Start/End: Complemental strand, 55008008 - 55007971
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacg 387  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  55008008 tcccactaagtggggtcggctacatggatcaaattacg 55007971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 386
Target Start/End: Complemental strand, 7947199 - 7947163
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattac 386  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  7947199 tcccactaagtggggtcggctacatggatcaaattac 7947163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 382
Target Start/End: Original strand, 49738570 - 49738602
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaa 382  Q
    ||||||||||||||||| |||||||||||||||    
T  49738570 tcccactaaatggggtcggctacatggatcaaa 49738602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 386
Target Start/End: Complemental strand, 50862893 - 50862857
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattac 386  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  50862893 tcccactaagtggggtcggctacatggatcaaattac 50862857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000004; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 349 - 396
Target Start/End: Complemental strand, 3481417 - 3481370
Alignment:
Q  349 ttcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    |||| ||||| |||||||||||||||||||||||||||||||| ||||    
T  3481417 ttccaactaagtggggtcagctacatggatcaaattacgccataatgt 3481370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 350 - 396
Target Start/End: Original strand, 887085 - 887131
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    |||||| || |||||||||||||||||||||||||||||||| ||||    
T  887085 tcccaccaagtggggtcagctacatggatcaaattacgccataatgt 887131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 350 - 396
Target Start/End: Original strand, 9531620 - 9531666
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| ||||||| |||||||||||||||||||||||| ||||    
T  9531620 tcccactaagtggggtcggctacatggatcaaattacgccataatgt 9531666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 350 - 396
Target Start/End: Complemental strand, 18959173 - 18959127
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| |||||||||||||||||||||||||| ||||| ||||    
T  18959173 tcccactaagtggggtcagctacatggatcaaattatgccataatgt 18959127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 12520082 - 12520123
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| ||||||||||||||||||||||||    
T  12520082 tcccactaagtggggtcggctacatggatcaaattacgccat 12520123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 39709221 - 39709262
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| ||||||||||||||||||||||||    
T  39709221 tcccactaagtggggtcggctacatggatcaaattacgccat 39709262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 43573150 - 43573191
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| ||||||||||||||||||||||||    
T  43573150 tcccactaagtggggtcggctacatggatcaaattacgccat 43573191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 352 - 396
Target Start/End: Original strand, 11992130 - 11992174
Alignment:
Q  352 ccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||| |||||||||||||||||||||||| ||||||| ||||    
T  11992130 ccactaagtggggtcagctacatggatcaaataacgccataatgt 11992174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Complemental strand, 440978 - 440932
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    |||| |||| ||| |||||||||||||||||||||||||||| ||||    
T  440978 tccctctaagtggagtcagctacatggatcaaattacgccataatgt 440932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Original strand, 3720435 - 3720481
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| ||||||| ||||||||||||||||||| |||| ||||    
T  3720435 tcccactaagtggggtcggctacatggatcaaattacaccataatgt 3720481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Complemental strand, 9496128 - 9496082
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| ||||||  |||||||||||||||||||||||| ||||    
T  9496128 tcccactaagtggggttggctacatggatcaaattacgccataatgt 9496082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Original strand, 13443928 - 13443974
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||||||||||| ||||||| |||||||| ||||||| ||||    
T  13443928 tcccactaaatggggtcggctacatcgatcaaatgacgccataatgt 13443974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Complemental strand, 33504486 - 33504440
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| ||||||| |||| ||||||||||||||||||| ||||    
T  33504486 tcccactaagtggggtcggctagatggatcaaattacgccataatgt 33504440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Original strand, 42549857 - 42549903
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| ||||||  |||||||| ||||||||||||||||||||    
T  42549857 tcccactaagtggggttggctacatgaatcaaattacgccatgatgt 42549903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Complemental strand, 227451 - 227410
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  227451 tcccactaagtggggtcggctacatggatcaaatgacgccat 227410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 451668 - 451709
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  451668 tcccactaagtggggtcggctacatggatcaaatgacgccat 451709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 3635343 - 3635384
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  3635343 tcccactaagtggggtcggctacatggatcaaatgacgccat 3635384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Complemental strand, 4807857 - 4807816
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  4807857 tcccactaagtggggtcggctacatggatcaaatgacgccat 4807816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 10516769 - 10516810
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| || | |||||||||||||||||||||||||||    
T  10516769 tcccactaagtgagatcagctacatggatcaaattacgccat 10516810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 12474947 - 12474988
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  12474947 tcccactaagtggggtcggctacatggatcaaatgacgccat 12474988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Complemental strand, 17670730 - 17670689
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  17670730 tcccactaagtggggtcggctacatggatcaaatgacgccat 17670689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Complemental strand, 28508940 - 28508899
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  28508940 tcccactaagtggggtcggctacatggatcaaatgacgccat 28508899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Complemental strand, 30306294 - 30306253
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  30306294 tcccactaagtggggtcggctacatggatcaaatgacgccat 30306253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 382
Target Start/End: Original strand, 12026032 - 12026064
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaa 382  Q
    ||||||||| |||||||||||||||||||||||    
T  12026032 tcccactaagtggggtcagctacatggatcaaa 12026064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 390
Target Start/End: Complemental strand, 25834940 - 25834900
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgcca 390  Q
    ||||||||| ||||||| |||||||||||||||| ||||||    
T  25834940 tcccactaagtggggtcggctacatggatcaaatgacgcca 25834900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 396
Target Start/End: Complemental strand, 38435212 - 38435168
Alignment:
Q  352 ccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||| |||| || |||||||||||||||||||||||| ||||    
T  38435212 ccactaagtgggatcggctacatggatcaaattacgccataatgt 38435168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000001; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 350 - 392
Target Start/End: Complemental strand, 38060976 - 38060934
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatg 392  Q
    ||||||||| ||||||| |||||||||||||||||||||||||    
T  38060976 tcccactaagtggggtcggctacatggatcaaattacgccatg 38060934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 350 - 396
Target Start/End: Original strand, 45374497 - 45374543
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| ||||||||||||||||||| |||||||||||| ||||    
T  45374497 tcccactaagtggggtcagctacatggattaaattacgccataatgt 45374543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 350 - 396
Target Start/End: Original strand, 48734167 - 48734213
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| |||||||||||||||||||||| ||||||||| ||||    
T  48734167 tcccactaagtggggtcagctacatggatcaacttacgccataatgt 48734213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 19676101 - 19676142
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| |||||||||||||||||||||||| |||||||    
T  19676101 tcccactaagtggggtcagctacatggatcaaatcacgccat 19676142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 391
Target Start/End: Complemental strand, 41530023 - 41529982
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| ||||||||||||||||||||||||    
T  41530023 tcccactaagtggggtcggctacatggatcaaattacgccat 41529982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 351 - 396
Target Start/End: Complemental strand, 46148289 - 46148244
Alignment:
Q  351 cccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    |||||||| ||||||| |||||||||||||||||||||||| ||||    
T  46148289 cccactaagtggggtcggctacatggatcaaattacgccataatgt 46148244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 391
Target Start/End: Complemental strand, 48508497 - 48508456
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| ||||||||||||||||||||||||    
T  48508497 tcccactaagtggggtcggctacatggatcaaattacgccat 48508456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 350 - 386
Target Start/End: Complemental strand, 29601154 - 29601118
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattac 386  Q
    ||||||||| |||||||||||||||||||||||||||    
T  29601154 tcccactaagtggggtcagctacatggatcaaattac 29601118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 353 - 396
Target Start/End: Complemental strand, 40991690 - 40991647
Alignment:
Q  353 cactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||    
T  40991690 cactaagtggggtcagctacatggatcaaattacaccataatgt 40991647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 349 - 396
Target Start/End: Original strand, 42510035 - 42510082
Alignment:
Q  349 ttcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||| |||| ||||||| |||||||||||||||||||||||| ||||    
T  42510035 ttccctctaagtggggtcggctacatggatcaaattacgccataatgt 42510082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Original strand, 24541352 - 24541398
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| ||||||| | |||||||||||||||||||||| ||||    
T  24541352 tcccactaagtggggtcgggtacatggatcaaattacgccataatgt 24541398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Original strand, 24778629 - 24778675
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| ||||||| ||||||||||||||||||| |||| ||||    
T  24778629 tcccactaagtggggtcggctacatggatcaaattacaccataatgt 24778675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 384
Target Start/End: Complemental strand, 34253722 - 34253688
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaatt 384  Q
    ||||||||||||||||| |||||||||||||||||    
T  34253722 tcccactaaatggggtcggctacatggatcaaatt 34253688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Complemental strand, 35420530 - 35420485
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||||||||||| |||||||||| ||||||||||||| ||||    
T  35420530 tcccactaaatggggtc-gctacatggaccaaattacgccataatgt 35420485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 398
Target Start/End: Complemental strand, 36304218 - 36304180
Alignment:
Q  360 tggggtcagctacatggatcaaattacgccatgatgtcc 398  Q
    ||||||| |||||||||||||||||||||||| ||||||    
T  36304218 tggggtcggctacatggatcaaattacgccataatgtcc 36304180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 391
Target Start/End: Original strand, 40273224 - 40273266
Alignment:
Q  349 ttcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    |||||||||| ||||||| |||||||||||||||| |||||||    
T  40273224 ttcccactaagtggggtcggctacatggatcaaatgacgccat 40273266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Original strand, 52927868 - 52927914
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccatgatgt 396  Q
    ||||||||| ||||||| |||||||||||||||||| ||||| ||||    
T  52927868 tcccactaagtggggtcggctacatggatcaaattatgccataatgt 52927914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Complemental strand, 5169094 - 5169053
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  5169094 tcccactaagtggggtcggctacatggatcaaatgacgccat 5169053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 12096725 - 12096766
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  12096725 tcccactaagtggggtcggctacatggatcaaatgacgccat 12096766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 383
Target Start/End: Complemental strand, 20208260 - 20208227
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaat 383  Q
    ||||||||||||||||| ||||||||||||||||    
T  20208260 tcccactaaatggggtcggctacatggatcaaat 20208227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Complemental strand, 25191639 - 25191598
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| |||| ||||||||||||||||||| |||||||    
T  25191639 tcccactaagtgggatcagctacatggatcaaatgacgccat 25191598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 40672387 - 40672428
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| || ||||||||||||||||||||||| |||||    
T  40672387 tcccactaagtgaggtcagctacatggatcaaattatgccat 40672428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 49503588 - 49503629
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| | ||||| ||||||||||||||||||||||||    
T  49503588 tcccactaagtagggtcggctacatggatcaaattacgccat 49503629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 52882682 - 52882723
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||  ||||||||||||||||||||||||    
T  52882682 tcccactaagtggggttggctacatggatcaaattacgccat 52882723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 49841868 - 49841832
Alignment:
Q  360 tggggtcagctacatggatcaaattacgccatgatgt 396  Q
    |||||||||||||||||||||||||| ||||| ||||    
T  49841868 tggggtcagctacatggatcaaattatgccataatgt 49841832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 390
Target Start/End: Original strand, 53214895 - 53214931
Alignment:
Q  354 actaaatggggtcagctacatggatcaaattacgcca 390  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  53214895 actaaatggggtcggctgcatggatcaaattacgcca 53214931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Complemental strand, 593 - 552
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  593 tcccactaagtggggtcggctacatggatcaaatgacgccat 552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 28909 - 28950
Alignment:
Q  350 tcccactaaatggggtcagctacatggatcaaattacgccat 391  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  28909 tcccactaagtggggtcggctacatggatcaaatgacgccat 28950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University